RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1417 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000048292

Ensembl transcript IDs: ENSMUST00000061235.3, ENSMUST00000214887.2

Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCTTGCTGCTAGTTTTGACCTTTCCCATGTTCAGTATACAGGAATaGCATAAACATCAGACTGGAGAAAAGTCGAAGATTAGACAGATG +
Preference number: 1 (lower is better)
Translates to: VLLLVLTFPMFSIQE*HKHQTGEKSKIRQM
Trigger: CATCTGTCTAATCTTCGACTTTTCTCCAGTCTGATGTTTATGGCATTCCTGTATACTGAACATGGGAAAGGTCAAAACTAGCAGCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
3UTR GCA 90 bp AAAACAGTACTCACATATGAAATACTCAAAGGAACTCAAACTTTATaGAATGGGAATCATGGGAGAGGTCAGAGTAGAATGTTCCTGGCT +
Preference number: 1 (lower is better)
Translates to: KTVLTYEILKGTQTL*NGNHGRGQSRMFLA
Trigger: AGCCAGGAACATTCTACTCTGACCTCTCCCATGATTCCCATTGCATAAAGTTTGAGTTCCTTTGAGTATTTCATATGTGAGTACTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
3UTR-3UTR GCA 90 bp CATGAATTTGAGAATGGGTTGAGCAGGAGGATATGGGAGGAGTTGGAGGGGACAGGAACTCAAACTTTATaGAATGGGAATCATGGGAGA +
Preference number: 2 (lower is better)
Translates to: HEFENGLSRRIWEELEGTGTQTL*NGNHGR
Trigger: TCTCCCATGATTCCCATTGCATAAAGTTTGAGTTCC...TGTCCCCTCCAACTCCTCCCATATCCTCCTGCTCAACCCATTCTCAAATTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
3UTR-3UTR CCA 90 bp GCATGCTGGGAAAGTTCAGGCTTAAGTAAATTCCCTACTGGACCAGTCTGTAAGAGAGTAGAATGTTCCTaGCTTAACACTTGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: ACWESSGLSKFPTGPVCKRVECS*LNTCLA
Trigger: AGCAAGACAAGTGTTAAGCCAGGAACATTCTACTCT...CTTACAGACTGGTCCAGTAGGGAATTTACTTAAGCCTGAACTTTCCCAGCATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
3UTR-3UTR GCA 90 bp GCATGCTGGGAAAGTTCAGGCTTAAGTAAATTCCCTACTGGACCAGTCTGTAAGTTCAGTATACAGGAATaGCATAAACATCAGACTGGA +
Preference number: 2 (lower is better)
Translates to: ACWESSGLSKFPTGPVCKFSIQE*HKHQTG
Trigger: TCCAGTCTGATGTTTATGGCATTCCTGTATACTGAA...CTTACAGACTGGTCCAGTAGGGAATTTACTTAAGCCTGAACTTTCCCAGCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
3UTR-3UTR TCA 90 bp CTTGAGTCTAACCTCCTTTACTTTGTTTCCTCTCTGATCCAAGACCTTTACAATTCTTCATCCCCATGTTaGAGAATGAGTACCCTGAAG +
Preference number: 2 (lower is better)
Translates to: LESNLLYFVSSLIQDLYNSSSPC*RMSTLK
Trigger: CTTCAGGGTACTCATTCTTCAACATGGGGATGAAGA...ATTGTAAAGGTCTTGGATCAGAGAGGAAACAAAGTAAAGGAGGTTAGACTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
3UTR-3UTR GCA 90 bp CTTGAGTCTAACCTCCTTTACTTTGTTTCCTCTCTGATCCAAGACCTTTACAATTTATTGTACAGTTTCTaGATGCTGGGAAAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: LESNLLYFVSSLIQDLYNLLYSF*MLGKFR
Trigger: CCTGAACTTTCCCAGCATGCAGAAACTGTACAATAA...ATTGTAAAGGTCTTGGATCAGAGAGGAAACAAAGTAAAGGAGGTTAGACTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
3UTR-3UTR CAA 90 bp AAGTCGAAGATTAGACAGATGTTACATATGATGACTGGGAGAGCAAAGCTATGTTTCTTCATCCCCATGTaGAAGAATGAGTACCCTGAA +
Preference number: 3 (lower is better)
Translates to: KSKIRQMLHMMTGRAKLCFFIPM*KNEYPE
