Pregenerated sensors for OLFR1419 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067545Ensembl transcript IDs: ENSMUST00000087857.3, ENSMUST00000213954.2, ENSMUST00000217617.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGACAGTTTCAGGAGATCTaGCAGCCTCTTCTGACCTCC | + |
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Preference number: 2 (lower is better) Translates to: TSRGGGNRGPWKWAAGQGQFQEI*QPLLTS Trigger: GGAGGTCAGAAGAGGCTGTCAGATCTCCTGAAACTG...TCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR GCA 90 bp | ACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGAAGGCTCACAACCATCTaGAACTCCAGTTTCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TSRGGGNRGPWKWAAGQGRLTTI*NSSFRR Trigger: TCTCCTGAAACTGGAGTTGCAGATGGTTGTGAGCCT...TCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR GCA 90 bp | GCGGGAACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGAAGCCCCATCTGTGAGGCTCACAACCATCTaGAACTCCAGTTTCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: AGTGDPGSGLRAKEAPSVRLTTI*NSSFRR Trigger: TCTCCTGAAACTGGAGTTGCAGATGGTTGTGAGCCT...CACAGATGGGGCTTCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGTTCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGAGATCTGACAGCCTCTTCTGACCTCCTTGAGCACCAGGCATACACATGGATTGTGTTAAGGAAGTaGGGTTTCAGGAGACATTTA | + |
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Preference number: 2 (lower is better) Translates to: SGDLTASSDLLEHQAYTWIVLRK*GFRRHL Trigger: TAAATGTCTCCTGAAACCTCACTTCCTTAACACAAT...CCATGTGTATGCCTGGTGCTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR CAA 90 bp | GATCTCATTACTGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACTTTTAGAAGAGCAGTCAGTGCTCTTAACTGCT | + |
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Preference number: 2 (lower is better) Translates to: DLITDSCEPPCGCWD*NSGLLEEQSVLLTA Trigger: AGCAGTTAAGAGCACTGACTGCTCTTCTAAAAGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACTATCAGTAATGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCAGATCTCATTACTGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAATAGAAGTAGAGGGTaGCAATTAACACTTCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: ASDLITDSCEPPCGCWDLNRSRG*QLTLPR Trigger: TCTAGGAAGTGTTAATTGTCACCCTCTACTTCTATT...CAAATCCCAGCAACCACATGGTGGCTCACAACTATCAGTAATGAGATCTGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR TCA 90 bp | CAACTTTGTTTGTTGGACCCTAAAACTGAGCCCTTACTATATCCTTTGCAATGTCCAGGACTCAGTCACTaGAAATCTAATAGAAGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: QLCLLDPKTEPLLYPLQCPGLSH*KSNRSR Trigger: TCTACTTCTATTAGATTTTCAGTGACTGAGTCCTGG...ACATTGCAAAGGATATAGTAAGGGCTCAGTTTTAGGGTCCAACAAACAAAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR TCA 90 bp | CAACTTTGTTTGTTGGACCCTAAAACTGAGCCCTTACTATATCCTTTGCAATGTATTGTGTTAAGGAAGTaGGGTTTCAGGAGACATTTA | + |
|
Preference number: 2 (lower is better) Translates to: QLCLLDPKTEPLLYPLQCIVLRK*GFRRHL Trigger: TAAATGTCTCCTGAAACCTCACTTCCTTAACACAAT...ACATTGCAAAGGATATAGTAAGGGCTCAGTTTTAGGGTCCAACAAACAAAGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR CCA 72 bp | ACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTaGGCTGCGGGCCAAGGAAGCCCCATCTGTGCTCGG | + |
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Preference number: 3 (lower is better) Translates to: TSRGGGNRGPWK*AAGQGSPICAR Trigger: CCGAGCACAGATGGGGCTTCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR CAA 90 bp | GCGGGCCTCACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTGGGCTGCGCCTCTTCTGACCTCCTaGAGCACCAGGCATACACAT | + |
