Pregenerated sensors for OLFR1406 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058981Ensembl transcript IDs: ENSMUST00000072395.3, ENSMUST00000201132.3, ENSMUST00000215878.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAAGAAGTCTCATCCAGAAAGAACATTTCGAAATCCATTCTGCTaGTCCTTCTGCTCTTCACCATGTCAACTCCCACTTCAACTCAAC | + |
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Preference number: 1 (lower is better) Translates to: RKKSHPERTFRNPFC*SFCSSPCQLPLQLN Trigger: GTTGAGTTGAAGTGGGAGTTGACATGGTGAAGAGCAGAAGGAGCAGCAGAATGGATTTCGAAATGTTCTTTCTGGATGAGACTTCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR TCA 90 bp | CCACTTCAACTCAACTCTCAGGAAGTTCCCACAGAGATTTCTTCTTaGCCTTCCCTTCTTCTCCGATTTTCAGAATTCTCCAGCAATCTT | + |
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Preference number: 1 (lower is better) Translates to: PLQLNSQEVPTEISS*PSLLLRFSEFSSNL Trigger: AAGATTGCTGGAGAATTCTGAAAATCGGAGAAGAAGGGAAGGTCAAGAAGAAATCTCTGTGGGAACTTCCTGAGAGTTGAGTTGAAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR CCA 90 bp | CTTAGATCCCTTTCATTTGGAATTCTACCTGTGGCAGATAGGAAATaGGAAGCTCTTTTAGAGTTCCATGTGTGGCTGCTTGAAGATAGC | + |
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Preference number: 1 (lower is better) Translates to: LRSLSFGILPVADRK*EALLEFHVWLLEDS Trigger: GCTATCTTCAAGCAGCCACACATGGAACTCTAAAAGAGCTTCCCATTTCCTATCTGCCACAGGTAGAATTCCAAATGAAAGGGATCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR CCA 90 bp | CTCCTCCGGGCCATAATGTATGAGTCTTCTAAACACATAAAACCATaGCTTTATACCTTGCCCTATCAGGTTCCATGTGAAAAAGATGAA | + |
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Preference number: 1 (lower is better) Translates to: LLRAIMYESSKHIKP*LYTLPYQVPCEKDE Trigger: TTCATCTTTTTCACATGGAACCTGATAGGGCAAGGTATAAAGCCATGGTTTTATGTGTTTAGAAGACTCATACATTATGGCCCGGAGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR CCA 90 bp | CTTGAAATGAACATAAGATTCTACTTTAACCTTGTAATTATCTTCTaGAGTAGGGCCAATAGCTGTCTGTGTATGGGTCTTGGAAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: LEMNIRFYFNLVIIF*SRANSCLCMGLGSD Trigger: GTCACTTCCAAGACCCATACACAGACAGCTATTGGCCCTACTCCAGAAGATAATTACAAGGTTAAAGTAGAATCTTATGTTCATTTCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR CAA 90 bp | CCCACTTCAACTCAACTCTCAGGAAGTTCCCACAGAGATTTCTTCTaGACCTTCCCTTCTTCTCCGATTTTCAGAATTCTCCAGCAATCT | + |
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Preference number: 2 (lower is better) Translates to: PTSTQLSGSSHRDFF*TFPSSPIFRILQQS Trigger: AGATTGCTGGAGAATTCTGAAAATCGGAGAAGAAGGGAAGGTCAAGAAGAAATCTCTGTGGGAACTTCCTGAGAGTTGAGTTGAAGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAGGTGTGGTATTGGCTTCCTTTTCCACTAAATTCCTTTTCGCTGCCTTGCATGGCTTTATACCTTaGCCTATCAGGTTCCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: QKGVVLASFSTKFLFAALHGFIP*PIRFHV Trigger: