Pregenerated sensors for OLFR1428 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067524Ensembl transcript IDs: ENSMUST00000087824.2, ENSMUST00000208391.3, ENSMUST00000214103.2
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGACAGGCATGTGTGTGTGTGTGGGAGTAGGAGGACTAGGGGAATaGGGGGAACGGGTGGGTGGGTGGAGTAACATCCTCTCAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: LTGMCVCVGVGGLGE*GERVGGWSNILSEA Trigger: TGCCTCTGAGAGGATGTTACTCCACCCACCCACCCGTTCCCCTCATTCCCCTAGTCCTCCTACTCCCACACACACACACATGCCTGTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR TCA 90 bp | TCTGATAACTTTGTGGACAGTAGTGCTGTCCTGTATCAAAGGTGGTaGAGCAAGGGAAGGGTTGGCAGGAGAGCAACAGATGACAGTGTA | + |
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Preference number: 1 (lower is better) Translates to: SDNFVDSSAVLYQRW*SKGRVGRRATDDSV Trigger: TACACTGTCATCTGTTGCTCTCCTGCCAACCCTTCCCTTGCTTCACCACCTTTGATACAGGACAGCACTACTGTCCACAAAGTTATCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR CCA 90 bp | TATTCAGAGACTAAACCACCAACCAAGAGCATACATGGGCTGGTTTaGCACATATGTAGCAGAGGACTGCATTGTCTGGCCTTAGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: YSETKPPTKSIHGLV*HICSRGLHCLALVE Trigger: TTCCACTAAGGCCAGACAATGCAGTCCTCTGCTACATATGTGCCAAACCAGCCCATGTATGCTCTTGGTTGGTGGTTTAGTCTCTGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR TCA 90 bp | TCAAAGGTGGTGAAGCAAGGGAAGGGTTGGCAGGAGAGCAACAGATaGCAGTGTAGTAGTGCTTATGGGACTGATTTCAATTATTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: SKVVKQGKGWQESNR*QCSSAYGTDFNYFA Trigger: TGCAAAATAATTGAAATCAGTCCCATAAGCACTACTACACTGTCATCTGTTGCTCTCCTGCCAACCCTTCCCTTGCTTCACCACCTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR TCA 90 bp | TGTACATGCATGTTTAGGAATGCAAGGAAAGCTAACAGGGAACATTaGATGCTTGATCCATATTGGCAGCCATCTGACTTTTATAACTGC | + |
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Preference number: 1 (lower is better) Translates to: CTCMFRNARKANREH*MLDPYWQPSDFYNC Trigger: GCAGTTATAAAAGTCAGATGGCTGCCAATATGGATCAAGCATTCAATGTTCCCTGTTAGCTTTCCTTGCATTCCTAAACATGCATGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTGTGTGTGTGGGAGTAGGAGGACTAGGGGAATGAGGGGAACGGGTGGGGGATGGGGAGAACTCTaGCAGGGGCAACCTGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HVCVCGSRRTRGMRGTGGGWGEL*QGQPGR Trigger: CCTTCCAGGTTGCCCCTGCCAGAGTTCTCCCCATCC...CCCACCCGTTCCCCTCATTCCCCTAGTCCTCCTACTCCCACACACACACACATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR TCA 90 bp | CATGTGTGTGTGTGTGGGAGTAGGAGGACTAGGGGAATGAGGGGAACGGGTGGGCTGTATCAAAGGTGGTaGAGCAAGGGAAGGGTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: HVCVCGSRRTRGMRGTGGLYQRW*SKGRVG Trigger: GCCAACCCTTCCCTTGCTTCACCACCTTTGATACAG...CCCACCCGTTCCCCTCATTCCCCTAGTCCTCCTACTCCCACACACACACACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR TCA 90 bp | CACATATGTAGCAGAGGACTGCATTGTCTGGCCTTAGTGGAAGAGTATGTACCTCTGTATCAAAGGTGGTaGAGCAAGGGAAGGGTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: