Pregenerated sensors for OLFR1408 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062527Ensembl transcript IDs: ENSMUST00000073663.3, ENSMUST00000200689.5
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCATTGAATTTCAATTCTATAGCCAAACTCCCAGCTATCCTACACTaGTTAGGATTTCTGCCATTTAAACTCCACATCCCTCTTCAGTCT | + |
|
Preference number: 1 (lower is better) Translates to: PLNFNSIAKLPAILH*LGFLPFKLHIPLQS Trigger: AGACTGAAGAGGGATGTGGAGTTTAAATGGCAGAAATCCTAATCAGTGTAGGATAGCTGGGAGTTTGGCTATAGAATTGAAATTCAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR-3UTR CCA 90 bp | ATTATCTTCTGGAGTAGGGCCAATGGCTGTCTATGTACAGGTCTTGGAAGTGACTCAATTATTAGAGCCTaGCTCCCAGCTTCACTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: IIFWSRANGCLCTGLGSDSIIRA*LPASLL Trigger: CAAAAGTGAAGCTGGGAGCCAGGCTCTAATAATTGA...GTCACTTCCAAGACCTGTACATAGACAGCCATTGGCCCTACTCCAGAAGATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR-3UTR CCA 90 bp | CTAAAATCTAATGAAAGCGAGGAGAGAAAGGATTATGTGAAGCAGGAGGGAATGCCAAGTCAACTCCCATaGCACCTCCACTATCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LKSNESEERKDYVKQEGMPSQLP*HLHYQQ Trigger: TTGCTGATAGTGGAGGTGCCATGGGAGTTGACTTGG...CATTCCCTCCTGCTTCACATAATCCTTTCTCTCCTCGCTTTCATTAGATTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR-3UTR TCA 90 bp | CTAAAATCTAATGAAAGCGAGGAGAGAAAGGATTATGTGAAGCAGGAGGGAATGATGACTTGGCTTATGTaGGGAAGAAGGAGGCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LKSNESEERKDYVKQEGMMTWLM*GRRRLS Trigger: ACTGAGCCTCCTTCTTCCTCACATAAGCCAAGTCAT...CATTCCCTCCTGCTTCACATAATCCTTTCTCTCCTCGCTTTCATTAGATTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR-3UTR TCA 90 bp | CTAAAATCTAATGAAAGCGAGGAGAGAAAGGATTATGTGAAGCAGGAGGGAATGCCAGCTATCCTACACTaGTTAGGATTTCTGCCATTT | + |
|
Preference number: 2 (lower is better) Translates to: LKSNESEERKDYVKQEGMPAILH*LGFLPF Trigger: AAATGGCAGAAATCCTAATCAGTGTAGGATAGCTGG...CATTCCCTCCTGCTTCACATAATCCTTTCTCTCCTCGCTTTCATTAGATTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR CAA 90 bp | TCCACTATCAGCAAGTTCCTAAGAAGATTTCCTGACCTTTCCTTCTaGTTCACCAATCTTCACAATTCTCTTCAAACCTCTTCATCAACA | + |
|
Preference number: 2 (lower is better) Translates to: STISKFLRRFPDLSF*FTNLHNSLQTSSST Trigger: TGTTGATGAAGAGGTTTGAAGAGAATTGTGAAGATTGGTGAACAAGAAGGAAAGGTCAGGAAATCTTCTTAGGAACTTGCTGATAGTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR-3UTR CCA 90 bp | CTAAAATCTAATGAAAGCGAGGAGAGAAAGGATTATGTGAAGCAGGAGGGAATGAGTCATGTGTCTTCCTaGAATCTAACAAATGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LKSNESEERKDYVKQEGMSHVSS*NLTNGS Trigger: ACTTCCATTTGTTAGATTCCAGGAAGACACATGACT...CATTCCCTCCTGCTTCACATAATCCTTTCTCTCCTCGCTTTCATTAGATTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR-3UTR CCA 90 bp | CTAAAATCTAATGAAAGCGAGGAGAGAAAGGATTATGTGAAGCAGGAGGGAATGACTTATGTTTCCCTCTaGATAAGAAACTTTGATCAG | + |
