Pregenerated sensors for OLFR1420 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060878Ensembl transcript IDs: ENSMUST00000072784.4, ENSMUST00000217281.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGAGAGAATTGAACCTGGATCCTCTGGAAGAGCAGCCAGTTCTCTaGACTGTGGAGCCATCTCTCCATCCCCCATCCCACCATTATTTT | + |
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Preference number: 1 (lower is better) Translates to: VRELNLDPLEEQPVL*TVEPSLHPPSHHYF Trigger: AAAATAATGGTGGGATGGGGGATGGAGAGATGGCTCCACAGTTCAGAGAACTGGCTGCTCTTCCAGAGGATCCAGGTTCAATTCTCTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR GCA 90 bp | CTTATAGAACCTAATCTGACTTCCAACTTGCAGTCTTTCTGCTTCTaGCTCCTGAGTACAGCATTACAGGATTGCACCAGTAGGCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: LIEPNLTSNLQSFCF*LLSTALQDCTSRLG Trigger: TCCAAGCCTACTGGTGCAATCCTGTAATGCTGTACTCAGGAGGCAGAAGCAGAAAGACTGCAAGTTGGAAGTCAGATTAGGTTCTATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR GCA 90 bp | GATTTCCTTATAGAACCTAATCTGACTTCCAACTTGCAGTCTTTCTaGTTCTGCCTCCTGAGTACAGCATTACAGGATTGCACCAGTAGG | + |
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Preference number: 1 (lower is better) Translates to: DFLIEPNLTSNLQSF*FCLLSTALQDCTSR Trigger: CCTACTGGTGCAATCCTGTAATGCTGTACTCAGGAGGCAGAAGCAGAAAGACTGCAAGTTGGAAGTCAGATTAGGTTCTATAAGGAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR GCA 90 bp | TTGCAGTCTTTCTGCTTCTGCCTCCTGAGTACAGCATTACAGGATTaGACCAGTAGGCTTGGAACCTTCATAAATAGAATTAGCATTCCA | + |
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Preference number: 1 (lower is better) Translates to: LQSFCFCLLSTALQD*TSRLGTFINRISIP Trigger: TGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCTACTGGTGCAATCCTGTAATGCTGTACTCAGGAGGCAGAAGCAGAAAGACTGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR GCA 90 bp | TGTACAATAAAGAAACTAAAGCTCACAGAGATGGGGAGACTTGTCTaGAGTTATGTATGTGTCCTATTGGCAAAGAAAGCCCAGAATCAC | + |
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Preference number: 1 (lower is better) Translates to: CTIKKLKLTEMGRLV*SYVCVLLAKKAQNH Trigger: GTGATTCTGGGCTTTCTTTGCCAATAGGACACATACATAACTGCAGACAAGTCTCCCCATCTCTGTGAGCTTTAGTTTCTTTATTGTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR CCA 90 bp | TCTCTCCATCCCCCATCCCACCATTATTTTATTCTTATCATTAGTTaGTTTGTCTTGAGACCGGATTTCCTTATAGAACCTAATCTGACT | + |
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Preference number: 1 (lower is better) Translates to: SLHPPSHHYFILIIS*FVLRPDFLIEPNLT Trigger: AGTCAGATTAGGTTCTATAAGGAAATCCGGTCTCAAGACAAACCAACTAATGATAAGAATAAAATAATGGTGGGATGGGGGATGGAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTGAACTGTGGAGCCATCTCTCCATCCCCCATCCCACCATTATTTTATTCCAGTCTTTCTGCTTCTaGCTCCTGAGTACAGCATTA | + |
