Pregenerated sensors for OLFR1445 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045126Ensembl transcript IDs: ENSMUST00000049624.3
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS CCA 90 bp | AAGAGGAAGCTTTCTGTAGTTATAAAGCTTACAAAGAAGAAGAATTaGGTGCCACAAGCATTGTGTGTTATGGTTTTGTCTATTGAAAGG | + |
Preference number: 5 (lower is better) Translates to: KRKLSVVIKLTKKKN*VPQALCVMVLSIER Trigger: CCTTTCAATAGACAAAACCATAACACACAATGCTTGTGGCACCCAATTCTTCTTCTTTGTAAGCTTTATAACTACAGAAAGCTTCCTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049624.3 |
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CDS CAA 72 bp | AAGCTTACAAAGAAGAAGAATTGGGTGCCACAAGCATaGTGTGTTATGGTTTTGTCTATTGAAAGGAGACCT | + |
Preference number: 6 (lower is better) Translates to: KLTKKKNWVPQA*CVMVLSIERRP Trigger: AGGTCTCCTTTCAATAGACAAAACCATAACACACAATGCTTGTGGCACCCAATTCTTCTTCTTTGTAAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049624.3 |
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CDS CAA 90 bp | GTAGTTATAAAGCTTACAAAGAAGAAGAATTGGGTGCCACAAGCATaGTGTGTTATGGTTTTGTCTATTGAAAGGAGACCTGGCATTACT | + |
Preference number: 6 (lower is better) Translates to: VVIKLTKKKNWVPQA*CVMVLSIERRPGIT Trigger: AGTAATGCCAGGTCTCCTTTCAATAGACAAAACCATAACACACAATGCTTGTGGCACCCAATTCTTCTTCTTTGTAAGCTTTATAACTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049624.3 |
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CDS CCA 72 bp | CTTTCTGTAGTTATAAAGCTTACAAAGAAGAAGAATTaGGTGCCACAAGCATTGTGTGTTATGGTTTTGTCT | + |
Preference number: 6 (lower is better) Translates to: LSVVIKLTKKKN*VPQALCVMVLS Trigger: AGACAAAACCATAACACACAATGCTTGTGGCACCCAATTCTTCTTCTTTGTAAGCTTTATAACTACAGAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049624.3 |