|
Preference number: 2 (lower is better) Translates to: LKSNESEERKDYVKQEGMTYVSL*IRNFDQ Trigger: CTGATCAAAGTTTCTTATCCAGAGGGAAACATAAGT...CATTCCCTCCTGCTTCACATAATCCTTTCTCTCCTCGCTTTCATTAGATTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGGAAGGCAGACTTCTGCACCTGCTAAAATCTAATGAAAGCGAGGAGAGACTCTGCCTTGATGACTaGGCTTATGTGAGGAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TGEGRLLHLLKSNESEERLCLDD*AYVRKK Trigger: CTTCTTCCTCACATAAGCCAAGTCATCAAGGCAGAG...TCTCTCCTCGCTTTCATTAGATTTTAGCAGGTGCAGAAGTCTGCCTTCCCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGGAAGGCAGACTTCTGCACCTGCTAAAATCTAATGAAAGCGAGGAGAGACCTGACCTTTCCTTCTaGTTCACCAATCTTCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: TGEGRLLHLLKSNESEERPDLSF*FTNLHN Trigger: ATTGTGAAGATTGGTGAACAAGAAGGAAAGGTCAGG...TCTCTCCTCGCTTTCATTAGATTTTAGCAGGTGCAGAAGTCTGCCTTCCCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGGAAGGCAGACTTCTGCACCTGCTAAAATCTAATGAAAGCGAGGAGAGACAGAAAGGTGTTGTGTaGGTTCATTTCCCACTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TGEGRLLHLLKSNESEERQKGVV*VHFPLN Trigger: ATTTAGTGGGAAATGAACCAACACAACACCTTTCTG...TCTCTCCTCGCTTTCATTAGATTTTAGCAGGTGCAGAAGTCTGCCTTCCCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR TCA 72 bp | ATCACTAATCTACAATACAACGGGACAGTCTCAGACTaGGGGAGGAATGATGGACCTGGAATGGAATCTATC | + |
|
Preference number: 3 (lower is better) Translates to: ITNLQYNGTVSD*GRNDGPGMESI Trigger: GATAGATTCCATTCCAGGTCCATCATTCCTCCCTCAGTCTGAGACTGTCCCGTTGTATTGTAGATTAGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR TCA 72 bp | TTCAATTCTATAGCCAAACTCCCAGCTATCCTACACTaGTTAGGATTTCTGCCATTTAAACTCCACATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FNSIAKLPAILH*LGFLPFKLHIP Trigger: AGGGATGTGGAGTTTAAATGGCAGAAATCCTAATCAGTGTAGGATAGCTGGGAGTTTGGCTATAGAATTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR CCA 72 bp | CCCTACAGTAGGTTTACTGTGAGTCATGTGTCTTCCTaGAATCTAACAAATGGAAGTAGAAATAAGCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: PYSRFTVSHVSS*NLTNGSRNKHD Trigger: GTCATGCTTATTTCTACTTCCATTTGTTAGATTCCAGGAAGACACATGACTCACAGTAAACCTACTGTAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCAATCTTCACAATTCTCTTCAAACCTCTTCATCAACAATACCCTCTTACTTTGTCTATGTACAGGTCTaGGAAGTGACCTGTGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TNLHNSLQTSSSTIPSYFVYVQV*EVTCVF Trigger: AAAAACACAGGTCACTTCCAAGACCTGTACATAGAC...AAAGTAAGAGGGTATTGTTGATGAAGAGGTTTGAAGAGAATTGTGAAGATTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR GCA 72 bp | CTTATCTTACTAAAACACAAGACAGTTAGATTTCTGTaGATATCCTTCCCACTAACCACTTATTCAAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: LILLKHKTVRFL*ISFPLTTYSSI Trigger: GATACTTGAATAAGTGGTTAGTGGGAAGGATATGCACAGAAATCTAACTGTCTTGTGTTTTAGTAAGATAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS-3UTR