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Preference number: 2 (lower is better) Translates to: FSELWSHLSIPHPTIILFQSFCF*LLSTAL Trigger: TAATGCTGTACTCAGGAGGCAGAAGCAGAAAGACTG...GAATAAAATAATGGTGGGATGGGGGATGGAGAGATGGCTCCACAGTTCAGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR CAA 90 bp | GTCTTGAGACCGGATTTCCTTATAGAACCTAATCTGACTTCCAACTaGCAGTCTTTCTGCTTCTGCCTCCTGAGTACAGCATTACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: VLRPDFLIEPNLTSN*QSFCFCLLSTALQD Trigger: ATCCTGTAATGCTGTACTCAGGAGGCAGAAGCAGAAAGACTGCAAGTTGGAAGTCAGATTAGGTTCTATAAGGAAATCCGGTCTCAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCAAGATGCTCTCAAAAGTACAAGACGCAGTGGTACTCTCTGTCATCATGCTTACACCTTTTCCCTaGACTTCCCTGAATTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SSKMLSKVQDAVVLSVIMLTPFP*TSLNFL Trigger: GAGAAAATTCAGGGAAGTTCAGGGAAAAGGTGTAAG...CATGATGACAGAGAGTACCACTGCGTCTTGTACTTTTGAGAGCATCTTGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR-3UTR GCA 90 bp | GTTATGTATGTGTCCTATTGGCAAAGAAAGCCCAGAATCACAAGACCATCATATACAGCATTACAGGATTaGACCAGTAGGCTTGGAACC | + |
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Preference number: 2 (lower is better) Translates to: VMYVSYWQRKPRITRPSYTALQD*TSRLGT Trigger: GGTTCCAAGCCTACTGGTGCAATCCTGTAATGCTGT...ATATGATGGTCTTGTGATTCTGGGCTTTCTTTGCCAATAGGACACATACATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR CAA 90 bp | CCCCCATCCCACCATTATTTTATTCTTATCATTAGTTGGTTTGTCTaGAGACCGGATTTCCTTATAGAACCTAATCTGACTTCCAACTTG | + |
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Preference number: 2 (lower is better) Translates to: PPSHHYFILIISWFV*RPDFLIEPNLTSNL Trigger: CAAGTTGGAAGTCAGATTAGGTTCTATAAGGAAATCCGGTCTCAAGACAAACCAACTAATGATAAGAATAAAATAATGGTGGGATGGGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTTGTCTGCAGTTATGTATGTGTCCTATTGGCAAAGAAAGCCCAGAATCACTTCTCATTGGGTATATaGATTAACCATACAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: RLVCSYVCVLLAKKAQNHFSLGI*INHTKC Trigger: GCACTTTGTATGGTTAATCCATATACCCAATGAGAA...GTGATTCTGGGCTTTCTTTGCCAATAGGACACATACATAACTGCAGACAAGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR TCA 72 bp | TTGAACCTGGATCCTCTGGAAGAGCAGCCAGTTCTCTaGACTGTGGAGCCATCTCTCCATCCCCCATCCCAC | + |
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Preference number: 3 (lower is better) Translates to: LNLDPLEEQPVL*TVEPSLHPPSH Trigger: GTGGGATGGGGGATGGAGAGATGGCTCCACAGTTCAGAGAACTGGCTGCTCTTCCAGAGGATCCAGGTTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR-3UTR CAA 90 bp | GAACCTGGATCCTCTGGAAGAGCAGCCAGTTCTCTGAACTGTGGAGCCATCTCTAATCTGACTTCCAACTaGCAGTCTTTCTGCTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: EPGSSGRAASSLNCGAISNLTSN*QSFCFC Trigger: GCAGAAGCAGAAAGACTGCAAGTTGGAAGTCAGATT...AGAGATGGCTCCACAGTTCAGAGAACTGGCTGCTCTTCCAGAGGATCCAGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR GCA 72 bp | CCTAATCTGACTTCCAACTTGCAGTCTTTCTGCTTCTaGCTCCTGAGTACAGCATTACAGGATTGCACCAGT | + |
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Preference number: 3 (lower is better) Translates to: PNLTSNLQSFCF*LLSTALQDCTS Trigger: ACTGGTGCAATCCTGTAATGCTGTACTCAGGAGGCAGAAGCAGAAAGACTGCAAGTTGGAAGTCAGATTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR GCA 72 bp | ATAGAACCTAATCTGACTTCCAACTTGCAGTCTTTCTaGTTCTGCCTCCTGAGTACAGCATTACAGGATTGC | + |
