RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1413 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058904

Ensembl transcript IDs: ENSMUST00000074859.3, ENSMUST00000214239.2

Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp ATCATGTTCACTGCAACACACATTGAAAAGTGGCTTTaGACTTTCTCTCCCCCTCAACAGATCAGCACTATG +
Preference number: 3 (lower is better)
Translates to: IMFTATHIEKWL*TFSPPQQISTM
Trigger: CATAGTGCTGATCTGTTGAGGGGGAGAGAAAGTTCAAAGCCACTTTTCAATGTGTGTTGCAGTGAACATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR GCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATGTGGAGAAGACCTTGTaGCGCCCTGACCCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHVEKTL*RPDPER
Trigger: GCGCTCAGGGTCAGGGCGGCACAAGGTCTTCTCCAC...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR CCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATGCAAAGAGCAGAGCCTaGGTCTTTGCACCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHAKSRA*VFAPPP
Trigger: TGGGGGAGGTGCAAAGACCCAGGCTCTGCTCTTTGC...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR CCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATGGCTGGTCTGCACAATaGAGTTCAGGCAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHGWSAQ*SSGSHH
Trigger: GTGGTGGCTGCCTGAACTCCATTGTGCAGACCAGCC...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR CCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATTCAGCACAGGCCAGCTaGAGCAATGGGGGCACATCA +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHSAQAS*SNGGTS
Trigger: TGATGTGCCCCCATTGCTCCAGCTGGCCTGTGCTGA...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR CCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATCTTTCCCCTGCTCCATaGATGTCAGAGCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHLSPAP*MSEHLA
Trigger: AGCCAGGTGCTCTGACATCCATGGAGCAGGGGAAAG...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR TCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATCTGCAAGGACACTGCTaGGAGGCTTCCATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHLQGHC*EASISV
Trigger: CACAGAAATGGAAGCCTCTCAGCAGTGTCCTTGCAG...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR TCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATCACAGCTGTCATGTGTaGACCACAGGTGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHHSCHV*TTGGED
Trigger: GTCTTCTCCACCTGTGGTTCACACATGACAGCTGTG...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR GCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATGAGACCACTTTCCCCTaGTCCATGGATGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHETTFP*SMDVRA
Trigger: TGCTCTGACATCCATGGAGCAGGGGAAAGTGGTCTC...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR TCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATTGGCTTTGGGAGCAATaGCAGAGGAGTAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHWLWEQ*QRSSRS
Trigger: ACTTCTGCTACTCCTCTGTCATTGCTCCCAAAGCCA...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR TCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATGTCAGAGCACCTGGCTaGGCATACATGACAAACACA +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHVRAPG*AYMTNT
Trigger: TGTGTTTGTCATGTATGCTCAGCCAGGTGCTCTGAC...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR TCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATGAGAAAAAGAAGAACTaGGTGGCACATCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHEKKKN*VAHPAK
Trigger: CTTTGCAGGATGTGCCACTCAGTTCTTCTTTTTCTC...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR TCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATCTGGCTGAGCATACATaGCAAACACAGTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHLAEHT*QTQFHK
Trigger: TTTATGGAACTGTGTTTGTCATGTATGCTCAGCCAG...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR CCA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATAAGAAGAGAGAAAGATaGTCATGGCTTTGGGAGCAA +
Preference number: 4 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHKKRER*SWLWEQ
Trigger: TTGCTCCCAAAGCCATGACCATCTTTCTCTCTTCTT...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS CCA 90 bp ACGGTCACTACATACAGGGTCAGGAACACGGCAAAGAGCAGAGCCTaGGTCTTTGCACCTCCCCCAAATCCCACCAACACAAACCCCTGC +
Preference number: 5 (lower is better)
Translates to: TVTTYRVRNTAKSRA*VFAPPPNPTNTNPC
Trigger: GCAGGGGTTTGTGTTGGTGGGATTTGGGGGAGGTGCAAAGACCCAGGCTCTGCTCTTTGCCGTGTTCCTGACCCTGTATGTAGTGACCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074859.3
ENSMUST00000214239.2
CDS GCA 90 bp GCCTGGGTCTTTGCACCTCCCCCAAATCCCACCAACACAAACCCCTaGAAGGACACTGCTGAGAGGCTTCCATTTCTGTGCACTTGTGTG +
Preference number: 5 (lower is better)
Translates to: AWVFAPPPNPTNTNP*KDTAERLPFLCTCV
Trigger: CACACAAGTGCACAGAAATGGAAGCCTCTCAGCAGTGTCCTTGCAGGGGTTTGTGTTGGTGGGATTTGGGGGAGGTGCAAAGACCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074859.3
ENSMUST00000214239.2
CDS-3UTR CAA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATCAGGTGGAGAAGACCTaGTGCCGCCCTGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHQVEKT*CRPDPE
Trigger: CTCAGGGTCAGGGCGGCACAAGGTCTTCTCCACCTG...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR CAA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATGCAGAGCCTGGGTCTTaGCACCTCCCCCAAATCCCA +
Preference number: 5 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHAEPGS*HLPQIP
Trigger: TGGGATTTGGGGGAGGTGCAAAGACCCAGGCTCTGC...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS-3UTR CAA 90 bp ACCCTAGGAACCATTGCAGGATGGATGAATAGAAGATGTTGTACAGTATTTCATAAGATGGTCATGGCTTaGGGAGCAATGACAGAGGAG +
Preference number: 5 (lower is better)
Translates to: TLGTIAGWMNRRCCTVFHKMVMA*GAMTEE
Trigger: CTCCTCTGTCATTGCTCCCAAAGCCATGACCATCTT...ATGAAATACTGTACAACATCTTCTATTCATCCATCCTGCAATGGTTCCTAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214239.2
CDS CAA 72 bp CGGGCATCCAGGGTGATGACCACGATCATGGTGAGGTaGCCCAGGACGGTCACTACATACAGGGTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: RASRVMTTIMVR*PRTVTTYRVRN
Trigger: GTTCCTGACCCTGTATGTAGTGACCGTCCTGGGCAACCTCACCATGATCGTGGTCATCACCCTGGATGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074859.3
ENSMUST00000214239.2
CDS GCA 72 bp TCTGCACAATGGAGTTCAGGCAGCCACCACAGTATGTaGCCAGGACTAGTCGGGCACATGCCATGGGACACA +
Preference number: 6 (lower is better)
Translates to: SAQWSSGSHHSM*PGLVGHMPWDT
Trigger: TGTGTCCCATGGCATGTGCCCGACTAGTCCTGGGCACATACTGTGGTGGCTGCCTGAACTCCATTGTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074859.3
ENSMUST00000214239.2
CDS TCA 72 bp AAATCCCACCAACACAAACCCCTGCAAGGACACTGCTaGGAGGCTTCCATTTCTGTGCACTTGTGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: KSHQHKPLQGHC*EASISVHLCGH
Trigger: ATGGCCACACAAGTGCACAGAAATGGAAGCCTCTCAGCAGTGTCCTTGCAGGGGTTTGTGTTGGTGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074859.3
ENSMUST00000214239.2
CDS TCA 72 bp GCTCCATGGATGTCAGAGCACCTGGCTGAGCATACATaGCAAACACAGTTCCATAAAACAAGGACACAGCTG +
Preference number: 6 (lower is better)
Translates to: APWMSEHLAEHT*QTQFHKTRTQL
Trigger: CAGCTGTGTCCTTGTTTTATGGAACTGTGTTTGTCATGTATGCTCAGCCAGGTGCTCTGACATCCATGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074859.3
ENSMUST00000214239.2