Pregenerated sensors for OLFR1437 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096436Ensembl transcript IDs: ENSMUST00000052558.4, ENSMUST00000207241.3
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTCTCTACTGATAGAGAAATATCTGCAACAATACATGTCTCAGTaGCAAAGTGCGAAAGCACAAAGGGCAAAGAGTGGCCTATCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: SSLLIEKYLQQYMSQ*QSAKAQRAKSGLSL Trigger: CAGAGATAGGCCACTCTTTGCCCTTTGTGCTTTCGCACTTTGCCACTGAGACATGTATTGTTGCAGATATTTCTCTATCAGTAGAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR TCA 90 bp | CTGGGTAGGAGAAACTATGGTTACCATCTAAGAGCACTTAACTGGTaGCACTTGGGAAACTGGCAGAGTTTTCATTGCAGCTTTGACTAT | + |
|
Preference number: 1 (lower is better) Translates to: LGRRNYGYHLRALNW*HLGNWQSFHCSFDY Trigger: ATAGTCAAAGCTGCAATGAAAACTCTGCCAGTTTCCCAAGTGTCACCAGTTAAGTGCTCTTAGATGGTAACCATAGTTTCTCCTACCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR GCA 90 bp | ACTGATAGAGAAATATCTGCAACAATACATGTCTCAGTGGCAAAGTaGGAAAGCACAAAGGGCAAAGAGTGGCCTATCTCTGAAGATTTC | + |
|
Preference number: 1 (lower is better) Translates to: TDREISATIHVSVAK*ESTKGKEWPISEDF Trigger: GAAATCTTCAGAGATAGGCCACTCTTTGCCCTTTGTGCTTTCGCACTTTGCCACTGAGACATGTATTGTTGCAGATATTTCTCTATCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR TCA 90 bp | AACCCAGACATGCATACAGCCTTCTGTAAGGACAAGACCAAGGGCTaGAAGTCTTTAATTGCAGCAGCAAAATCTTATAAATTTAGTTGT | + |
|
Preference number: 1 (lower is better) Translates to: NPDMHTAFCKDKTKG*KSLIAAAKSYKFSC Trigger: ACAACTAAATTTATAAGATTTTGCTGCTGCAATTAAAGACTTTCAGCCCTTGGTCTTGTCCTTACAGAAGGCTGTATGCATGTCTGGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR TCA 90 bp | GAAACAAAGAACATTGGTCTTCATCAGGTCTTTATTCTGCTGAATTaGGCCATTTTTGAGGCAAGAGTTCTAAACCCAGACATGCATACA | + |
|
Preference number: 1 (lower is better) Translates to: ETKNIGLHQVFILLN*AIFEARVLNPDMHT Trigger: TGTATGCATGTCTGGGTTTAGAACTCTTGCCTCAAAAATGGCTCAATTCAGCAGAATAAAGACCTGATGAAGACCAATGTTCTTTGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR TCA 90 bp | TTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATCGAAATTaGTCCTCTCTACTGATAGAGAAATATCTGCAACAATACATGTCT | + |
|
Preference number: 1 (lower is better) Translates to: FTIPSSTEVNQGHRN*SSLLIEKYLQQYMS Trigger: AGACATGTATTGTTGCAGATATTTCTCTATCAGTAGAGAGGATCAATTTCGATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCAGCCCGGGCGTGGGATGTTCCTTTTTCTCTTAGGTTTTTCTTCAGGCAGGGATCTGCAGAGATCTaGTTCAAAGGGGGTGTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RPARAWDVPFSLRFFFRQGSAEI*FKGGVL Trigger: GAGCACACCCCCTTTGAAGCAGATCTCTGCAGATCC...CTGCCTGAAGAAAAACCTAAGAGAAAAAGGAACATCCCACGCCCGGGCTGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCAGCCCGGGCGTGGGATGTTCCTTTTTCTCTTAGGTTTTTCTTCAGGCAGGCTCCTCTCAAACACTaGTGTTCAGGATCTTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RPARAWDVPFSLRFFFRQAPLKH*CSGSLR Trigger: CCTCAAAGATCCTGAACAGCAGTGTTTGAGAGGAGC...CTGCCTGAAGAAAAACCTAAGAGAAAAAGGAACATCCCACGCCCGGGCTGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCAGCCCGGGCGTGGGATGTTCCTTTTTCTCTTAGGTTTTTCTTCAGGCAGAGGTCTTTATTCTGCTaGATTGAGCCATTTTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RPARAWDVPFSLRFFFRQRSLFC*IEPFLR