Pregenerated sensors for OLFR1418 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060556Ensembl transcript IDs: ENSMUST00000079875.4, ENSMUST00000214796.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTACCACTATTAAATTTGCACCAACACTGGAATGTTCTCGATTTTaGTCTTCTCTTGCTGTGGCTTCAACCCTTTCCAGAGGCACAGTG | + |
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Preference number: 1 (lower is better) Translates to: PTTIKFAPTLECSRF*SSLAVASTLSRGTV Trigger: CACTGTGCCTCTGGAAAGGGTTGAAGCCACAGCAAGAGAAGACCAAAATCGAGAACATTCCAGTGTTGGTGCAAATTTAATAGTGGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR TCA 90 bp | GAAGAAGAAAGAATTTGTCACAAGGTGAGGGACCAGATGTCACCATaGGAACACACACGGAGCAGAGAGAGCCAGATCAATACTAAAATG | + |
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Preference number: 1 (lower is better) Translates to: EEERICHKVRDQMSP*EHTRSRESQINTKM Trigger: CATTTTAGTATTGATCTGGCTCTCTCTGCTCCGTGTGTGTTCTCATGGTGACATCTGGTCCCTCACCTTGTGACAAATTCTTTCTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR CCA 90 bp | GCTGGCTTAGAGAAAAACCTACCACTATTAAATTTGCACCAACACTaGAATGTTCTCGATTTTGGTCTTCTCTTGCTGTGGCTTCAACCC | + |
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Preference number: 1 (lower is better) Translates to: AGLEKNLPLLNLHQH*NVLDFGLLLLWLQP Trigger: GGGTTGAAGCCACAGCAAGAGAAGACCAAAATCGAGAACATTCCAGTGTTGGTGCAAATTTAATAGTGGTAGGTTTTTCTCTAAGCCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR CCA 90 bp | TGTAAACATTACTCCCCACTTATCTCTGATTGGTTAATAAAAAGCTaGTCAGCCAATGACTTGGCAGAGGAGGTAATAGGACAGGACTTC | + |
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Preference number: 1 (lower is better) Translates to: CKHYSPLISDWLIKS*SANDLAEEVIGQDF Trigger: GAAGTCCTGTCCTATTACCTCCTCTGCCAAGTCATTGGCTGACCAGCTTTTTATTAACCAATCAGAGATAAGTGGGGAGTAATGTTTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR CCA 90 bp | CCTGTCACAATGTTGTGTAAACATTACTCCCCACTTATCTCTGATTaGTTAATAAAAAGCTGGTCAGCCAATGACTTGGCAGAGGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: PVTMLCKHYSPLISD*LIKSWSANDLAEEV Trigger: TACCTCCTCTGCCAAGTCATTGGCTGACCAGCTTTTTATTAACCAATCAGAGATAAGTGGGGAGTAATGTTTACACAACATTGTGACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCCAGGAGTGATGACATGTCAGTCAGGAGCTTGGGTTTTGCCTATATATGGTGGTCTTCTCTTGCTGTaGCTTCAACCCTTTCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: RPGVMTCQSGAWVLPIYGGLLLL*LQPFPE Trigger: CTCTGGAAAGGGTTGAAGCCACAGCAAGAGAAGACC...ACCATATATAGGCAAAACCCAAGCTCCTGACTGACATGTCATCACTCCTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR-3UTR GCA 90 bp | TGCACCAACACTGGAATGTTCTCGATTTTGGTCTTCTCTTGCTGTGGCTTCAACACCATGCACGTGGTATaGAGACCTTTGTTCAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: CTNTGMFSILVFSCCGFNTMHVV*RPLFKQ Trigger: TTGCTTGAACAAAGGTCTGCATACCACGTGCATGGT...GTTGAAGCCACAGCAAGAGAAGACCAAAATCGAGAACATTCCAGTGTTGGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACCAACACTGGAATGTTCTCGATTTTGGTCTTCTCTTGCTGTGGCTTCAACGAAGAGATGGCTCAGTaGTTAAAAGCATGTCCTATG | + |