TCA 90 bp | ATTATCTTCTGGAGTAGGGCCAATGGCTGTCTATGTACAGGTCTTGGAAGTGACATGAAGAGTGTGAGCTaGTGCTCTTGGAAATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IIFWSRANGCLCTGLGSDMKSVS*CSWKLE Trigger: CTCCAATTTCCAAGAGCATCAGCTCACACTCTTCAT...GTCACTTCCAAGACCTGTACATAGACAGCCATTGGCCCTACTCCAGAAGATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS-3UTR TCA 90 bp | CTAAAATCTAATGAAAGCGAGGAGAGAAAGGATTATGTGAAGCAGGAGGGAATGTGCAAAATGGCAGCCTaGATATGGCCAGAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKSNESEERKDYVKQEGMCKMAA*IWPEPG Trigger: TCCAGGCTCTGGCCATATTCAGGCTGCCATTTTGCA...CATTCCCTCCTGCTTCACATAATCCTTTCTCTCCTCGCTTTCATTAGATTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS-3UTR TCA 90 bp | ATTATCTTCTGGAGTAGGGCCAATGGCTGTCTATGTACAGGTCTTGGAAGTGACTTTCCAGCCATCAGATaGGGCAATCTTGAGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: IIFWSRANGCLCTGLGSDFPAIR*GNLENG Trigger: ACCATTCTCAAGATTGCCTCATCTGATGGCTGGAAA...GTCACTTCCAAGACCTGTACATAGACAGCCATTGGCCCTACTCCAGAAGATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS-3UTR TCA 90 bp | CTAAAATCTAATGAAAGCGAGGAGAGAAAGGATTATGTGAAGCAGGAGGGAATGCTGAAGATGCCAGAATaGCACACACCCTCCAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKSNESEERKDYVKQEGMLKMPE*HTPSNS Trigger: TGAATTGGAGGGTGTGTGTCATTCTGGCATCTTCAG...CATTCCCTCCTGCTTCACATAATCCTTTCTCTCCTCGCTTTCATTAGATTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS-3UTR TCA 90 bp | TTACTAAAACACAAGACAGTTAGATTTCTGTGCATATCCTTCCCACTAACCACTCCCTGTGGCACAGACTaGAGATGCCAGAATGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LLKHKTVRFLCISFPLTTPCGTD*RCQNDT Trigger: TGTGTCATTCTGGCATCTTCAGTCTGTGCCACAGGG...AGTGGTTAGTGGGAAGGATATGCACAGAAATCTAACTGTCTTGTGTTTTAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS-3UTR CCA 90 bp | CTAAAATCTAATGAAAGCGAGGAGAGAAAGGATTATGTGAAGCAGGAGGGAATGCAGTGTGTTGCAAAATaGCAGCCTGAATATGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKSNESEERKDYVKQEGMQCVAK*QPEYGQ Trigger: CTGGCCATATTCAGGCTGCCATTTTGCAACACACTG...CATTCCCTCCTGCTTCACATAATCCTTTCTCTCCTCGCTTTCATTAGATTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS-3UTR CCA 90 bp | ACCAATCTTCACAATTCTCTTCAAACCTCTTCATCAACAATACCCTCTTACTTTTCCAAGGAGATGGTTTaGCTCAGACCCACAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TNLHNSLQTSSSTIPSYFSKEMV*LRPTRL Trigger: CAGCCTTGTGGGTCTGAGCCAAACCATCTCCTTGGA...AAAGTAAGAGGGTATTGTTGATGAAGAGGTTTGAAGAGAATTGTGAAGATTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS-3UTR CCA 90 bp | CTAGCTGGTCACAAACAAGATGTAAGATGTAGGCATCATATGAATGAAAGAACAGACTTGATTGATGACTaGCACAGTACAGGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LAGHKQDVRCRHHMNERTDLIDD*HSTGQI Trigger: GATCTGGCCTGTACTGTGCCAGTCATCAATCAAGTC...TGTTCTTTCATTCATATGATGCCTACATCTTACATCTTGTTTGTGACCAGCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS-3UTR