Trigger: CCTCAAAAATGGCTCAATTCAGCAGAATAAAGACCT...CTGCCTGAAGAAAAACCTAAGAGAAAAAGGAACATCCCACGCCCGGGCTGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCAGCCCGGGCGTGGGATGTTCCTTTTTCTCTTAGGTTTTTCTTCAGGCAGTTTTCATTGCAGCTTTaGCTATCAGAAAAGGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: RPARAWDVPFSLRFFFRQFSLQL*LSEKDL Trigger: TAGGTCCTTTTCTGATAGTCAAAGCTGCAATGAAAA...CTGCCTGAAGAAAAACCTAAGAGAAAAAGGAACATCCCACGCCCGGGCTGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCCTCTATTGATCTTAGCTATCTTCATGATTCTCACGCTTCTCTTTGTCCTAGTCCCTCACAGCCTTaGTTAATGAGGGCTCACCTG | + |
|
Preference number: 2 (lower is better) Translates to: FSSIDLSYLHDSHASLCPSPSQP*LMRAHL Trigger: CAGGTGAGCCCTCATTAAGCAAGGCTGTGAGGGACT...AGGACAAAGAGAAGCGTGAGAATCATGAAGATAGCTAAGATCAATAGAGGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGAGGCACAGCCAAGTCAATGTTAATTTTATTCCTTCTAACAGGAGGTGTCGAATTGAGCCATTTTTaGGGCAAGAGTTCTAAACCC | + |
|
Preference number: 2 (lower is better) Translates to: PGGTAKSMLILFLLTGGVELSHF*GKSSKP Trigger: GGGTTTAGAACTCTTGCCTCAAAAATGGCTCAATTC...GACACCTCCTGTTAGAAGGAATAAAATTAACATTGACTTGGCTGTGCCTCCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR TCA 90 bp | CAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATCAGAGCACTTAACTGGTaGCACTTGGGAAACTGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QALFCLLFHHPQRSTKVIRALNW*HLGNWQ Trigger: CTGCCAGTTTCCCAAGTGTCACCAGTTAAGTGCTCT...GATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR TCA 90 bp | GGTTTACTTATTTTAAGCCTAAGTTACTATACTGTTGTAGCTGACCTGCCTTCTGACAAGACCAAGGGCTaGAAGTCTTTAATTGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GLLILSLSYYTVVADLPSDKTKG*KSLIAA Trigger: TGCTGCAATTAAAGACTTTCAGCCCTTGGTCTTGTC...AGAAGGCAGGTCAGCTACAACAGTATAGTAACTTAGGCTTAAAATAAGTAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATCTTAACTGGTGACACTTaGGAAACTGGCAGAGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: QALFCLLFHHPQRSTKVILTGDT*ETGRVF Trigger: GAAAACTCTGCCAGTTTCCCAAGTGTCACCAGTTAA...GATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR CAA 90 bp | GTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATCGAAATaGATCCTCTCTACTGATAGAGAAATATCTGCAACAATACATGTC | + |
|
Preference number: 2 (lower is better) Translates to: VYYSIIHRGQPRSSK*ILSTDREISATIHV Trigger: GACATGTATTGTTGCAGATATTTCTCTATCAGTAGAGAGGATCAATTTCGATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATGCTCCACAGGTTCAATaGAGGTTTAAAACCATAACT | + |
|
Preference number: 2 (lower is better) Translates to: PSFILFTIPSSTEVNQGHAPQVQ*RFKTIT Trigger: AGTTATGGTTTTAAACCTTCATTGAACCTGTGGAGC...ATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR GCA 90 bp | CAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATCGTTTTGTATCACCTCTaGTCCTTTTTCATTGGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: QALFCLLFHHPQRSTKVIVLYHL*SFFIGQ Trigger: TTGCCCAATGAAAAAGGAGCAGAGGTGATACAAAAC...GATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCCTCTATTGATCTTAGCTATCTTCATGATTCTCACGCTTCTCTTTGTCCTTGTTTTAAAACCTCTTaGAATGTGCTCTGGGTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FSSIDLSYLHDSHASLCPCFKTS*NVLWVG