Pregenerated sensors for OLFR1442 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044441Ensembl transcript IDs: ENSMUST00000057924.3, ENSMUST00000207341.3, ENSMUST00000208494.3, ENSMUST00000208657.3
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTGAAGGAAATGTCCATGCAGGGGAGCTGCAAGCTCAAGTTTCCTaGAGTAGGGATGTGGGTGCAGCTGGGAAGACCATCAAGGGGATC | + |
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Preference number: 1 (lower is better) Translates to: SEGNVHAGELQAQVS*SRDVGAAGKTIKGI Trigger: GATCCCCTTGATGGTCTTCCCAGCTGCACCCACATCCCTACTTCAGGAAACTTGAGCTTGCAGCTCCCCTGCATGGACATTTCCTTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR CCA 90 bp | GAATGGAGGGACAGTGTAAATGGGAAGGAAAGTGACTGTCTTATATaGGAGTCATGGAAGACTTCCAAGATGGCTAGCCCCTGTTTAAGC | + |
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Preference number: 1 (lower is better) Translates to: EWRDSVNGKESDCLI*ESWKTSKMASPCLS Trigger: GCTTAAACAGGGGCTAGCCATCTTGGAAGTCTTCCATGACTCCCATATAAGACAGTCACTTTCCTTCCCATTTACACTGTCCCTCCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR GCA 90 bp | CCCATGTGTGTCACAAGCAGAAACTTCTTCTCATGGGCTTTTCCTTaGATCTTCTTTAGATATGCACTACTAGTGGCCTGTAGAAAAATA | + |
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Preference number: 1 (lower is better) Translates to: PMCVTSRNFFSWAFP*IFFRYALLVACRKI Trigger: TATTTTTCTACAGGCCACTAGTAGTGCATATCTAAAGAAGATGCAAGGAAAAGCCCATGAGAAGAAGTTTCTGCTTGTGACACACATGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR GCA 90 bp | GTAGAGCATGGATCCATACACCTTCAAAAGAGAATACTAGCAGAATaGCATTGTACTCTGTGTATGTTTCTGCATCCAAATGTCTATACC | + |
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Preference number: 1 (lower is better) Translates to: VEHGSIHLQKRILAE*HCTLCMFLHPNVYT Trigger: GGTATAGACATTTGGATGCAGAAACATACACAGAGTACAATGGCATTCTGCTAGTATTCTCTTTTGAAGGTGTATGGATCCATGCTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGTGCAGCTGGGAAGACCATCAAGGGGATCAGTATGAATGGGGTGAGGGGGTGAGTGACAAGAGATaGTGCAAATATGTTAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: CGCSWEDHQGDQYEWGEGVSDKR*CKYVKH Trigger: ATGCTTAACATATTTGCATCATCTCTTGTCACTCAC...CCCCTCACCCCATTCATACTGATCCCCTTGATGGTCTTCCCAGCTGCACCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGTGCAGCTGGGAAGACCATCAAGGGGATCAGTATGAATGGGGTGAGGGGAGAATACTAGCAGAATaGCATTGTACTCTGTGTATG | + |
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Preference number: 2 (lower is better) Translates to: CGCSWEDHQGDQYEWGEGRILAE*HCTLCM Trigger: CATACACAGAGTACAATGGCATTCTGCTAGTATTCT...CCCCTCACCCCATTCATACTGATCCCCTTGATGGTCTTCCCAGCTGCACCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR TCA 90 bp | GTGACTGTCTTATATGGGAGTCATGGAAGACTTCCAAGATGGCTAGCCCCTGTTGTGGATTTAGGGAGATaGTCCAGTGGGCAAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: VTVLYGSHGRLPRWLAPVVDLGR*SSGQNK Trigger: TTTGTTTTGCCCACTGGATCATCTCCCTAAATCCAC...AACAGGGGCTAGCCATCTTGGAAGTCTTCCATGACTCCCATATAAGACAGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGAAGACAAGGCAGAATGGAGGGACAGTGTAAATGGGAAGGAAAGTGACTGTGGGACAGACTGTGAGTaGCAAGAGATGATGCAAATA | + |
