Pregenerated sensors for OLFR1416 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067064Ensembl transcript IDs: ENSMUST00000214928.3
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGGAGAAGAGAAATCACTGCCCGACTCCCTCAAGGCACTGGCTTaGGTGCTTGCTAAAGTCCACTCCTTGCAGACCAGCCTTGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: QGEEKSLPDSLKALA*VLAKVHSLQTSLAK Trigger: CTTAGCAAGGCTGGTCTGCAAGGAGTGGACTTTAGCAAGCACTCAAGCCAGTGCCTTGAGGGAGTCGGGCAGTGATTTCTCTTCTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR GCA 90 bp | GAGAAGAGAAATCACTGCCCGACTCCCTCAAGGCACTGGCTTGAGTaGTTGCTAAAGTCCACTCCTTGCAGACCAGCCTTGCTAAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: EKRNHCPTPSRHWLE*LLKSTPCRPALLSP Trigger: TGGACTTAGCAAGGCTGGTCTGCAAGGAGTGGACTTTAGCAAGCACTCAAGCCAGTGCCTTGAGGGAGTCGGGCAGTGATTTCTCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR GCA 90 bp | TCAGCTGTTTCTACAACGGTGCAAACACAGTCCCATGGCAGGCAGTaGGAGAGCCATTGGCTAGCTGTGGAGAAGCAAATGAACCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: SAVSTTVQTQSHGRQ*ESHWLAVEKQMNLQ Trigger: TTGAAGGTTCATTTGCTTCTCCACAGCTAGCCAATGGCTCTCGCACTGCCTGCCATGGGACTGTGTTTGCACCGTTGTAGAAACAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 90 bp | CAGCAACACCAGACATCTTCCAGTGATGGAAATGTTCTGTTCCCCTaGCTACACTGTGTCCACAACTGTCACAACTGTGCACATTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: QQHQTSSSDGNVLFP*LHCVHNCHNCAHSV Trigger: CACAGAATGTGCACAGTTGTGACAGTTGTGGACACAGTGTAGTCAGGGGAACAGAACATTTCCATCACTGGAAGATGTCTGGTGTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR GCA 90 bp | AATCAGACCATGTTGTTAAGAGAACATAGGATCCTCAGACACAGCTaGTTTAGGACTGATAGCCACAGCCCAGGGAGAAGAGAAATCACT | + |
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Preference number: 1 (lower is better) Translates to: NQTMLLREHRILRHS*FRTDSHSPGRREIT Trigger: AGTGATTTCTCTTCTCCCTGGGCTGTGGCTATCAGTCCTAAAGCAGCTGTGTCTGAGGATCCTATGTTCTCTTAACAACATGGTCTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CCA 90 bp | AACACTAGTGGGAAGACAAGGCCAGGGATACTCGGGACTACTACCTaGCATGCTTCTTTGCAACTTTCTCTTAATATGCCATTATCACTA | + |
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Preference number: 1 (lower is better) Translates to: NTSGKTRPGILGTTT*HASLQLSLNMPLSL Trigger: TAGTGATAATGGCATATTAAGAGAAAGTTGCAAAGAAGCATGCCAGGTAGTAGTCCCGAGTATCCCTGGCCTTGTCTTCCCACTAGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 90 bp | CTGGGAGCTGGTTCCCTGAGTCCACACTCAGAAAGCACATTTGGATaGAGGCTCATTACTGTAGGTAGTTTTACAGGTTTGTTAAATTTC | + |
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Preference number: 1 (lower is better) Translates to: LGAGSLSPHSESTFG*RLITVGSFTGLLNF Trigger: GAAATTTAACAAACCTGTAAAACTACCTACAGTAATGAGCCTTCATCCAAATGTGCTTTCTGAGTGTGGACTCAGGGAACCAGCTCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 90 bp | CAAAGACAGGGAGACGCCCAGACATGGCTGAGCCAAAGCAGAACATaGAACTCTAAGTGCTTCATGATTACATTAATGAAACTCAACACA | + |
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Preference number: 1 (lower is better) Translates to: QRQGDAQTWLSQSRT*NSKCFMITLMKLNT Trigger: TGTGTTGAGTTTCATTAATGTAATCATGAAGCACTTAGAGTTTCATGTTCTGCTTTGGCTCAGCCATGTCTGGGCGTCTCCCTGTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CCA 90 bp | TTGTGTGTTGAAATAAAATTACAGGAAGAACCAGTTAGGTGCTTCTaGAGGACACAGTATGAGGATGTGGGTGTAAGTCAGCAACACCAG | + |
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Preference number: 1 (lower is better) Translates to: LCVEIKLQEEPVRCF*RTQYEDVGVSQQHQ Trigger: CTGGTGTTGCTGACTTACACCCACATCCTCATACTGTGTCCTCCAGAAGCACCTAACTGGTTCTTCCTGTAATTTTATTTCAACACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR GCA 90 bp | TGCAGGAATAGGAACCCTGACGAAGACAGCATCATATATACTATTTaGAAGGGACATTTAACCAAGGTCATCAGAGAGCTAAATCAGACC | + |