CACATGGAACCTGATAGGGCAAGGTATAAAGCCATG...CAAGGCAGCGAAAAGGAATTTAGTGGAAAAGGAAGCCAATACCACACCTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAAATGGGAAGCTCTTTTAGAGTTCCATGTGTGGCTGCTTGAAGATAGCTGGCTTGTAATTATCTTCTaGAGTAGGGCCAATAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RKWEALLEFHVWLLEDSWLVIIF*SRANSC Trigger: ACAGCTATTGGCCCTACTCCAGAAGATAATTACAAG...CCAGCTATCTTCAAGCAGCCACACATGGAACTCTAAAAGAGCTTCCCATTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAGGTGTGGTATTGGCTTCCTTTTCCACTAAATTCCTTTTCGCTGCCTTGGTGGCAGATAGGAAATaGGAAGCTCTTTTAGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: QKGVVLASFSTKFLFAALVADRK*EALLEF Trigger: GAACTCTAAAAGAGCTTCCCATTTCCTATCTGCCAC...CAAGGCAGCGAAAAGGAATTTAGTGGAAAAGGAAGCCAATACCACACCTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACCTTCCCTTCTTCTCCGATTTTCAGAATTCTCCAGCAATCTTCTTCCCCATTGGAATTCTACCTGTaGCAGATAGGAAATGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LTFPSSPIFRILQQSSSPLEFYL*QIGNGK Trigger: CTTCCCATTTCCTATCTGCCACAGGTAGAATTCCAA...TGGGGAAGAAGATTGCTGGAGAATTCTGAAAATCGGAGAAGAAGGGAAGGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAGGTGTGGTATTGGCTTCCTTTTCCACTAAATTCCTTTTCGCTGCCTTGCTTGTAATTATCTTCTaGAGTAGGGCCAATAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: QKGVVLASFSTKFLFAALLVIIF*SRANSC Trigger: ACAGCTATTGGCCCTACTCCAGAAGATAATTACAAG...CAAGGCAGCGAAAAGGAATTTAGTGGAAAAGGAAGCCAATACCACACCTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGTTCCCACAGAGATTTCTTCTTGACCTTCCCTTCTTCTCCGATTTTCAGAAAGAATTAGACCAATaGCCATTGCATTCAAATGCT | + |
|
Preference number: 2 (lower is better) Translates to: RKFPQRFLLDLPFFSDFQKELDQ*PLHSNA Trigger: AGCATTTGAATGCAATGGCCATTGGTCTAATTCTTT...CTGAAAATCGGAGAAGAAGGGAAGGTCAAGAAGAAATCTCTGTGGGAACTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTTTCCTCCATCAAGAGTACTAGGAGCGCTGAATGACAATCAGATTGAAGGATCTTTCAGAAAGGTGTaGTATTGGCTTCCTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: IFPPSRVLGALNDNQIEGSFRKV*YWLPFP Trigger: TGGAAAAGGAAGCCAATACCACACCTTTCTGAAAGA...TCCTTCAATCTGATTGTCATTCAGCGCTCCTAGTACTCTTGATGGAGGAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTTTCCTCCATCAAGAGTACTAGGAGCGCTGAATGACAATCAGATTGAAGGAAAACACATAAAACCATaGCTTTATACCTTGCCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: IFPPSRVLGALNDNQIEGKHIKP*LYTLPY Trigger: ATAGGGCAAGGTATAAAGCCATGGTTTTATGTGTTT...TCCTTCAATCTGATTGTCATTCAGCGCTCCTAGTACTCTTGATGGAGGAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR CAA 90 bp | TTGACCTTCCCTTCTTCTCCGATTTTCAGAATTCTCCAGCAATCTTCTTCCCCATCCATGTGTGGCTGCTaGAAGATAGCTGGTCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: LTFPSSPIFRILQQSSSPSMCGC*KIAGLA Trigger: TGCCAGACCAGCTATCTTCAAGCAGCCACACATGGA...TGGGGAAGAAGATTGCTGGAGAATTCTGAAAATCGGAGAAGAAGGGAAGGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR CAA 90 bp | ATTTTTCCTCCATCAAGAGTACTAGGAGCGCTGAATGACAATCAGATTGAAGGATCCATGTGTGGCTGCTaGAAGATAGCTGGTCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: IFPPSRVLGALNDNQIEGSMCGC*KIAGLA Trigger: TGCCAGACCAGCTATCTTCAAGCAGCCACACATGGA...TCCTTCAATCTGATTGTCATTCAGCGCTCCTAGTACTCTTGATGGAGGAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR TCA 72 bp | CTCAACTCTCAGGAAGTTCCCACAGAGATTTCTTCTTaGCCTTCCCTTCTTCTCCGATTTTCAGAATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LNSQEVPTEISS*PSLLLRFSEFS Trigger: GGAGAATTCTGAAAATCGGAGAAGAAGGGAAGGTCAAGAAGAAATCTCTGTGGGAACTTCCTGAGAGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR GCA 72 bp | TCTCATCCAGAAAGAACATTTCGAAATCCATTCTGCTaGTCCTTCTGCTCTTCACCATGTCAACTCCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: SHPERTFRNPFC*SFCSSPCQLPL Trigger: AAGTGGGAGTTGACATGGTGAAGAGCAGAAGGAGCAGCAGAATGGATTTCGAAATGTTCTTTCTGGATGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR CCA 72 bp | CTTTCATTTGGAATTCTACCTGTGGCAGATAGGAAATaGGAAGCTCTTTTAGAGTTCCATGTGTGGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LSFGILPVADRK*EALLEFHVWLL Trigger: AAGCAGCCACACATGGAACTCTAAAAGAGCTTCCCATTTCCTATCTGCCACAGGTAGAATTCCAAATGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR CAA 90 bp | ATTTTTCCTCCATCAAGAGTACTAGGAGCGCTGAATGACAATCAGATTGAAGGAGTCTGTGTATGGGTCTaGGAAGTGACTTGTGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IFPPSRVLGALNDNQIEGVCVWV*EVTCEF Trigger: AAACTCACAAGTCACTTCCAAGACCCATACACAGAC...TCCTTCAATCTGATTGTCATTCAGCGCTCCTAGTACTCTTGATGGAGGAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGGGAATCATGTAATTTCTTTCAGAAAGGTGTGGTATTGGCTTCCTTTTCCAGTCTGTGTATGGGTCTaGGAAGTGACTTGTGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IGNHVISFRKVWYWLPFPVCVWV*EVTCEF Trigger: AAACTCACAAGTCACTTCCAAGACCCATACACAGAC...TGGAAAAGGAAGCCAATACCACACCTTTCTGAAAGAAATTACATGATTCCCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR CCA 72 bp | GGGAATCATGTAATTTCTTTCAGAAAGGTGTGGTATTaGCTTCCTTTTCCACTAAATTCCTTTTCGCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: GNHVISFRKVWY*LPFPLNSFSLP Trigger: AGGCAGCGAAAAGGAATTTAGTGGAAAAGGAAGCCAATACCACACCTTTCTGAAAGAAATTACATGATTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGGGAATCATGTAATTTCTTTCAGAAAGGTGTGGTATTGGCTTCCTTTTCCATTAGATCCCTTTCATTaGGAATTCTACCTGTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: IGNHVISFRKVWYWLPFPLDPFH*EFYLWQ Trigger: CTGCCACAGGTAGAATTCCAAATGAAAGGGATCTAA...TGGAAAAGGAAGCCAATACCACACCTTTCTGAAAGAAATTACATGATTCCCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR CCA 72 bp | GCCATAATGTATGAGTCTTCTAAACACATAAAACCATaGCTTTATACCTTGCCCTATCAGGTTCCATGTGAA | + |
