Pregenerated sensors for OLFR143 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094778Ensembl transcript IDs: ENSMUST00000213129.2
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCCTGGACAAAAACAGACTCTAATACACAGCTAACAGCAAGATGGGCAGGGAACTTCCCGGCATCTAGATaGTGGTTCCCATCTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SWTKTDSNTQLTARWAGNFPASR*WFPSAC Trigger: GCAGGCAGATGGGAACCACCATCTAGATGCCGGGAA...GTTCCCTGCCCATCTTGCTGTTAGCTGTGTATTAGAGTCTGTTTTTGTCCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAAACGTGTGGTCTTGCAGTATTCATGTGAGCATATCCTCAACTACATACCCGGCATCTAGATGGTaGTTCCCATCTGCCTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: IKNVWSCSIHVSISSTTYPASRW*FPSACN Trigger: GTTGCAGGCAGATGGGAACCACCATCTAGATGCCGG...GTATGTAGTTGAGGATATGCTCACATGAATACTGCAAGACCACACGTTTTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGACAAAAACAGACTCTAATACACAGCTAACAGCAAGATGGGCAGGGAACAAATGGAGATACATGTaGAGAGGAATAGCCCTAACG | + |
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Preference number: 2 (lower is better) Translates to: SWTKTDSNTQLTARWAGNKWRYM*RGIALT Trigger: CGTTAGGGCTATTCCTCTGCACATGTATCTCCATTT...GTTCCCTGCCCATCTTGCTGTTAGCTGTGTATTAGAGTCTGTTTTTGTCCAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATGCATGAACTGTATCAATATGTCTTTATCCCACATGCTGCTTGTTTTGCCATAGACAATGTGGGATaGGAAGAGGGTTCAGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: QMHELYQYVFIPHAACFAIDNVG*EEGSAV Trigger: AACAGCTGAACCCTCTTCTCATCCCACATTGTCTAT...GGCAAAACAAGCAGCATGTGGGATAAAGACATATTGATACAGTTCATGCATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| 3UTR-3UTR GCA 90 bp | CAAATGCATGAACTGTATCAATATGTCTTTATCCCACATGCTGCTTGTTTTGCCTGGTTCCCATCTGCCTaGAACTCTACTTCTAGTATC | + |
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Preference number: 2 (lower is better) Translates to: QMHELYQYVFIPHAACFAWFPSA*NSTSSI Trigger: GATACTAGAAGTAGAGTTGCAGGCAGATGGGAACCA...GGCAAAACAAGCAGCATGTGGGATAAAGACATATTGATACAGTTCATGCATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGAAAAAGAGAAAAAGTTGGTCCTGATATCTTGTAGACAAGCTCTCTGCTACTGTCTTTATCCCACATaGTGCTTGTTTTGCCGAAAA | + |
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Preference number: 2 (lower is better) Translates to: KEKEKKLVLISCRQALCYCLYPT*CLFCRK Trigger: TTTTCGGCAAAACAAGCAGCATGTGGGATAAAGACA...GTAGCAGAGAGCTTGTCTACAAGATATCAGGACCAACTTTTTCTCTTTTTCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| 3UTR-3UTR TCA 90 bp | TACATGTGCAGAGGAATAGCCCTAACGTATACTCTGATAACCATAAAGGTAAAATCTACTTCTAGTATCTaGAACCCTCTTCTATTCAAG | + |
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Preference number: 2 (lower is better) Translates to: YMCRGIALTYTLITIKVKSTSSI*NPLLFK Trigger: CTTGAATAGAAGAGGGTTTCAGATACTAGAAGTAGA...TTTTACCTTTATGGTTATCAGAGTATACGTTAGGGCTATTCCTCTGCACATGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATGCATGAACTGTATCAATATGTCTTTATCCCACATGCTGCTTGTTTTGCCCAGAGTTACATTGCATaGTTTAAAGAGAAGACATGT | + |
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Preference number: 2 (lower is better) Translates to: QMHELYQYVFIPHAACFAQSYIA*FKEKTC Trigger: ACATGTCTTCTCTTTAAACCATGCAATGTAACTCTG...GGCAAAACAAGCAGCATGTGGGATAAAGACATATTGATACAGTTCATGCATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| 3UTR CCA 72 bp | AAAAAGGTTTGTATTCCTTTCCCGGCATCTAGATGGTaGTTCCCATCTGCCTGCAACTCTACTTCTAGTATC | + |
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Preference number: 3 (lower is better) Translates to: KKVCIPFPASRW*FPSACNSTSSI Trigger: GATACTAGAAGTAGAGTTGCAGGCAGATGGGAACCACCATCTAGATGCCGGGAAAGGAATACAAACCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| 3UTR TCA 72 bp | ATCCCTCCTGGTCATAGAAATCCAGTCACAAATGCATaGACTGTATCAATATGTCTTTATCCCACATGCTGC | + |