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Preference number: 1 (lower is better) Translates to: CRNRNPDEDSIIYTI*KGHLTKVIRELNQT Trigger: GGTCTGATTTAGCTCTCTGATGACCTTGGTTAAATGTCCCTTGCAAATAGTATATATGATGCTGTCTTCGTCAGGGTTCCTATTCCTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 90 bp | AAAGTCAGAGGAGTTACTCTTCTGTTAATGAGCTTTATTATATGTTaGTACAAAGCAAGAACATGTAGTAGTCAGGAGGGCTGTGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: KVRGVTLLLMSFIIC*YKARTCSSQEGCGV Trigger: AACACCACAGCCCTCCTGACTACTACATGTTCTTGCTTTGTATCAACATATAATAAAGCTCATTAACAGAAGAGTAACTCCTCTGACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGGCAGTGCGAGAGCCATTGGCTAGCTGTGGAGAAGCAAATGAACCTTCAGGTGAGAGGGCCCATTaGAGGTGGTGCCATTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: WQAVREPLASCGEANEPSGERAH*RWCHSW Trigger: CCAAGAATGGCACCACCTGCAATGGGCCCTCTCACC...TGAAGGTTCATTTGCTTCTCCACAGCTAGCCAATGGCTCTCGCACTGCCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGTCAATGCCCTGCCACTGAGCTGTACCTTCGTCATGCAGGACAACACTGTAGACAAAAAGAGCTaGCTGGGTGAGGGGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: ARVNALPLSCTFVMQDNTVDKKS*LGEGSS Trigger: ACTGGACCCCTCACCCAGCCAGCTCTTTTTGTCTAC...AGTGTTGTCCTGCATGACGAAGGTACAGCTCAGTGGCAGGGCATTGACTCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGTCAATGCCCTGCCACTGAGCTGTACCTTCGTCATGCAGGACAACACTAGTGACATCCCTCCATaGCCTCTACATCAGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: ARVNALPLSCTFVMQDNTSDIPP*PLHQLL Trigger: CAGGAGCTGATGTAGAGGCCATGGAGGGATGTCACT...AGTGTTGTCCTGCATGACGAAGGTACAGCTCAGTGGCAGGGCATTGACTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CCA 90 bp | GAAATAGTCCAGGGTTGGGCATGGTGGCTGGCACACTCCAAAAGTCAAGTGATGAGGGCCCATTGCAGGTaGTGCCATTCTTGGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: EIVQGWAWWLAHSKSQVMRAHCR*CHSWAG Trigger: ACCAGCCCAAGAATGGCACCACCTGCAATGGGCCCT...CATCACTTGACTTTTGGAGTGTGCCAGCCACCATGCCCAACCCTGGACTATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 90 bp | AAGAGAAATCACTGCCCGACTCCCTCAAGGCACTGGCTTGAGTGCTaGCTAAAGTCCACTCCTTGCAGACCAGCCTTGCTAAGTCCACTC | + |
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Preference number: 2 (lower is better) Translates to: KRNHCPTPSRHWLEC*LKSTPCRPALLSPL Trigger: GAGTGGACTTAGCAAGGCTGGTCTGCAAGGAGTGGACTTTAGCAAGCACTCAAGCCAGTGCCTTGAGGGAGTCGGGCAGTGATTTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTACAACGGTGCAAACACAGTCCCATGGCAGGCAGTGCGAGAGCCATTGGCTGAAAGGAGCTTCCCTTaGGGAAATGCCTCCATGAGA | + |
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Preference number: 2 (lower is better) Translates to: FYNGANTVPWQAVREPLAERSFP*GNASMR Trigger: TCTCATGGAGGCATTTCCTCAAGGGAAGCTCCTTTC...AGCCAATGGCTCTCGCACTGCCTGCCATGGGACTGTGTTTGCACCGTTGTAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR TCA 90 bp | AATGTTCTCAGCTGTTTCTACAACGGTGCAAACACAGTCCCATGGCAGGCAGTGTGGGAGCTGGTTCCCTaGGTCCACACTCAGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: NVLSCFYNGANTVPWQAVWELVP*VHTQKA Trigger: TGCTTTCTGAGTGTGGACTCAGGGAACCAGCTCCCA...CACTGCCTGCCATGGGACTGTGTTTGCACCGTTGTAGAAACAGCTGAGAACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR TCA 90 bp | GAAATAGTCCAGGGTTGGGCATGGTGGCTGGCACACTCCAAAAGTCAAGTGATGCTCAAGGCACTGGCTTaGGTGCTTGCTAAAGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: EIVQGWAWWLAHSKSQVMLKALA*VLAKVH Trigger: GTGGACTTTAGCAAGCACTCAAGCCAGTGCCTTGAG...CATCACTTGACTTTTGGAGTGTGCCAGCCACCATGCCCAACCCTGGACTATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR GCA 90 bp | TTCTACAACGGTGCAAACACAGTCCCATGGCAGGCAGTGCGAGAGCCATTGGCTCTAAAGTCCACTCCTTaGAGACCAGCCTTGCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: FYNGANTVPWQAVREPLALKSTP*RPALLS Trigger: ACTTAGCAAGGCTGGTCTGCAAGGAGTGGACTTTAG...AGCCAATGGCTCTCGCACTGCCTGCCATGGGACTGTGTTTGCACCGTTGTAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGGCAGTGCGAGAGCCATTGGCTAGCTGTGGAGAAGCAAATGAACCTTCATGGAACTTGAACAAGTaGAGCAGGGTGTGCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: WQAVREPLASCGEANEPSWNLNK*SRVCQS Trigger: ACTCTGGCACACCCTGCTGCACTTGTTCAAGTTCCA...TGAAGGTTCATTTGCTTCTCCACAGCTAGCCAATGGCTCTCGCACTGCCTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR TCA 90 bp | GAAATAGTCCAGGGTTGGGCATGGTGGCTGGCACACTCCAAAAGTCAAGTGATGGAGGAAATGCCTCCATaGGATCCAGCTGTAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: EIVQGWAWWLAHSKSQVMEEMPP*DPAVRH Trigger: ATGCCTTACAGCTGGATCTCATGGAGGCATTTCCTC...CATCACTTGACTTTTGGAGTGTGCCAGCCACCATGCCCAACCCTGGACTATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 90 bp | TACAACGGTGCAAACACAGTCCCATGGCAGGCAGTGCGAGAGCCATaGGCTAGCTGTGGAGAAGCAAATGAACCTTCAATAACCTTACCA | + |
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Preference number: 2 (lower is better) Translates to: YNGANTVPWQAVREP*ASCGEANEPSITLP Trigger: TGGTAAGGTTATTGAAGGTTCATTTGCTTCTCCACAGCTAGCCAATGGCTCTCGCACTGCCTGCCATGGGACTGTGTTTGCACCGTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTCCATGGCCTCTACATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTTGAAACATAATGTTTaGGACCACTGGGATACCACC | + |
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Preference number: 2 (lower is better) Translates to: IPPWPLHQLLLPDLLEFQLKHNV*DHWDTT Trigger: GGTGGTATCCCAGTGGTCCCAAACATTATGTTTCAA...CTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGTAGAGGCCATGGAGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGGCAGTGCGAGAGCCATTGGCTAGCTGTGGAGAAGCAAATGAACCTTCAACAGGGAGAGACTATTaGTGTCAGCAGAAAACCATT | + |
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Preference number: 2 (lower is better) Translates to: WQAVREPLASCGEANEPSTGRDY*CQQKTI Trigger: AATGGTTTTCTGCTGACATCAATAGTCTCTCCCTGT...TGAAGGTTCATTTGCTTCTCCACAGCTAGCCAATGGCTCTCGCACTGCCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTATGAGGATGTGGGTGTAAGTCAGCAACACCAGACATCTTCCAGTGATGGAAGGCACTGGCTTGAGTaGTTGCTAAAGTCCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: QYEDVGVSQQHQTSSSDGRHWLE*LLKSTP Trigger: AGGAGTGGACTTTAGCAAGCACTCAAGCCAGTGCCT...TCCATCACTGGAAGATGTCTGGTGTTGCTGACTTACACCCACATCCTCATACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTATGAGGATGTGGGTGTAAGTCAGCAACACCAGACATCTTCCAGTGATGGACTTCCCTTGAGGAAATaGCTCCATGAGATCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: QYEDVGVSQQHQTSSSDGLPLRK*LHEIQL Trigger: CAGCTGGATCTCATGGAGGCATTTCCTCAAGGGAAG...TCCATCACTGGAAGATGTCTGGTGTTGCTGACTTACACCCACATCCTCATACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR TCA 90 bp | GAAATAGTCCAGGGTTGGGCATGGTGGCTGGCACACTCCAAAAGTCAAGTGATGGAAAGCACATTTGGATaGAGGCTCATTACTGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: EIVQGWAWWLAHSKSQVMESTFG*RLITVG Trigger: ACCTACAGTAATGAGCCTTCATCCAAATGTGCTTTC...CATCACTTGACTTTTGGAGTGTGCCAGCCACCATGCCCAACCCTGGACTATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTACAACGGTGCAAACACAGTCCCATGGCAGGCAGTGCGAGAGCCATTGGCTCAAAGAACTGCATGCTaGTGTACATGTGAATATAAC | + |
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Preference number: 2 (lower is better) Translates to: FYNGANTVPWQAVREPLAQRTAC*CTCEYN Trigger: GTTATATTCACATGTACATCAGCATGCAGTTCTTTG...AGCCAATGGCTCTCGCACTGCCTGCCATGGGACTGTGTTTGCACCGTTGTAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTATGAGGATGTGGGTGTAAGTCAGCAACACCAGACATCTTCCAGTGATGGACCTGTTTCTTGGTCATaGTGTTTGTGCAGGAATAGG | + |