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Preference number: 2 (lower is better) Translates to: CEDKAEWRDSVNGKESDCGTDCE*QEMMQI Trigger: TATTTGCATCATCTCTTGTCACTCACAGTCTGTCCC...ACAGTCACTTTCCTTCCCATTTACACTGTCCCTCCATTCTGCCTTGTCTTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTATCTGCTAAGCCATCTATCCAGCCCCAATAGCTTTTTCTTATCTGCCAATGGGGATCAGTATGAATaGGGTGAGGGGACAGACTGT | + |
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Preference number: 2 (lower is better) Translates to: SYLLSHLSSPNSFFLSANGDQYE*GEGTDC Trigger: ACAGTCTGTCCCCTCACCCCATTCATACTGATCCCC...ATTGGCAGATAAGAAAAAGCTATTGGGGCTGGATAGATGGCTTAGCAGATAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000208494.3 |
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| 3UTR-3UTR TCA 90 bp | GTGACTGTCTTATATGGGAGTCATGGAAGACTTCCAAGATGGCTAGCCCCTGTTTATAATTCCAGAGGTTaGAACAAGGAATCAGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VTVLYGSHGRLPRWLAPVYNSRG*NKESEE Trigger: CTCTTCTGATTCCTTGTTTCAACCTCTGGAATTATA...AACAGGGGCTAGCCATCTTGGAAGTCTTCCATGACTCCCATATAAGACAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGAAGACAAGGCAGAATGGAGGGACAGTGTAAATGGGAAGGAAAGTGACTGTAGAAACTTCTTCTCATaGGCTTTTCCTTGCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: CEDKAEWRDSVNGKESDCRNFFS*AFPCIF Trigger: GAAGATGCAAGGAAAAGCCCATGAGAAGAAGTTTCT...ACAGTCACTTTCCTTCCCATTTACACTGTCCCTCCATTCTGCCTTGTCTTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGCACATGAATGTAGAGCATGGATCCATACACCTTCAAAAGAGAATACTCACTTGACATCAATGTaGCCTGACTCTAGGTCACTA | + |
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Preference number: 2 (lower is better) Translates to: VCAHECRAWIHTPSKENTHLTSM*PDSRSL Trigger: TAGTGACCTAGAGTCAGGTCACATTGATGTCAAGTG...AGTATTCTCTTTTGAAGGTGTATGGATCCATGCTCTACATTCATGTGCACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR TCA 90 bp | GTAGAGCATGGATCCATACACCTTCAAAAGAGAATACTAGCAGAATGCCATTGTCACTTGACATCAATGTaGCCTGACTCTAGGTCACTA | + |
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Preference number: 2 (lower is better) Translates to: VEHGSIHLQKRILAECHCHLTSM*PDSRSL Trigger: TAGTGACCTAGAGTCAGGTCACATTGATGTCAAGTG...ACAATGGCATTCTGCTAGTATTCTCTTTTGAAGGTGTATGGATCCATGCTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGAAGACAAGGCAGAATGGAGGGACAGTGTAAATGGGAAGGAAAGTGACTGTATGGAAAACATAAGTTaGCAGGACACTTTAAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: CEDKAEWRDSVNGKESDCMENIS*QDTLKA Trigger: TGCTTTTAAAGTGTCCTGGCAACTTATGTTTTCCAT...ACAGTCACTTTCCTTCCCATTTACACTGTCCCTCCATTCTGCCTTGTCTTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR CAA 90 bp | GCATGGATCCATACACCTTCAAAAGAGAATACTAGCAGAATGCCATaGTACTCTGTGTATGTTTCTGCATCCAAATGTCTATACCCATGT | + |
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Preference number: 2 (lower is better) Translates to: AWIHTPSKENTSRMP*YSVYVSASKCLYPC Trigger: ACATGGGTATAGACATTTGGATGCAGAAACATACACAGAGTACAATGGCATTCTGCTAGTATTCTCTTTTGAAGGTGTATGGATCCATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTGTATGTTTCTGCATCCAAATGTCTATACCCATGTGTGTCACAAGCAGAATTAATTCTTCCACTTaGCATCAATGTGACCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: LCVCFCIQMSIPMCVTSRINSST*HQCDLT Trigger: AGTCAGGTCACATTGATGTCAAGTGGAAGAATTAAT...TCTGCTTGTGACACACATGGGTATAGACATTTGGATGCAGAAACATACACAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR CCA 90 bp | GAATGCCATTGTACTCTGTGTATGTTTCTGCATCCAAATGTCTATACCCATGTGAGAAACTTCTTCTCATaGGCTTTTCCTTGCATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ECHCTLCMFLHPNVYTHVRNFFS*AFPCIF Trigger: GAAGATGCAAGGAAAAGCCCATGAGAAGAAGTTTCT...CACATGGGTATAGACATTTGGATGCAGAAACATACACAGAGTACAATGGCATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTATCTGCTAAGCCATCTATCCAGCCCCAATAGCTTTTTCTTATCTGCCAATAGGGAGATGATCCAGTaGGCAAAACAAATATCATAC | + |
