Pregenerated sensors for OLFR1446 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057817Ensembl transcript IDs: ENSMUST00000216805.3
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGCTTCGGAAAAGGAGGCAGGCTTTGTGGAAGGATCTGGAGGATaGGAGATCACATATTCAATCACAAACATTAGGGAGAGGAGAACC | + |
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Preference number: 1 (lower is better) Translates to: QASEKEAGFVEGSGG*EITYSITNIRERRT Trigger: GGTTCTCCTCTCCCTAATGTTTGTGATTGAATATGTGATCTCTCATCCTCCAGATCCTTCCACAAAGCCTGCCTCCTTTTCCGAAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR TCA 90 bp | GTCAGGACCAGATCATCAATTTTGATATCTGAGAGTGAGAATAGATaGATACTCCGGGCAAAGCTGGAGGAGAGGACAGGACAGAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: VRTRSSILISESENR*ILRAKLEERTGQRR Trigger: TCTTCTCTGTCCTGTCCTCTCCTCCAGCTTTGCCCGGAGTATTCATCTATTCTCACTCTCAGATATCAAAATTGATGATCTGGTCCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR CCA 90 bp | GAAGTTCATTATTACAGCAGGCTTCGGAAAAGGAGGCAGGCTTTGTaGAAGGATCTGGAGGATGAGAGATCACATATTCAATCACAAACA | + |
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Preference number: 1 (lower is better) Translates to: EVHYYSRLRKRRQAL*KDLEDERSHIQSQT Trigger: TGTTTGTGATTGAATATGTGATCTCTCATCCTCCAGATCCTTCCACAAAGCCTGCCTCCTTTTCCGAAGCCTGCTGTAATAATGAACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR CAA 90 bp | ATAGAAGTTCATTATTACAGCAGGCTTCGGAAAAGGAGGCAGGCTTaGTGGAAGGATCTGGAGGATGAGAGATCACATATTCAATCACAA | + |
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Preference number: 2 (lower is better) Translates to: IEVHYYSRLRKRRQA*WKDLEDERSHIQSQ Trigger: TTGTGATTGAATATGTGATCTCTCATCCTCCAGATCCTTCCACAAAGCCTGCCTCCTTTTCCGAAGCCTGCTGTAATAATGAACTTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGAGGCAGGCTTTGTGGAAGGATCTGGAGGATGAGAGATCACATATTCAAAGTTGGGAAGTATCATaGTATCCTGCCTTTAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: KRRQALWKDLEDERSHIQSWEVS*YPAFKL Trigger: AAGCTTAAAGGCAGGATATCATGATACTTCCCAACT...TTGAATATGTGATCTCTCATCCTCCAGATCCTTCCACAAAGCCTGCCTCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGAGGCAGGCTTTGTGGAAGGATCTGGAGGATGAGAGATCACATATTCAAAGTAATGCAGTGAAGTaGAGACATAAAATTGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: KRRQALWKDLEDERSHIQSNAVK*RHKIEH Trigger: GTGCTCAATTTTATGTCTTCACTTCACTGCATTACT...TTGAATATGTGATCTCTCATCCTCCAGATCCTTCCACAAAGCCTGCCTCCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR-3UTR CCA 90 bp | CCAAATACTTTAGTCGTTTTTAGAGTTCTCCTGAGAAACAGCATCAATAGGATAAAAGCATCAGGAAACTaGGTTATAGCCAACCTATAC | + |
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Preference number: 2 (lower is better) Translates to: PNTLVVFRVLLRNSINRIKASGN*VIANLY Trigger: GTATAGGTTGGCTATAACCCAGTTTCCTGATGCTTT...TATCCTATTGATGCTGTTTCTCAGGAGAACTCTAAAAACGACTAAAGTATTTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR-3UTR TCA 90 bp | TGCAATCAATTTAGACTTGAAGATCAAAGTCTAAAGCATCAGGAAACTGGGTTATTCATGTGCATATTATaGACACCTCCATGCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: CNQFRLEDQSLKHQETGLFMCIL*TPPCIS Trigger: AGAAATGCATGGAGGTGTTCATAATATGCACATGAA...TAACCCAGTTTCCTGATGCTTTAGACTTTGATCTTCAAGTCTAAATTGATTGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR CCA 72 bp | GGCTTCGGAAAAGGAGGCAGGCTTTGTGGAAGGATCTaGAGGATGAGAGATCACATATTCAATCACAAACAT | + |
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Preference number: 3 (lower is better) Translates to: GFGKGGRLCGRI*RMRDHIFNHKH Trigger: ATGTTTGTGATTGAATATGTGATCTCTCATCCTCCAGATCCTTCCACAAAGCCTGCCTCCTTTTCCGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR CCA 72 bp | TATTACAGCAGGCTTCGGAAAAGGAGGCAGGCTTTGTaGAAGGATCTGGAGGATGAGAGATCACATATTCAA | + |
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Preference number: 3 (lower is better) Translates to: YYSRLRKRRQAL*KDLEDERSHIQ Trigger: TTGAATATGTGATCTCTCATCCTCCAGATCCTTCCACAAAGCCTGCCTCCTTTTCCGAAGCCTGCTGTAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR TCA 72 bp | GAAAAGGAGGCAGGCTTTGTGGAAGGATCTGGAGGATaGGAGATCACATATTCAATCACAAACATTAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: EKEAGFVEGSGG*EITYSITNIRE Trigger: CTCCCTAATGTTTGTGATTGAATATGTGATCTCTCATCCTCCAGATCCTTCCACAAAGCCTGCCTCCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR TCA 72 bp | AGATCATCAATTTTGATATCTGAGAGTGAGAATAGATaGATACTCCGGGCAAAGCTGGAGGAGAGGACAGGA | + |
