Pregenerated sensors for OLFR1443 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045030Ensembl transcript IDs: ENSMUST00000049724.8, ENSMUST00000213486.2, ENSMUST00000215134.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACACATCCCACAGGCAGGCAACAGCTTTTGGGATAGCTACCCCCTaGCCTCCACTTCAGTTGTTCAAGACCCACATAAAGACCAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: NTSHRQATAFGIATP*PPLQLFKTHIKTKL Trigger: CAGCTTGGTCTTTATGTGGGTCTTGAACAACTGAAGTGGAGGGCAGGGGGTAGCTATCCCAAAAGCTGTTGCCTGCCTGTGGGATGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR GCA 90 bp | CACTGGGGAGAGGCAGGTAATGATGACATCCCATTTAGGTCTAAGTaGTTCAAAGTCTTTCACACTCTCTGCATTGTTCAATTGCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: HWGEAGNDDIPFRSK*FKVFHTLCIVQLQV Trigger: AACCTGCAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCACTTAGACCTAAATGGGATGTCATCATTACCTGCCTCTCCCCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR CCA 90 bp | TACCATAAGTTATGTGGAGAACTAATGACAAAGAAACCCAACCTCTaGCCCCTATATGTGTACCAGCATCCACACATACACCCTCACATA | + |
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Preference number: 1 (lower is better) Translates to: YHKLCGELMTKKPNL*PLYVYQHPHIHPHI Trigger: TATGTGAGGGTGTATGTGTGGATGCTGGTACACATATAGGGGCCAGAGGTTGGGTTTCTTTGTCATTAGTTCTCCACATAACTTATGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR TCA 90 bp | ACCATAGTCACTGTTGCTTTATATGTACATCAGTCCTGTTGTGTCTaGAAGTCATCCATCACCTTTGGCTCTTGTTATCTTTCTGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: TIVTVALYVHQSCCV*KSSITFGSCYLSAS Trigger: GGAGGCAGAAAGATAACAAGAGCCAAAGGTGATGGATGACTTTCAGACACAACAGGACTGATGTACATATAAAGCAACAGTGACTATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR TCA 90 bp | ATGTGTGTTCTTTGGTTGACTATGTTGTTCTTTTGGTTCAGACTCTaGAAGCCCCAAGGGTTCAGGTTAGTTGATTCTGTTGGTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: MCVLWLTMLFFWFRL*KPQGFRLVDSVGLP Trigger: AGGAAGACCAACAGAATCAACTAACCTGAACCCTTGGGGCTTTCAGAGTCTGAACCAAAAGAACAACATAGTCAACCAAAGAACACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR TCA 90 bp | GAAAAGATAAGGATATTGATTCTTGTACTTAACGTCAGTGTGTCCTaGAATCTCACAGGATACCTAGGGAAGCATGGAGCTGCATTACAG | + |
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Preference number: 1 (lower is better) Translates to: EKIRILILVLNVSVS*NLTGYLGKHGAALQ Trigger: CTGTAATGCAGCTCCATGCTTCCCTAGGTATCCTGTGAGATTTCAGGACACACTGACGTTAAGTACAAGAATCAATATCCTTATCTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR GCA 90 bp | GACATCCCATTTAGGTCTAAGTGCTTCAAAGTCTTTCACACTCTCTaGATTGTTCAATTGCAGGTTTCTGTAAATTGCCATTTACTACAA | + |
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Preference number: 1 (lower is better) Translates to: DIPFRSKCFKVFHTL*IVQLQVSVNCHLLQ Trigger: TTGTAGTAAATGGCAATTTACAGAAACCTGCAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCACTTAGACCTAAATGGGATGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR GCA 90 bp | GACATCCCATTTAGGTCTAAGTGCTTCAAAGTCTTTCACACTCTCTaGATTGTTCAATTGCAGGTTTCTGTAAATTGCCATTTACATACA | + |
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Preference number: 1 (lower is better) Translates to: DIPFRSKCFKVFHTL*IVQLQVSVNCHLHT Trigger: TGTATGTAAATGGCAATTTACAGAAACCTGCAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCACTTAGACCTAAATGGGATGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213486.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGACAAGGCCAGCCCAGATAGAAGAACACATCCCACAGGCAGGCAACAGCTGCTGGGATGTCATGTaGCTTGAACATATGCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: GQTRPAQIEEHIPQAGNSCWDVM*LEHMQS Trigger: GGACTGCATATGTTCAAGCCACATGACATCCCAGCA...GCTGTTGCCTGCCTGTGGGATGTGTTCTTCTATCTGGGCTGGCCTTGTCTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGACAAGGCCAGCCCAGATAGAAGAACACATCCCACAGGCAGGCAACAGCCTTATATGGGAGTCATaGAAGACTCCCAAGATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GQTRPAQIEEHIPQAGNSLIWES*KTPKMA Trigger: AGCCATCTTGGGAGTCTTCCATGACTCCCATATAAG...GCTGTTGCCTGCCTGTGGGATGTGTTCTTCTATCTGGGCTGGCCTTGTCTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR CAA 90 bp | CAGGCAACAGCTTTTGGGATAGCTACCCCCTGCCCTCCACTTCAGTaGTTCAAGACCCACATAAAGACCAAGCTGCGCATCTACTACTTA | + |
|