HICSRGLHCLALVEEYVPLYQRW*SKGRVG Trigger: GCCAACCCTTCCCTTGCTTCACCACCTTTGATACAG...AGGTACATACTCTTCCACTAAGGCCAGACAATGCAGTCCTCTGCTACATATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR CAA 90 bp | ACTGCCATCTTCATGACATTGACCATACTTCCTTCTCTGATAACTTaGTGGACAGTAGTGCTGTCCTGTATCAAAGGTGGTGAAGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TAIFMTLTILPSLIT*WTVVLSCIKGGEAR Trigger: CCTTGCTTCACCACCTTTGATACAGGACAGCACTACTGTCCACAAAGTTATCAGAGAAGGAAGTATGGTCAATGTCATGAAGATGGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR TCA 90 bp | CACATATGTAGCAGAGGACTGCATTGTCTGGCCTTAGTGGAAGAGTATGTACCTGCAGATGAAAAGAACTaGATTAGCCTTAGACTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HICSRGLHCLALVEEYVPADEKN*ISLRLL Trigger: CAGAAGTCTAAGGCTAATTCAGTTCTTTTCATCTGC...AGGTACATACTCTTCCACTAAGGCCAGACAATGCAGTCCTCTGCTACATATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR TCA 90 bp | CACATATGTAGCAGAGGACTGCATTGTCTGGCCTTAGTGGAAGAGTATGTACCTATAGAAGGCATATGGTaGCATCTATATCACAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: HICSRGLHCLALVEEYVPIEGIW*HLYHRR Trigger: TCTTCTGTGATATAGATGTCACCATATGCCTTCTAT...AGGTACATACTCTTCCACTAAGGCCAGACAATGCAGTCCTCTGCTACATATGTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTGATCCATATTGGCAGCCATCTGACTTTTATAACTGCCATCTTCATGACCAGGAGAGCAACAGATaGCAGTGTAGTAGTGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: MLDPYWQPSDFYNCHLHDQESNR*QCSSAY Trigger: ATAAGCACTACTACACTGTCATCTGTTGCTCTCCTG...GTCATGAAGATGGCAGTTATAAAAGTCAGATGGCTGCCAATATGGATCAAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR CAA 90 bp | GCATGTTTAGGAATGCAAGGAAAGCTAACAGGGAACATTGAATGCTaGATCCATATTGGCAGCCATCTGACTTTTATAACTGCCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: ACLGMQGKLTGNIEC*IHIGSHLTFITAIF Trigger: GAAGATGGCAGTTATAAAAGTCAGATGGCTGCCAATATGGATCAAGCATTCAATGTTCCCTGTTAGCTTTCCTTGCATTCCTAAACATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR GCA 90 bp | CACATATGTAGCAGAGGACTGCATTGTCTGGCCTTAGTGGAAGAGTATGTACCTTCTGACTTTTATAACTaGCATCTTCATGACATTGAC | + |
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Preference number: 2 (lower is better) Translates to: HICSRGLHCLALVEEYVPSDFYN*HLHDID Trigger: GTCAATGTCATGAAGATGGCAGTTATAAAAGTCAGA...AGGTACATACTCTTCCACTAAGGCCAGACAATGCAGTCCTCTGCTACATATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGGAATGCAAGGAAAGCTAACAGGGAACATTGAATGCTTGATCCATATTGGCTCTCTGATAACTTTGTaGACAGTAGTGCTGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LGMQGKLTGNIECLIHIGSLITL*TVVLSC Trigger: ACAGGACAGCACTACTGTCCACAAAGTTATCAGAGA...GCCAATATGGATCAAGCATTCAATGTTCCCTGTTAGCTTTCCTTGCATTCCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR CCA 90 bp | GTACATGCATGTTTAGGAATGCAAGGAAAGCTAACAGGGAACATTGAATGCTTGTCTCTGATAACTTTGTaGACAGTAGTGCTGTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: VHACLGMQGKLTGNIECLSLITL*TVVLSC Trigger: ACAGGACAGCACTACTGTCCACAAAGTTATCAGAGA...CAAGCATTCAATGTTCCCTGTTAGCTTTCCTTGCATTCCTAAACATGCATGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR