Pregenerated sensors for OLFR1434 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095640Ensembl transcript IDs: ENSMUST00000207186.4, ENSMUST00000207915.2, ENSMUST00000208197.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAATTCTTCACTCCAGCATATTTGACCAACAAGCAACTGCCCTCCTaGGGAGTTTCAGCCCCTAGTCAATCATGCACATCCTATGTATTC | + |
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Preference number: 1 (lower is better) Translates to: EFFTPAYLTNKQLPS*GVSAPSQSCTSYVF Trigger: GAATACATAGGATGTGCATGATTGACTAGGGGCTGAAACTCCCCAGGAGGGCAGTTGCTTGTTGGTCAAATATGCTGGAGTGAAGAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR CCA 90 bp | AAGCTAATGTGTGGCTTTGTTTCTTTCAAACAAAAACTTTCCACATaGTCATCCTCACCTGCTCAGGATCACAGAGTAATCAATGGTGAT | + |
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Preference number: 1 (lower is better) Translates to: KLMCGFVSFKQKLST*SSSPAQDHRVINGD Trigger: ATCACCATTGATTACTCTGTGATCCTGAGCAGGTGAGGATGACCATGTGGAAAGTTTTTGTTTGAAAGAAACAAAGCCACACATTAGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR CCA 90 bp | TCTGTAAGGCACTTCTGCTTCATGATGATGAAGCTCATGTCTACCTaGAGAAAACAGTTCCAATGCAATACTGAGAAATATCAACTTAAA | + |
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Preference number: 1 (lower is better) Translates to: SVRHFCFMMMKLMST*RKQFQCNTEKYQLK Trigger: TTTAAGTTGATATTTCTCAGTATTGCATTGGAACTGTTTTCTCCAGGTAGACATGAGCTTCATCATCATGAAGCAGAAGTGCCTTACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR CCA 90 bp | TTATTTCTGATTAGTCTTCCTAAAAGGCACAAGAAAGCTAATGTGTaGCTTTGTTTCTTTCAAACAAAAACTTTCCACATGGTCATCCTC | + |
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Preference number: 1 (lower is better) Translates to: LFLISLPKRHKKANV*LCFFQTKTFHMVIL Trigger: GAGGATGACCATGTGGAAAGTTTTTGTTTGAAAGAAACAAAGCCACACATTAGCTTTCTTGTGCCTTTTAGGAAGACTAATCAGAAATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR CAA 90 bp | GACTGGAGCAGCAGCATCAACAATGAATTCTTCACTCCAGCATATTaGACCAACAAGCAACTGCCCTCCTGGGGAGTTTCAGCCCCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: DWSSSINNEFFTPAY*TNKQLPSWGVSAPS Trigger: ACTAGGGGCTGAAACTCCCCAGGAGGGCAGTTGCTTGTTGGTCAAATATGCTGGAGTGAAGAATTCATTGTTGATGCTGCTGCTCCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR-3UTR TCA 90 bp | AACTGCCCTCCTGGGGAGTTTCAGCCCCTAGTCAATCATGCACATCCTATGTATCTGAGGTCAGGGATTTaGTCAGGAATCTTCTCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: NCPPGEFQPLVNHAHPMYLRSGI*SGIFSK Trigger: TTTAGAGAAGATTCCTGATCAAATCCCTGACCTCAG...ATACATAGGATGTGCATGATTGACTAGGGGCTGAAACTCCCCAGGAGGGCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGATGAATATAATCTCAGGCAAGGGTGTTGTGATGCCATGTTTCAAGAAGAGCCCATGGAAATCCTATaGCCTATTAAAGCTGGAATT | + |
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Preference number: 2 (lower is better) Translates to: TDEYNLRQGCCDAMFQEEPMEIL*PIKAGI Trigger: AATTCCAGCTTTAATAGGGCATAGGATTTCCATGGG...CTCTTCTTGAAACATGGCATCACAACACCCTTGCCTGAGATTATATTCATCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR-3UTR CCA 90 bp | GAATATAATCTCAGGCAAGGGTGTTGTGATGCCATGTTTCAAGAAGAGAGTTTGTTGGAATGTTCTGATTaGCTCTATCAATCCAGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: EYNLRQGCCDAMFQEESLLECSD*LYQSRV Trigger: TACCCTGGATTGATAGAGCCAATCAGAACATTCCAA...CAAACTCTCTTCTTGAAACATGGCATCACAACACCCTTGCCTGAGATTATATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR-3UTR CCA 90 bp | CCATGTTTCAAGAAGAGAGTTTGTTTGCATAGATTTGTTTGTGACATTGTCTCCAAGCTCATGTCTACCTaGAGAAAACAGTTCCAATGC | + |