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Preference number: 3 (lower is better) Translates to: IEPNLTSNLQSF*FCLLSTALQDC Trigger: GCAATCCTGTAATGCTGTACTCAGGAGGCAGAAGCAGAAAGACTGCAAGTTGGAAGTCAGATTAGGTTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGCAGTTATGTATGTGTCCTATTGGCAAAGAAAGCCCAGAATCACAAGACCAATGTTGGTGAGAGAATaGAACCTGGATCCTCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: SAVMYVSYWQRKPRITRPMLVRE*NLDPLE Trigger: TTCCAGAGGATCCAGGTTCAATTCTCTCACCAACAT...TGGTCTTGTGATTCTGGGCTTTCTTTGCCAATAGGACACATACATAACTGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR TCA 72 bp | AGAACCTCTGGAACTGGAGTTATAGAAATTGTGAGCTaGCATGTTGGTGAGAGAATTGAACCTGGATCCTCT | + |
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Preference number: 3 (lower is better) Translates to: RTSGTGVIEIVS*HVGERIEPGSS Trigger: AGAGGATCCAGGTTCAATTCTCTCACCAACATGTCAGCTCACAATTTCTATAACTCCAGTTCCAGAGGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR GCA 72 bp | TTCTGCTTCTGCCTCCTGAGTACAGCATTACAGGATTaGACCAGTAGGCTTGGAACCTTCATAAATAGAATT | + |
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Preference number: 3 (lower is better) Translates to: FCFCLLSTALQD*TSRLGTFINRI Trigger: AATTCTATTTATGAAGGTTCCAAGCCTACTGGTGCAATCCTGTAATGCTGTACTCAGGAGGCAGAAGCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR GCA 72 bp | AAGAAACTAAAGCTCACAGAGATGGGGAGACTTGTCTaGAGTTATGTATGTGTCCTATTGGCAAAGAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: KKLKLTEMGRLV*SYVCVLLAKKA Trigger: GGCTTTCTTTGCCAATAGGACACATACATAACTGCAGACAAGTCTCCCCATCTCTGTGAGCTTTAGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR-3UTR CAA 90 bp | AGACTTGTCTGCAGTTATGTATGTGTCCTATTGGCAAAGAAAGCCCAGAATCACATGTGCATTGGTGTTTaGTCTGCATGTATGTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: RLVCSYVCVLLAKKAQNHMCIGV*SACMSV Trigger: CACAGACATACATGCAGACAAAACACCAATGCACAT...GTGATTCTGGGCTTTCTTTGCCAATAGGACACATACATAACTGCAGACAAGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGCAGTTATGTATGTGTCCTATTGGCAAAGAAAGCCCAGAATCACAAGACCACCAACTAGTATGGCTTaGTCTCTCTCTATTCATGCT | + |
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Preference number: 3 (lower is better) Translates to: SAVMYVSYWQRKPRITRPPTSMA*SLSIHA Trigger: AGCATGAATAGAGAGAGACAAAGCCATACTAGTTGG...TGGTCTTGTGATTCTGGGCTTTCTTTGCCAATAGGACACATACATAACTGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR CCA 72 bp | CTAGCTCCAAGATGCTCTCAAAAGTACAAGACGCAGTaGTACTCTCTGTCATCATGTCCATTCTTTTCATTT | + |
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Preference number: 3 (lower is better) Translates to: LAPRCSQKYKTQ*YSLSSCPFFSF Trigger: AAATGAAAAGAATGGACATGATGACAGAGAGTACCACTGCGTCTTGTACTTTTGAGAGCATCTTGGAGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| 3UTR TCA 72 bp | TGGATTAACCATACAAAGTGCCTGGTATATAATAGCTaGCCAACTAGTATGGCTTTGTCTCTCTCTATTCAT | + |
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Preference number: 3 (lower is better) Translates to: WINHTKCLVYNS*PTSMALSLSIH Trigger: ATGAATAGAGAGAGACAAAGCCATACTAGTTGGTCAGCTATTATATACCAGGCACTTTGTATGGTTAATCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| CDS-3UTR TCA 90 bp | GAACCTGGATCCTCTGGAAGAGCAGCCAGTTCTCTGAACTGTGGAGCCATCTCTACCGGTCGTAAGCCATaGCTGCAAGCAGGACACAGT | + |