TCA 90 bp | GTACATGCATGTTTAGGAATGCAAGGAAAGCTAACAGGGAACATTGAATGCTTGGCAGATGAAAAGAACTaGATTAGCCTTAGACTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VHACLGMQGKLTGNIECLADEKN*ISLRLL Trigger: CAGAAGTCTAAGGCTAATTCAGTTCTTTTCATCTGC...CAAGCATTCAATGTTCCCTGTTAGCTTTCCTTGCATTCCTAAACATGCATGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTGATCCATATTGGCAGCCATCTGACTTTTATAACTGCCATCTTCATGACATAGAAGGCATATGGTaGCATCTATATCACAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: MLDPYWQPSDFYNCHLHDIEGIW*HLYHRR Trigger: TCTTCTGTGATATAGATGTCACCATATGCCTTCTAT...GTCATGAAGATGGCAGTTATAAAAGTCAGATGGCTGCCAATATGGATCAAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGAACGGGTGGGTGGGTGGAGTAACATCCTCTCAGAGGCAAAGGGGAGGGGGGAAGCAAGGGAAGGGTaGGCAGGAGAGCAACAGATG | + |
|
Preference number: 3 (lower is better) Translates to: GERVGGWSNILSEAKGRGEAREG*AGEQQM Trigger: CATCTGTTGCTCTCCTGCCAACCCTTCCCTTGCTTC...CCCCCTCCCCTTTGCCTCTGAGAGGATGTTACTCCACCCACCCACCCGTTCCCC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR TCA 72 bp | TTTGTGGACAGTAGTGCTGTCCTGTATCAAAGGTGGTaGAGCAAGGGAAGGGTTGGCAGGAGAGCAACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: FVDSSAVLYQRW*SKGRVGRRATD Trigger: ATCTGTTGCTCTCCTGCCAACCCTTCCCTTGCTTCACCACCTTTGATACAGGACAGCACTACTGTCCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR CCA 72 bp | ACTAAACCACCAACCAAGAGCATACATGGGCTGGTTTaGCACATATGTAGCAGAGGACTGCATTGTCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TKPPTKSIHGLV*HICSRGLHCLA Trigger: GGCCAGACAATGCAGTCCTCTGCTACATATGTGCCAAACCAGCCCATGTATGCTCTTGGTTGGTGGTTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR CCA 72 bp | CAGAGACTAAACCACCAACCAAGAGCATACATGGGCTaGTTTGGCACATATGTAGCAGAGGACTGCATTGTC | + |
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Preference number: 3 (lower is better) Translates to: QRLNHQPRAYMG*FGTYVAEDCIV Trigger: GACAATGCAGTCCTCTGCTACATATGTGCCAAACCAGCCCATGTATGCTCTTGGTTGGTGGTTTAGTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGGAATGCAAGGAAAGCTAACAGGGAACATTGAATGCTTGATCCATATTGGCGAAGCAAGGGAAGGGTaGGCAGGAGAGCAACAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LGMQGKLTGNIECLIHIGEAREG*AGEQQM Trigger: CATCTGTTGCTCTCCTGCCAACCCTTCCCTTGCTTC...GCCAATATGGATCAAGCATTCAATGTTCCCTGTTAGCTTTCCTTGCATTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR TCA 72 bp | GTGAAGCAAGGGAAGGGTTGGCAGGAGAGCAACAGATaGCAGTGTAGTAGTGCTTATGGGACTGATTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: VKQGKGWQESNR*QCSSAYGTDFN Trigger: ATTGAAATCAGTCCCATAAGCACTACTACACTGTCATCTGTTGCTCTCCTGCCAACCCTTCCCTTGCTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR TCA 72 bp | ATGTTTAGGAATGCAAGGAAAGCTAACAGGGAACATTaGATGCTTGATCCATATTGGCAGCCATCTGACTTT | + |