Preference number: 2 (lower is better) Translates to: QATAFGIATPCPPLQ*FKTHIKTKLRIYYL Trigger: TAAGTAGTAGATGCGCAGCTTGGTCTTTATGTGGGTCTTGAACAACTGAAGTGGAGGGCAGGGGGTAGCTATCCCAAAAGCTGTTGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGATTATGGGTTAGGGGTGGGAACTAGTGTCCTCTTCCCTTCAGAATGCGTCATCCATCACCTTTaGCTCTTGTTATCTTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: QTDYGLGVGTSVLFPSECVIHHL*LLLSFC Trigger: GCAGAAAGATAACAAGAGCCAAAGGTGATGGATGAC...GCATTCTGAAGGGAAGAGGACACTAGTTCCCACCCCTAACCCATAATCAGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR-3UTR GCA 90 bp | CAGACTGATTATGGGTTAGGGGTGGGAACTAGTGTCCTCTTCCCTTCAGAATGCGTCTTTCACACTCTCTaGATTGTTCAATTGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: QTDYGLGVGTSVLFPSECVFHTL*IVQLQV Trigger: AACCTGCAATTGAACAATGCAGAGAGTGTGAAAGAC...GCATTCTGAAGGGAAGAGGACACTAGTTCCCACCCCTAACCCATAATCAGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGCTGGGATGTCATGTGGCTTGAACATATGCAGTCCTTTCGCATGCTACCACTCAGAAGATGGAGGTaGATCTCAGAGAAAAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: ECWDVMWLEHMQSFRMLPLRRWR*ISEKSY Trigger: GTAACTTTTCTCTGAGATCCACCTCCATCTTCTGAG...TGGTAGCATGCGAAAGGACTGCATATGTTCAAGCCACATGACATCCCAGCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTTATATGTACATCAGTCCTGTTGTGTCTGAAAGTCATCCATCACCTTTGGTTCTATTTAGATCTCTaGGCACTGGGGAGAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: CFICTSVLLCLKVIHHLWFYLDL*ALGRGR Trigger: CCTGCCTCTCCCCAGTGCTCAGAGATCTAAATAGAA...CCAAAGGTGATGGATGACTTTCAGACACAACAGGACTGATGTACATATAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR CAA 90 bp | TACTACTTATGTGCAGGAAGGCCTAGGTCAAGCTATGTGTGTTCTTaGGTTGACTATGTTGTTCTTTTGGTTCAGACTCTGAAAGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: YYLCAGRPRSSYVCS*VDYVVLLVQTLKAP Trigger: TGGGGCTTTCAGAGTCTGAACCAAAAGAACAACATAGTCAACCAAAGAACACACATAGCTTGACCTAGGCCTTCCTGCACATAAGTAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGATTATGGGTTAGGGGTGGGAACTAGTGTCCTCTTCCCTTCAGAATGCCATGAAGACCTAAGTTaGAATTCTCATAAATACCAC | + |
|
Preference number: 2 (lower is better) Translates to: QTDYGLGVGTSVLFPSECHEDLS*NSHKYH Trigger: GTGGTATTTATGAGAATTCCAACTTAGGTCTTCATG...GCATTCTGAAGGGAAGAGGACACTAGTTCCCACCCCTAACCCATAATCAGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR CAA 90 bp | ACCAAAATAACAAGGAGGGCAGGGCAGATAACAAAGCTTACAAGTTaGCATCTCACTGATGTGGCTATCAGAGCAAGAATGAATCATGAC | + |
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Preference number: 2 (lower is better) Translates to: TKITRRAGQITKLTS*HLTDVAIRARMNHD Trigger: GTCATGATTCATTCTTGCTCTGATAGCCACATCAGTGAGATGCAAACTTGTAAGCTTTGTTATCTGCCCTGCCCTCCTTGTTATTTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCAAGACCCACATAAAGACCAAGCTGCGCATCTACTACTTATGTGCAGGAAGAGCAAGAATGAATCATaGCTTCTGGATCATAACAGA | + |
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Preference number: 2 (lower is better) Translates to: VQDPHKDQAAHLLLMCRKSKNES*LLDHNR Trigger: TCTGTTATGATCCAGAAGTCATGATTCATTCTTGCT...CTTCCTGCACATAAGTAGTAGATGCGCAGCTTGGTCTTTATGTGGGTCTTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR CAA 90 bp | GCATGCTACCATAGTCACTGTTGCTTTATATGTACATCAGTCCTGTaGTGTCTGAAAGTCATCCATCACCTTTGGCTCTTGTTATCTTTC | + |
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Preference number: 2 (lower is better) Translates to: ACYHSHCCFICTSVL*CLKVIHHLWLLLSF Trigger: GAAAGATAACAAGAGCCAAAGGTGATGGATGACTTTCAGACACAACAGGACTGATGTACATATAAAGCAACAGTGACTATGGTAGCATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR-3UTR TCA 90 bp | AAGACTCCCAAGATGGCTAGCCCTTGTTTAAGCAGAGAAGTGAATGTAGTGAAGGTGAGTGACAAGAGATaGCACAACTTTATTAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: KTPKMASPCLSREVNVVKVSDKR*HNFISD Trigger: ATCACTAATAAAGTTGTGTCATCTCTTGTCACTCAC...CTTCACTACATTCACTTCTCTGCTTAAACAAGGGCTAGCCATCTTGGGAGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR-3UTR CCA 90 bp | ATAACAAAGCTTACAAGTTTGCATCTCACTGATGTGGCTATCAGAGCAAGAATGCCAGAACTCAGAAGATaGAGGTGGATCTCAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ITKLTSLHLTDVAIRARMPELRR*RWISEK Trigger: TTTCTCTGAGATCCACCTCCATCTTCTGAGTTCTGG...CATTCTTGCTCTGATAGCCACATCAGTGAGATGCAAACTTGTAAGCTTTGTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTGTTTTACTTATCCACTTTACATCTTGCTCACTGCCCCTCTCCTCGTCACAATAATGTCACATAAATaGCAACATAGGGGCCCATTA | + |