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Preference number: 2 (lower is better) Translates to: CTNTGMFSILVFSCCGFNEEMAQ*LKACPM Trigger: CATAGGACATGCTTTTAACCACTGAGCCATCTCTTC...GTTGAAGCCACAGCAAGAGAAGACCAAAATCGAGAACATTCCAGTGTTGGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR CAA 90 bp | AGGAAGATAGCAGCTGGCTTAGAGAAAAACCTACCACTATTAAATTaGCACCAACACTGGAATGTTCTCGATTTTGGTCTTCTCTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: RKIAAGLEKNLPLLN*HQHWNVLDFGLLLL Trigger: CAGCAAGAGAAGACCAAAATCGAGAACATTCCAGTGTTGGTGCAAATTTAATAGTGGTAGGTTTTTCTCTAAGCCAGCTGCTATCTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR-3UTR CCA 90 bp | GAACACACACGGAGCAGAGAGAGCCAGATCAATACTAAAATGCAAGCATCTTGGTTAAACGTAAATGCTTaGAGCATTTTCATCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: EHTRSRESQINTKMQASWLNVNA*SIFIPI Trigger: AATGGGGATGAAAATGCTCCAAGCATTTACGTTTAA...CCAAGATGCTTGCATTTTAGTATTGATCTGGCTCTCTCTGCTCCGTGTGTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAAAGAATTTGTCACAAGGTGAGGGACCAGATGTCACCATGAGAACACACAATTTGCACCAACACTaGAATGTTCTCGATTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: RRKNLSQGEGPDVTMRTHNLHQH*NVLDFG Trigger: ACCAAAATCGAGAACATTCCAGTGTTGGTGCAAATT...GTGTGTTCTCATGGTGACATCTGGTCCCTCACCTTGTGACAAATTCTTTCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR TCA 72 bp | GGTGATAACGTGTTAGCCCGGACATGCCAGCAGGGTTaGGGGAAGGAGGGCAGCTGGGTTTCTCCCAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: GDNVLARTCQQG*GKEGSWVSPSL Trigger: CAAGCTGGGAGAAACCCAGCTGCCCTCCTTCCCTCAACCCTGCTGGCATGTCCGGGCTAACACGTTATCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR-3UTR CAA 90 bp | AAGAATTTGTCACAAGGTGAGGGACCAGATGTCACCATGAGAACACACACGGAGCAGTGCCTCCAGACCTaGGTTAACCATGCACGTGGT | + |
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Preference number: 3 (lower is better) Translates to: KNLSQGEGPDVTMRTHTEQCLQT*VNHARG Trigger: ACCACGTGCATGGTTAACCAAGGTCTGGAGGCACTG...CTCCGTGTGTGTTCTCATGGTGACATCTGGTCCCTCACCTTGTGACAAATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR CCA 72 bp | GACATGTCAGTCAGGAGCTTGGGTTTTGCCTATATATaGTCAAAAGCTGAGCTATGGGTGGGCGTTTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: DMSVRSLGFAYI*SKAELWVGVWH Trigger: GTGCCAAACGCCCACCCATAGCTCAGCTTTTGACCATATATAGGCAAAACCCAAGCTCCTGACTGACATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR TCA 72 bp | AGAATTTGTCACAAGGTGAGGGACCAGATGTCACCATaGGAACACACACGGAGCAGAGAGAGCCAGATCAAT | + |
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Preference number: 3 (lower is better) Translates to: RICHKVRDQMSP*EHTRSRESQIN Trigger: ATTGATCTGGCTCTCTCTGCTCCGTGTGTGTTCTCATGGTGACATCTGGTCCCTCACCTTGTGACAAATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR TCA 72 bp | GTAGTGAGAGGGAAGAAGAAAGAATTTGTCACAAGGTaGGGGACCAGATGTCACCATGAGAACACACACGGA | + |
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Preference number: 3 (lower is better) Translates to: VVRGKKKEFVTR*GTRCHHENTHG Trigger: TCCGTGTGTGTTCTCATGGTGACATCTGGTCCCTCACCTTGTGACAAATTCTTTCTTCTTCCCTCTCACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR GCA 72 bp | ACCAACACTGGAATGTTCTCGATTTTGGTCTTCTCTTaGTGTGGCTTCAACCCTTTCCAGAGGCACAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: TNTGMFSILVFS*CGFNPFQRHSV Trigger: AACACTGTGCCTCTGGAAAGGGTTGAAGCCACAGCAAGAGAAGACCAAAATCGAGAACATTCCAGTGTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR-3UTR CAA 90 bp | ACACACGGAGCAGAGAGAGCCAGATCAATACTAAAATGCAAGCATCTTGGGAGTGATTTTGGTCTTCTCTaGCTGTGGCTTCAACCCTTT | + |