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Preference number: 3 (lower is better) Translates to: MFRNARKANREH*MLDPYWQPSDF Trigger: AAAGTCAGATGGCTGCCAATATGGATCAAGCATTCAATGTTCCCTGTTAGCTTTCCTTGCATTCCTAAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR GCA 72 bp | CTTGATCCATATTGGCAGCCATCTGACTTTTATAACTaGCATCTTCATGACATTGACCATACTTCCTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LDPYWQPSDFYN*HLHDIDHTSFS Trigger: AGAGAAGGAAGTATGGTCAATGTCATGAAGATGGCAGTTATAAAAGTCAGATGGCTGCCAATATGGATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR TCA 72 bp | CTTTCTCTTATTCTTAGAGTAGCAGATGAAAAGAACTaGATTAGCCTTAGACTTCTGGACTCTACCAGATGG | + |
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Preference number: 3 (lower is better) Translates to: LSLILRVADEKN*ISLRLLDSTRW Trigger: CCATCTGGTAGAGTCCAGAAGTCTAAGGCTAATTCAGTTCTTTTCATCTGCTACTCTAAGAATAAGAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| 3UTR GCA 72 bp | TTAGGAATGCAAGGAAAGCTAACAGGGAACATTGAATaGTTGATCCATATTGGCAGCCATCTGACTTTTATA | + |
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Preference number: 3 (lower is better) Translates to: LGMQGKLTGNIE*LIHIGSHLTFI Trigger: TATAAAAGTCAGATGGCTGCCAATATGGATCAAGCATTCAATGTTCCCTGTTAGCTTTCCTTGCATTCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| CDS-3UTR CCA 90 bp | GGGGAACGGGTGGGTGGGTGGAGTAACATCCTCTCAGAGGCAAAGGGGAGGGGGGCCCCACCAGCAAAGTaGAAGAAAAAGATCTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: GERVGGWSNILSEAKGRGAPPAK*KKKICV Trigger: AACACAGATCTTTTTCTTCCACTTTGCTGGTGGGGC...CCCCCTCCCCTTTGCCTCTGAGAGGATGTTACTCCACCCACCCACCCGTTCCCC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000214103.2 |
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| CDS-3UTR GCA 90 bp | CCCCCTGTACACAAGTCAGGTTGCGCAGATTGTCTAGACTCATCTCTTCATTTTGAGGAAGAAAATATCTaGCCCACCAGCAAAGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: PPVHKSGCADCLDSSLHFEEENI*PTSKVE Trigger: TTCCACTTTGCTGGTGGGGCAGATATTTTCTTCCTC...AAAATGAAGAGATGAGTCTAGACAATCTGCGCAACCTGACTTGTGTACAGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214103.2 |
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| CDS-3UTR TCA 90 bp | TTAGGAATGCAAGGAAAGCTAACAGGGAACATTGAATGCTTGATCCATATTGGCCATTGTTGGAGATCATaGGAAGTTCGAGGGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: LGMQGKLTGNIECLIHIGHCWRS*EVRGQR Trigger: CCTTTGCCCTCGAACTTCTCATGATCTCCAACAATG...GCCAATATGGATCAAGCATTCAATGTTCCCTGTTAGCTTTCCTTGCATTCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214103.2 |
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| CDS-3UTR CCA 90 bp | CCATCTGACTTTTATAACTGCCATCTTCATGACATTGACCATACTTCCTTCTCTCGTCCCTCCCCAGAATaGAATCTGAGCATAACCAGA | + |
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Preference number: 4 (lower is better) Translates to: PSDFYNCHLHDIDHTSFSRPSPE*NLSITR Trigger: TCTGGTTATGCTCAGATTCCATTCTGGGGAGGGACG...AGAGAAGGAAGTATGGTCAATGTCATGAAGATGGCAGTTATAAAAGTCAGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214103.2 |