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Preference number: 2 (lower is better) Translates to: SYLLSHLSSPNSFFLSANREMIQ*AKQISY Trigger: GTATGATATTTGTTTTGCCCACTGGATCATCTCCCT...ATTGGCAGATAAGAAAAAGCTATTGGGGCTGGATAGATGGCTTAGCAGATAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000208494.3 |
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| 3UTR-3UTR CCA 90 bp | GCATCTTCAATGGGTCAAAATTGTATTCAAGTTCAAAGCAGGCGCATGAAGTTAAGTGACTGTCTTATATaGGAGTCATGGAAGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: ASSMGQNCIQVQSRRMKLSDCLI*ESWKTS Trigger: GGAAGTCTTCCATGACTCCCATATAAGACAGTCACT...TAACTTCATGCGCCTGCTTTGAACTTGAATACAATTTTGACCCATTGAAGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGCACATGAATGTAGAGCATGGATCCATACACCTTCAAAAGAGAATACTATTAATTCTTCCACTTaGCATCAATGTGACCTGACT | + |
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Preference number: 2 (lower is better) Translates to: VCAHECRAWIHTPSKENTINSST*HQCDLT Trigger: AGTCAGGTCACATTGATGTCAAGTGGAAGAATTAAT...AGTATTCTCTTTTGAAGGTGTATGGATCCATGCTCTACATTCATGTGCACACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR TCA 90 bp | GTGCACATGAATGTAGAGCATGGATCCATACACCTTCAAAAGAGAATACTAGCAATTAATTCTTCCACTTaGCATCAATGTGACCTGACT | + |
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Preference number: 2 (lower is better) Translates to: VHMNVEHGSIHLQKRILAINSST*HQCDLT Trigger: AGTCAGGTCACATTGATGTCAAGTGGAAGAATTAAT...TGCTAGTATTCTCTTTTGAAGGTGTATGGATCCATGCTCTACATTCATGTGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR TCA 90 bp | ACACTGTCACTATCTTCAGACACACCAGAAAAGGGCATTAAATCCAATTGCAGATCTACCATTGCTGAGTaGAAATACAGGTTAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: TLSLSSDTPEKGIKSNCRSTIAE*KYRLKC Trigger: GCATTTTAACCTGTATTTTCACTCAGCAATGGTAGA...TCTGCAATTGGATTTAATGCCCTTTTCTGGTGTGTCTGAAGATAGTGACAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208494.3 |
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| 3UTR-3UTR TCA 90 bp | ACACTGTCACTATCTTCAGACACACCAGAAAAGGGCATTAAATCCAATTGCAGAGTACTCTACCATTGCTaGGTGAAAATACAGGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: TLSLSSDTPEKGIKSNCRVLYHC*VKIQVK Trigger: TTTAACCTGTATTTTCACTCAGCAATGGTAGAGTAC...TCTGCAATTGGATTTAATGCCCTTTTCTGGTGTGTCTGAAGATAGTGACAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208494.3 |
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| 3UTR-3UTR GCA 90 bp | CATGAATGTAGAGCATGGATCCATACACCTTCAAAAGAGAATACTAGCAGAATGCTCTGTGTATGTTTCTaGATCCAAATGTCTATACCC | + |
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Preference number: 2 (lower is better) Translates to: HECRAWIHTPSKENTSRMLCVCF*IQMSIP Trigger: GGGTATAGACATTTGGATGCAGAAACATACACAGAG...CATTCTGCTAGTATTCTCTTTTGAAGGTGTATGGATCCATGCTCTACATTCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR TCA 90 bp | GCATCTTCAATGGGTCAAAATTGTATTCAAGTTCAAAGCAGGCGCATGAAGTTAGTGAGTGACAAGAGATaGTGCAAATATGTTAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: ASSMGQNCIQVQSRRMKLVSDKR*CKYVKH Trigger: ATGCTTAACATATTTGCATCATCTCTTGTCACTCAC...TAACTTCATGCGCCTGCTTTGAACTTGAATACAATTTTGACCCATTGAAGATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR GCA 90 bp | GCATCTTCAATGGGTCAAAATTGTATTCAAGTTCAAAGCAGGCGCATGAAGTTATCATGGGCTTTTCCTTaGATCTTCTTTAGATATGCA | + |