|
Preference number: 2 (lower is better) Translates to: PCFKKRVCLHRFVCDIVSKLMST*RKQFQC Trigger: GCATTGGAACTGTTTTCTCCAGGTAGACATGAGCTT...GGAGACAATGTCACAAACAAATCTATGCAAACAAACTCTCTTCTTGAAACATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR CCA 72 bp | ACTCCAGCATATTTGACCAACAAGCAACTGCCCTCCTaGGGAGTTTCAGCCCCTAGTCAATCATGCACATCC | + |
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Preference number: 3 (lower is better) Translates to: TPAYLTNKQLPS*GVSAPSQSCTS Trigger: GGATGTGCATGATTGACTAGGGGCTGAAACTCCCCAGGAGGGCAGTTGCTTGTTGGTCAAATATGCTGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR TCA 72 bp | GCAGCATCAACAATGAATTCTTCACTCCAGCATATTTaGCCAACAAGCAACTGCCCTCCTGGGGAGTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: AASTMNSSLQHI*PTSNCPPGEFQ Trigger: CTGAAACTCCCCAGGAGGGCAGTTGCTTGTTGGTCAAATATGCTGGAGTGAAGAATTCATTGTTGATGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR CCA 72 bp | CTATGTATTCAGGGAGTAAAACAAACCAACCACATGTaGTCTTATATGAAACTGGGAGTGGGGAGGAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LCIQGVKQTNHM*SYMKLGVGRKD Trigger: GTCCTTCCTCCCCACTCCCAGTTTCATATAAGACCACATGTGGTTGGTTTGTTTTACTCCCTGAATACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR-3UTR CAA 90 bp | AACTGGGAGTGGGGAGGAAGGACTGATGAATATAATCTCAGGCAAGGGTGTTGTTTTGTTTGCATAGATTaGTTTGTGACATTGTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: NWEWGGRTDEYNLRQGCCFVCID*FVTLSP Trigger: GGGAGACAATGTCACAAACAAATCTATGCAAACAAA...ACAACACCCTTGCCTGAGATTATATTCATCAGTCCTTCCTCCCCACTCCCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR TCA 72 bp | TGCCATGGACTTTGTAGTATTCCAGCCATGTGTACATaGTTGCAGGTAACAGTAATTCTCACATGGTGTTGT | + |
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Preference number: 3 (lower is better) Translates to: CHGLCSIPAMCT*LQVTVILTWCC Trigger: ACAACACCATGTGAGAATTACTGTTACCTGCAATCATGTACACATGGCTGGAATACTACAAAGTCCATGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| 3UTR CCA 72 bp | TGTGGCTTTGTTTCTTTCAAACAAAAACTTTCCACATaGTCATCCTCACCTGCTCAGGATCACAGAGTAATC | + |
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Preference number: 3 (lower is better) Translates to: CGFVSFKQKLST*SSSPAQDHRVI Trigger: GATTACTCTGTGATCCTGAGCAGGTGAGGATGACCATGTGGAAAGTTTTTGTTTGAAAGAAACAAAGCCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR CCA 72 bp | CACTTCTGCTTCATGATGATGAAGCTCATGTCTACCTaGAGAAAACAGTTCCAATGCAATACTGAGAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: HFCFMMMKLMST*RKQFQCNTEKY Trigger: ATATTTCTCAGTATTGCATTGGAACTGTTTTCTCCAGGTAGACATGAGCTTCATCATCATGAAGCAGAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR CCA 90 bp | AACTGCCCTCCTGGGGAGTTTCAGCCCCTAGTCAATCATGCACATCCTATGTATTTAGATCCACAGAAGTaGAGCTGCAGCAAGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: NCPPGEFQPLVNHAHPMYLDPQK*SCSKTH Trigger: ATGTGTCTTGCTGCAGCTCCACTTCTGTGGATCTAA...ATACATAGGATGTGCATGATTGACTAGGGGCTGAAACTCCCCAGGAGGGCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR TCA 90 bp | ACTGATGAATATAATCTCAGGCAAGGGTGTTGTGATGCCATGTTTCAAGAAGAGAGGCCATGGCTGTCATaGGGCAAGATTCACTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TDEYNLRQGCCDAMFQEERPWLS*GKIHSV Trigger: GACTGAGTGAATCTTGCCTCATGACAGCCATGGCCT...CTCTTCTTGAAACATGGCATCACAACACCCTTGCCTGAGATTATATTCATCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR TCA 90 bp | AAAATCAAACTATCAGAAGACGAAGGAAATGACACTGAAGAAACCACGCCTTCCGAGAAGCACAGGTGTTaGAGGCCTTGGACCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KIKLSEDEGNDTEETTPSEKHRC*RPWTYH Trigger: ATGGTAGGTCCAAGGCCTTCAACACCTGTGCTTCTC...GGAAGGCGTGGTTTCTTCAGTGTCATTTCCTTCGTCTTCTGATAGTTTGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR CCA 90 bp | ACTGATGAATATAATCTCAGGCAAGGGTGTTGTGATGCCATGTTTCAAGAAGAGCAAATCTGTCAAAGCTaGAGGAGCCACCAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDEYNLRQGCCDAMFQEEQICQS*RSHQSW Trigger: CCAGCTCTGGTGGCTCCTCCAGCTTTGACAGATTTG...CTCTTCTTGAAACATGGCATCACAACACCCTTGCCTGAGATTATATTCATCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| 3UTR CAA 72 bp | AGCAGCATCAACAATGAATTCTTCACTCCAGCATATTaGACCAACAAGCAACTGCCCTCCTGGGGAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSINNEFFTPAY*TNKQLPSWGVS Trigger: TGAAACTCCCCAGGAGGGCAGTTGCTTGTTGGTCAAATATGCTGGAGTGAAGAATTCATTGTTGATGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR CCA 90 bp | GAATATAATCTCAGGCAAGGGTGTTGTGATGCCATGTTTCAAGAAGAGAGTTTGAGCAGTGCTGTGATTTaGGGGAAATCGGAGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: EYNLRQGCCDAMFQEESLSSAVI*GKSENP Trigger: GGGATTCTCCGATTTCCCCCAAATCACAGCACTGCT...CAAACTCTCTTCTTGAAACATGGCATCACAACACCCTTGCCTGAGATTATATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR TCA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACAAGGCCATGGCTGTCATaGGGCAAGATTCACTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTRPWLS*GKIHSV Trigger: GACTGAGTGAATCTTGCCTCATGACAGCCATGGCCT...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS-3UTR TCA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACAGAGAAGCACAGGTGTTaGAGGCCTTGGACCTACCAT | + |
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Preference number: 4 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTEKHRC*RPWTYH Trigger: ATGGTAGGTCCAAGGCCTTCAACACCTGTGCTTCTC...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS-3UTR CCA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACACAAATCTGTCAAAGCTaGAGGAGCCACCAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTQICQS*RSHQSW Trigger: CCAGCTCTGGTGGCTCCTCCAGCTTTGACAGATTTG...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS-3UTR TCA 90 bp | AAAATCAAACTATCAGAAGACGAAGGAAATGACACTGAAGAAACCACGCCTTCCGGACCTACCATTTGCTaGAGTGATCTTCATGATGGA | + |
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Preference number: 4 (lower is better) Translates to: KIKLSEDEGNDTEETTPSGPTIC*SDLHDG Trigger: TCCATCATGAAGATCACTTCAGCAAATGGTAGGTCC...GGAAGGCGTGGTTTCTTCAGTGTCATTTCCTTCGTCTTCTGATAGTTTGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR CCA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACAAGCAGTGCTGTGATTTaGGGGAAATCGGAGAATCCC | + |