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Preference number: 4 (lower is better) Translates to: EPGSSGRAASSLNCGAISTGRKP*LQAGHS Trigger: ACTGTGTCCTGCTTGCAGTCATGGCTTACGACCGGT...AGAGATGGCTCCACAGTTCAGAGAACTGGCTGCTCTTCCAGAGGATCCAGGTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| CDS-3UTR TCA 90 bp | GAACCTGGATCCTCTGGAAGAGCAGCCAGTTCTCTGAACTGTGGAGCCATCTCTCACAAGCCAGGCGTATaGCTGCAGGCATGTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: EPGSSGRAASSLNCGAISHKPGV*LQACHS Trigger: ACTGTGACATGCCTGCAGTCATACGCCTGGCTTGTG...AGAGATGGCTCCACAGTTCAGAGAACTGGCTGCTCTTCCAGAGGATCCAGGTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| CDS-3UTR TCA 90 bp | TCCAACTTGCAGTCTTTCTGCTTCTGCCTCCTGAGTACAGCATTACAGGATTGCCACCCCAGGGTCAGGTaGGAATGGACGAAAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SNLQSFCFCLLSTALQDCHPRVR*EWTKEE Trigger: TTCTTCTTTCGTCCATTCTCACCTGACCCTGGGGTG...GCAATCCTGTAATGCTGTACTCAGGAGGCAGAAGCAGAAAGACTGCAAGTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| CDS-3UTR GCA 90 bp | TTCTCTGAACTGTGGAGCCATCTCTCCATCCCCCATCCCACCATTATTTTATTCACAAAAATCACCATCTaGACCCCAGGGTCAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: FSELWSHLSIPHPTIILFTKITI*TPGSGE Trigger: CTCACCTGACCCTGGGGTGCAGATGGTGATTTTTGT...GAATAAAATAATGGTGGGATGGGGGATGGAGAGATGGCTCCACAGTTCAGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| CDS-3UTR TCA 90 bp | TCTGCAGTTATGTATGTGTCCTATTGGCAAAGAAAGCCCAGAATCACAAGACCAGGGTACCACAACCAGTaGTGGAAACAGGAGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SAVMYVSYWQRKPRITRPGYHNQ*WKQEFS Trigger: GGAAAACTCCTGTTTCCATCACTGGTTGTGGTACCC...TGGTCTTGTGATTCTGGGCTTTCTTTGCCAATAGGACACATACATAACTGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| CDS-3UTR GCA 90 bp | GTTATGTATGTGTCCTATTGGCAAAGAAAGCCCAGAATCACAAGACCATCATATCCACAGACACCATTCTaGCCATCTCAGGAGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: VMYVSYWQRKPRITRPSYPQTPF*PSQESS Trigger: GCTACTCTCCTGAGATGGGCAGAATGGTGTCTGTGG...ATATGATGGTCTTGTGATTCTGGGCTTTCTTTGCCAATAGGACACATACATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| CDS-3UTR TCA 90 bp | ACCAGTAGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGACCGGTCGTAAGCCATaGCTGCAAGCAGGACACAGT | + |
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Preference number: 4 (lower is better) Translates to: TSRLGTFINRISIPFQFQTGRKP*LQAGHS Trigger: ACTGTGTCCTGCTTGCAGTCATGGCTTACGACCGGT...CTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCTACTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR TCA 90 bp | AGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGAAGTGCCACAAGCCAGGCGTATaGCTGCAGGCATGTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: RLGTFINRISIPFQFQKCHKPGV*LQACHS Trigger: ACTGTGACATGCCTGCAGTCATACGCCTGGCTTGTG...GCACTTCTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR GCA 90 bp | GACTTGTCTGCAGTTATGTATGTGTCCTATTGGCAAAGAAAGCCCAGAATCACACATAGAAAGAAGGTTTaGCAAGGCCAGTGGTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: DLSAVMYVSYWQRKPRITHRKKV*QGQWCN Trigger: ATTGCACCACTGGCCTTGGCAAACCTTCTTTCTATG...TGTGATTCTGGGCTTTCTTTGCCAATAGGACACATACATAACTGCAGACAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| CDS-3UTR CCA 90 bp | AGCTCCAAGATGCTCTCAAAAGTACAAGACGCAGTGGTACTCTCTGTCATCATGAGGCCAGTGGTGCAATaGATGATGTATAGAAGATTT | + |