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Preference number: 2 (lower is better) Translates to: ASSMGQNCIQVQSRRMKLSWAFP*IFFRYA Trigger: TGCATATCTAAAGAAGATGCAAGGAAAAGCCCATGA...TAACTTCATGCGCCTGCTTTGAACTTGAATACAATTTTGACCCATTGAAGATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR TCA 72 bp | AATGTCCATGCAGGGGAGCTGCAAGCTCAAGTTTCCTaGAGTAGGGATGTGGGTGCAGCTGGGAAGACCATC | + |
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Preference number: 3 (lower is better) Translates to: NVHAGELQAQVS*SRDVGAAGKTI Trigger: GATGGTCTTCCCAGCTGCACCCACATCCCTACTTCAGGAAACTTGAGCTTGCAGCTCCCCTGCATGGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR CCA 72 bp | GGGAGCTGCAAGCTCAAGTTTCCTGAAGTAGGGATGTaGGTGCAGCTGGGAAGACCATCAAGGGGATCAGTA | + |
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Preference number: 3 (lower is better) Translates to: GSCKLKFPEVGM*VQLGRPSRGSV Trigger: TACTGATCCCCTTGATGGTCTTCCCAGCTGCACCCACATCCCTACTTCAGGAAACTTGAGCTTGCAGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGTGCAGCTGGGAAGACCATCAAGGGGATCAGTATGAATGGGGTGAGGGGCATGGAAAACATAAGTaGCCAGGACACTTTAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: CGCSWEDHQGDQYEWGEGHGKHK*PGHFKS Trigger: GCTTTTAAAGTGTCCTGGCAACTTATGTTTTCCATG...CCCCTCACCCCATTCATACTGATCCCCTTGATGGTCTTCCCAGCTGCACCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR TCA 72 bp | GGCAGAATGGAGGGACAGTGTAAATGGGAAGGAAAGTaGCTGTCTTATATGGGAGTCATGGAAGACTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: GRMEGQCKWEGK*LSYMGVMEDFQ Trigger: TTGGAAGTCTTCCATGACTCCCATATAAGACAGTCACTTTCCTTCCCATTTACACTGTCCCTCCATTCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR CCA 72 bp | AATGGGAAGGAAAGTGACTGTCTTATATGGGAGTCATaGAAGACTTCCAAGATGGCTAGCCCCTGTTTAAGC | + |
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Preference number: 3 (lower is better) Translates to: NGKESDCLIWES*KTSKMASPCLS Trigger: GCTTAAACAGGGGCTAGCCATCTTGGAAGTCTTCCATGACTCCCATATAAGACAGTCACTTTCCTTCCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR TCA 72 bp | GGAAGGGTGTGGGCACCCACCTATAATTCCAGAGGTTaGAACAAGGAATCAGAAGAGGAAAATGACTATCTA | + |
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Preference number: 3 (lower is better) Translates to: GRVWAPTYNSRG*NKESEEENDYL Trigger: TAGATAGTCATTTTCCTCTTCTGATTCCTTGTTTCAACCTCTGGAATTATAGGTGGGTGCCCACACCCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR-3UTR CAA 90 bp | TGTGAAGACAAGGCAGAATGGAGGGACAGTGTAAATGGGAAGGAAAGTGACTGTCATGGAAAACATAAGTaGCCAGGACACTTTAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: CEDKAEWRDSVNGKESDCHGKHK*PGHFKS Trigger: GCTTTTAAAGTGTCCTGGCAACTTATGTTTTCCATG...ACAGTCACTTTCCTTCCCATTTACACTGTCCCTCCATTCTGCCTTGTCTTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR TCA 72 bp | GATGATGCAAATATGTTAAGCATAAGTGAGCACCACTaGGTCCCCAGAAGCACTTGCAGAGATAATACATGG | + |