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Preference number: 4 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTSSAVI*GKSENP Trigger: GGGATTCTCCGATTTCCCCCAAATCACAGCACTGCT...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS-3UTR CCA 90 bp | AAAATCAAACTATCAGAAGACGAAGGAAATGACACTGAAGAAACCACGCCTTCCAGGAGCCACCAGAGCTaGAACTCAAATAGACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: KIKLSEDEGNDTEETTPSRSHQS*NSNRQR Trigger: TCTTTGTCTATTTGAGTTCCAGCTCTGGTGGCTCCT...GGAAGGCGTGGTTTCTTCAGTGTCATTTCCTTCGTCTTCTGATAGTTTGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR TCA 90 bp | TGTAGAAAAAGAAGAGACATCAGGTCCCACTATCTCATATATTACTATTGGCTCCAAAAAGCAGTGCTGTaGTTTGGGGGAAATCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: CRKRRDIRSHYLIYYYWLQKAVL*FGGNRR Trigger: TCTCCGATTTCCCCCAAATCACAGCACTGCTTTTTG...GAGCCAATAGTAATATATGAGATAGTGGGACCTGATGTCTCTTCTTTTTCTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR TCA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACACAAAAAGCAGTGCTGTaGTTTGGGGGAAATCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTQKAVL*FGGNRR Trigger: TCTCCGATTTCCCCCAAATCACAGCACTGCTTTTTG...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS-3UTR TCA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACAGGACCTACCATTTGCTaGAGTGATCTTCATGATGGA | + |
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Preference number: 4 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTGPTIC*SDLHDG Trigger: TCCATCATGAAGATCACTTCAGCAAATGGTAGGTCC...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS-3UTR GCA 90 bp | CCATGTTTCAAGAAGAGAGTTTGTTTGCATAGATTTGTTTGTGACATTGTCTCCAGAACTTACAAGTCCTaGTGTGTAGCTTCCCATCAC | + |
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Preference number: 4 (lower is better) Translates to: PCFKKRVCLHRFVCDIVSRTYKS*CVASHH Trigger: GTGATGGGAAGCTACACAGCAGGACTTGTAAGTTCT...GGAGACAATGTCACAAACAAATCTATGCAAACAAACTCTCTTCTTGAAACATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR GCA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACAAGAACTTACAAGTCCTaGTGTGTAGCTTCCCATCAC | + |
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Preference number: 4 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTRTYKS*CVASHH Trigger: GTGATGGGAAGCTACACAGCAGGACTTGTAAGTTCT...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS-3UTR CCA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACATTAGATCCACAGAAGTaGAGCTGCAGCAAGACACAT | + |
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Preference number: 4 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTLDPQK*SCSKTH Trigger: ATGTGTCTTGCTGCAGCTCCACTTCTGTGGATCTAA...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| 3UTR CAA 72 bp | GGTGTTGTGATGCCATGTTTCAAGAAGAGAGTTTGTTaGCATAGATTTGTTTGTGACATTGTCTCCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GVVMPCFKKRVC*HRFVCDIVSLC Trigger: ACAGAGGGAGACAATGTCACAAACAAATCTATGCAAACAAACTCTCTTCTTGAAACATGGCATCACAACACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR TCA 90 bp | AAAATCAAACTATCAGAAGACGAAGGAAATGACACTGAAGAAACCACGCCTTCCGAAAAGATAAAGTATTaGACTATGCAGCCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: KIKLSEDEGNDTEETTPSEKIKY*TMQPTK Trigger: CTTTGTGGGCTGCATAGTTCAATACTTTATCTTTTC...GGAAGGCGTGGTTTCTTCAGTGTCATTTCCTTCGTCTTCTGATAGTTTGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR GCA 90 bp | AAAATCAAACTATCAGAAGACGAAGGAAATGACACTGAAGAAACCACGCCTTCCACTATAGAAGACAGATaGAAATCTGTCAAAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KIKLSEDEGNDTEETTPSTIEDR*KSVKAG Trigger: TCCAGCTTTGACAGATTTGCATCTGTCTTCTATAGT...GGAAGGCGTGGTTTCTTCAGTGTCATTTCCTTCGTCTTCTGATAGTTTGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR TCA 90 bp | GGACATGCTTATCTCTGTACTATTATAATATTTAGCTCCCATGGCTGTGAACCACCCAGGAGGATAAATTaGGTGATCTTGGTAATATTT | + |