|
Preference number: 3 (lower is better) Translates to: AGLTSRGGGNRGPWKWAAPLLTS*STRHTH Trigger: ATGTGTATGCCTGGTGCTCAAGGAGGTCAGAAGAGG...CGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGTGAGGCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR CAA 90 bp | ACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGAGGGCACATGTTGCTCTaGAAGAGGACCCAGCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TSRGGGNRGPWKWAAGQGGHMLL*KRTQLP Trigger: TGGGAGCTGGGTCCTCTTCAAGAGCAACATGTGCCC...TCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR CAA 90 bp | ACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGAACTCAACTTTGTTTGTaGGACCCTAAAACTGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: TSRGGGNRGPWKWAAGQGTQLCL*DPKTEP Trigger: GGGCTCAGTTTTAGGGTCCAACAAACAAAGTTGAGT...TCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR CAA 90 bp | GCGGGCCTCACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTGGGCTGCGAGAACTCAACTTTGTTaGTTGGACCCTAAAACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: AGLTSRGGGNRGPWKWAARTQLC*LDPKTE Trigger: CTCAGTTTTAGGGTCCAACAAACAAAGTTGAGTTCT...CGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGTGAGGCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR CAA 90 bp | ACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGAAGCCCCATCTGTGCTCGGCTGTGGTTGCTGGGATTaGAACTCAGGACTTTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TGDPGSGLRAKEAPSVLGCGCWD*NSGLLE Trigger: TTCTAAAAGTCCTGAGTTCAAATCCCAGCAACCACA...GCCGAGCACAGATGGGGCTTCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR TCA 72 bp | AGAGAAGACTCAGCAGCTAAGGGCACATGTTGCTCTTaGAGAGGACCCAGCTCCCACTCCCAGCACTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: REDSAAKGTCCS*RGPSSHSQHSH Trigger: ATGTGAGTGCTGGGAGTGGGAGCTGGGTCCTCTTCAAGAGCAACATGTGCCCTTAGCTGCTGAGTCTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR GCA 72 bp | CCACTCCCAGCACTCACATGGAGGCTCACAACCATCTaGAACTCCAGTTTCAGGAGATCTGACAGCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PLPALTWRLTTI*NSSFRRSDSLF Trigger: GAAGAGGCTGTCAGATCTCCTGAAACTGGAGTTGCAGATGGTTGTGAGCCTCCATGTGAGTGCTGGGAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR TCA 72 bp | GCTCACAACCATCTGCAACTCCAGTTTCAGGAGATCTaGCAGCCTCTTCTGACCTCCTTGAGCACCAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: AHNHLQLQFQEI*QPLLTSLSTRH Trigger: ATGCCTGGTGCTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGAAACTGGAGTTGCAGATGGTTGTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGAGATCTGACAGCCTCTTCTGACCTCCTTGAGCACCAGGCATACACATGGACTCAACTTTGTTTGTaGGACCCTAAAACTGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SGDLTASSDLLEHQAYTWTQLCL*DPKTEP Trigger: GGGCTCAGTTTTAGGGTCCAACAAACAAAGTTGAGT...CCATGTGTATGCCTGGTGCTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR-3UTR CAA 90 bp | CCATCTGCAACTCCAGTTTCAGGAGATCTGACAGCCTCTTCTGACCTCCTTGAGTGTGGTTGCTGGGATTaGAACTCAGGACTTTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSATPVSGDLTASSDLLECGCWD*NSGLLE Trigger: TTCTAAAAGTCCTGAGTTCAAATCCCAGCAACCACA...CTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGAAACTGGAGTTGCAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR TCA 72 bp | AGGACTTTTAGAAGAGCAGTCAGTGCTCTTAACTGCTaGGCGGTCTCTTCAGCCCTGCTGTCAACAATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: RTFRRAVSALNC*AVSSALLSTIL Trigger: TAAGATTGTTGACAGCAGGGCTGAAGAGACCGCTCAGCAGTTAAGAGCACTGACTGCTCTTCTAAAAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR CCA 72 bp | CTCATTACTGATAGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACTTTTAGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LITDSCEPPCGC*DLNSGLLEEQS Trigger: TGACTGCTCTTCTAAAAGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACTATCAGTAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR GCA 72 bp | TCAGTGCTCTTAACTGCTGAGCGGTCTCTTCAGCCCTaGTGTCAACAATCTTATTCATTTGTTTCCTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SVLLTAERSLQP*CQQSYSFVSSF Trigger: AAAAGAGGAAACAAATGAATAAGATTGTTGACAGCAGGGCTGAAGAGACCGCTCAGCAGTTAAGAGCACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR TCA 90 bp | ACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGACTACTGCAGCCACGCTaGTGGCAAAGAGAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSRGGGNRGPWKWAAGQGLLQPR*WQRELP Trigger: AGGCAGCTCTCTTTGCCATCAGCGTGGCTGCAGTAG...TCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | GCGGGCCTCACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTGGGCTGCGGCTGCCTGGTGTATATaGGTATCTGTACAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLTSRGGGNRGPWKWAAAAWCI*VSVQAR Trigger: CCTGGCCTGTACAGATACCCATATACACCAGGCAGC...CGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGTGAGGCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | GCGGGCCTCACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTGGGCTGCGATTGTGGCCACAGAATaGGAGGTGGCAGATCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: AGLTSRGGGNRGPWKWAAIVATE*EVADQN Trigger: ATTCTGATCTGCCACCTCCCATTCTGTGGCCACAAT...CGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGTGAGGCCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | GCGGGAACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGAAGCCCCATCTGTGGGTGTGAAGAGCAGGTaGAGAAAGCCCGGCGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: AGTGDPGSGLRAKEAPSVGVKSR*RKPGVS Trigger: GGAAACGCCGGGCTTTCTCCACCTGCTCTTCACACC...CACAGATGGGGCTTCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGTTCCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR TCA 90 bp | GCGGGCCTCACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTGGGCTGCGTTCTCCCTTGTTCAGTaGATAATTTCCCCCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: AGLTSRGGGNRGPWKWAAFSLVQ*IISPRK Trigger: CTTCCTGGGGGAAATTATTCACTGAACAAGGGAGAA...CGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGTGAGGCCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR GCA 90 bp | ACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGAAAAAGGAATGGCTACTaGAGCCACGCTGATGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: TSRGGGNRGPWKWAAGQGKRNGY*SHADGK Trigger: TTTGCCATCAGCGTGGCTGCAGTAGCCATTCCTTTT...TCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | ACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGAAGCCCCATCTGTGCTCGGCGCTGCCTGGTGTATATaGGTATCTGTACAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TGDPGSGLRAKEAPSVLGAAWCI*VSVQAR Trigger: CCTGGCCTGTACAGATACCCATATACACCAGGCAGC...GCCGAGCACAGATGGGGCTTCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR TCA 90 bp | GCGGGAACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGAAGCCCCATCTGTGAATGGTCAAAGGCAGTaGCAAAAGGAAACCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGTGDPGSGLRAKEAPSVNGQRQ*QKETQP Trigger: GGGCTGGGTTTCCTTTTGTCACTGCCTTTGACCATT...CACAGATGGGGCTTCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGTTCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | ACGTCACGCGGCGGCGGGAACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGATCAGTGGAGCAATGTTaGTGGAATAGCCAAGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: TSRGGGNRGPWKWAAGQGSVEQC*WNSQAL Trigger: TAGAGCTTGGCTATTCCACCAACATTGCTCCACTGA...TCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGTTCCCGCCGCCGCGTGACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | GCGGGAACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGAAGCCCCATCTGTGGAAAAGGGGCGGAAGTaGAAATATACCACTCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: AGTGDPGSGLRAKEAPSVEKGRK*KYTTPV Trigger: GACAGGAGTGGTATATTTCCACTTCCGCCCCTTTTC...CACAGATGGGGCTTCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGTTCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | ACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGAAGCCCCATCTGTGCTCGGCAGCCAAGCTCTAATGTaGCCAACACAAAAAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TGDPGSGLRAKEAPSVLGSQALM*PTQKGR Trigger: TCTTCCTTTTTGTGTTGGCCACATTAGAGCTTGGCT...GCCGAGCACAGATGGGGCTTCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR TCA 90 bp | TCAGGAGATCTGACAGCCTCTTCTGACCTCCTTGAGCACCAGGCATACACATGGTACAGGCCAGGCGCATaGCTGCAGGCATGTCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SGDLTASSDLLEHQAYTWYRPGA*LQACRR Trigger: TCTGCGACATGCCTGCAGTCATGCGCCTGGCCTGTA...CCATGTGTATGCCTGGTGCTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR GCA 90 bp | ACCGGGGACCCTGGAAGTGGGCTGCGGGCCAAGGAAGCCCCATCTGTGCTCGGCCAAAAGTCTTTTTACTaGATCAGTCACCTCTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: TGDPGSGLRAKEAPSVLGQKSFY*ISHLLV Trigger: AACCAAGAGGTGACTGATGCAGTAAAAAGACTTTTG...GCCGAGCACAGATGGGGCTTCCTTGGCCCGCAGCCCACTTCCAGGGTCCCCGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR TCA 90 bp | CCATCTGCAACTCCAGTTTCAGGAGATCTGACAGCCTCTTCTGACCTCCTTGAGGGGGTATGGAGGGAGTaGTCCTGCCAGACTGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PSATPVSGDLTASSDLLEGVWRE*SCQTVS Trigger: GCTCACAGTCTGGCAGGATCACTCCCTCCATACCCC...CTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGAAACTGGAGTTGCAGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR TCA 90 bp | CTCACATGGAGGCTCACAACCATCTGCAACTCCAGTTTCAGGAGATCTGACAGCGGGGTATGGAGGGAGTaGTCCTGCCAGACTGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LTWRLTTICNSSFRRSDSGVWRE*SCQTVS Trigger: GCTCACAGTCTGGCAGGATCACTCCCTCCATACCCC...GCTGTCAGATCTCCTGAAACTGGAGTTGCAGATGGTTGTGAGCCTCCATGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR GCA 90 bp | CCATCTGCAACTCCAGTTTCAGGAGATCTGACAGCCTCTTCTGACCTCCTTGAGGGCCAGGCGCATGACTaGAGGCATGTCGCAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PSATPVSGDLTASSDLLEGQAHD*RHVAEE Trigger: TTCTTCTGCGACATGCCTGCAGTCATGCGCCTGGCC...CTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGAAACTGGAGTTGCAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR TCA 90 bp | GCTGTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTACTGATAGTTGTGCTACTGCAGCCACGCTaGTGGCAAAGAGAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: AVFRHPRRGHQISLLIVVLLQPR*WQRELP Trigger: AGGCAGCTCTCTTTGCCATCAGCGTGGCTGCAGTAG...CACAACTATCAGTAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR GCA 90 bp | TCAGGAGATCTGACAGCCTCTTCTGACCTCCTTGAGCACCAGGCATACACATGGATCTGCCCACAGAGCTaGCAACTCATAATGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SGDLTASSDLLEHQAYTWICPQS*QLIMRL Trigger: CAGCCTCATTATGAGTTGGCAGCTCTGTGGGCAGAT...CCATGTGTATGCCTGGTGCTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | CTCACATGGAGGCTCACAACCATCTGCAACTCCAGTTTCAGGAGATCTGACAGCATGAAGAAGAACATCTaGGCCCCACAGCTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTWRLTTICNSSFRRSDSMKKNI*APQLGR Trigger: TCTGCCCAGCTGTGGGGCCCAGATGTTCTTCTTCAT...GCTGTCAGATCTCCTGAAACTGGAGTTGCAGATGGTTGTGAGCCTCCATGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR GCA 90 bp | CTCACATGGAGGCTCACAACCATCTGCAACTCCAGTTTCAGGAGATCTGACAGCATCTGCCCACAGAGCTaGCAACTCATAATGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTWRLTTICNSSFRRSDSICPQS*QLIMRL Trigger: CAGCCTCATTATGAGTTGGCAGCTCTGTGGGCAGAT...GCTGTCAGATCTCCTGAAACTGGAGTTGCAGATGGTTGTGAGCCTCCATGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTACTGATAGTTGTGGAACCTAAAGCCATCTaGCCACAGAGCTGCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: AVFRHPRRGHQISLLIVVEPKAI*PQSCQL Trigger: GAGTTGGCAGCTCTGTGGGCAGATGGCTTTAGGTTC...CACAACTATCAGTAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | TCAGGAGATCTGACAGCCTCTTCTGACCTCCTTGAGCACCAGGCATACACATGGGCAAAGAGAGCTGCCTaGTGTATATGGGTATCTGTA | + |
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Preference number: 4 (lower is better) Translates to: SGDLTASSDLLEHQAYTWAKRAA*CIWVSV Trigger: TACAGATACCCATATACACCAGGCAGCTCTCTTTGC...CCATGTGTATGCCTGGTGCTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR TCA 90 bp | GAGCCTGTGGGGAAGAGACTACTATCTACTTTTAATGTGAAGGAAATAATAGGGTACAGGCCAGGCGCATaGCTGCAGGCATGTCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: EPVGKRLLSTFNVKEIIGYRPGA*LQACRR Trigger: TCTGCGACATGCCTGCAGTCATGCGCCTGGCCTGTA...CCCTATTATTTCCTTCACATTAAAAGTAGATAGTAGTCTCTTCCCCACAGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR TCA 90 bp | CCATCTGCAACTCCAGTTTCAGGAGATCTGACAGCCTCTTCTGACCTCCTTGAGTTCTCCCTTGTTCAGTaGATAATTTCCCCCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PSATPVSGDLTASSDLLEFSLVQ*IISPRK Trigger: CTTCCTGGGGGAAATTATTCACTGAACAAGGGAGAA...CTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGAAACTGGAGTTGCAGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR GCA 90 bp | GCATCAGATCTCATTACTGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGGAACCTAAAGCCATCTaGCCACAGAGCTGCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: ASDLITDSCEPPCGCWDLEPKAI*PQSCQL Trigger: GAGTTGGCAGCTCTGTGGGCAGATGGCTTTAGGTTC...CAAATCCCAGCAACCACATGGTGGCTCACAACTATCAGTAATGAGATCTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTACTGATAGTTGTGGATGGCAAAGAGAGCTaGCTGGTGTATATGGGTATC | + |
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Preference number: 4 (lower is better) Translates to: AVFRHPRRGHQISLLIVVDGKES*LVYMGI Trigger: GATACCCATATACACCAGGCAGCTCTCTTTGCCATC...CACAACTATCAGTAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTACTGATAGTTGTGAAAAGGAATGGCTACTaGAGCCACGCTGATGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: AVFRHPRRGHQISLLIVVKRNGY*SHADGK Trigger: TTTGCCATCAGCGTGGCTGCAGTAGCCATTCCTTTT...CACAACTATCAGTAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTACTGATAGTTGTGGAAAAGGGGCGGAAGTaGAAATATACCACTCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: AVFRHPRRGHQISLLIVVEKGRK*KYTTPV Trigger: GACAGGAGTGGTATATTTCCACTTCCGCCCCTTTTC...CACAACTATCAGTAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTACTGATAGTTGTGATTGTGGCCACAGAATaGGAGGTGGCAGATCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: AVFRHPRRGHQISLLIVVIVATE*EVADQN Trigger: ATTCTGATCTGCCACCTCCCATTCTGTGGCCACAAT...CACAACTATCAGTAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | TCAGGAGATCTGACAGCCTCTTCTGACCTCCTTGAGCACCAGGCATACACATGGAGGAAGGAATCTTTCTaGCTTTCTGAACCAGAACAT | + |