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Preference number: 3 (lower is better) Translates to: IPPGHRNPVTNA*TVSICLYPTCC Trigger: GCAGCATGTGGGATAAAGACATATTGATACAGTTCATGCATTTGTGACTGGATTTCTATGACCAGGAGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| 3UTR TCA 72 bp | TACACAGCTAACAGCAAGATGGGCAGGGAACTTCATTaGGGGAAATTAAACACTTATCATCCACATGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: YTANSKMGRELH*GKLNTYHPHVC Trigger: ACAGACATGTGGATGATAAGTGTTTAATTTCCCTCAATGAAGTTCCCTGCCCATCTTGCTGTTAGCTGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| 3UTR-3UTR CAA 90 bp | CAAATGCATGAACTGTATCAATATGTCTTTATCCCACATGCTGCTTGTTTTGCCACTCACAGAGTTACATaGCATGGTTTAAAGAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: QMHELYQYVFIPHAACFATHRVT*HGLKRR Trigger: TCTTCTCTTTAAACCATGCAATGTAACTCTGTGAGT...GGCAAAACAAGCAGCATGTGGGATAAAGACATATTGATACAGTTCATGCATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| CDS-3UTR TCA 90 bp | CTAGATGGTGGTTCCCATCTGCCTGCAACTCTACTTCTAGTATCTGAAACCCTCAGGAAGAAAAATAACTaGGCCATGCATCCTCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: LDGGSHLPATLLLVSETLRKKNN*AMHPPK Trigger: TTTTGGAGGATGCATGGCTCAGTTATTTTTCTTCCT...GAGGGTTTCAGATACTAGAAGTAGAGTTGCAGGCAGATGGGAACCACCATCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGACAAAAACAGACTCTAATACACAGCTAACAGCAAGATGGGCAGGGAACGAGAAAAATTTTCCCTaGCCCACAGTCTTAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SWTKTDSNTQLTARWAGNEKNFP*PTVLAE Trigger: TTCTGCTAAGACTGTGGGCCAGGGAAAATTTTTCTC...GTTCCCTGCCCATCTTGCTGTTAGCTGTGTATTAGAGTCTGTTTTTGTCCAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| CDS-3UTR TCA 90 bp | CAAATGCATGAACTGTATCAATATGTCTTTATCCCACATGCTGCTTGTTTTGCCATCATACACCCTGTGTaGGCCATGGCACTAGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: QMHELYQYVFIPHAACFAIIHPV*AMALAN Trigger: GTTTGCTAGTGCCATGGCTCACACAGGGTGTATGAT...GGCAAAACAAGCAGCATGTGGGATAAAGACATATTGATACAGTTCATGCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| CDS-3UTR CCA 90 bp | CAAATGCATGAACTGTATCAATATGTCTTTATCCCACATGCTGCTTGTTTTGCCATGTGCCCAAGGCTTTaGACCAACCTTTACCTGATG | + |
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Preference number: 4 (lower is better) Translates to: QMHELYQYVFIPHAACFAMCPRL*TNLYLM Trigger: CATCAGGTAAAGGTTGGTCCAAAGCCTTGGGCACAT...GGCAAAACAAGCAGCATGTGGGATAAAGACATATTGATACAGTTCATGCATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| CDS-3UTR CCA 90 bp | ATCAAAAACGTGTGGTCTTGCAGTATTCATGTGAGCATATCCTCAACTACATACAGTCTTAGCAGAAGATaGTTTGACATAAGCAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: IKNVWSCSIHVSISSTTYSLSRR*FDISKQ Trigger: CTGCTTGCTTATGTCAAACCATCTTCTGCTAAGACT...GTATGTAGTTGAGGATATGCTCACATGAATACTGCAAGACCACACGTTTTTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| CDS-3UTR TCA 90 bp | TACATGTGCAGAGGAATAGCCCTAACGTATACTCTGATAACCATAAAGGTAAAAAAGTACATAGGAGTATaGAGGTTTGAGTTTAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: YMCRGIALTYTLITIKVKKYIGV*RFEFRQ Trigger: TTGCCTAAACTCAAACCTTCATACTCCTATGTACTT...TTTTACCTTTATGGTTATCAGAGTATACGTTAGGGCTATTCCTCTGCACATGTA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| CDS-3UTR CAA 90 bp | CTAGATGGTGGTTCCCATCTGCCTGCAACTCTACTTCTAGTATCTGAAACCCTCCATGTGCCCAAGGCTTaGGACCAACCTTTACCTGAT | + |
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Preference number: 5 (lower is better) Translates to: LDGGSHLPATLLLVSETLHVPKA*DQPLPD Trigger: ATCAGGTAAAGGTTGGTCCAAAGCCTTGGGCACATG...GAGGGTTTCAGATACTAGAAGTAGAGTTGCAGGCAGATGGGAACCACCATCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| CDS-3UTR CAA 90 bp | ATCAAAAACGTGTGGTCTTGCAGTATTCATGTGAGCATATCCTCAACTACATACCAGCTGGAGCTCAGGTaGGTCTGTCAATCCCATAAG | + |
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Preference number: 5 (lower is better) Translates to: IKNVWSCSIHVSISSTTYQLELR*VCQSHK Trigger: CTTATGGGATTGACAGACCAACCTGAGCTCCAGCTG...GTATGTAGTTGAGGATATGCTCACATGAATACTGCAAGACCACACGTTTTTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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| CDS-3UTR CAA 90 bp | TACATGTGCAGAGGAATAGCCCTAACGTATACTCTGATAACCATAAAGGTAAAAAAACTCATCAACATTTaGGGTGTAAAGACCATCGAA | + |
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Preference number: 5 (lower is better) Translates to: YMCRGIALTYTLITIKVKKLINI*GVKTIE Trigger: TTCGATGGTCTTTACACCCAAAATGTTGATGAGTTT...TTTTACCTTTATGGTTATCAGAGTATACGTTAGGGCTATTCCTCTGCACATGTA 37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000213129.2 |
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