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Preference number: 3 (lower is better) Translates to: DDANMLSISEHH*VPRSTCRDNTW Trigger: CCATGTATTATCTCTGCAAGTGCTTCTGGGGACTCAGTGGTGCTCACTTATGCTTAACATATTTGCATCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR GCA 72 bp | GGATCCATACACCTTCAAAAGAGAATACTAGCAGAATaGCATTGTACTCTGTGTATGTTTCTGCATCCAAAT | + |
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Preference number: 3 (lower is better) Translates to: GSIHLQKRILAE*HCTLCMFLHPN Trigger: ATTTGGATGCAGAAACATACACAGAGTACAATGGCATTCTGCTAGTATTCTCTTTTGAAGGTGTATGGATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CCA 90 bp | TGTGGGTGCAGCTGGGAAGACCATCAAGGGGATCAGTATGAATGGGGTGAGGGGGTAGACATAGCCTTCTaGTATCCTGCAGCTGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: CGCSWEDHQGDQYEWGEGVDIAF*YPAAER Trigger: GCGCTCAGCTGCAGGATACCAGAAGGCTATGTCTAC...CCCCTCACCCCATTCATACTGATCCCCTTGATGGTCTTCCCAGCTGCACCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR TCA 90 bp | TGTGGGTGCAGCTGGGAAGACCATCAAGGGGATCAGTATGAATGGGGTGAGGGGTGTTGGAGCTACAGCTaGGGAGTAAAAGATGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: CGCSWEDHQGDQYEWGEGCWSYS*GVKDVH Trigger: GTGGACATCTTTTACTCCTCAGCTGTAGCTCCAACA...CCCCTCACCCCATTCATACTGATCCCCTTGATGGTCTTCCCAGCTGCACCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CCA 90 bp | TGTGGGTGCAGCTGGGAAGACCATCAAGGGGATCAGTATGAATGGGGTGAGGGGTTTTATCAGTGTCCATaGAGTGGCTGGAGGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: CGCSWEDHQGDQYEWGEGFYQCP*SGWRWV Trigger: AACCCACCTCCAGCCACTCCATGGACACTGATAAAA...CCCCTCACCCCATTCATACTGATCCCCTTGATGGTCTTCCCAGCTGCACCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CCA 90 bp | GTGACTGTCTTATATGGGAGTCATGGAAGACTTCCAAGATGGCTAGCCCCTGTTTTTTATCAGTGTCCATaGAGTGGCTGGAGGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: VTVLYGSHGRLPRWLAPVFYQCP*SGWRWV Trigger: AACCCACCTCCAGCCACTCCATGGACACTGATAAAA...AACAGGGGCTAGCCATCTTGGAAGTCTTCCATGACTCCCATATAAGACAGTCAC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CCA 90 bp | CATTGTACTCTGTGTATGTTTCTGCATCCAAATGTCTATACCCATGTGTGTCACGTAGACATAGCCTTCTaGTATCCTGCAGCTGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: HCTLCMFLHPNVYTHVCHVDIAF*YPAAER Trigger: GCGCTCAGCTGCAGGATACCAGAAGGCTATGTCTAC...GTGACACACATGGGTATAGACATTTGGATGCAGAAACATACACAGAGTACAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR TCA 90 bp | CTCTGTGTATGTTTCTGCATCCAAATGTCTATACCCATGTGTGTCACAAGCAGATGTTGGAGCTACAGCTaGGGAGTAAAAGATGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LCVCFCIQMSIPMCVTSRCWSYS*GVKDVH Trigger: GTGGACATCTTTTACTCCTCAGCTGTAGCTCCAACA...TCTGCTTGTGACACACATGGGTATAGACATTTGGATGCAGAAACATACACAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CCA 90 bp | GTCACTAGGTACCTAAGAAAATGTGATAGGTATGGAGTTGCGTTACAATACCATGTAGACATAGCCTTCTaGTATCCTGCAGCTGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: VTRYLRKCDRYGVALQYHVDIAF*YPAAER Trigger: GCGCTCAGCTGCAGGATACCAGAAGGCTATGTCTAC...ATGGTATTGTAACGCAACTCCATACCTATCACATTTTCTTAGGTACCTAGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CCA 90 bp | CATGGATCCATACACCTTCAAAAGAGAATACTAGCAGAATGCCATTGTACTCTGTTTTATCAGTGTCCATaGAGTGGCTGGAGGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: HGSIHLQKRILAECHCTLFYQCP*SGWRWV Trigger: AACCCACCTCCAGCCACTCCATGGACACTGATAAAA...CAGAGTACAATGGCATTCTGCTAGTATTCTCTTTTGAAGGTGTATGGATCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR TCA 90 bp | CATGAATGTAGAGCATGGATCCATACACCTTCAAAAGAGAATACTAGCAGAATGTGTTGGAGCTACAGCTaGGGAGTAAAAGATGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: HECRAWIHTPSKENTSRMCWSYS*GVKDVH Trigger: GTGGACATCTTTTACTCCTCAGCTGTAGCTCCAACA...CATTCTGCTAGTATTCTCTTTTGAAGGTGTATGGATCCATGCTCTACATTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR TCA 90 bp | GTCACTAGGTACCTAAGAAAATGTGATAGGTATGGAGTTGCGTTACAATACCATACACAGTTGGAGTCATaGTGGTGGTATAATGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VTRYLRKCDRYGVALQYHTQLES*WWYNAG Trigger: CCCTGCATTATACCACCATCATGACTCCAACTGTGT...ATGGTATTGTAACGCAACTCCATACCTATCACATTTTCTTAGGTACCTAGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR TCA 90 bp | GTGTGTGCACATGAATGTAGAGCATGGATCCATACACCTTCAAAAGAGAATACTATTGGATCCACAAAATaGAAGCCTGAATGTGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: VCAHECRAWIHTPSKENTIGSTK*KPECVP Trigger: GGGGACACATTCAGGCTTTCATTTTGTGGATCCAAT...AGTATTCTCTTTTGAAGGTGTATGGATCCATGCTCTACATTCATGTGCACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CCA 90 bp | GTCACTAGGTACCTAAGAAAATGTGATAGGTATGGAGTTGCGTTACAATACCATTTTTATCAGTGTCCATaGAGTGGCTGGAGGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: VTRYLRKCDRYGVALQYHFYQCP*SGWRWV Trigger: AACCCACCTCCAGCCACTCCATGGACACTGATAAAA...ATGGTATTGTAACGCAACTCCATACCTATCACATTTTCTTAGGTACCTAGTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR TCA 90 bp | AGGTACCTAAGAAAATGTGATAGGTATGGAGTTGCGTTACAATACCATACAATGTGTTGGAGCTACAGCTaGGGAGTAAAAGATGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RYLRKCDRYGVALQYHTMCWSYS*GVKDVH Trigger: GTGGACATCTTTTACTCCTCAGCTGTAGCTCCAACA...CATTGTATGGTATTGTAACGCAACTCCATACCTATCACATTTTCTTAGGTACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR TCA 90 bp | GTCACTAGGTACCTAAGAAAATGTGATAGGTATGGAGTTGCGTTACAATACCATATTGGATCCACAAAATaGAAGCCTGAATGTGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: VTRYLRKCDRYGVALQYHIGSTK*KPECVP Trigger: GGGGACACATTCAGGCTTTCATTTTGTGGATCCAAT...ATGGTATTGTAACGCAACTCCATACCTATCACATTTTCTTAGGTACCTAGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR TCA 90 bp | CATGAATGTAGAGCATGGATCCATACACCTTCAAAAGAGAATACTAGCAGAATGATTGGATCCACAAAATaGAAGCCTGAATGTGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: HECRAWIHTPSKENTSRMIGSTK*KPECVP Trigger: GGGGACACATTCAGGCTTTCATTTTGTGGATCCAAT...CATTCTGCTAGTATTCTCTTTTGAAGGTGTATGGATCCATGCTCTACATTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR TCA 90 bp | ATGAATGTAGAGCATGGATCCATACACCTTCAAAAGAGAATACTAGCAGAATGCATTGGATCCACAAAATaGAAGCCTGAATGTGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: MNVEHGSIHLQKRILAECIGSTK*KPECVP Trigger: GGGGACACATTCAGGCTTTCATTTTGTGGATCCAAT...GCATTCTGCTAGTATTCTCTTTTGAAGGTGTATGGATCCATGCTCTACATTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CCA 90 bp | GTCACTAGGTACCTAAGAAAATGTGATAGGTATGGAGTTGCGTTACAATACCATAATGTGTCCCCAGTGTaGATGGAGGAATTCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: VTRYLRKCDRYGVALQYHNVSPV*MEEFRK Trigger: TTTCCTGAATTCCTCCATCCACACTGGGGACACATT...ATGGTATTGTAACGCAACTCCATACCTATCACATTTTCTTAGGTACCTAGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR GCA 90 bp | CTCTGTGTATGTTTCTGCATCCAAATGTCTATACCCATGTGTGTCACAAGCAGAACAGATAATGAAGCCTaGTCCATAAATGAGTACTAT | + |