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Preference number: 2 (lower is better) Translates to: ICFTYPLYILLTAPLLVTIMSHK*QHRGPL Trigger: TAATGGGCCCCTATGTTGTCATTTATGTGACATTAT...TGTGACGAGGAGAGGGGCAGTGAGCAAGATGTAAAGTGGATAAGTAAAACAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR-3UTR TCA 90 bp | TACCAAAATAACAAGGAGGGCAGGGCAGATAACAAAGCTTACAAGTTTGCATCTCTATCAGAGCAAGAATaGATCATGACTTCTGGATCA | + |
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Preference number: 2 (lower is better) Translates to: YQNNKEGRADNKAYKFASLSEQE*IMTSGS Trigger: TGATCCAGAAGTCATGATTCATTCTTGCTCTGATAG...AGATGCAAACTTGTAAGCTTTGTTATCTGCCCTGCCCTCCTTGTTATTTTGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTATATGTACATCAGTCCTGTTGTGTCTGAAAGTCATCCATCACCTTTGGGTCTTTCACACTCTCTaGATTGTTCAATTGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: CFICTSVLLCLKVIHHLWVFHTL*IVQLQV Trigger: AACCTGCAATTGAACAATGCAGAGAGTGTGAAAGAC...CCAAAGGTGATGGATGACTTTCAGACACAACAGGACTGATGTACATATAAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR CAA 90 bp | TTGCAGGTTTCTGTAAATTGCCATTTACTACAAGAAGAAACAGTTTaGATGAGGGCTGATCAAGGTCCTGATGTATGTCATCAGGAATCA | + |
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Preference number: 2 (lower is better) Translates to: LQVSVNCHLLQEETV*MRADQGPDVCHQES Trigger: TGATTCCTGATGACATACATCAGGACCTTGATCAGCCCTCATCAAAACTGTTTCTTCTTGTAGTAAATGGCAATTTACAGAAACCTGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTAGGTCTAAGTGCTTCAAAGTCTTTCACACTCTCTGCATTGTTCAATTGCCTATCAGAGCAAGAATaGATCATGACTTCTGGATCA | + |
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Preference number: 2 (lower is better) Translates to: HLGLSASKSFTLSALFNCLSEQE*IMTSGS Trigger: TGATCCAGAAGTCATGATTCATTCTTGCTCTGATAG...GCAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCACTTAGACCTAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTAGGTCTAAGTGCTTCAAAGTCTTTCACACTCTCTGCATTGTTCAATTGCAGCAAGAATGAATCATaGCTTCTGGATCATAACAGA | + |
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Preference number: 2 (lower is better) Translates to: HLGLSASKSFTLSALFNCSKNES*LLDHNR Trigger: TCTGTTATGATCCAGAAGTCATGATTCATTCTTGCT...GCAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCACTTAGACCTAAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTTGGTCTTCCTGTGAAACAACTGAGAATTTTAACAAGAGACAAGATGAACTCAGAAGATGGAGGTaGATCTCAGAGAAAAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: FCWSSCETTENFNKRQDELRRWR*ISEKSY Trigger: GTAACTTTTCTCTGAGATCCACCTCCATCTTCTGAG...TTCATCTTGTCTCTTGTTAAAATTCTCAGTTGTTTCACAGGAAGACCAACAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTATATGTACATCAGTCCTGTTGTGTCTGAAAGTCATCCATCACCTTTGGCATGAAGACCTAAGTTaGAATTCTCATAAATACCAC | + |
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Preference number: 2 (lower is better) Translates to: CFICTSVLLCLKVIHHLWHEDLS*NSHKYH Trigger: GTGGTATTTATGAGAATTCCAACTTAGGTCTTCATG...CCAAAGGTGATGGATGACTTTCAGACACAACAGGACTGATGTACATATAAAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR CAA 90 bp | AGGTCTAAGTGCTTCAAAGTCTTTCACACTCTCTGCATTGTTCAATaGCAGGTTTCTGTAAATTGCCATTTACTACAAGAAGAAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: RSKCFKVFHTLCIVQ*QVSVNCHLLQEETV Trigger: AACTGTTTCTTCTTGTAGTAAATGGCAATTTACAGAAACCTGCAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCACTTAGACCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR CAA 90 bp | AGGTCTAAGTGCTTCAAAGTCTTTCACACTCTCTGCATTGTTCAATaGCAGGTTTCTGTAAATTGCCATTTACATACACAAATGCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: RSKCFKVFHTLCIVQ*QVSVNCHLHTQMQK Trigger: TTTTTGCATTTGTGTATGTAAATGGCAATTTACAGAAACCTGCAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCACTTAGACCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213486.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTTGGTCTTCCTGTGAAACAACTGAGAATTTTAACAAGAGACAAGATGAATACCATAGTCACTGTTaGTTTATATGTACATCAGTC | + |
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Preference number: 2 (lower is better) Translates to: FCWSSCETTENFNKRQDEYHSHC*FICTSV Trigger: GACTGATGTACATATAAAGCAACAGTGACTATGGTA...TTCATCTTGTCTCTTGTTAAAATTCTCAGTTGTTTCACAGGAAGACCAACAGAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR TCA 72 bp | AATGTCCATGCAGGGGAGCTGCAAGCTCAAGTTTTCTaGAGTAGGGATGTGGGTGCAGCTGGGAAGACCATC | + |