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Preference number: 4 (lower is better) Translates to: GHAYLCTIIIFSSHGCEPPRRIN*VILVIF Trigger: AAATATTACCAAGATCACTCAATTTATCCTCCTGGG...TGGTTCACAGCCATGGGAGCTAAATATTATAATAGTACAGAGATAAGCATGTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR TCA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACACCCAGGAGGATAAATTaGGTGATCTTGGTAATATTT | + |
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Preference number: 4 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTPRRIN*VILVIF Trigger: AAATATTACCAAGATCACTCAATTTATCCTCCTGGG...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS-3UTR GCA 90 bp | CCATGTTTCAAGAAGAGAGTTTGTTTGCATAGATTTGTTTGTGACATTGTCTCCCAAAGAAAGTGTCATTaGAGGATAGATTTAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: PCFKKRVCLHRFVCDIVSQRKCH*RIDLTA Trigger: AGCTGTTAAATCTATCCTGCAATGACACTTTCTTTG...GGAGACAATGTCACAAACAAATCTATGCAAACAAACTCTCTTCTTGAAACATGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR GCA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACACAAAGAAAGTGTCATTaGAGGATAGATTTAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTQRKCH*RIDLTA Trigger: AGCTGTTAAATCTATCCTGCAATGACACTTTCTTTG...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS-3UTR CAA 90 bp | TGCCCTCCTGGGGAGTTTCAGCCCCTAGTCAATCATGCACATCCTATGTATTCAGCAAAGAAAGTGTCATaGCAGGATAGATTTAACAGC | + |
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Preference number: 5 (lower is better) Translates to: CPPGEFQPLVNHAHPMYSAKKVS*QDRFNS Trigger: GCTGTTAAATCTATCCTGCAATGACACTTTCTTTGC...TGAATACATAGGATGTGCATGATTGACTAGGGGCTGAAACTCCCCAGGAGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR CAA 90 bp | GAATATAATCTCAGGCAAGGGTGTTGTGATGCCATGTTTCAAGAAGAGAGTTTGCAGGTGTTGAAGGCCTaGGACCTACCATTTGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: EYNLRQGCCDAMFQEESLQVLKA*DLPFAE Trigger: TTCAGCAAATGGTAGGTCCAAGGCCTTCAACACCTG...CAAACTCTCTTCTTGAAACATGGCATCACAACACCCTTGCCTGAGATTATATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR CAA 90 bp | AACTGGGAGTGGGGAGGAAGGACTGATGAATATAATCTCAGGCAAGGGTGTTGTTCCCAGGAGGATAAATaGAGTGATCTTGGTAATATT | + |
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Preference number: 5 (lower is better) Translates to: NWEWGGRTDEYNLRQGCCSQEDK*SDLGNI Trigger: AATATTACCAAGATCACTCAATTTATCCTCCTGGGA...ACAACACCCTTGCCTGAGATTATATTCATCAGTCCTTCCTCCCCACTCCCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR CAA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACACAGGTGTTGAAGGCCTaGGACCTACCATTTGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTQVLKA*DLPFAE Trigger: TTCAGCAAATGGTAGGTCCAAGGCCTTCAACACCTG...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS TCA 90 bp | ATGAGGCAAGATTCACTCAGTCCCATAGTGGAAAAGATAAAGTATTaGACTATGCAGCCCACAAAGCTGATAGTTTGCTTTTCCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: MRQDSLSPIVEKIKY*TMQPTKLIVCFSWK Trigger: CTTCCAGGAAAAGCAAACTATCAGCTTTGTGGGCTGCATAGTTCAATACTTTATCTTTTCCACTATGGGACTGAGTGAATCTTGCCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207186.4 ENSMUST00000207915.2 ENSMUST00000208197.2 |