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Preference number: 3 (lower is better) Translates to: THGAERARSILKCKHLGSDFGLL*LWLQPF Trigger: AAAGGGTTGAAGCCACAGCAAGAGAAGACCAAAATC...ACTCCCAAGATGCTTGCATTTTAGTATTGATCTGGCTCTCTCTGCTCCGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCCAGGAGTGATGACATGTCAGTCAGGAGCTTGGGTTTTGCCTATATATGGTACTCCTGTCACAATGTaGTGTAAACATTACTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: RPGVMTCQSGAWVLPIYGTPVTM*CKHYSP Trigger: TGGGGAGTAATGTTTACACAACATTGTGACAGGAGT...ACCATATATAGGCAAAACCCAAGCTCCTGACTGACATGTCATCACTCCTGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR CCA 72 bp | CATGTCCTATGCTTTCAATTTTCAGCACAAACATGGTaGCTCACAACTGTCTATAACTCTAGTGGCAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: HVLCFQFSAQTW*LTTVYNSSGSA Trigger: GGCACTGCCACTAGAGTTATAGACAGTTGTGAGCCACCATGTTTGTGCTGAAAATTGAAAGCATAGGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCCAGGAGTGATGACATGTCAGTCAGGAGCTTGGGTTTTGCCTATATATGGTGAGTCATTACAGAGATaGGAATGTTGGCATAATGTT | + |
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Preference number: 3 (lower is better) Translates to: RPGVMTCQSGAWVLPIYGESLQR*ECWHNV Trigger: AACATTATGCCAACATTCCAATCTCTGTAATGACTC...ACCATATATAGGCAAAACCCAAGCTCCTGACTGACATGTCATCACTCCTGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR CCA 72 bp | TACTCCCCACTTATCTCTGATTGGTTAATAAAAAGCTaGTCAGCCAATGACTTGGCAGAGGAGGTAATAGGA | + |
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Preference number: 3 (lower is better) Translates to: YSPLISDWLIKS*SANDLAEEVIG Trigger: TCCTATTACCTCCTCTGCCAAGTCATTGGCTGACCAGCTTTTTATTAACCAATCAGAGATAAGTGGGGAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAATTTTCAGCACAAACATGGTGGCTCACAACTGTCTATAACTCTAGTGGCAATTGGCAATTCTGTCTaGAAAAGCCCACACTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: FNFQHKHGGSQLSITLVAIGNSV*KSPHSS Trigger: AGAGGAGTGTGGGCTTTTCAAGACAGAATTGCCAAT...TGCCACTAGAGTTATAGACAGTTGTGAGCCACCATGTTTGTGCTGAAAATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR CCA 72 bp | AAGCATGTCCTATGCTTTCAATTTTCAGCACAAACATaGTGGCTCACAACTGTCTATAACTCTAGTGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: KHVLCFQFSAQT*WLTTVYNSSGS Trigger: ACTGCCACTAGAGTTATAGACAGTTGTGAGCCACCATGTTTGTGCTGAAAATTGAAAGCATAGGACATGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR CCA 72 bp | ATTAAATTTGCACCAACACTGGAATGTTCTCGATTTTaGTCTTCTCTTGCTGTGGCTTCAACCCTTTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: IKFAPTLECSRF*SSLAVASTLSR Trigger: TCTGGAAAGGGTTGAAGCCACAGCAAGAGAAGACCAAAATCGAGAACATTCCAGTGTTGGTGCAAATTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR-3UTR CAA 90 bp | ACCCTTTCCAGAGGCACAGTGTTGAAGGTTGCTAACAATCTAAAAACTATATCTGTGGTATGCAGACCTTaGTTCAAGCAAAACACCCAT | + |