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Preference number: 3 (lower is better) Translates to: NVHAGELQAQVF*SRDVGAAGKTI Trigger: GATGGTCTTCCCAGCTGCACCCACATCCCTACTTCAGAAAACTTGAGCTTGCAGCTCCCCTGCATGGACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR TCA 72 bp | TTCTGCCTCTGTGAGGTTAGGTGCATCCTTTCCCACTaGGGTCAGACAAGGCCAGCCCAGATAGAAGAACAC | + |
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Preference number: 3 (lower is better) Translates to: FCLCEVRCILSH*GQTRPAQIEEH Trigger: GTGTTCTTCTATCTGGGCTGGCCTTGTCTGACCTCAGTGGGAAAGGATGCACCTAACCTCACAGAGGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR GCA 72 bp | CACAGGCAGGCAACAGCTTTTGGGATAGCTACCCCCTaGCCTCCACTTCAGTTGTTCAAGACCCACATAAAG | + |
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Preference number: 3 (lower is better) Translates to: HRQATAFGIATP*PPLQLFKTHIK Trigger: CTTTATGTGGGTCTTGAACAACTGAAGTGGAGGGCAGGGGGTAGCTATCCCAAAAGCTGTTGCCTGCCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR CCA 72 bp | GGGAGCTGCAAGCTCAAGTTTTCTGAAGTAGGGATGTaGGTGCAGCTGGGAAGACCATCAAGGGGATCAGTA | + |
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Preference number: 3 (lower is better) Translates to: GSCKLKFSEVGM*VQLGRPSRGSV Trigger: TACTGATCCCCTTGATGGTCTTCCCAGCTGCACCCACATCCCTACTTCAGAAAACTTGAGCTTGCAGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR CCA 72 bp | ATAGAAGAACACATCCCACAGGCAGGCAACAGCTTTTaGGATAGCTACCCCCTGCCCTCCACTTCAGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: IEEHIPQAGNSF*DSYPLPSTSVV Trigger: AACAACTGAAGTGGAGGGCAGGGGGTAGCTATCCCAAAAGCTGTTGCCTGCCTGTGGGATGTGTTCTTCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR GCA 72 bp | TTAGGGGTGGGAACTAGTGTCCTCTTCCCTTCAGAATaGTGGGATGTCATGTGGCTTGAACATATGCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: LGVGTSVLFPSE*WDVMWLEHMQS Trigger: GGACTGCATATGTTCAAGCCACATGACATCCCAGCATTCTGAAGGGAAGAGGACACTAGTTCCCACCCCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR CCA 72 bp | GGGGTGGGAACTAGTGTCCTCTTCCCTTCAGAATGCTaGGATGTCATGTGGCTTGAACATATGCAGTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: GVGTSVLFPSEC*DVMWLEHMQSF Trigger: AAAGGACTGCATATGTTCAAGCCACATGACATCCCAGCATTCTGAAGGGAAGAGGACACTAGTTCCCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR-3UTR CAA 90 bp | GGTCAGACAAGGCCAGCCCAGATAGAAGAACACATCCCACAGGCAGGCAACAGCTCATGGGCTTTTATTTaGCCTCTCAGTTTACATGTA | + |
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Preference number: 3 (lower is better) Translates to: GQTRPAQIEEHIPQAGNSSWAFI*PLSLHV Trigger: TACATGTAAACTGAGAGGCAAAATAAAAGCCCATGA...GCTGTTGCCTGCCTGTGGGATGTGTTCTTCTATCTGGGCTGGCCTTGTCTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR-3UTR CAA 90 bp | GGTCAGACAAGGCCAGCCCAGATAGAAGAACACATCCCACAGGCAGGCAACAGCGCAGGTTTCTGTAAATaGCCATTTACTACAAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: GQTRPAQIEEHIPQAGNSAGFCK*PFTTRR Trigger: TCTTCTTGTAGTAAATGGCAATTTACAGAAACCTGC...GCTGTTGCCTGCCTGTGGGATGTGTTCTTCTATCTGGGCTGGCCTTGTCTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| 3UTR TCA 72 bp | CCTCTTCCCTTCAGAATGCTGGGATGTCATGTGGCTTaGACATATGCAGTCCTTTCGCATGCTACCATAGTC | + |
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Preference number: 3 (lower is better) Translates to: PLPFRMLGCHVA*TYAVLSHATIV Trigger: GACTATGGTAGCATGCGAAAGGACTGCATATGTTCAAGCCACATGACATCCCAGCATTCTGAAGGGAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| 3UTR CCA 72 bp | TGTGTCCTGAAATCTCACAGGATACCTAGGGAAGCATaGAGCTGCATTACAGTGCACCACACAATGCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: CVLKSHRIPREA*SCITVHHTMLD Trigger: GTCTAGCATTGTGTGGTGCACTGTAATGCAGCTCCATGCTTCCCTAGGTATCCTGTGAGATTTCAGGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR CCA 72 bp | AGTGTCCTCTTCCCTTCAGAATGCTGGGATGTCATGTaGCTTGAACATATGCAGTCCTTTCGCATGCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: SVLFPSECWDVM*LEHMQSFRMLP Trigger: TGGTAGCATGCGAAAGGACTGCATATGTTCAAGCCACATGACATCCCAGCATTCTGAAGGGAAGAGGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR GCA 72 bp | CTTCAGAATGCTGGGATGTCATGTGGCTTGAACATATaGAGTCCTTTCGCATGCTACCATAGTCACTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LQNAGMSCGLNI*SPFACYHSHCC Trigger: GCAACAGTGACTATGGTAGCATGCGAAAGGACTGCATATGTTCAAGCCACATGACATCCCAGCATTCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR CCA 72 bp | TTATGTGGAGAACTAATGACAAAGAAACCCAACCTCTaGCCCCTATATGTGTACCAGCATCCACACATACAC | + |