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Preference number: 4 (lower is better) Translates to: SGDLTASSDLLEHQAYTWRKESF*LSEPEH Trigger: ATGTTCTGGTTCAGAAAGCCAGAAAGATTCCTTCCT...CCATGTGTATGCCTGGTGCTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR TCA 90 bp | CCATCTGCAACTCCAGTTTCAGGAGATCTGACAGCCTCTTCTGACCTCCTTGAGATCTTTCTGGCTTTCTaGACCAGAACATTCTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PSATPVSGDLTASSDLLEIFLAF*TRTFLS Trigger: TGACAAGAATGTTCTGGTTCAGAAAGCCAGAAAGAT...CTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGAAACTGGAGTTGCAGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR GCA 90 bp | GCATCAGATCTCATTACTGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGGATGGCAAAGAGAGCTaGCTGGTGTATATGGGTATC | + |
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Preference number: 4 (lower is better) Translates to: ASDLITDSCEPPCGCWDLDGKES*LVYMGI Trigger: GATACCCATATACACCAGGCAGCTCTCTTTGCCATC...CAAATCCCAGCAACCACATGGTGGCTCACAACTATCAGTAATGAGATCTGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR GCA 90 bp | TCAGGAGATCTGACAGCCTCTTCTGACCTCCTTGAGCACCAGGCATACACATGGCAAAAGTCTTTTTACTaGATCAGTCACCTCTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: SGDLTASSDLLEHQAYTWQKSFY*ISHLLV Trigger: AACCAAGAGGTGACTGATGCAGTAAAAAGACTTTTG...CCATGTGTATGCCTGGTGCTCAAGGAGGTCAGAAGAGGCTGTCAGATCTCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | GCATCAGATCTCATTACTGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGCCACAGAATGGGAGGTaGCAGATCAGAATGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASDLITDSCEPPCGCWDLPQNGR*QIRMVK Trigger: TTTGACCATTCTGATCTGCCACCTCCCATTCTGTGG...CAAATCCCAGCAACCACATGGTGGCTCACAACTATCAGTAATGAGATCTGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTACTGATAGTTGTGGCAAAGAGAGCTGCCTaGTGTATATGGGTATCTGTA | + |
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Preference number: 4 (lower is better) Translates to: AVFRHPRRGHQISLLIVVAKRAA*CIWVSV Trigger: TACAGATACCCATATACACCAGGCAGCTCTCTTTGC...CACAACTATCAGTAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | CAACTTTGTTTGTTGGACCCTAAAACTGAGCCCTTACTATATCCTTTGCAATGTGGTGTGAAGAGCAGGTaGAGAAAGCCCGGCGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLCLLDPKTEPLLYPLQCGVKSR*RKPGVS Trigger: GGAAACGCCGGGCTTTCTCCACCTGCTCTTCACACC...ACATTGCAAAGGATATAGTAAGGGCTCAGTTTTAGGGTCCAACAAACAAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR CAA 72 bp | ACTGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACTTTTAGAAGAGCAGTCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TDSCEPPCGCWD*NSGLLEEQSVL Trigger: GAGCACTGACTGCTCTTCTAAAAGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACTATCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | GAGCCTGTGGGGAAGAGACTACTATCTACTTTTAATGTGAAGGAAATAATAGGGATGAAGAAGAACATCTaGGCCCCACAGCTGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: EPVGKRLLSTFNVKEIIGMKKNI*APQLGR Trigger: TCTGCCCAGCTGTGGGGCCCAGATGTTCTTCTTCAT...CCCTATTATTTCCTTCACATTAAAAGTAGATAGTAGTCTCTTCCCCACAGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | GAGCCTGTGGGGAAGAGACTACTATCTACTTTTAATGTGAAGGAAATAATAGGGGGTGGCAGATCAGAATaGTCAAAGGCAGTGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: EPVGKRLLSTFNVKEIIGGGRSE*SKAVTK Trigger: TTTTGTCACTGCCTTTGACCATTCTGATCTGCCACC...CCCTATTATTTCCTTCACATTAAAAGTAGATAGTAGTCTCTTCCCCACAGGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | ACTCAACTTTGTTTGTTGGACCCTAAAACTGAGCCCTTACTATATCCTTTGCAACCACAGAATGGGAGGTaGCAGATCAGAATGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: TQLCLLDPKTEPLLYPLQPQNGR*QIRMVK Trigger: TTTGACCATTCTGATCTGCCACCTCCCATTCTGTGG...TTGCAAAGGATATAGTAAGGGCTCAGTTTTAGGGTCCAACAAACAAAGTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | CAACTTTGTTTGTTGGACCCTAAAACTGAGCCCTTACTATATCCTTTGCAATGTGGTGGCAGATCAGAATaGTCAAAGGCAGTGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QLCLLDPKTEPLLYPLQCGGRSE*SKAVTK Trigger: TTTTGTCACTGCCTTTGACCATTCTGATCTGCCACC...ACATTGCAAAGGATATAGTAAGGGCTCAGTTTTAGGGTCCAACAAACAAAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | ACTCAACTTTGTTTGTTGGACCCTAAAACTGAGCCCTTACTATATCCTTTGCAAAGCCAAGCTCTAATGTaGCCAACACAAAAAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TQLCLLDPKTEPLLYPLQSQALM*PTQKGR Trigger: TCTTCCTTTTTGTGTTGGCCACATTAGAGCTTGGCT...TTGCAAAGGATATAGTAAGGGCTCAGTTTTAGGGTCCAACAAACAAAGTTGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR CCA 90 bp | GAGCCTGTGGGGAAGAGACTACTATCTACTTTTAATGTGAAGGAAATAATAGGGAGGAAGGAATCTTTCTaGCTTTCTGAACCAGAACAT | + |
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Preference number: 4 (lower is better) Translates to: EPVGKRLLSTFNVKEIIGRKESF*LSEPEH Trigger: ATGTTCTGGTTCAGAAAGCCAGAAAGATTCCTTCCT...CCCTATTATTTCCTTCACATTAAAAGTAGATAGTAGTCTCTTCCCCACAGGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS-3UTR TCA 90 bp | GGGGTCTACAAGCCTTTAAAGTGTAACAGAATGATAGTTATCTATCACCTGTTGATCTTTCTGGCTTTCTaGACCAGAACATTCTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: GVYKPLKCNRMIVIYHLLIFLAF*TRTFLS Trigger: TGACAAGAATGTTCTGGTTCAGAAAGCCAGAAAGAT...CAACAGGTGATAGATAACTATCATTCTGTTACACTTTAAAGGCTTGTAGACCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| 3UTR CAA 72 bp | ATAAACAAAGGAAAGATGAGAACTCAACTTTGTTTGTaGGACCCTAAAACTGAGCCCTTACTATATCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: INKGKMRTQLCL*DPKTEPLLYPL Trigger: CAAAGGATATAGTAAGGGCTCAGTTTTAGGGTCCAACAAACAAAGTTGAGTTCTCATCTTTCCTTTGTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS GCA 72 bp | AATGGCTACTGCAGCCACGCTGATGGCAAAGAGAGCTaGCTGGTGTATATGGGTATCTGTACAGGCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: NGYCSHADGKES*LVYMGICTGQA Trigger: CGCCTGGCCTGTACAGATACCCATATACACCAGGCAGCTCTCTTTGCCATCAGCGTGGCTGCAGTAGCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087857.3 ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS GCA 72 bp | CAGCAATGGGGAGAAGAAGGTATAGACAACAGATACTaGCCGGCCTTCTTCCGGGGAGTAGCTGGAGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: QQWGEEGIDNRY*PAFFRGVAGAR Trigger: CCTAGCTCCAGCTACTCCCCGGAAGAAGGCCGGGCAGTATCTGTTGTCTATACCTTCTTCTCCCCATTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087857.3 ENSMUST00000213954.2 ENSMUST00000217617.2 |
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| CDS CCA 72 bp | GTGGAGCAATGTTGGTGGAATAGCCAAGCTCTAATGTaGCCAACACAAAAAGGAAGAAGTACATCGGGGTAT | + |
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Preference number: 6 (lower is better) Translates to: VEQCWWNSQALM*PTQKGRSTSGY Trigger: ATACCCCGATGTACTTCTTCCTTTTTGTGTTGGCCACATTAGAGCTTGGCTATTCCACCAACATTGCTCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087857.3 ENSMUST00000213954.2 ENSMUST00000217617.2 |
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