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Preference number: 2 (lower is better) Translates to: QYEDVGVSQQHQTSSSDGPVSWS*CLCRNR Trigger: CCTATTCCTGCACAAACATCATGACCAAGAAACAGG...TCCATCACTGGAAGATGTCTGGTGTTGCTGACTTACACCCACATCCTCATACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR GCA 90 bp | AATGTTCTCAGCTGTTTCTACAACGGTGCAAACACAGTCCCATGGCAGGCAGTGGACTACTACCTGGCATaGTTCTTTGCAACTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: NVLSCFYNGANTVPWQAVDYYLA*FFATFS Trigger: AGAGAAAGTTGCAAAGAAGCATGCCAGGTAGTAGTC...CACTGCCTGCCATGGGACTGTGTTTGCACCGTTGTAGAAACAGCTGAGAACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CCA 90 bp | GAAATAGTCCAGGGTTGGGCATGGTGGCTGGCACACTCCAAAAGTCAAGTGATGCCAAGAAATAATGCATaGATTGCTACATGCAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: EIVQGWAWWLAHSKSQVMPRNNA*IATCKD Trigger: GTCTTTGCATGTAGCAATCCATGCATTATTTCTTGG...CATCACTTGACTTTTGGAGTGTGCCAGCCACCATGCCCAACCCTGGACTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 90 bp | TTAAGTCAGAGTGAGATACCTTTGGAGTCCAGAAGAAAGGCTGAATaGAAACATAATGTTTGGGACCACTGGGATACCACCAACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LSQSEIPLESRRKAE*KHNVWDHWDTTNRS Trigger: GCTCCTGTTGGTGGTATCCCAGTGGTCCCAAACATTATGTTTCAATTCAGCCTTTCTTCTGGACTCCAAAGGTATCTCACTCTGACTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTATATCCAAATGGACAGGGAGAGACTATTGATGTCAGCAGAAAACCATTTGGCATGGATTGCTACATaGAAAGACAGGGAGACGCCC | + |
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Preference number: 2 (lower is better) Translates to: VYIQMDRERLLMSAENHLAWIAT*KDRETP Trigger: GGGCGTCTCCCTGTCTTTGCATGTAGCAATCCATGC...CAAATGGTTTTCTGCTGACATCAATAGTCTCTCCCTGTCCATTTGGATATAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTATGAGGATGTGGGTGTAAGTCAGCAACACCAGACATCTTCCAGTGATGGACAACAGGAGCTAAACTaGCACATGCAATTTGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: QYEDVGVSQQHQTSSSDGQQELN*HMQFEK Trigger: TTTTTCAAATTGCATGTGCCAGTTTAGCTCCTGTTG...TCCATCACTGGAAGATGTCTGGTGTTGCTGACTTACACCCACATCCTCATACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 90 bp | AAGGGACATTTAACCAAGGTCATCAGAGAGCTAAATCAGACCATGTaGTTAAGAGAACATAGGATCCTCAGACACAGCTGCTTTAGGACT | + |
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Preference number: 2 (lower is better) Translates to: KGHLTKVIRELNQTM*LREHRILRHSCFRT Trigger: AGTCCTAAAGCAGCTGTGTCTGAGGATCCTATGTTCTCTTAACAACATGGTCTGATTTAGCTCTCTGATGACCTTGGTTAAATGTCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 90 bp | ATGGACAGGGAGAGACTATTGATGTCAGCAGAAAACCATTTGCATTaGGAAAATGCAGATTTAAGTCAGAGTGAGATACCTTTGGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: MDRERLLMSAENHLH*ENADLSQSEIPLES Trigger: GGACTCCAAAGGTATCTCACTCTGACTTAAATCTGCATTTTCCAAATGCAAATGGTTTTCTGCTGACATCAATAGTCTCTCCCTGTCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 90 bp | ATCCAAATGGACAGGGAGAGACTATTGATGTCAGCAGAAAACCATTaGCATTTGGAAAATGCAGATTTAAGTCAGAGTGAGATACCTTTG | + |
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Preference number: 2 (lower is better) Translates to: IQMDRERLLMSAENH*HLENADLSQSEIPL Trigger: CAAAGGTATCTCACTCTGACTTAAATCTGCATTTTCCAAATGCAAATGGTTTTCTGCTGACATCAATAGTCTCTCCCTGTCCATTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 90 bp | CATTTGCATTTGGAAAATGCAGATTTAAGTCAGAGTGAGATACCTTaGGAGTCCAGAAGAAAGGCTGAATTGAAACATAATGTTTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: HLHLENADLSQSEIP*ESRRKAELKHNVWD Trigger: GTCCCAAACATTATGTTTCAATTCAGCCTTTCTTCTGGACTCCAAAGGTATCTCACTCTGACTTAAATCTGCATTTTCCAAATGCAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 90 bp | GATGTTCATCAGAGAGTTTATATCCAAATGGACAGGGAGAGACTATaGATGTCAGCAGAAAACCATTTGCATTTGGAAAATGCAGATTTA | + |