|
Preference number: 3 (lower is better) Translates to: LCGELMTKKPNL*PLYVYQHPHIH Trigger: GTGTATGTGTGGATGCTGGTACACATATAGGGGCCAGAGGTTGGGTTTCTTTGTCATTAGTTCTCCACATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
||
| 3UTR CCA 72 bp | AATAGGAAGGAAAGTGACTGTCTTATATGGGAGTCATaGAAGACTCCCAAGATGGCTAGCCCTTGTTTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: NRKESDCLIWES*KTPKMASPCLS Trigger: GCTTAAACAAGGGCTAGCCATCTTGGGAGTCTTCCATGACTCCCATATAAGACAGTCACTTTCCTTCCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
||
| 3UTR TCA 72 bp | AGGATATTGATTCTTGTACTTAACGTCAGTGTGTCCTaGAATCTCACAGGATACCTAGGGAAGCATGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RILILVLNVSVS*NLTGYLGKHGA Trigger: AGCTCCATGCTTCCCTAGGTATCCTGTGAGATTTCAGGACACACTGACGTTAAGTACAAGAATCAATATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR TCA 72 bp | CTTTGGTTGACTATGTTGTTCTTTTGGTTCAGACTCTaGAAGCCCCAAGGGTTCAGGTTAGTTGATTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LWLTMLFFWFRL*KPQGFRLVDSV Trigger: AACAGAATCAACTAACCTGAACCCTTGGGGCTTTCAGAGTCTGAACCAAAAGAACAACATAGTCAACCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTTATATGTACATCAGTCCTGTTGTGTCTGAAAGTCATCCATCACCTTTGGCTCTGCATTGTTCAATaGCAGGTTTCTGTAAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: CFICTSVLLCLKVIHHLWLCIVQ*QVSVNC Trigger: GCAATTTACAGAAACCTGCAATTGAACAATGCAGAG...CCAAAGGTGATGGATGACTTTCAGACACAACAGGACTGATGTACATATAAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR GCA 72 bp | ATATGCAGTCCTTTCGCATGCTACCATAGTCACTGTTaGTTTATATGTACATCAGTCCTGTTGTGTCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ICSPFACYHSHC*FICTSVLLCLK Trigger: TTTCAGACACAACAGGACTGATGTACATATAAAGCAACAGTGACTATGGTAGCATGCGAAAGGACTGCATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR TCA 72 bp | ACTGTTGCTTTATATGTACATCAGTCCTGTTGTGTCTaGAAGTCATCCATCACCTTTGGCTCTTGTTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: TVALYVHQSCCV*KSSITFGSCYL Trigger: AAGATAACAAGAGCCAAAGGTGATGGATGACTTTCAGACACAACAGGACTGATGTACATATAAAGCAACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAACAAAGCTTACAAGTTTGCATCTCACTGATGTGGCTATCAGAGCAAGAATGTCATGGGCTTTTATTTaGCCTCTCAGTTTACATGTA | + |
|
Preference number: 3 (lower is better) Translates to: ITKLTSLHLTDVAIRARMSWAFI*PLSLHV Trigger: TACATGTAAACTGAGAGGCAAAATAAAAGCCCATGA...CATTCTTGCTCTGATAGCCACATCAGTGAGATGCAAACTTGTAAGCTTTGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTTAGGTCTAAGTGCTTCAAAGTCTTTCACACTCTCTGCATTGTTCAATTGCAAGAGGATAAAGCACTaGTTATACAAGCATGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: HLGLSASKSFTLSALFNCKRIKH*LYKHED Trigger: GTCTTCATGCTTGTATAACAAGTGCTTTATCCTCTT...GCAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCACTTAGACCTAAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGTTGGTCTTCCTGTGAAACAACTGAGAATTTTAACAAGAGACAAGATGAAAGTCATCCATCACCTTaGGCTCTTGTTATCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: FCWSSCETTENFNKRQDESHPSP*ALVIFL Trigger: CAGAAAGATAACAAGAGCCAAAGGTGATGGATGACT...TTCATCTTGTCTCTTGTTAAAATTCTCAGTTGTTTCACAGGAAGACCAACAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR GCA 72 bp | TTTAGGTCTAAGTGCTTCAAAGTCTTTCACACTCTCTaGATTGTTCAATTGCAGGTTTCTGTAAATTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FRSKCFKVFHTL*IVQLQVSVNCH Trigger: ATGGCAATTTACAGAAACCTGCAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCACTTAGACCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTATGTGTGTTCTTTGGTTGACTATGTTGTTCTTTTGGTTCAGACTCTGAAATCATGGGCTTTTATTTaGCCTCTCAGTTTACATGTA | + |
|
Preference number: 3 (lower is better) Translates to: SYVCSLVDYVVLLVQTLKSWAFI*PLSLHV Trigger: TACATGTAAACTGAGAGGCAAAATAAAAGCCCATGA...TTTCAGAGTCTGAACCAAAAGAACAACATAGTCAACCAAAGAACACACATAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR GCA 72 bp | GTTTTGTGTTGGGTAGCTAGTACTGAGTATCAGGAATaGTCTGATATATTGTTAATATATCCAGTCAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: VLCWVASTEYQE*SDILLIYPVRF Trigger: AAATCTGACTGGATATATTAACAATATATCAGAGCATTCCTGATACTCAGTACTAGCTACCCAACACAAAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR CCA 72 bp | TTTGATTTCTATCCCTCAATAAATACACCAAGAATATaGACATGTGTGTTTGAACCTGCATCCATTAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FDFYPSINTPRI*TCVFEPASIKG Trigger: TCCTTTAATGGATGCAGGTTCAAACACACATGTCCATATTCTTGGTGTATTTATTGAGGGATAGAAATCAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