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| 3UTR CAA 72 bp | TTCATGACATTGACCATACTTCCTTCTCTGATAACTTaGTGGACAGTAGTGCTGTCCTGTATCAAAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: FMTLTILPSLIT*WTVVLSCIKGG Trigger: ACCACCTTTGATACAGGACAGCACTACTGTCCACAAAGTTATCAGAGAAGGAAGTATGGTCAATGTCATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTGTACACAAGTCAGGTTGCGCAGATTGTCTAGACTCATCTCTTCATTTTAACCATTATAGGAGATaGCCTTCCTTTCTGATAAAA | + |
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Preference number: 4 (lower is better) Translates to: PPVHKSGCADCLDSSLHFNHYRR*PSFLIK Trigger: TTTTATCAGAAAGGAAGGCCATCTCCTATAATGGTT...AAAATGAAGAGATGAGTCTAGACAATCTGCGCAACCTGACTTGTGTACAGGGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214103.2 |
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| CDS-3UTR TCA 90 bp | GTACATGCATGTTTAGGAATGCAAGGAAAGCTAACAGGGAACATTGAATGCTTGGGGGACTGTGATAGATaGAAAGACAATATCCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: VHACLGMQGKLTGNIECLGDCDR*KDNIQN Trigger: ATTCTGGATATTGTCTTTTCATCTATCACAGTCCCC...CAAGCATTCAATGTTCCCTGTTAGCTTTCCTTGCATTCCTAAACATGCATGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214103.2 |
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| CDS-3UTR CCA 90 bp | ATGCTTGATCCATATTGGCAGCCATCTGACTTTTATAACTGCCATCTTCATGACAGACAATATCCAGAATaGATTTGTTCCTCAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: MLDPYWQPSDFYNCHLHDRQYPE*ICSSRG Trigger: TCCTCTTGAGGAACAAATCCATTCTGGATATTGTCT...GTCATGAAGATGGCAGTTATAAAAGTCAGATGGCTGCCAATATGGATCAAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214103.2 |
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| CDS-3UTR CAA 90 bp | CATGTGTGTGTGTGTGGGAGTAGGAGGACTAGGGGAATGAGGGGAACGGGTGGGTGTTTCCCAGCACAGTaGTTACATACACAAGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: HVCVCGSRRTRGMRGTGGCFPAQ*LHTQER Trigger: TCTTTCTTGTGTATGTAACAACTGTGCTGGGAAACA...CCCACCCGTTCCCCTCATTCCCCTAGTCCTCCTACTCCCACACACACACACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214103.2 |
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| CDS-3UTR CAA 90 bp | AAGGGAAGGGTTGGCAGGAGAGCAACAGATGACAGTGTAGTAGTGCTTATGGGAGTTACCAGGCCATTGTaGGAGATCATGAGAAGTTCG | + |
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Preference number: 5 (lower is better) Translates to: KGRVGRRATDDSVVVLMGVTRPL*EIMRSS Trigger: CGAACTTCTCATGATCTCCAACAATGGCCTGGTAAC...TCCCATAAGCACTACTACACTGTCATCTGTTGCTCTCCTGCCAACCCTTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214103.2 |
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| CDS-3UTR CAA 90 bp | AAGGGAAGGGTTGGCAGGAGAGCAACAGATGACAGTGTAGTAGTGCTTATGGGAACGAATTCTTTCACATaGGTGTGGTTTATCTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: KGRVGRRATDDSVVVLMGTNSFT*VWFIWL Trigger: GAGCCAGATAAACCACACCAATGTGAAAGAATTCGT...TCCCATAAGCACTACTACACTGTCATCTGTTGCTCTCCTGCCAACCCTTCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| CDS-3UTR CAA 90 bp | CCCCCTGTACACAAGTCAGGTTGCGCAGATTGTCTAGACTCATCTCTTCATTTTATATCCAGAATGGATTaGTTCCTCAAGAGGAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: PPVHKSGCADCLDSSLHFISRMD*FLKRKY Trigger: GTACTTCCTCTTGAGGAACAAATCCATTCTGGATAT...AAAATGAAGAGATGAGTCTAGACAATCTGCGCAACCTGACTTGTGTACAGGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214103.2 |