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Preference number: 2 (lower is better) Translates to: DVHQRVYIQMDRERL*MSAENHLHLENADL Trigger: TAAATCTGCATTTTCCAAATGCAAATGGTTTTCTGCTGACATCAATAGTCTCTCCCTGTCCATTTGGATATAAACTCTCTGATGAACATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | GTGCAGCAGGGTGTGCCAGAGTCAATGCCCTGCCACTaGGCTGTACCTTCGTCATGCAGGACAACACTAGTG | + |
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Preference number: 3 (lower is better) Translates to: VQQGVPESMPCH*AVPSSCRTTLV Trigger: CACTAGTGTTGTCCTGCATGACGAAGGTACAGCTCAGTGGCAGGGCATTGACTCTGGCACACCCTGCTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR GCA 72 bp | AGGCACTGGCTTGAGTGCTTGCTAAAGTCCACTCCTTaGAGACCAGCCTTGCTAAGTCCACTCCTGGACGTG | + |
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Preference number: 3 (lower is better) Translates to: RHWLECLLKSTP*RPALLSPLLDV Trigger: CACGTCCAGGAGTGGACTTAGCAAGGCTGGTCTGCAAGGAGTGGACTTTAGCAAGCACTCAAGCCAGTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR GCA 72 bp | AATCACTGCCCGACTCCCTCAAGGCACTGGCTTGAGTaGTTGCTAAAGTCCACTCCTTGCAGACCAGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: NHCPTPSRHWLE*LLKSTPCRPAL Trigger: CAAGGCTGGTCTGCAAGGAGTGGACTTTAGCAAGCACTCAAGCCAGTGCCTTGAGGGAGTCGGGCAGTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR GCA 72 bp | TCTACAACGGTGCAAACACAGTCCCATGGCAGGCAGTaGGAGAGCCATTGGCTAGCTGTGGAGAAGCAAATG | + |
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Preference number: 3 (lower is better) Translates to: STTVQTQSHGRQ*ESHWLAVEKQM Trigger: CATTTGCTTCTCCACAGCTAGCCAATGGCTCTCGCACTGCCTGCCATGGGACTGTGTTTGCACCGTTGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CAA 90 bp | ATCCCTCCATGGCCTCTACATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGGGCAACACACACACCTaGTGCTGCAGTAGTTACACA | + |
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Preference number: 3 (lower is better) Translates to: IPPWPLHQLLLPDLLEFQGNTHT*CCSSYT Trigger: TGTGTAACTACTGCAGCACAAGGTGTGTGTGTTGCC...CTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGTAGAGGCCATGGAGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CCA 72 bp | CCCAGGAAAAGCAAACCAGTAAGTGACATCCCTCCATaGCCTCTACATCAGCTCCTGCTTCCTGACCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: PRKSKPVSDIPP*PLHQLLLPDLL Trigger: AAGCAGGTCAGGAAGCAGGAGCTGATGTAGAGGCCATGGAGGGATGTCACTTACTGGTTTGCTTTTCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | CAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTaGCTTCCTTTGGTGATAAACAGCAGTGTGGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QLLLPDLLEFQS*LPLVINSSVEV Trigger: CACTTCCACACTGCTGTTTATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR GCA 72 bp | TTTTCTCAATTAGTGATCAAGGGTGAGAGGGCCCATTaGAGGTGGTGCCATTCTTGGGCTGGTAGTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FSQLVIKGERAH*RWCHSWAGSLG Trigger: CCCAAGACTACCAGCCCAAGAATGGCACCACCTGCAATGGGCCCTCTCACCCTTGATCACTAATTGAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR GCA 72 bp | AATCAGCACAAATGTTCTCAGCTGTTTCTACAACGGTaGAAACACAGTCCCATGGCAGGCAGTGCGAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NQHKCSQLFLQR*KHSPMAGSARA Trigger: GGCTCTCGCACTGCCTGCCATGGGACTGTGTTTGCACCGTTGTAGAAACAGCTGAGAACATTTGTGCTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CCA 72 bp | CAATTAGTGATCAAGGGTGAGAGGGCCCATTGCAGGTaGTGCCATTCTTGGGCTGGTAGTCTTGGGTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: QLVIKGERAHCR*CHSWAGSLGFY Trigger: ATAGAACCCAAGACTACCAGCCCAAGAATGGCACCACCTGCAATGGGCCCTCTCACCCTTGATCACTAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CAA 90 bp | TGGCAGGCAGTGCGAGAGCCATTGGCTAGCTGTGGAGAAGCAAATGAACCTTCAGAAATAATGCATGGATaGCTACATGCAAAGACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: WQAVREPLASCGEANEPSEIMHG*LHAKTG Trigger: CCCTGTCTTTGCATGTAGCAATCCATGCATTATTTC...TGAAGGTTCATTTGCTTCTCCACAGCTAGCCAATGGCTCTCGCACTGCCTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CCA 72 bp | GGTCTATCTGGCTCCCAACGAGTAGACAAAAAGAGCTaGCTGGGTGAGGGGTCCAGTGATTTGATTTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: GLSGSQRVDKKS*LGEGSSDLIYE Trigger: TTCATAAATCAAATCACTGGACCCCTCACCCAGCCAGCTCTTTTTGTCTACTCGTTGGGAGCCAGATAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CAA 90 bp | TTCTACAACGGTGCAAACACAGTCCCATGGCAGGCAGTGCGAGAGCCATTGGCTACTGGCACATGCAATTaGAAAAACAGTTGTGTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: FYNGANTVPWQAVREPLATGTCN*KNSCVV Trigger: AACTACACAACTGTTTTTCAAATTGCATGTGCCAGT...AGCCAATGGCTCTCGCACTGCCTGCCATGGGACTGTGTTTGCACCGTTGTAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CAA 90 bp | AATGTTCTCAGCTGTTTCTACAACGGTGCAAACACAGTCCCATGGCAGGCAGTGGAACTAATGTTCTCTTaGGTCTTTCATGAGAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: NVLSCFYNGANTVPWQAVELMFS*VFHESL Trigger: GAGGCTCTCATGAAAGACCAAAGAGAACATTAGTTC...CACTGCCTGCCATGGGACTGTGTTTGCACCGTTGTAGAAACAGCTGAGAACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CAA 90 bp | TGGCAGGCAGTGCGAGAGCCATTGGCTAGCTGTGGAGAAGCAAATGAACCTTCAGACATTATTAAGAGGTaGAAAAGACTAACTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WQAVREPLASCGEANEPSDIIKR*KRLTAG Trigger: ACCTGCAGTTAGTCTTTTCAACCTCTTAATAATGTC...TGAAGGTTCATTTGCTTCTCCACAGCTAGCCAATGGCTCTCGCACTGCCTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | ACAAACAGGAGTTATCACAGAGAAAGGAGCTTCCCTTaGGGAAATGCCTCCATGAGATCCAGCTGTAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TNRSYHRERSFP*GNASMRSSCKA Trigger: TGCCTTACAGCTGGATCTCATGGAGGCATTTCCTCAAGGGAAGCTCCTTTCTCTGTGATAACTCCTGTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | CAGACATCTTCCAGTGATGGAAATGTTCTGTTCCCCTaGCTACACTGTGTCCACAACTGTCACAACTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QTSSSDGNVLFP*LHCVHNCHNCA Trigger: TGCACAGTTGTGACAGTTGTGGACACAGTGTAGTCAGGGGAACAGAACATTTCCATCACTGGAAGATGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CAA 90 bp | GAAATAGTCCAGGGTTGGGCATGGTGGCTGGCACACTCCAAAAGTCAAGTGATGAGAAGAAAGGCTGAATaGAAACATAATGTTTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: EIVQGWAWWLAHSKSQVMRRKAE*KHNVWD Trigger: GTCCCAAACATTATGTTTCAATTCAGCCTTTCTTCT...CATCACTTGACTTTTGGAGTGTGCCAGCCACCATGCCCAACCCTGGACTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | AATAAACCCTTTCCTCCCCAACCTGTTTCTTGGTCATaGTGTTTGTGCAGGAATAGGAACCCTGACGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: NKPFPPQPVSWS*CLCRNRNPDED Trigger: GTCTTCGTCAGGGTTCCTATTCCTGCACAAACATCATGACCAAGAAACAGGTTGGGGAGGAAAGGGTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | GGTTCCCTGAGTCCACACTCAGAAAGCACATTTGGATaGAGGCTCATTACTGTAGGTAGTTTTACAGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSLSPHSESTFG*RLITVGSFTGL Trigger: CAAACCTGTAAAACTACCTACAGTAATGAGCCTTCATCCAAATGTGCTTTCTGAGTGTGGACTCAGGGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | GAACTAATGTTCTCTTTGGTCTTTCATGAGAGCCTCTaGTTGAATCTCTGGTCTATCTGGCTCCCAACGAGT | + |
|