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Preference number: 3 (lower is better) Translates to: RSSILISESENR*ILRAKLEERTG Trigger: TCCTGTCCTCTCCTCCAGCTTTGCCCGGAGTATTCATCTATTCTCACTCTCAGATATCAAAATTGATGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR TCA 72 bp | TACTATCTAAAACTCTTCAATCAGCACCCCATCTGGTaGCCAACTGTTCAAATAGAAGACATTTCTCATCAA | + |
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Preference number: 3 (lower is better) Translates to: YYLKLFNQHPIW*PTVQIEDISHQ Trigger: TTGATGAGAAATGTCTTCTATTTGAACAGTTGGTCACCAGATGGGGTGCTGATTGAAGAGTTTTAGATAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| CDS-3UTR GCA 90 bp | AAAAGGAGGCAGGCTTTGTGGAAGGATCTGGAGGATGAGAGATCACATATTCAAATAAACAGGGGAAGCTaGATGCCTGGGTCATTGGTG | + |
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Preference number: 4 (lower is better) Translates to: KRRQALWKDLEDERSHIQINRGS*MPGSLV Trigger: CACCAATGACCCAGGCATGCAGCTTCCCCTGTTTAT...TTGAATATGTGATCTCTCATCCTCCAGATCCTTCCACAAAGCCTGCCTCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| 3UTR CAA 72 bp | CATTATTACAGCAGGCTTCGGAAAAGGAGGCAGGCTTaGTGGAAGGATCTGGAGGATGAGAGATCACATATT | + |
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Preference number: 4 (lower is better) Translates to: HYYSRLRKRRQA*WKDLEDERSHI Trigger: AATATGTGATCTCTCATCCTCCAGATCCTTCCACAAAGCCTGCCTCCTTTTCCGAAGCCTGCTGTAATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| CDS-3UTR CCA 90 bp | AAAAGGAGGCAGGCTTTGTGGAAGGATCTGGAGGATGAGAGATCACATATTCAAAATATGTCTGCAATATaGATGGAGGCACTCATGAAA | + |
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Preference number: 4 (lower is better) Translates to: KRRQALWKDLEDERSHIQNMSAI*MEALMK Trigger: TTTCATGAGTGCCTCCATCCATATTGCAGACATATT...TTGAATATGTGATCTCTCATCCTCCAGATCCTTCCACAAAGCCTGCCTCCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| CDS-3UTR TCA 90 bp | TGCAATCAATTTAGACTTGAAGATCAAAGTCTAAAGCATCAGGAAACTGGGTTATCATCACTGTGGGTGTaGCAGCTGAGGAGTAACAAA | + |
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Preference number: 4 (lower is better) Translates to: CNQFRLEDQSLKHQETGLSSLWV*QLRSNK Trigger: TTTGTTACTCCTCAGCTGTCACACCCACAGTGATGA...TAACCCAGTTTCCTGATGCTTTAGACTTTGATCTTCAAGTCTAAATTGATTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| CDS-3UTR TCA 90 bp | TGCAATCAATTTAGACTTGAAGATCAAAGTCTAAAGCATCAGGAAACTGGGTTATGTGGGTGTGACAGCTaGGGAGTAACAAAAATCAAC | + |
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Preference number: 4 (lower is better) Translates to: CNQFRLEDQSLKHQETGLCGCDS*GVTKIN Trigger: GTTGATTTTTGTTACTCCTCAGCTGTCACACCCACA...TAACCCAGTTTCCTGATGCTTTAGACTTTGATCTTCAAGTCTAAATTGATTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| CDS-3UTR TCA 90 bp | CCAAATACTTTAGTCGTTTTTAGAGTTCTCCTGAGAAACAGCATCAATAGGATAGATTATCAAAACAAGTaGGAGCCATTATTGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PNTLVVFRVLLRNSINRIDYQNK*EPLLQE Trigger: TTCCTGCAATAATGGCTCTCACTTGTTTTGATAATC...TATCCTATTGATGCTGTTTCTCAGGAGAACTCTAAAAACGACTAAAGTATTTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| CDS-3UTR CAA 90 bp | GCATATTCATGTGCATATTATGAACACCTCCATGCATTTCTCTGTTTGTGGTATTGCATGCCTGGGTCATaGGTGAGCCCCAGCAGAATG | + |
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Preference number: 5 (lower is better) Translates to: AYSCAYYEHLHAFLCLWYCMPGS*VSPSRM Trigger: CATTCTGCTGGGGCTCACCAATGACCCAGGCATGCA...ATACCACAAACAGAGAAATGCATGGAGGTGTTCATAATATGCACATGAATATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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| CDS-3UTR CAA 90 bp | AAAAGGAGGCAGGCTTTGTGGAAGGATCTGGAGGATGAGAGATCACATATTCAATGGATCACATTGGACTaGCAGAAGGAGAGAGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: KRRQALWKDLEDERSHIQWITLD*QKERVN Trigger: ATTTACTCTCTCCTTCTGCAAGTCCAATGTGATCCA...TTGAATATGTGATCTCTCATCCTCCAGATCCTTCCACAAAGCCTGCCTCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216805.3 |
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