Trigger: TTCAGGGTACTCATTCTTCAACATGGGGATGAAGAA...ACATAGCTTTGCTCTCCCAGTCATCATATGTAACATCTGTCTAATCTTCGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
3UTR TCA 72 bp TCCTTGAGTCTAACCTCCTTTACTTTGTTTCCTCTCTaGTCCAAGACCTTTACAATTTGTAACCAATCCCTT +
Preference number: 3 (lower is better)
Translates to: SLSLTSFTLFPL*SKTFTICNQSL
Trigger: AAGGGATTGGTTACAAATTGTAAAGGTCTTGGATCAGAGAGGAAACAAAGTAAAGGAGGTTAGACTCAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
3UTR GCA 72 bp CTAGTTTTGACCTTTCCCATGTTCAGTATACAGGAATaGCATAAACATCAGACTGGAGAAAAGTCGAAGATT +
Preference number: 3 (lower is better)
Translates to: LVLTFPMFSIQE*HKHQTGEKSKI
Trigger: AATCTTCGACTTTTCTCCAGTCTGATGTTTATGGCATTCCTGTATACTGAACATGGGAAAGGTCAAAACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
3UTR-3UTR CAA 90 bp CTTGAGTCTAACCTCCTTTACTTTGTTTCCTCTCTGATCCAAGACCTTTACAATAAACAAACTCCACCATaGAATAGTAATGAGACTGGA +
Preference number: 3 (lower is better)
Translates to: LESNLLYFVSSLIQDLYNKQTPP*NSNETG
Trigger: TCCAGTCTCATTACTATTCAATGGTGGAGTTTGTTT...ATTGTAAAGGTCTTGGATCAGAGAGGAAACAAAGTAAAGGAGGTTAGACTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
3UTR TCA 72 bp CAAAGCTATGTTCACTATGGTGTTTCAGTTTTAAAGTaGCAGGTTATATCATTCGTGTCTGCTAATCCTCAT +
Preference number: 3 (lower is better)
Translates to: QSYVHYGVSVLK*QVISFVSANPH
Trigger: ATGAGGATTAGCAGACACGAATGATATAACCTGTCACTTTAAAACTGAAACACCATAGTGAACATAGCTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
CDS-3UTR CCA 90 bp GCATGCTGGGAAAGTTCAGGCTTAAGTAAATTCCCTACTGGACCAGTCTGTAAGGACCCCAGGGCCAGCTaGACACACAAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ACWESSGLSKFPTGPVCKDPRAS*THKCQL
Trigger: GAGCTGGCACTTGTGTGTCCAGCTGGCCCTGGGGTC...CTTACAGACTGGTCCAGTAGGGAATTTACTTAAGCCTGAACTTTCCCAGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
CDS-3UTR TCA 90 bp GCATGCTGGGAAAGTTCAGGCTTAAGTAAATTCCCTACTGGACCAGTCTGTAAGTGGGACACAAGTAGATaGGGCTTCCACATCCATACT +
Preference number: 4 (lower is better)
Translates to: ACWESSGLSKFPTGPVCKWDTSR*GFHIHT
Trigger: AGTATGGATGTGGAAGCCTCATCTACTTGTGTCCCA...CTTACAGACTGGTCCAGTAGGGAATTTACTTAAGCCTGAACTTTCCCAGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
CDS-3UTR CCA 90 bp CTTGAGTCTAACCTCCTTTACTTTGTTTCCTCTCTGATCCAAGACCTTTACAATGCACCTCAGGGAGTTTaGAGAAGGGGCGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: LESNLLYFVSSLIQDLYNAPQGV*RRGGSG
Trigger: TCCACTTCCGCCCCTTCTCCAAACTCCCTGAGGTGC...ATTGTAAAGGTCTTGGATCAGAGAGGAAACAAAGTAAAGGAGGTTAGACTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
CDS-3UTR CCA 90 bp CTTGAGTCTAACCTCCTTTACTTTGTTTCCTCTCTGATCCAAGACCTTTACAATCCACAGTCCTCTCTGTaGACAGGATGCTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LESNLLYFVSSLIQDLYNPQSSL*TGCWPE
Trigger: CTCTGGCCAGCATCCTGTCCACAGAGAGGACTGTGG...ATTGTAAAGGTCTTGGATCAGAGAGGAAACAAAGTAAAGGAGGTTAGACTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
CDS-3UTR CCA 90 bp AAGTCGAAGATTAGACAGATGTTACATATGATGACTGGGAGAGCAAAGCTATGTGTGGCCTCATGGACATaGGTGTCTGCACATGCCAGT +
Preference number: 4 (lower is better)