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| CDS-3UTR CAA 90 bp | GAATATAATCTCAGGCAAGGGTGTTGTGATGCCATGTTTCAAGAAGAGAGTTTGGGAAAAGATAAAGTATaGAACTATGCAGCCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: EYNLRQGCCDAMFQEESLGKDKV*NYAAHK Trigger: TTTGTGGGCTGCATAGTTCAATACTTTATCTTTTCC...CAAACTCTCTTCTTGAAACATGGCATCACAACACCCTTGCCTGAGATTATATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207186.4 |
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| CDS-3UTR CAA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACATCCCAGGAGGATAAATaGAGTGATCTTGGTAATATT | + |
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Preference number: 5 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTSQEDK*SDLGNI Trigger: AATATTACCAAGATCACTCAATTTATCCTCCTGGGA...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS-3UTR CAA 90 bp | AATCATTTTTATCTGAAGTGCCATGGACTTTGTAGTATTCCAGCCATGTGTACAGGAAAAGATAAAGTATaGAACTATGCAGCCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: NHFYLKCHGLCSIPAMCTGKDKV*NYAAHK Trigger: TTTGTGGGCTGCATAGTTCAATACTTTATCTTTTCC...TGTACACATGGCTGGAATACTACAAAGTCCATGGCACTTCAGATAAAAATGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS CCA 72 bp | CCACACTATAGAAGACAGATGCAAATCTGTCAAAGCTaGAGGAGCCACCAGAGCTGGAACTCAAATAGACAA | + |
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Preference number: 6 (lower is better) Translates to: PHYRRQMQICQS*RSHQSWNSNRQ Trigger: TTGTCTATTTGAGTTCCAGCTCTGGTGGCTCCTCCAGCTTTGACAGATTTGCATCTGTCTTCTATAGTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207186.4 ENSMUST00000208197.2 |
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| CDS CAA 72 bp | AAAGTATTGAACTATGCAGCCCACAAAGCTGATAGTTaGCTTTTCCTGGAAGAGGTTGGAAAGCATCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: KVLNYAAHKADS*LFLEEVGKHLW Trigger: CCAAAGATGCTTTCCAACCTCTTCCAGGAAAAGCAAACTATCAGCTTTGTGGGCTGCATAGTTCAATACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207186.4 ENSMUST00000207915.2 ENSMUST00000208197.2 |
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| CDS CAA 90 bp | GGAAAAGATAAAGTATTGAACTATGCAGCCCACAAAGCTGATAGTTaGCTTTTCCTGGAAGAGGTTGGAAAGCATCTTTGGGACTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GKDKVLNYAAHKADS*LFLEEVGKHLWDCR Trigger: TCTACAGTCCCAAAGATGCTTTCCAACCTCTTCCAGGAAAAGCAAACTATCAGCTTTGTGGGCTGCATAGTTCAATACTTTATCTTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207186.4 ENSMUST00000207915.2 ENSMUST00000208197.2 |
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| CDS CAA 90 bp | CATGAGGCAAGATTCACTCAGTCCCATAGTGGAAAAGATAAAGTATaGAACTATGCAGCCCACAAAGCTGATAGTTTGCTTTTCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: HEARFTQSHSGKDKV*NYAAHKADSLLFLE Trigger: TTCCAGGAAAAGCAAACTATCAGCTTTGTGGGCTGCATAGTTCAATACTTTATCTTTTCCACTATGGGACTGAGTGAATCTTGCCTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207186.4 ENSMUST00000207915.2 ENSMUST00000208197.2 |
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