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Preference number: 4 (lower is better) Translates to: SSKMLSKVQDAVVLSVIMRPVVQ*MMYRRF Trigger: AAATCTTCTATACATCATCCATTGCACCACTGGCCT...CATGATGACAGAGAGTACCACTGCGTCTTGTACTTTTGAGAGCATCTTGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| CDS-3UTR TCA 90 bp | ACCAGTAGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGCACCCCAGGGTCAGGTaGGAATGGACGAAAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TSRLGTFINRISIPFQFQHPRVR*EWTKEE Trigger: TTCTTCTTTCGTCCATTCTCACCTGACCCTGGGGTG...CTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCTACTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR GCA 90 bp | AGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGAAGTGCCCACAGACACCATTCTaGCCATCTCAGGAGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: RLGTFINRISIPFQFQKCPQTPF*PSQESS Trigger: GCTACTCTCCTGAGATGGGCAGAATGGTGTCTGTGG...GCACTTCTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR TCA 90 bp | ACCAGTAGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGGGGTACCACAACCAGTaGTGGAAACAGGAGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: TSRLGTFINRISIPFQFQGYHNQ*WKQEFS Trigger: GGAAAACTCCTGTTTCCATCACTGGTTGTGGTACCC...CTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCTACTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR GCA 90 bp | AGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGAAGTGCACAAAAATCACCATCTaGACCCCAGGGTCAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RLGTFINRISIPFQFQKCTKITI*TPGSGE Trigger: CTCACCTGACCCTGGGGTGCAGATGGTGATTTTTGT...GCACTTCTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR GCA 90 bp | AGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGAAGTGCAGCCAGGCGTATGACTaGAGGCATGTCACAGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: RLGTFINRISIPFQFQKCSQAYD*RHVTVE Trigger: TTCTACTGTGACATGCCTGCAGTCATACGCCTGGCT...GCACTTCTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR GCA 90 bp | AGACTTGTCTGCAGTTATGTATGTGTCCTATTGGCAAAGAAAGCCCAGAATCACCTAGAACTTTCTCAATaGCTTCCTCAGAGCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: RLVCSYVCVLLAKKAQNHLELSQ*LPQSIF Trigger: AAAGATGCTCTGAGGAAGGCATTGAGAAAGTTCTAG...GTGATTCTGGGCTTTCTTTGCCAATAGGACACATACATAACTGCAGACAAGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| CDS-3UTR TCA 90 bp | ACCAGTAGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGCATGGGGGTGTGGAGTaGGTGGTTAATATGGACAAT | + |
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Preference number: 4 (lower is better) Translates to: TSRLGTFINRISIPFQFQHGGVE*VVNMDN Trigger: ATTGTCCATATTAACCACTCACTCCACACCCCCATG...CTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCTACTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR TCA 90 bp | GTTATGTATGTGTCCTATTGGCAAAGAAAGCCCAGAATCACAAGACCATCATATCAGTGGTGCAATGGATaGTGTATAGAAGATTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VMYVSYWQRKPRITRPSYQWCNG*CIEDFQ Trigger: CTGGAAATCTTCTATACATCATCCATTGCACCACTG...ATATGATGGTCTTGTGATTCTGGGCTTTCTTTGCCAATAGGACACATACATAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| CDS-3UTR CCA 90 bp | TTTCCATCCAGAACCTGCTTGTACAATAAAGAAACTAAAGCTCACAGAGATGGGACAAAGAAAAACATCTaGGTACCACAACCAGTGATG | + |