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Preference number: 3 (lower is better) Translates to: TLSRGTVLKVANNLKTISVVCRP*FKQNTH Trigger: ATGGGTGTTTTGCTTGAACAAAGGTCTGCATACCAC...AGATATAGTTTTTAGATTGTTAGCAACCTTCAACACTGTGCCTCTGGAAAGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR CCA 72 bp | GAGAAAAACCTACCACTATTAAATTTGCACCAACACTaGAATGTTCTCGATTTTGGTCTTCTCTTGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: EKNLPLLNLHQH*NVLDFGLLLLW Trigger: CCACAGCAAGAGAAGACCAAAATCGAGAACATTCCAGTGTTGGTGCAAATTTAATAGTGGTAGGTTTTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR CCA 72 bp | ATGTTGTGTAAACATTACTCCCCACTTATCTCTGATTaGTTAATAAAAAGCTGGTCAGCCAATGACTTGGCA | + |
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Preference number: 3 (lower is better) Translates to: MLCKHYSPLISD*LIKSWSANDLA Trigger: TGCCAAGTCATTGGCTGACCAGCTTTTTATTAACCAATCAGAGATAAGTGGGGAGTAATGTTTACACAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR GCA 72 bp | CAAACCAAAGGTATATCAAGCCCCACTTCCTCATATTaGGTATACTCAACTCAGAATTTCTATACAAGATAT | + |
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Preference number: 3 (lower is better) Translates to: QTKGISSPTSSY*VYSTQNFYTRY Trigger: ATATCTTGTATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGGGCTTGATATACCTTTGGTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| CDS-3UTR GCA 90 bp | TGCACCAACACTGGAATGTTCTCGATTTTGGTCTTCTCTTGCTGTGGCTTCAACCTGGGCACCACAGCCTaGCAAGGAAACCACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: CTNTGMFSILVFSCCGFNLGTTA*QGNHSP Trigger: AGGACTGTGGTTTCCTTGGCAGGCTGTGGTGCCCAG...GTTGAAGCCACAGCAAGAGAAGACCAAAATCGAGAACATTCCAGTGTTGGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| 3UTR CAA 72 bp | CACCAACACTGGAATGTTCTCGATTTTGGTCTTCTCTaGCTGTGGCTTCAACCCTTTCCAGAGGCACAGTGT | + |
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Preference number: 4 (lower is better) Translates to: HQHWNVLDFGLL*LWLQPFPEAQC Trigger: ACACTGTGCCTCTGGAAAGGGTTGAAGCCACAGCAAGAGAAGACCAAAATCGAGAACATTCCAGTGTTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| CDS-3UTR GCA 90 bp | CCCCACTTCCTCATATTGCGTATACTCAACTCAGAATTTCTATACAAGATATTGCTGGGCACCACAGCCTaGCAAGGAAACCACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PHFLILRILNSEFLYKILLGTTA*QGNHSP Trigger: AGGACTGTGGTTTCCTTGGCAGGCTGTGGTGCCCAG...CAATATCTTGTATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS-3UTR CCA 90 bp | TGCACCAACACTGGAATGTTCTCGATTTTGGTCTTCTCTTGCTGTGGCTTCAACCTACAGAAAGGCAATTaGAAGATGAGCACAGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: CTNTGMFSILVFSCCGFNLQKGN*KMSTVN Trigger: GTTGACTGTGCTCATCTTCCAATTGCCTTTCTGTAG...GTTGAAGCCACAGCAAGAGAAGACCAAAATCGAGAACATTCCAGTGTTGGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| CDS-3UTR GCA 90 bp | AAAAGCATGTCCTATGCTTTCAATTTTCAGCACAAACATGGTGGCTCACAACTGAACTGGACACACAAGTaGCAGCTCATGATGAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: KSMSYAFNFQHKHGGSQLNWTHK*QLMMRV Trigger: TACCCTCATCATGAGCTGGCACTTGTGTGTCCAGTT...CAGTTGTGAGCCACCATGTTTGTGCTGAAAATTGAAAGCATAGGACATGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| CDS-3UTR GCA 90 bp | CCCCACTTCCTCATATTGCGTATACTCAACTCAGAATTTCTATACAAGATATTGATGGGTGTCTGCACATaGCAGTCTCATGACAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PHFLILRILNSEFLYKILMGVCT*QSHDRE Trigger: CTCCCTGTCATGAGACTGGCATGTGCAGACACCCAT...CAATATCTTGTATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS-3UTR GCA 90 bp | CCCCACTTCCTCATATTGCGTATACTCAACTCAGAATTTCTATACAAGATATTGATGGACATGGGTGTCTaGACATGCCAGTCTCATGAC | + |