CCA 90 bp | ACCAATCTTCACAATTCTCTTCAAACCTCTTCATCAACAATACCCTCTTACTTTGTCACTGAGAGCAGCTaGTCTTGGTCCTTACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TNLHNSLQTSSSTIPSYFVTESS*SWSLLF Trigger: GAACAGTAAGGACCAAGACCAGCTGCTCTCAGTGAC...AAAGTAAGAGGGTATTGTTGATGAAGAGGTTTGAAGAGAATTGTGAAGATTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS-3UTR CCA 90 bp | ACCAATCTTCACAATTCTCTTCAAACCTCTTCATCAACAATACCCTCTTACTTTGAGAGCAGCTGGTCTTaGTCCTTACTGTTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TNLHNSLQTSSSTIPSYFESSWS*SLLFSD Trigger: ATCAGAGAACAGTAAGGACCAAGACCAGCTGCTCTC...AAAGTAAGAGGGTATTGTTGATGAAGAGGTTTGAAGAGAATTGTGAAGATTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| 3UTR CAA 72 bp | AGCAAGTTCCTAAGAAGATTTCCTGACCTTTCCTTCTaGTTCACCAATCTTCACAATTCTCTTCAAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKFLRRFPDLSF*FTNLHNSLQTS Trigger: AGAGGTTTGAAGAGAATTGTGAAGATTGGTGAACAAGAAGGAAAGGTCAGGAAATCTTCTTAGGAACTTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS CCA 90 bp | TTAATCAGTGTGTTGCAAAATGGCAGCCTGAATATGGCCAGAGCCTaGACTAGTGAGAGCAAGAACCCTGTGGCACAGACTGAAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LISVLQNGSLNMARA*TSESKNPVAQTEDA Trigger: GGCATCTTCAGTCTGTGCCACAGGGTTCTTGCTCTCACTAGTCCAGGCTCTGGCCATATTCAGGCTGCCATTTTGCAACACACTGATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073663.3 ENSMUST00000200689.5 |
||
| CDS-3UTR CAA 90 bp | ACTGGGGAAGGCAGACTTCTGCACCTGCTAAAATCTAATGAAAGCGAGGAGAGATGTGAGCTGATGCTCTaGGAAATTGGAGAAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGEGRLLHLLKSNESEERCELML*EIGEAL Trigger: CAAGGCTTCTCCAATTTCCAAGAGCATCAGCTCACA...TCTCTCCTCGCTTTCATTAGATTTTAGCAGGTGCAGAAGTCTGCCTTCCCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS-3UTR CAA 90 bp | CTAAAATCTAATGAAAGCGAGGAGAGAAAGGATTATGTGAAGCAGGAGGGAATGGTCACAATGATGACATaGCCAGTCAGCGTCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LKSNESEERKDYVKQEGMVTMMT*PVSVRI Trigger: TATCCTGACGCTGACTGGCAATGTCATCATTGTGAC...CATTCCCTCCTGCTTCACATAATCCTTTCTCTCCTCGCTTTCATTAGATTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS-3UTR CAA 90 bp | TTACTAAAACACAAGACAGTTAGATTTCTGTGCATATCCTTCCCACTAACCACTTGTTTAATCAGTGTGTaGCAAAATGGCAGCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLKHKTVRFLCISFPLTTCLISV*QNGSLN Trigger: ATTCAGGCTGCCATTTTGCAACACACTGATTAAACA...AGTGGTTAGTGGGAAGGATATGCACAGAAATCTAACTGTCTTGTGTTTTAGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200689.5 |
||
| CDS CCA 72 bp | GTGTTGCAAAATGGCAGCCTGAATATGGCCAGAGCCTaGACTAGTGAGAGCAAGAACCCTGTGGCACAGACT | + |
|
Preference number: 6 (lower is better) Translates to: VLQNGSLNMARA*TSESKNPVAQT Trigger: AGTCTGTGCCACAGGGTTCTTGCTCTCACTAGTCCAGGCTCTGGCCATATTCAGGCTGCCATTTTGCAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073663.3 ENSMUST00000200689.5 |
||