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Preference number: 4 (lower is better) Translates to: FPSRTCLYNKETKAHRDGTKKNI*VPQPVM Trigger: CATCACTGGTTGTGGTACCCAGATGTTTTTCTTTGT...CCCATCTCTGTGAGCTTTAGTTTCTTTATTGTACAAGCAGGTTCTGGATGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217281.2 |
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| CDS-3UTR GCA 90 bp | ACCAGTAGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGCATAGAAAGAAGGTTTaGCAAGGCCAGTGGTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: TSRLGTFINRISIPFQFQHRKKV*QGQWCN Trigger: ATTGCACCACTGGCCTTGGCAAACCTTCTTTCTATG...CTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCTACTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR TCA 90 bp | ACCAGTAGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGCAGTGGTGCAATGGATaGTGTATAGAAGATTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TSRLGTFINRISIPFQFQQWCNG*CIEDFQ Trigger: CTGGAAATCTTCTATACATCATCCATTGCACCACTG...CTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCTACTGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR CCA 90 bp | ACCAGTAGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGTCTCAGGAGAGTAGCTaGAACTGGGGGATAAATATA | + |
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Preference number: 4 (lower is better) Translates to: TSRLGTFINRISIPFQFQSQESS*NWGINI Trigger: TATATTTATCCCCCAGTTCCAGCTACTCTCCTGAGA...CTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCTACTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR GCA 90 bp | ACCAGTAGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGCTAGAACTTTCTCAATaGCTTCCTCAGAGCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: TSRLGTFINRISIPFQFQLELSQ*LPQSIF Trigger: AAAGATGCTCTGAGGAAGGCATTGAGAAAGTTCTAG...CTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCTACTGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR CCA 90 bp | AGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGAAGTGCAGGCCAGTGGTGCAATaGATGATGTATAGAAGATTT | + |
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Preference number: 4 (lower is better) Translates to: RLGTFINRISIPFQFQKCRPVVQ*MMYRRF Trigger: AAATCTTCTATACATCATCCATTGCACCACTGGCCT...GCACTTCTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS-3UTR CCA 90 bp | ACCAGTAGGCTTGGAACCTTCATAAATAGAATTAGCATTCCATTTCAATTTCAGACAAAGAAAAACATCTaGGTACCACAACCAGTGATG | + |
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Preference number: 4 (lower is better) Translates to: TSRLGTFINRISIPFQFQTKKNI*VPQPVM Trigger: CATCACTGGTTGTGGTACCCAGATGTTTTTCTTTGT...CTGAAATTGAAATGGAATGCTAATTCTATTTATGAAGGTTCCAAGCCTACTGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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| CDS TCA 90 bp | GGGATGCTTAGGACAATGAAGCTGATGATATACAGGGCAGTCCTATaGACATGCGTGTCTCCACAAGCCAGGCGTATGACTGCAGGCATG | + |
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Preference number: 5 (lower is better) Translates to: GMLRTMKLMIYRAVL*TCVSPQARRMTAGM Trigger: CATGCCTGCAGTCATACGCCTGGCTTGTGGAGACACGCATGTTCATAGGACTGCCCTGTATATCATCAGCTTCATTGTCCTAAGCATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072784.4 ENSMUST00000217281.2 |
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