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Preference number: 4 (lower is better) Translates to: PHFLILRILNSEFLYKILMDMGV*TCQSHD Trigger: GTCATGAGACTGGCATGTGCAGACACCCATGTCCAT...CAATATCTTGTATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS-3UTR GCA 90 bp | CCCCACTTCCTCATATTGCGTATACTCAACTCAGAATTTCTATACAAGATATTGAACTGGACACACAAGTaGCAGCTCATGATGAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: PHFLILRILNSEFLYKILNWTHK*QLMMRV Trigger: TACCCTCATCATGAGCTGGCACTTGTGTGTCCAGTT...CAATATCTTGTATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS-3UTR GCA 90 bp | CCCACTTCCTCATATTGCGTATACTCAACTCAGAATTTCTATACAAGATATTGTATGAGCACAGTCAACTaGATGGCCAAGATGAAACCC | + |
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Preference number: 4 (lower is better) Translates to: PTSSYCVYSTQNFYTRYCMSTVN*MAKMKP Trigger: GGGTTTCATCTTGGCCATGCAGTTGACTGTGCTCAT...ACAATATCTTGTATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| 3UTR CAA 72 bp | GCAGCTGGCTTAGAGAAAAACCTACCACTATTAAATTaGCACCAACACTGGAATGTTCTCGATTTTGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: AAGLEKNLPLLN*HQHWNVLDFGL Trigger: AAGACCAAAATCGAGAACATTCCAGTGTTGGTGCAAATTTAATAGTGGTAGGTTTTTCTCTAAGCCAGCTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| CDS-3UTR CCA 90 bp | CCCACTTCCTCATATTGCGTATACTCAACTCAGAATTTCTATACAAGATATTGTCTACAGAAAGGCAATTaGAAGATGAGCACAGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: PTSSYCVYSTQNFYTRYCLQKGN*KMSTVN Trigger: GTTGACTGTGCTCATCTTCCAATTGCCTTTCTGTAG...ACAATATCTTGTATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS-3UTR CCA 90 bp | CCCCACTTCCTCATATTGCGTATACTCAACTCAGAATTTCTATACAAGATATTGAGTGCTTCTTGTGTTTaGATCAGAACCAATTTCATT | + |
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Preference number: 4 (lower is better) Translates to: PHFLILRILNSEFLYKILSASCV*IRTNFI Trigger: AATGAAATTGGTTCTGATCCAAACACAAGAAGCACT...CAATATCTTGTATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS-3UTR CCA 90 bp | GTATATCAAGCCCCACTTCCTCATATTGCGTATACTCAACTCAGAATTTCTATAAGTGCTTCTTGTGTTTaGATCAGAACCAATTTCATT | + |
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Preference number: 4 (lower is better) Translates to: VYQAPLPHIAYTQLRISISASCV*IRTNFI Trigger: AATGAAATTGGTTCTGATCCAAACACAAGAAGCACT...TATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGGGCTTGATATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| CDS GCA 90 bp | TCCTTACTGCTACAGAAAGGCAATTGGAAGATGAGCACAGTCAACTaGATGGCCAAGATGAAACCCAGCAACAGGGACCCCAGGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: SLLLQKGNWKMSTVN*MAKMKPSNRDPRAN Trigger: GTTGGCCCTGGGGTCCCTGTTGCTGGGTTTCATCTTGGCCATGCAGTTGACTGTGCTCATCTTCCAATTGCCTTTCTGTAGCAGTAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS-3UTR CAA 90 bp | AAAAACAGCAGGATGGGGAGGAGGACTGTGAAATACTTGTCTTCTAGATATGTCCTCCTCAAAGCATCCTaGAGTTCTCTGTTCCTCATG | + |