Trigger: TCCTACCCAGAGCACATTCCAAGAGGTTTTAAAACA...AGGACAAAGAGAAGCGTGAGAATCATGAAGATAGCTAAGATCAATAGAGGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATTTTATTCTGCTGAATTaGGCCATTTTTGAGGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: PSFILFTIPSSTEVNQGHFILLN*AIFEAR Trigger: TCTTGCCTCAAAAATGGCTCAATTCAGCAGAATAAA...ATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR TCA 90 bp | CAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATCAGAGAGTTAGAGAAGTaGCCACAGAGTTTATTATCA | + |
|
Preference number: 2 (lower is better) Translates to: QALFCLLFHHPQRSTKVIRELEK*PQSLLS Trigger: TGATAATAAACTCTGTGGTCACTTCTCTAACTCTCT...GATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTACTTATTTTAAGCCTAAGTTACTATACTGTTGTAGCTGACCTGCCTTCTACATATTTGTGGATCTaGAGAGATCTGCTTCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLLILSLSYYTVVADLPSTYLWI*RDLLQR Trigger: CCTTTGAAGCAGATCTCTGCAGATCCACAAATATGT...AGAAGGCAGGTCAGCTACAACAGTATAGTAACTTAGGCTTAAAATAAGTAAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCCTCTATTGATCTTAGCTATCTTCATGATTCTCACGCTTCTCTTTGTCCTTGGCAGAGTTTTCATTaGAGCTTTGACTATCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FSSIDLSYLHDSHASLCPWQSFH*SFDYQK Trigger: TTTCTGATAGTCAAAGCTGCAATGAAAACTCTGCCA...AGGACAAAGAGAAGCGTGAGAATCATGAAGATAGCTAAGATCAATAGAGGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR CAA 90 bp | ACAGCCAAGTCAATGTTAATTTTATTCCTTCTAACAGGAGGTGTCTaGCTCAGAAACAAAGAACATTGGTCTTCATCAGGTCTTTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: TAKSMLILFLLTGGV*LRNKEHWSSSGLYS Trigger: AGAATAAAGACCTGATGAAGACCAATGTTCTTTGTTTCTGAGCAAGACACCTCCTGTTAGAAGGAATAAAATTAACATTGACTTGGCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR GCA 90 bp | CAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATCGAAAGAAAGTTAGAGTaGTACAGTATCAGATCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: QALFCLLFHHPQRSTKVIERKLE*YSIRSV Trigger: AACTGATCTGATACTGTAGCACTCTAACTTTCTTTC...GATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTACTTATTTTAAGCCTAAGTTACTATACTGTTGTAGCTGACCTGCCTTCTGATAGTACATATTTGTaGATCTGCAGAGATCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: GLLILSLSYYTVVADLPSDSTYL*ICRDLL Trigger: AAGCAGATCTCTGCAGATCCACAAATATGTACTATC...AGAAGGCAGGTCAGCTACAACAGTATAGTAACTTAGGCTTAAAATAAGTAAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTACTTATTTTAAGCCTAAGTTACTATACTGTTGTAGCTGACCTGCCTTCTCCCAAAAATCATAGATaGTTAGCATTCATTTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: GLLILSLSYYTVVADLPSPKNHR*LAFICL Trigger: AAGGCAAATGAATGCTAACCATCTATGATTTTTGGG...AGAAGGCAGGTCAGCTACAACAGTATAGTAACTTAGGCTTAAAATAAGTAAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR TCA 72 bp | GTGCGAAAGCACAAAGGGCAAAGAGTGGCCTATCTCTaGAGATTTCTTCCCACAAGTTTTGTATCACCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VRKHKGQRVAYL*RFLPTSFVSPL Trigger: CAGAGGTGATACAAAACTTGTGGGAAGAAATCTTCAGAGATAGGCCACTCTTTGCCCTTTGTGCTTTCGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR GCA 72 bp | ATGGCATCACTACAAGATAGTACATATTTGTGGATCTaGAGAGATCTGCTTCAAAGGGGGTGTGCTCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: MASLQDSTYLWI*RDLLQRGCAPT Trigger: AGTAGGAGCACACCCCCTTTGAAGCAGATCTCTGCAGATCCACAAATATGTACTATCTTGTAGTGATGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR CCA 72 bp | CTGATAGAGAAATATCTGCAACAATACATGTCTCAGTaGCAAAGTGCGAAAGCACAAAGGGCAAAGAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LIEKYLQQYMSQ*QSAKAQRAKSG Trigger: GCCACTCTTTGCCCTTTGTGCTTTCGCACTTTGCCACTGAGACATGTATTGTTGCAGATATTTCTCTATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR TCA 72 bp | GCAAAGCTCCTCTCAAACACTGCTGTTCAGGATCTTTaGGGGATACTTAGTAGGCTCTTGATTCTACCTATA | + |
|
Preference number: 3 (lower is better) Translates to: AKLLSNTAVQDL*GILSRLLILPI Trigger: TATAGGTAGAATCAAGAGCCTACTAAGTATCCCTCAAAGATCCTGAACAGCAGTGTTTGAGAGGAGCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR TCA 72 bp | TCATCAGGTCTTTATTCTGCTGAATTGAGCCATTTTTaGGGCAAGAGTTCTAAACCCAGACATGCATACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSGLYSAELSHF*GKSSKPRHAYS Trigger: GCTGTATGCATGTCTGGGTTTAGAACTCTTGCCTCAAAAATGGCTCAATTCAGCAGAATAAAGACCTGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATCCTAACAGGAGGTGTCTaGCTCAGAAACAAAGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: QALFCLLFHHPQRSTKVILTGGV*LRNKEH Trigger: ATGTTCTTTGTTTCTGAGCAAGACACCTCCTGTTAG...GATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR TCA 72 bp | AACATTGGTCTTCATCAGGTCTTTATTCTGCTGAATTaGGCCATTTTTGAGGCAAGAGTTCTAAACCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: NIGLHQVFILLN*AIFEARVLNPD Trigger: GTCTGGGTTTAGAACTCTTGCCTCAAAAATGGCTCAATTCAGCAGAATAAAGACCTGATGAAGACCAATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCTCTATTGATCTTAGCTATCTTCATGATTCTCACGCTTCTCTTTGTCCTTTTTCACTTACCCAGTaGCTAGTGGAGACAAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: FSSIDLSYLHDSHASLCPFSLTQ*LVETRI Trigger: TATTCTTGTCTCCACTAGCAACTGGGTAAGTGAAAA...AGGACAAAGAGAAGCGTGAGAATCATGAAGATAGCTAAGATCAATAGAGGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATTCTGCTCCTTTTTCATaGGGCAAAATCCATCATAGT | + |
|
Preference number: 3 (lower is better) Translates to: PSFILFTIPSSTEVNQGHSAPFS*GKIHHS Trigger: ACTATGATGGATTTTGCCCAATGAAAAAGGAGCAGA...ATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR TCA 72 bp | ATGCATACAGCCTTCTGTAAGGACAAGACCAAGGGCTaGAAGTCTTTAATTGCAGCAGCAAAATCTTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: MHTAFCKDKTKG*KSLIAAAKSYK Trigger: TTTATAAGATTTTGCTGCTGCAATTAAAGACTTTCAGCCCTTGGTCTTGTCCTTACAGAAGGCTGTATGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR CCA 72 bp | GAATGTTTACATGAATATCCATTAGGAGTAATTATCTaGCTAAACATCTACCATCTGTCTCAGCTCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: ECLHEYPLGVII*LNIYHLSQLHR Trigger: CCTGTGGAGCTGAGACAGATGGTAGATGTTTAGCCAGATAATTACTCCTAATGGATATTCATGTAAACATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| CDS-3UTR CCA 90 bp | AGGCCAGCCCGGGCGTGGGATGTTCCTTTTTCTCTTAGGTTTTTCTTCAGGCAGGTTGGAAAGCATCTTTaGGACTGTAGAAGAGATATA | + |