||
| CDS-3UTR CCA 90 bp | GTGCATCCTTTCCCACTGAGGTCAGACAAGGCCAGCCCAGATAGAAGAACACATGAACAGGATAAAGAGTaGGGTCTGCAGTGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VHPFPLRSDKASPDRRTHEQDKE*GLQCWG Trigger: GCCCCAGCACTGCAGACCCCACTCTTTATCCTGTTC...ATGTGTTCTTCTATCTGGGCTGGCCTTGTCTGACCTCAGTGGGAAAGGATGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR CAA 72 bp | GCTTTTGGGATAGCTACCCCCTGCCCTCCACTTCAGTaGTTCAAGACCCACATAAAGACCAAGCTGCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: AFGIATPCPPLQ*FKTHIKTKLRI Trigger: GATGCGCAGCTTGGTCTTTATGTGGGTCTTGAACAACTGAAGTGGAGGGCAGGGGGTAGCTATCCCAAAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAGACAAGGCCAGCCCAGATAGAAGAACACATCCCACAGGCAGGCAACAGCAGTGATGGACCACATTaGACTTGCAGAAGTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQTRPAQIEEHIPQAGNSSDGPH*TCRSRV Trigger: GACTCTACTTCTGCAAGTCCAATGTGGTCCATCACT...GCTGTTGCCTGCCTGTGGGATGTGTTCTTCTATCTGGGCTGGCCTTGTCTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGTCCTGAAATCTCACAGGATACCTAGGGAAGCATGGAGCTGCATTACAGAACAGGATAAAGAGTaGGGTCTGCAGTGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QCVLKSHRIPREAWSCITEQDKE*GLQCWG Trigger: GCCCCAGCACTGCAGACCCCACTCTTTATCCTGTTC...TGTAATGCAGCTCCATGCTTCCCTAGGTATCCTGTGAGATTTCAGGACACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAGACAAGGCCAGCCCAGATAGAAGAACACATCCCACAGGCAGGCAACAGCACATGCACATGTAGTTaGAGTCATAGTGGTGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: GQTRPAQIEEHIPQAGNSTCTCS*SHSGGI Trigger: TATACCACCACTATGACTCCAACTACATGTGCATGT...GCTGTTGCCTGCCTGTGGGATGTGTTCTTCTATCTGGGCTGGCCTTGTCTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGGGCAGATAACAAAGCTTACAAGTTTGCATCTCACTGATGTGGCTATCATAAAGAGTGGGGTCTaGAGTGCTGGGGCATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RAGQITKLTSLHLTDVAIIKSGV*SAGALV Trigger: GACCAATGCCCCAGCACTGCAGACCCCACTCTTTAT...GATAGCCACATCAGTGAGATGCAAACTTGTAAGCTTTGTTATCTGCCCTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGACCCACATAAAGACCAAGCTGCGCATCTACTACTTATGTGCAGGAAGATAAAGAGTGGGGTCTaGAGTGCTGGGGCATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VQDPHKDQAAHLLLMCRKIKSGV*SAGALV Trigger: GACCAATGCCCCAGCACTGCAGACCCCACTCTTTAT...CTTCCTGCACATAAGTAGTAGATGCGCAGCTTGGTCTTTATGTGGGTCTTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAGACAAGGCCAGCCCAGATAGAAGAACACATCCCACAGGCAGGCAACAGCAAGCATTGTAGGAAATaGCTTGGTTTCCTACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GQTRPAQIEEHIPQAGNSKHCRK*LGFLQE Trigger: TTCTTGTAGGAAACCAAGCCATTTCCTACAATGCTT...GCTGTTGCCTGCCTGTGGGATGTGTTCTTCTATCTGGGCTGGCCTTGTCTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR GCA 90 bp | AAGAACACATCCCACAGGCAGGCAACAGCTTTTGGGATAGCTACCCCCTGCCCTCAAAATAACAAGGAGTaGAGAACAGATGACAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KNTSHRQATAFGIATPCPQNNKE*RTDDKT Trigger: AGTTTTGTCATCTGTTCTGCACTCCTTGTTATTTTG...AGGGCAGGGGGTAGCTATCCCAAAAGCTGTTGCCTGCCTGTGGGATGTGTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR TCA 90 bp | GTGCATGCCCATGCGTTCACAAGTAGATCTTCTTCTCATGGGCTTTTATTTTGCTCACACCTAGAAGAATaGACTCTGTCACCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHAHAFTSRSSSHGLLFCSHLEE*TLSPLS Trigger: GGACAGAGGTGACAGAGTTCATTCTTCTAGGTGTGA...GCAAAATAAAAGCCCATGAGAAGAAGATCTACTTGTGAACGCATGGGCATGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGAAGGCCTAGGTCAAGCTATGTGTGTTCTTTGGTTGACTATGTTGTTCTTTCACACCTAGAAGAATaGACTCTGTCACCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGRPRSSYVCSLVDYVVLSHLEE*TLSPLS Trigger: GGACAGAGGTGACAGAGTTCATTCTTCTAGGTGTGA...AAGAACAACATAGTCAACCAAAGAACACACATAGCTTGACCTAGGCCTTCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR TCA 90 bp | ATTTGTTTTACTTATCCACTTTACATCTTGCTCACTGCCCCTCTCCTCGTCACATCACACCTAGAAGAATaGACTCTGTCACCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICFTYPLYILLTAPLLVTSHLEE*TLSPLS Trigger: GGACAGAGGTGACAGAGTTCATTCTTCTAGGTGTGA...TGTGACGAGGAGAGGGGCAGTGAGCAAGATGTAAAGTGGATAAGTAAAACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR CAA 72 bp | TGTGCAGGAAGGCCTAGGTCAAGCTATGTGTGTTCTTaGGTTGACTATGTTGTTCTTTTGGTTCAGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CAGRPRSSYVCS*VDYVVLLVQTL Trigger: CAGAGTCTGAACCAAAAGAACAACATAGTCAACCAAAGAACACACATAGCTTGACCTAGGCCTTCCTGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTTGTGTCTGAAAGTCATCCATCACCTTTGGCTCTTGTTATCTTTCTGCCTGGAGTGCAGAACAGATaGCAAAACTTGCTCCATATA | + |