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Preference number: 5 (lower is better) Translates to: KNSRMGRRTVKYLSSRYVLLKAS*SSLFLM Trigger: CATGAGGAACAGAGAACTCAAGGATGCTTTGAGGAG...GACATATCTAGAAGACAAGTATTTCACAGTCCTCCTCCCCATCCTGCTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214796.2 |
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| CDS-3UTR CAA 90 bp | CCCCACTTCCTCATATTGCGTATACTCAACTCAGAATTTCTATACAAGATATTGCTCCTCAAAGCATCCTaGAGTTCTCTGTTCCTCATG | + |
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Preference number: 5 (lower is better) Translates to: PHFLILRILNSEFLYKILLLKAS*SSLFLM Trigger: CATGAGGAACAGAGAACTCAAGGATGCTTTGAGGAG...CAATATCTTGTATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS-3UTR CAA 90 bp | CCCCACTTCCTCATATTGCGTATACTCAACTCAGAATTTCTATACAAGATATTGGCTACAGAAAGGCAATaGGAAGATGAGCACAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: PHFLILRILNSEFLYKILATERQ*EDEHSQ Trigger: TTGACTGTGCTCATCTTCCAATTGCCTTTCTGTAGC...CAATATCTTGTATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS-3UTR CAA 90 bp | CCCACTTCCTCATATTGCGTATACTCAACTCAGAATTTCTATACAAGATATTGTGCTACAGAAAGGCAATaGGAAGATGAGCACAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: PTSSYCVYSTQNFYTRYCATERQ*EDEHSQ Trigger: TTGACTGTGCTCATCTTCCAATTGCCTTTCTGTAGC...ACAATATCTTGTATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS-3UTR CAA 90 bp | CCCCACTTCCTCATATTGCGTATACTCAACTCAGAATTTCTATACAAGATATTGGAGTGCTTCTTGTGTTaGGATCAGAACCAATTTCAT | + |
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Preference number: 5 (lower is better) Translates to: PHFLILRILNSEFLYKILECFLC*DQNQFH Trigger: ATGAAATTGGTTCTGATCCAAACACAAGAAGCACTC...CAATATCTTGTATAGAAATTCTGAGTTGAGTATACGCAATATGAGGAAGTGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS GCA 72 bp | AGGTACATCATGAGGAAAAGCACAAAGATCAGCATCTaGACCTCAGGGAGTTTGGAGAAGGGGCGGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: RYIMRKSTKISI*TSGSLEKGRKW Trigger: CCACTTCCGCCCCTTCTCCAAACTCCCTGAGGTGCAGATGCTGATCTTTGTGCTTTTCCTCATGATGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS GCA 72 bp | CTACAGAAAGGCAATTGGAAGATGAGCACAGTCAACTaGATGGCCAAGATGAAACCCAGCAACAGGGACCCC | + |
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Preference number: 6 (lower is better) Translates to: LQKGNWKMSTVN*MAKMKPSNRDP Trigger: GGGGTCCCTGTTGCTGGGTTTCATCTTGGCCATGCAGTTGACTGTGCTCATCTTCCAATTGCCTTTCTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS CCA 72 bp | AACAAGCTGATTTCCTTACTGCTACAGAAAGGCAATTaGAAGATGAGCACAGTCAACTGCATGGCCAAGATG | + |
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Preference number: 6 (lower is better) Translates to: NKLISLLLQKGN*KMSTVNCMAKM Trigger: CATCTTGGCCATGCAGTTGACTGTGCTCATCTTCCAATTGCCTTTCTGTAGCAGTAAGGAAATCAGCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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| CDS CAA 72 bp | GAACAAGCTGATTTCCTTACTGCTACAGAAAGGCAATaGGAAGATGAGCACAGTCAACTGCATGGCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: EQADFLTATERQ*EDEHSQLHGQD Trigger: ATCTTGGCCATGCAGTTGACTGTGCTCATCTTCCAATTGCCTTTCTGTAGCAGTAAGGAAATCAGCTTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079875.4 ENSMUST00000214796.2 |
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