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Preference number: 4 (lower is better) Translates to: LCVCFCIQMSIPMCVTSRTDNEA*SINEYY Trigger: ATAGTACTCATTTATGGAGCAGGCTTCATTATCTGT...TCTGCTTGTGACACACATGGGTATAGACATTTGGATGCAGAAACATACACAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR GCA 90 bp | GAATGCCATTGTACTCTGTGTATGTTTCTGCATCCAAATGTCTATACCCATGTGACAGATAATGAAGCCTaGTCCATAAATGAGTACTAT | + |
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Preference number: 4 (lower is better) Translates to: ECHCTLCMFLHPNVYTHVTDNEA*SINEYY Trigger: ATAGTACTCATTTATGGAGCAGGCTTCATTATCTGT...CACATGGGTATAGACATTTGGATGCAGAAACATACACAGAGTACAATGGCATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR GCA 90 bp | CATTGTACTCTGTGTATGTTTCTGCATCCAAATGTCTATACCCATGTGTGTCACACAGATAATGAAGCCTaGTCCATAAATGAGTACTAT | + |
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Preference number: 4 (lower is better) Translates to: HCTLCMFLHPNVYTHVCHTDNEA*SINEYY Trigger: ATAGTACTCATTTATGGAGCAGGCTTCATTATCTGT...GTGACACACATGGGTATAGACATTTGGATGCAGAAACATACACAGAGTACAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR GCA 90 bp | GTCACTAGGTACCTAAGAAAATGTGATAGGTATGGAGTTGCGTTACAATACCATCAAAATAACAAGGAGTaGAGAACAGATAATGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: VTRYLRKCDRYGVALQYHQNNKE*RTDNEA Trigger: GGCTTCATTATCTGTTCTGCACTCCTTGTTATTTTG...ATGGTATTGTAACGCAACTCCATACCTATCACATTTTCTTAGGTACCTAGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CCA 90 bp | GTCACTAGGTACCTAAGAAAATGTGATAGGTATGGAGTTGCGTTACAATACCATACATATACACACAGTTaGAGTCATGATGGTGGTATA | + |
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Preference number: 4 (lower is better) Translates to: VTRYLRKCDRYGVALQYHTYTHS*SHDGGI Trigger: TATACCACCATCATGACTCCAACTGTGTGTATATGT...ATGGTATTGTAACGCAACTCCATACCTATCACATTTTCTTAGGTACCTAGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CCA 90 bp | ATGAATGTAGAGCATGGATCCATACACCTTCAAAAGAGAATACTAGCAGAATGCACATATACACACAGTTaGAGTCATGATGGTGGTATA | + |
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Preference number: 4 (lower is better) Translates to: MNVEHGSIHLQKRILAECTYTHS*SHDGGI Trigger: TATACCACCATCATGACTCCAACTGTGTGTATATGT...GCATTCTGCTAGTATTCTCTTTTGAAGGTGTATGGATCCATGCTCTACATTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| 3UTR CAA 72 bp | CATACACCTTCAAAAGAGAATACTAGCAGAATGCCATaGTACTCTGTGTATGTTTCTGCATCCAAATGTCTA | + |
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Preference number: 4 (lower is better) Translates to: HTPSKENTSRMP*YSVYVSASKCL Trigger: TAGACATTTGGATGCAGAAACATACACAGAGTACAATGGCATTCTGCTAGTATTCTCTTTTGAAGGTGTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CCA 90 bp | AGGTACCTAAGAAAATGTGATAGGTATGGAGTTGCGTTACAATACCATACAATGACATATACACACAGTTaGAGTCATGATGGTGGTATA | + |
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Preference number: 4 (lower is better) Translates to: RYLRKCDRYGVALQYHTMTYTHS*SHDGGI Trigger: TATACCACCATCATGACTCCAACTGTGTGTATATGT...CATTGTATGGTATTGTAACGCAACTCCATACCTATCACATTTTCTTAGGTACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR GCA 90 bp | ACTAGGTACCTAAGAAAATGTGATAGGTATGGAGTTGCGTTACAATACCATACAACAGATAATGAAGCCTaGTCCATAAATGAGTACTAT | + |