|
Preference number: 4 (lower is better) Translates to: PVVSESHPSPLALVIFLPGVQNR*QNLLHI Trigger: TATATGGAGCAAGTTTTGTCATCTGTTCTGCACTCC...AGGCAGAAAGATAACAAGAGCCAAAGGTGATGGATGACTTTCAGACACAACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR GCA 90 bp | AGCTATGTGTGTTCTTTGGTTGACTATGTTGTTCTTTTGGTTCAGACTCTGAAAATAAAGAGTGGGGTCTaGAGTGCTGGGGCATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SYVCSLVDYVVLLVQTLKIKSGV*SAGALV Trigger: GACCAATGCCCCAGCACTGCAGACCCCACTCTTTAT...TTTCAGAGTCTGAACCAAAAGAACAACATAGTCAACCAAAGAACACACATAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR CAA 72 bp | AGCTATGTGTGTTCTTTGGTTGACTATGTTGTTCTTTaGGTTCAGACTCTGAAAGCCCCAAGGGTTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SYVCSLVDYVVL*VQTLKAPRVQV Trigger: AACCTGAACCCTTGGGGCTTTCAGAGTCTGAACCAAAAGAACAACATAGTCAACCAAAGAACACACATAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCTATTTAGATCTCTGAGCACTGGGGAGAGGCAGGTAATGATGACATCCCAAAATAACAAGGAGTaGAGAACAGATGACAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PLLFRSLSTGERQVMMTSQNNKE*RTDDKT Trigger: AGTTTTGTCATCTGTTCTGCACTCCTTGTTATTTTG...GGATGTCATCATTACCTGCCTCTCCCCAGTGCTCAGAGATCTAAATAGAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR CAA 72 bp | ATCAGTCCTGTTGTGTCTGAAAGTCATCCATCACCTTaGGCTCTTGTTATCTTTCTGCCTCCTCTTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: ISPVVSESHPSP*ALVIFLPPLLF Trigger: AAATAGAAGAGGAGGCAGAAAGATAACAAGAGCCAAAGGTGATGGATGACTTTCAGACACAACAGGACTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR CAA 72 bp | CATAGTCACTGTTGCTTTATATGTACATCAGTCCTGTaGTGTCTGAAAGTCATCCATCACCTTTGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSHCCFICTSVL*CLKVIHHLWLL Trigger: CAAGAGCCAAAGGTGATGGATGACTTTCAGACACAACAGGACTGATGTACATATAAAGCAACAGTGACTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGAAGGCCTAGGTCAAGCTATGTGTGTTCTTTGGTTGACTATGTTGTTCTTAAGCATTGTAGGAAATaGCTTGGTTTCCTACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGRPRSSYVCSLVDYVVLKHCRK*LGFLQE Trigger: TTCTTGTAGGAAACCAAGCCATTTCCTACAATGCTT...AAGAACAACATAGTCAACCAAAGAACACACATAGCTTGACCTAGGCCTTCCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR CCA 90 bp | ATAACAAAGCTTACAAGTTTGCATCTCACTGATGTGGCTATCAGAGCAAGAATGAGTGATGGACCACATTaGACTTGCAGAAGTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITKLTSLHLTDVAIRARMSDGPH*TCRSRV Trigger: GACTCTACTTCTGCAAGTCCAATGTGGTCCATCACT...CATTCTTGCTCTGATAGCCACATCAGTGAGATGCAAACTTGTAAGCTTTGTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
||
| CDS-3UTR CCA 90 bp | TGCTACCATAGTCACTGTTGCTTTATATGTACATCAGTCCTGTTGTGTCTGAAAAGTGATGGACCACATTaGACTTGCAGAAGTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CYHSHCCFICTSVLLCLKSDGPH*TCRSRV Trigger: GACTCTACTTCTGCAAGTCCAATGTGGTCCATCACT...TTTCAGACACAACAGGACTGATGTACATATAAAGCAACAGTGACTATGGTAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR TCA 90 bp | CATTTAGGTCTAAGTGCTTCAAAGTCTTTCACACTCTCTGCATTGTTCAATTGCGGAGTGCAGAACAGATaGCAAAACTTGCTCCATATA | + |
|
Preference number: 4 (lower is better) Translates to: HLGLSASKSFTLSALFNCGVQNR*QNLLHI Trigger: TATATGGAGCAAGTTTTGTCATCTGTTCTGCACTCC...GCAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCACTTAGACCTAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR CCA 90 bp | TGCTACCATAGTCACTGTTGCTTTATATGTACATCAGTCCTGTTGTGTCTGAAAAATGTGTCCCCAGTATaGATAGAGGAATTCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CYHSHCCFICTSVLLCLKNVSPV*IEEFRK Trigger: TTTCCTGAATTCCTCTATCCATACTGGGGACACATT...TTTCAGACACAACAGGACTGATGTACATATAAAGCAACAGTGACTATGGTAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| CDS-3UTR CCA 90 bp | AGCTATGTGTGTTCTTTGGTTGACTATGTTGTTCTTTTGGTTCAGACTCTGAAAAATGTGTCCCCAGTATaGATAGAGGAATTCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SYVCSLVDYVVLLVQTLKNVSPV*IEEFRK Trigger: TTTCCTGAATTCCTCTATCCATACTGGGGACACATT...TTTCAGAGTCTGAACCAAAAGAACAACATAGTCAACCAAAGAACACACATAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