|
Preference number: 4 (lower is better) Translates to: RPARAWDVPFSLRFFFRQVGKHL*DCRRDI Trigger: TATATCTCTTCTACAGTCCCAAAGATGCTTTCCAAC...CTGCCTGAAGAAAAACCTAAGAGAAAAAGGAACATCCCACGCCCGGGCTGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGCACAGCCAAGTCAATGTTAATTTTATTCCTTCTAACAGGAGGTGTCAGGAGCCACCAGAGCTaGAACTCAAATATACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGGTAKSMLILFLLTGGVRSHQS*NSNIQK Trigger: CTTTTGTATATTTGAGTTCCAGCTCTGGTGGCTCCT...GACACCTCCTGTTAGAAGGAATAAAATTAACATTGACTTGGCTGTGCCTCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| CDS-3UTR CCA 90 bp | CAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATCCAAATCTATCAAAGCTaGAGGAGCCACCAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QALFCLLFHHPQRSTKVIQIYQS*RSHQSW Trigger: CCAGCTCTGGTGGCTCCTCCAGCTTTGATAGATTTG...GATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| CDS-3UTR GCA 90 bp | CAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATCAGAACCCATGATTCCTaGTGTGTAGCTTCCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: QALFCLLFHHPQRSTKVIRTHDS*CVASHH Trigger: GTGATGGGAAGCTACACAGCAGGAATCATGGGTTCT...GATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR CAA 72 bp | GAGTGGCCTATCTCTGAAGATTTCTTCCCACAAGTTTaGTATCACCTCTGCTCCTTTTTCATTGGGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EWPISEDFFPQV*YHLCSFFIGQN Trigger: ATTTTGCCCAATGAAAAAGGAGCAGAGGTGATACAAAACTTGTGGGAAGAAATCTTCAGAGATAGGCCACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR CAA 72 bp | TCCATCATCCACAGAGGTCAACCAAGGTCATCGAAATaGATCCTCTCTACTGATAGAGAAATATCTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: SIIHRGQPRSSK*ILSTDREISAT Trigger: TGTTGCAGATATTTCTCTATCAGTAGAGAGGATCAATTTCGATGACCTTGGTTGACCTCTGTGGATGATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTCTATTGATCTTAGCTATCTTCATGATTCTCACGCTTCTCTTTGTCCTAGCAGTGCTGTGATTTaGGGGAAATCAGAGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSSIDLSYLHDSHASLCPSSAVI*GKSENP Trigger: AGGATTCTCTGATTTCCCCCAAATCACAGCACTGCT...AGGACAAAGAGAAGCGTGAGAATCATGAAGATAGCTAAGATCAATAGAGGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATTTTCCTGGAAGAGGTTaGAAAGCATCTTTGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PSFILFTIPSSTEVNQGHFPGRG*KASLGL Trigger: CAGTCCCAAAGATGCTTTCCAACCTCTTCCAGGAAA...ATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR CAA 72 bp | TTTGTCTATATGGCATCACTACAAGATAGTACATATTaGTGGATCTGCAGAGATCTGCTTCAAAGGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FVYMASLQDSTY*WICRDLLQRGC Trigger: ACACCCCCTTTGAAGCAGATCTCTGCAGATCCACAAATATGTACTATCTTGTAGTGATGCCATATAGACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| CDS-3UTR TCA 90 bp | CAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATCGCAAACATAAAGTATTaGACTATGCAGCCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QALFCLLFHHPQRSTKVIANIKY*TMQPTK Trigger: CTTTGTGGGCTGCATAGTTCAATACTTTATGTTTGC...GATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| CDS-3UTR GCA 90 bp | CCAAGCTTTATTTTGTTTACTATTCCATCATCCACAGAGGTCAACCAAGGTCATCATAACAAAAAGCAGTaGTGTGATTTGGGGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: PSFILFTIPSSTEVNQGHHNKKQ*CDLGEI Trigger: GATTTCCCCCAAATCACAGCACTGCTTTTTGTTATG...ATGACCTTGGTTGACCTCTGTGGATGATGGAATAGTAAACAAAATAAAGCTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| 3UTR CAA 72 bp | TCAATGTTAATTTTATTCCTTCTAACAGGAGGTGTCTaGCTCAGAAACAAAGAACATTGGTCTTCATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMLILFLLTGGV*LRNKEHWSSSG Trigger: ACCTGATGAAGACCAATGTTCTTTGTTTCTGAGCAAGACACCTCCTGTTAGAAGGAATAAAATTAACATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGGCACAGCCAAGTCAATGTTAATTTTATTCCTTCTAACAGGAGGTGTCCACAAAGCTGATAGTTaGCTTTTCCTGGAAGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PGGTAKSMLILFLLTGGVHKADS*LFLEEV Trigger: AACCTCTTCCAGGAAAAGCAAACTATCAGCTTTGTG...GACACCTCCTGTTAGAAGGAATAAAATTAACATTGACTTGGCTGTGCCTCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207241.3 |
||
| CDS CCA 90 bp | GTAATATACAGGATGAGGAACATAACAAAAAGCAGTGCTGTGATTTaGGGGAAATCAGAGAATCCTAGGAGGATGAATTCGGTGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VIYRMRNITKSSAVI*GKSENPRRMNSVIS Trigger: TGAGATCACCGAATTCATCCTCCTAGGATTCTCTGATTTCCCCCAAATCACAGCACTGCTTTTTGTTATGTTCCTCATCCTGTATATTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052558.4 ENSMUST00000207241.3 |
||
| CDS TCA 72 bp | TTCCCATCACCATCTGAGCGCAAAGTGTGGGTGACATaGCTGATGAGTACAGAAGAGGGTTACAAATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FPSPSERKVWVT*LMSTEEGYKWQ Trigger: CTGCCATTTGTAACCCTCTTCTGTACTCATCAGTCATGTCACCCACACTTTGCGCTCAGATGGTGATGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052558.4 ENSMUST00000207241.3 |
||
| CDS CCA 72 bp | ACTATGCAGCCCACAAAGCTGATAGTTTGCTTTTCCTaGAAGAGGTTGGAAAGCATCTTTGGGACTGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TMQPTKLIVCFS*KRLESIFGTVE Trigger: TTCTACAGTCCCAAAGATGCTTTCCAACCTCTTCCAGGAAAAGCAAACTATCAGCTTTGTGGGCTGCATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052558.4 ENSMUST00000207241.3 |
||
| CDS CCA 72 bp | ACACAGTGTAGAAGACAGACACAAATCTATCAAAGCTaGAGGAGCCACCAGAGCTGGAACTCAAATATACAA | + |
|
Preference number: 6 (lower is better) Translates to: TQCRRQTQIYQS*RSHQSWNSNIQ Trigger: TTGTATATTTGAGTTCCAGCTCTGGTGGCTCCTCCAGCTTTGATAGATTTGTGTCTGTCTTCTACACTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052558.4 ENSMUST00000207241.3 |
||
| CDS CAA 90 bp | GGCAAACATAAAGTATTGAACTATGCAGCCCACAAAGCTGATAGTTaGCTTTTCCTGGAAGAGGTTGGAAAGCATCTTTGGGACTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: GKHKVLNYAAHKADS*LFLEEVGKHLWDCR Trigger: TCTACAGTCCCAAAGATGCTTTCCAACCTCTTCCAGGAAAAGCAAACTATCAGCTTTGTGGGCTGCATAGTTCAATACTTTATGTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052558.4 ENSMUST00000207241.3 |
||
| CDS CAA 90 bp | CATGAGGCAAGATTCACTCAGTCCCATTGTGGCAAACATAAAGTATaGAACTATGCAGCCCACAAAGCTGATAGTTTGCTTTTCCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HEARFTQSHCGKHKV*NYAAHKADSLLFLE Trigger: TTCCAGGAAAAGCAAACTATCAGCTTTGTGGGCTGCATAGTTCAATACTTTATGTTTGCCACAATGGGACTGAGTGAATCTTGCCTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052558.4 ENSMUST00000207241.3 |
||