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Preference number: 4 (lower is better) Translates to: TRYLRKCDRYGVALQYHTTDNEA*SINEYY Trigger: ATAGTACTCATTTATGGAGCAGGCTTCATTATCTGT...TGTATGGTATTGTAACGCAACTCCATACCTATCACATTTTCTTAGGTACCTAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CCA 90 bp | TCACATGTAAAGTGGACACGTCCTTTGTTTTTACTCTATTTTCATGGTAGCATAACATATACACACAGTTaGAGTCATGATGGTGGTATA | + |
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Preference number: 4 (lower is better) Translates to: SHVKWTRPLFLLYFHGSITYTHS*SHDGGI Trigger: TATACCACCATCATGACTCCAACTGTGTGTATATGT...TATGCTACCATGAAAATAGAGTAAAAACAAAGGACGTGTCCACTTTACATGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CAA 90 bp | CATGGATCCATACACCTTCAAAAGAGAATACTAGCAGAATGCCATTGTACTCTGATCCTAAGGAATACTTaGCTTTCTCCACAACTTTCT | + |
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Preference number: 5 (lower is better) Translates to: HGSIHLQKRILAECHCTLILRNT*LSPQLS Trigger: AGAAAGTTGTGGAGAAAGCAAAGTATTCCTTAGGAT...CAGAGTACAATGGCATTCTGCTAGTATTCTCTTTTGAAGGTGTATGGATCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CAA 90 bp | GTCACTAGGTACCTAAGAAAATGTGATAGGTATGGAGTTGCGTTACAATACCATATCCTAAGGAATACTTaGCTTTCTCCACAACTTTCT | + |
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Preference number: 5 (lower is better) Translates to: VTRYLRKCDRYGVALQYHILRNT*LSPQLS Trigger: AGAAAGTTGTGGAGAAAGCAAAGTATTCCTTAGGAT...ATGGTATTGTAACGCAACTCCATACCTATCACATTTTCTTAGGTACCTAGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CAA 90 bp | CATGAATGTAGAGCATGGATCCATACACCTTCAAAAGAGAATACTAGCAGAATGATCCTAAGGAATACTTaGCTTTCTCCACAACTTTCT | + |
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Preference number: 5 (lower is better) Translates to: HECRAWIHTPSKENTSRMILRNT*LSPQLS Trigger: AGAAAGTTGTGGAGAAAGCAAAGTATTCCTTAGGAT...CATTCTGCTAGTATTCTCTTTTGAAGGTGTATGGATCCATGCTCTACATTCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS-3UTR CAA 90 bp | TCACATGTAAAGTGGACACGTCCTTTGTTTTTACTCTATTTTCATGGTAGCATAATCCTAAGGAATACTTaGCTTTCTCCACAACTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SHVKWTRPLFLLYFHGSIILRNT*LSPQLS Trigger: AGAAAGTTGTGGAGAAAGCAAAGTATTCCTTAGGAT...TATGCTACCATGAAAATAGAGTAAAAACAAAGGACGTGTCCACTTTACATGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS CAA 72 bp | AGACAACTATGTTTCCTACAAGAAGTCCAGCCAAAATaGTTGGAGCTACAGCTGAGGAGTAAAAGATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RQLCFLQEVQPK*LELQLRSKRCP Trigger: TGGACATCTTTTACTCCTCAGCTGTAGCTCCAACAATTTTGGCTGGACTTCTTGTAGGAAACATAGTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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| CDS GCA 72 bp | CAAAATAACAAGGAGTGCAGAACAGATAATGAAGCCTaGTCCATAAATGAGTACTATCTCACTAACATGTCT | + |
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Preference number: 6 (lower is better) Translates to: QNNKECRTDNEA*SINEYYLTNMS Trigger: AGACATGTTAGTGAGATAGTACTCATTTATGGAGCAGGCTTCATTATCTGTTCTGCACTCCTTGTTATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057924.3 ENSMUST00000207341.3 ENSMUST00000208494.3 ENSMUST00000208657.3 |
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