Preference number: 3 (lower is better) Translates to: ELMFSLVFHESL*LNLWSIWLPTS Trigger: ACTCGTTGGGAGCCAGATAGACCAGAGATTCAATCAGAGGCTCTCATGAAAGACCAAAGAGAACATTAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | CGTGGACACAGAACTAATGTTCTCTTTGGTCTTTCATaGGAGCCTCTGATTGAATCTCTGGTCTATCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RGHRTNVLFGLS*EPLIESLVYLA Trigger: AGCCAGATAGACCAGAGATTCAATCAGAGGCTCTCATGAAAGACCAAAGAGAACATTAGTTCTGTGTCCACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | TCCTTTGGTGATAAACAGCAGTGTGGAAGTGTAAGCTaGATAAACCCTTTCCTCCCCAACCTGTTTCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SFGDKQQCGSVS*INPFLPNLFLG Trigger: ACCAAGAAACAGGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACACTGCTGTTTATCACCAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CCA 72 bp | TTGGGACCACTGGGATACCACCAACAGGAGCTAAACTaGCACATGCAATTTGAAAAACAGTTGTGTAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LGPLGYHQQELN*HMQFEKQLCSF Trigger: GAAACTACACAACTGTTTTTCAAATTGCATGTGCCAGTTTAGCTCCTGTTGGTGGTATCCCAGTGGTCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTATGAGGATGTGGGTGTAAGTCAGCAACACCAGACATCTTCCAGTGATGGACAAGCTTTTCTTTTGTaGATGTTGACAAGCAGATTC | + |
|
Preference number: 3 (lower is better) Translates to: QYEDVGVSQQHQTSSSDGQAFLL*MLTSRF Trigger: GAATCTGCTTGTCAACATCAACAAAAGAAAAGCTTG...TCCATCACTGGAAGATGTCTGGTGTTGCTGACTTACACCCACATCCTCATACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | GGAGACGCCCAGACATGGCTGAGCCAAAGCAGAACATaGAACTCTAAGTGCTTCATGATTACATTAATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GDAQTWLSQSRT*NSKCFMITLMK Trigger: TTTCATTAATGTAATCATGAAGCACTTAGAGTTTCATGTTCTGCTTTGGCTCAGCCATGTCTGGGCGTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CCA 72 bp | GAAATAAAATTACAGGAAGAACCAGTTAGGTGCTTCTaGAGGACACAGTATGAGGATGTGGGTGTAAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: EIKLQEEPVRCF*RTQYEDVGVSQ Trigger: CTGACTTACACCCACATCCTCATACTGTGTCCTCCAGAAGCACCTAACTGGTTCTTCCTGTAATTTTATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | CCATATAGCAGCATTACACATCCTAGAGAGTATCCATaGTACTGTCAGCCAATAGCAAAGCAAAGAACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PYSSITHPREYP*YCQPIAKQRTA Trigger: TGCAGTTCTTTGCTTTGCTATTGGCTGACAGTATCATGGATACTCTCTAGGATGTGTAATGCTGCTATATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR GCA 72 bp | AGGAACCCTGACGAAGACAGCATCATATATACTATTTaGAAGGGACATTTAACCAAGGTCATCAGAGAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RNPDEDSIIYTI*KGHLTKVIREL Trigger: TAGCTCTCTGATGACCTTGGTTAAATGTCCCTTGCAAATAGTATATATGATGCTGTCTTCGTCAGGGTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR GCA 72 bp | GTTTCTATTAAACCTGGCAACACACACACCTTGTGCTaGAGTAGTTACACACACATAAGCCTTATATATAGC | + |
|
Preference number: 3 (lower is better) Translates to: VSIKPGNTHTLC*SSYTHISLIYS Trigger: GCTATATATAAGGCTTATGTGTGTGTAACTACTGCAGCACAAGGTGTGTGTGTTGCCAGGTTTAATAGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | AGAGAGTTTATATCCAAATGGACAGGGAGAGACTATTaGTGTCAGCAGAAAACCATTTGCATTTGGAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: REFISKWTGRDY*CQQKTICIWKM Trigger: CATTTTCCAAATGCAAATGGTTTTCTGCTGACATCAATAGTCTCTCCCTGTCCATTTGGATATAAACTCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR TCA 72 bp | GGAGTTACTCTTCTGTTAATGAGCTTTATTATATGTTaGTACAAAGCAAGAACATGTAGTAGTCAGGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GVTLLLMSFIIC*YKARTCSSQEG Trigger: GCCCTCCTGACTACTACATGTTCTTGCTTTGTATCAACATATAATAAAGCTCATTAACAGAAGAGTAACTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 72 bp | CACTGCCCGACTCCCTCAAGGCACTGGCTTGAGTGCTaGCTAAAGTCCACTCCTTGCAGACCAGCCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HCPTPSRHWLEC*LKSTPCRPALL Trigger: TAGCAAGGCTGGTCTGCAAGGAGTGGACTTTAGCAAGCACTCAAGCCAGTGCCTTGAGGGAGTCGGGCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| CDS-3UTR CCA 90 bp | TGTGGCATTAGAAACCAGCATAGCGGTTCTCTTGAGGCAGAGAGGGTCACTGGGGAGAAGGCCACAAGCTaGACACACAGCCCTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CGIRNQHSGSLEAERVTGEKATS*THSPVV Trigger: GACCACAGGGCTGTGTGTCCAGCTTGTGGCCTTCTC...CCCAGTGACCCTCTCTGCCTCAAGAGAACCGCTATGCTGGTTTCTAATGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGAAGAGAAATCACTGCCCGACTCCCTCAAGGCACTGGCTTGAGTGCTGGCCATAGGAGAGAATaGTGGCCAAGAGTGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PGRREITARLPQGTGLSAGHRRE*WPRVGT Trigger: TGTTCCCACTCTTGGCCACCATTCTCTCCTATGGCC...AGCACTCAAGCCAGTGCCTTGAGGGAGTCGGGCAGTGATTTCTCTTCTCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 72 bp | GAGTGCTTGCTAAAGTCCACTCCTTGCAGACCAGCCTaGCTAAGTCCACTCCTGGACGTGGACACAGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: ECLLKSTPCRPA*LSPLLDVDTEL Trigger: TAGTTCTGTGTCCACGTCCAGGAGTGGACTTAGCAAGGCTGGTCTGCAAGGAGTGGACTTTAGCAAGCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 72 bp | GCAAACACAGTCCCATGGCAGGCAGTGCGAGAGCCATaGGCTAGCTGTGGAGAAGCAAATGAACCTTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: ANTVPWQAVREP*ASCGEANEPSI Trigger: TATTGAAGGTTCATTTGCTTCTCCACAGCTAGCCAATGGCTCTCGCACTGCCTGCCATGGGACTGTGTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| CDS-3UTR CCA 90 bp | AATGTTCTCAGCTGTTTCTACAACGGTGCAAACACAGTCCCATGGCAGGCAGTGCATAGGAGAGAATGGTaGCCAAGAGTGGGAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: NVLSCFYNGANTVPWQAVHRREW*PRVGTP Trigger: TGGTGTTCCCACTCTTGGCCACCATTCTCTCCTATG...CACTGCCTGCCATGGGACTGTGTTTGCACCGTTGTAGAAACAGCTGAGAACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 72 bp | CCAGGGATACTCGGGACTACTACCTGGCATGCTTCTTaGCAACTTTCTCTTAATATGCCATTATCACTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGILGTTTWHAS*QLSLNMPLSLG Trigger: TCCTAGTGATAATGGCATATTAAGAGAAAGTTGCAAAGAAGCATGCCAGGTAGTAGTCCCGAGTATCCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 72 bp | TTAACCAAGGTCATCAGAGAGCTAAATCAGACCATGTaGTTAAGAGAACATAGGATCCTCAGACACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTKVIRELNQTM*LREHRILRHSC Trigger: GCAGCTGTGTCTGAGGATCCTATGTTCTCTTAACAACATGGTCTGATTTAGCTCTCTGATGACCTTGGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 72 bp | TGTACATGTGAATATAACCAAGAAATAATGCATGGATaGCTACATGCAAAGACAGGGAGACGCCCAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: CTCEYNQEIMHG*LHAKTGRRPDM Trigger: CATGTCTGGGCGTCTCCCTGTCTTTGCATGTAGCAATCCATGCATTATTTCTTGGTTATATTCACATGTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 72 bp | GACAGGGAGAGACTATTGATGTCAGCAGAAAACCATTaGCATTTGGAAAATGCAGATTTAAGTCAGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DRERLLMSAENH*HLENADLSQSE Trigger: CTCACTCTGACTTAAATCTGCATTTTCCAAATGCAAATGGTTTTCTGCTGACATCAATAGTCTCTCCCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 72 bp | CAGAGAGTTTATATCCAAATGGACAGGGAGAGACTATaGATGTCAGCAGAAAACCATTTGCATTTGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QRVYIQMDRERL*MSAENHLHLEN Trigger: ATTTTCCAAATGCAAATGGTTTTCTGCTGACATCAATAGTCTCTCCCTGTCCATTTGGATATAAACTCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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| 3UTR CAA 72 bp | TTGGAAAATGCAGATTTAAGTCAGAGTGAGATACCTTaGGAGTCCAGAAGAAAGGCTGAATTGAAACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LENADLSQSEIP*ESRRKAELKHN Trigger: ATTATGTTTCAATTCAGCCTTTCTTCTGGACTCCAAAGGTATCTCACTCTGACTTAAATCTGCATTTTCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214928.3 |
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