||
| 3UTR CAA 72 bp | TGCTTCAAAGTCTTTCACACTCTCTGCATTGTTCAATaGCAGGTTTCTGTAAATTGCCATTTACTACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CFKVFHTLCIVQ*QVSVNCHLLQE Trigger: TTCTTGTAGTAAATGGCAATTTACAGAAACCTGCAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
||
| 3UTR CAA 72 bp | TGCTTCAAAGTCTTTCACACTCTCTGCATTGTTCAATaGCAGGTTTCTGTAAATTGCCATTTACATACACAA | + |
|
Preference number: 4 (lower is better) Translates to: CFKVFHTLCIVQ*QVSVNCHLHTQ Trigger: TTGTGTATGTAAATGGCAATTTACAGAAACCTGCAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213486.2 |
||
| CDS-3UTR CAA 90 bp | TACTTATCCACTTTACATCTTGCTCACTGCCCCTCTCCTCGTCACACCTCCCACTGCAGTGCTGGGGCATaGGTCACACCTAGAAGAATG | + |
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Preference number: 5 (lower is better) Translates to: YLSTLHLAHCPSPRHTSHCSAGA*VTPRRM Trigger: CATTCTTCTAGGTGTGACCAATGCCCCAGCACTGCA...GTGGGAGGTGTGACGAGGAGAGGGGCAGTGAGCAAGATGTAAAGTGGATAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| CDS-3UTR CAA 90 bp | GGTCAGACAAGGCCAGCCCAGATAGAAGAACACATCCCACAGGCAGGCAACAGCTTCTCCACAACTTTCTaGAATGCACTTTTCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: GQTRPAQIEEHIPQAGNSFSTTF*NALFTS Trigger: GGAGGTGAAAAGTGCATTCAAGAAAGTTGTGGAGAA...GCTGTTGCCTGCCTGTGGGATGTGTTCTTCTATCTGGGCTGGCCTTGTCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| CDS-3UTR CAA 90 bp | AAGAACACATCCCACAGGCAGGCAACAGCTTTTGGGATAGCTACCCCCTGCCCTATTGTAGGAAATGGCTaGGTTTCCTACAAGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: KNTSHRQATAFGIATPCPIVGNG*VSYKKS Trigger: GGACTTCTTGTAGGAAACCAAGCCATTTCCTACAAT...AGGGCAGGGGGTAGCTATCCCAAAAGCTGTTGCCTGCCTGTGGGATGTGTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| CDS-3UTR CAA 90 bp | AAGACTCCCAAGATGGCTAGCCCTTGTTTAAGCAGAGAAGTGAATGTAGTGAAGTGCAGTGCTGGGGCATaGGTCACACCTAGAAGAATG | + |
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Preference number: 5 (lower is better) Translates to: KTPKMASPCLSREVNVVKCSAGA*VTPRRM Trigger: CATTCTTCTAGGTGTGACCAATGCCCCAGCACTGCA...CTTCACTACATTCACTTCTCTGCTTAAACAAGGGCTAGCCATCTTGGGAGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049724.8 ENSMUST00000215134.2 |
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| CDS-3UTR CAA 90 bp | CAGTGTGTCCTGAAATCTCACAGGATACCTAGGGAAGCATGGAGCTGCATTACATTCTCCACAACTTTCTaGAATGCACTTTTCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: QCVLKSHRIPREAWSCITFSTTF*NALFTS Trigger: GGAGGTGAAAAGTGCATTCAAGAAAGTTGTGGAGAA...TGTAATGCAGCTCCATGCTTCCCTAGGTATCCTGTGAGATTTCAGGACACACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| CDS-3UTR CAA 90 bp | CCATTTAGGTCTAAGTGCTTCAAAGTCTTTCACACTCTCTGCATTGTTCAATTGTGCAGTGCTGGGGCATaGGTCACACCTAGAAGAATG | + |
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Preference number: 5 (lower is better) Translates to: PFRSKCFKVFHTLCIVQLCSAGA*VTPRRM Trigger: CATTCTTCTAGGTGTGACCAATGCCCCAGCACTGCA...CAATTGAACAATGCAGAGAGTGTGAAAGACTTTGAAGCACTTAGACCTAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| CDS-3UTR CAA 90 bp | GTTCAAGACCCACATAAAGACCAAGCTGCGCATCTACTACTTATGTGCAGGAAGATTGTAGGAAATGGCTaGGTTTCCTACAAGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: VQDPHKDQAAHLLLMCRKIVGNG*VSYKKS Trigger: GGACTTCTTGTAGGAAACCAAGCCATTTCCTACAAT...CTTCCTGCACATAAGTAGTAGATGCGCAGCTTGGTCTTTATGTGGGTCTTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| CDS-3UTR CAA 90 bp | TCTGTTGGTCTTCCTGTGAAACAACTGAGAATTTTAACAAGAGACAAGATGAAGTTCTCCACAACTTTCTaGAATGCACTTTTCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: SVGLPVKQLRILTRDKMKFSTTF*NALFTS Trigger: GGAGGTGAAAAGTGCATTCAAGAAAGTTGTGGAGAA...CTTCATCTTGTCTCTTGTTAAAATTCTCAGTTGTTTCACAGGAAGACCAACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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| CDS CCA 72 bp | GGCTTGGTTTCCTACAAGAAGTCCAGCAACAACTGTTaGGGTAACAGCAGAGGAGTAAAAGATGTCTACCAG | + |
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Preference number: 6 (lower is better) Translates to: GLVSYKKSSNNC*GNSRGVKDVYQ Trigger: CTGGTAGACATCTTTTACTCCTCTGCTGTTACCCCAACAGTTGTTGCTGGACTTCTTGTAGGAAACCAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049724.8 ENSMUST00000213486.2 ENSMUST00000215134.2 |
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