Translates to: KSKIRQMLHMMTGRAKLCVASWT*VSAHAS
Trigger: ACTGGCATGTGCAGACACCCATGTCCATGAGGCCAC...ACATAGCTTTGCTCTCCCAGTCATCATATGTAACATCTGTCTAATCTTCGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
CDS-3UTR TCA 90 bp AAGTCGAAGATTAGACAGATGTTACATATGATGACTGGGAGAGCAAAGCTATGTCACATGCCAGTCTCATaGCAGGGAGGACATCACAGT +
Preference number: 4 (lower is better)
Translates to: KSKIRQMLHMMTGRAKLCHMPVS*QGGHHS
Trigger: ACTGTGATGTCCTCCCTGTCATGAGACTGGCATGTG...ACATAGCTTTGCTCTCCCAGTCATCATATGTAACATCTGTCTAATCTTCGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
CDS-3UTR CCA 90 bp CTTGAGTCTAACCTCCTTTACTTTGTTTCCTCTCTGATCCAAGACCTTTACAATAACAGAGTGGCCTCATaGACATGGGTGTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: LESNLLYFVSSLIQDLYNNRVAS*TWVSAH
Trigger: ATGTGCAGACACCCATGTCCATGAGGCCACTCTGTT...ATTGTAAAGGTCTTGGATCAGAGAGGAAACAAAGTAAAGGAGGTTAGACTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
3UTR CAA 72 bp AATGTTCCTGGCTTAACACTTGTCTTGCTGCTAGTTTaGACCTTTCCCATGTTCAGTATACAGGAATGCCAT +
Preference number: 4 (lower is better)
Translates to: NVPGLTLVLLLV*TFPMFSIQECH
Trigger: ATGGCATTCCTGTATACTGAACATGGGAAAGGTCAAAACTAGCAGCAAGACAAGTGTTAAGCCAGGAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
CDS-3UTR TCA 90 bp AAGTCGAAGATTAGACAGATGTTACATATGATGACTGGGAGAGCAAAGCTATGTCACAGTAGAACAAGCTaGTTTCCTTACTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: KSKIRQMLHMMTGRAKLCHSRTS*FPYCYR
Trigger: TCTGTAGCAGTAAGGAAATCAGCTTGTTCTACTGTG...ACATAGCTTTGCTCTCCCAGTCATCATATGTAACATCTGTCTAATCTTCGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
CDS GCA 90 bp TCCTTACTGCTACAGAAAGGCAGTCGGAAGATGAGCACAGTCAACTaGATGGCCAAGATGAAACCCAGCAACAGGGACCCCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SLLLQKGSRKMSTVN*MAKMKPSNRDPRAS
Trigger: GCTGGCCCTGGGGTCCCTGTTGCTGGGTTTCATCTTGGCCATGCAGTTGACTGTGCTCATCTTCCGACTGCCTTTCTGTAGCAGTAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061235.3
ENSMUST00000214887.2
CDS-3UTR CAA 90 bp CTTGAGTCTAACCTCCTTTACTTTGTTTCCTCTCTGATCCAAGACCTTTACAATGTGTGGAGACACCGATaGGTCCAGATGGTGAGGACG +
Preference number: 5 (lower is better)
Translates to: LESNLLYFVSSLIQDLYNVWRHR*VQMVRT
Trigger: CGTCCTCACCATCTGGACCAATCGGTGTCTCCACAC...ATTGTAAAGGTCTTGGATCAGAGAGGAAACAAAGTAAAGGAGGTTAGACTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214887.2
CDS GCA 72 bp CTACAGAAAGGCAGTCGGAAGATGAGCACAGTCAACTaGATGGCCAAGATGAAACCCAGCAACAGGGACCCC +
Preference number: 6 (lower is better)
Translates to: LQKGSRKMSTVN*MAKMKPSNRDP
Trigger: GGGGTCCCTGTTGCTGGGTTTCATCTTGGCCATGCAGTTGACTGTGCTCATCTTCCGACTGCCTTTCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061235.3
ENSMUST00000214887.2
CDS CAA 72 bp AAAAGCACAAAGATCAGCATCTGCACCTCAGGGAGTTaGGAGAAGGGGCGGAAGTGGAAGAGGACCATCCCA +
Preference number: 6 (lower is better)
Translates to: KSTKISICTSGS*EKGRKWKRTIP
Trigger: TGGGATGGTCCTCTTCCACTTCCGCCCCTTCTCCAAACTCCCTGAGGTGCAGATGCTGATCTTTGTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061235.3
ENSMUST00000214887.2