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| CDS-3UTR CAA 90 bp | GTACATGCATGTTTAGGAATGCAAGGAAAGCTAACAGGGAACATTGAATGCTTGAGATCCACCAGGAACTaGGGGACTGTGATAGATGAA | + |
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Preference number: 5 (lower is better) Translates to: VHACLGMQGKLTGNIECLRSTRN*GTVIDE Trigger: TTCATCTATCACAGTCCCCAAGTTCCTGGTGGATCT...CAAGCATTCAATGTTCCCTGTTAGCTTTCCTTGCATTCCTAAACATGCATGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214103.2 |
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| CDS-3UTR CAA 90 bp | GACTTTTATAACTGCCATCTTCATGACATTGACCATACTTCCTTCTCTGATAACACGAATTCTTTCACATaGGTGTGGTTTATCTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: DFYNCHLHDIDHTSFSDNTNSFT*VWFIWL Trigger: GAGCCAGATAAACCACACCAATGTGAAAGAATTCGT...GTTATCAGAGAAGGAAGTATGGTCAATGTCATGAAGATGGCAGTTATAAAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| CDS-3UTR CAA 90 bp | TTAGGAATGCAAGGAAAGCTAACAGGGAACATTGAATGCTTGATCCATATTGGCGAATTATCTGAACAATaGAATGTAAACCACCACCCA | + |
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Preference number: 5 (lower is better) Translates to: LGMQGKLTGNIECLIHIGELSEQ*NVNHHP Trigger: TGGGTGGTGGTTTACATTCAATTGTTCAGATAATTC...GCCAATATGGATCAAGCATTCAATGTTCCCTGTTAGCTTTCCTTGCATTCCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214103.2 |
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| CDS CAA 72 bp | AAGAGCAGGAAGAACCACAACAGGGTTACCAGGCCATaGTTGGAGATCATGAGAAGTTCGAGGGCAAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: KSRKNHNRVTRP*LEIMRSSRAKV Trigger: TACCTTTGCCCTCGAACTTCTCATGATCTCCAACAATGGCCTGGTAACCCTGTTGTGGTTCTTCCTGCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087824.2 ENSMUST00000214103.2 |
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| CDS GCA 72 bp | GAACAAAAAGAACTCCAGTTCCCGGATGCGAGTAAGTaGCAGGAAGACGAATTCTTTCACATTGGTGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: EQKELQFPDASK*QEDEFFHIGVV Trigger: AACCACACCAATGTGAAAGAATTCGTCTTCCTGGCACTTACTCGCATCCGGGAACTGGAGTTCTTTTTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087824.2 ENSMUST00000208391.3 ENSMUST00000214103.2 |
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| CDS CCA 72 bp | AGAAAAAGATCTGTGTTAAACAACCATTATAGGAGATaGCCTTCCTTTCTGATAAAAGATCCACCAGGAACT | + |
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Preference number: 6 (lower is better) Translates to: RKRSVLNNHYRR*PSFLIKDPPGT Trigger: AGTTCCTGGTGGATCTTTTATCAGAAAGGAAGGCCATCTCCTATAATGGTTGTTTAACACAGATCTTTTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087824.2 ENSMUST00000214103.2 |
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