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Preference number: 3 (lower is better) Translates to: AIMYESSKHIKP*LYTLPYQVPCE Trigger: TTCACATGGAACCTGATAGGGCAAGGTATAAAGCCATGGTTTTATGTGTTTAGAAGACTCATACATTATGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR CCA 72 bp | AACATAAGATTCTACTTTAACCTTGTAATTATCTTCTaGAGTAGGGCCAATAGCTGTCTGTGTATGGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: NIRFYFNLVIIF*SRANSCLCMGL Trigger: AAGACCCATACACAGACAGCTATTGGCCCTACTCCAGAAGATAATTACAAGGTTAAAGTAGAATCTTATGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR CCA 72 bp | GGTATTGGGAATCATGTAATTTCTTTCAGAAAGGTGTaGTATTGGCTTCCTTTTCCACTAAATTCCTTTTCG | + |
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Preference number: 3 (lower is better) Translates to: GIGNHVISFRKV*YWLPFPLNSFS Trigger: CGAAAAGGAATTTAGTGGAAAAGGAAGCCAATACCACACCTTTCTGAAAGAAATTACATGATTCCCAATACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR CCA 90 bp | ATCTTCTGGAGTAGGGCCAATAGCTGTCTGTGTATGGGTCTTGGAAGTGACTTGTCCAGGGAGATGGTTTaGCTCAGACCTACAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: IFWSRANSCLCMGLGSDLSREMV*LRPTRL Trigger: CAGCCTTGTAGGTCTGAGCCAAACCATCTCCCTGGA...CAAGTCACTTCCAAGACCCATACACAGACAGCTATTGGCCCTACTCCAGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR TCA 90 bp | CTCCGATTTTCAGAATTCTCCAGCAATCTTCTTCCCCAACAACACCCTCTTACTGGATCACAACCACAGTaGGGTGGGAAGCACAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LRFSEFSSNLLPQQHPLTGSQPQ*GGKHKW Trigger: CCACTTGTGCTTCCCACCTCACTGTGGTTGTGATCC...AGTAAGAGGGTGTTGTTGGGGAAGAAGATTGCTGGAGAATTCTGAAAATCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR TCA 90 bp | ATCTTCTGGAGTAGGGCCAATAGCTGTCTGTGTATGGGTCTTGGAAGTGACTTGGTCACTGAGATCAACTaGTCCTGGTCCCTAGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: IFWSRANSCLCMGLGSDLVTEIN*SWSLVF Trigger: GAACACTAGGGACCAGGATCAGTTGATCTCAGTGAC...CAAGTCACTTCCAAGACCCATACACAGACAGCTATTGGCCCTACTCCAGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR TCA 90 bp | ATCTTCTGGAGTAGGGCCAATAGCTGTCTGTGTATGGGTCTTGGAAGTGACTTGACGAAGAGTGTGAGCTaGTGCTCTTGGAAATTGGAG | + |
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Preference number: 4 (lower is better) Translates to: IFWSRANSCLCMGLGSDLTKSVS*CSWKLE Trigger: CTCCAATTTCCAAGAGCATCAGCTCACACTCTTCGT...CAAGTCACTTCCAAGACCCATACACAGACAGCTATTGGCCCTACTCCAGAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR TCA 90 bp | AGGAAATGGGAAGCTCTTTTAGAGTTCCATGTGTGGCTGCTTGAAGATAGCTGGTGCAAAATGGCAGCCTaGATATGGCCACAGCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: RKWEALLEFHVWLLEDSWCKMAA*IWPQPE Trigger: TTCAGGCTGTGGCCATATTCAGGCTGCCATTTTGCA...CCAGCTATCTTCAAGCAGCCACACATGGAACTCTAAAAGAGCTTCCCATTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR TCA 90 bp | AGGAAATGGGAAGCTCTTTTAGAGTTCCATGTGTGGCTGCTTGAAGATAGCTGGGTCCCTAGTGTTCTCTaGTTTGGGCTTGAAGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: RKWEALLEFHVWLLEDSWVPSVL*FGLEVG Trigger: GCCTACTTCAAGCCCAAATCAGAGAACACTAGGGAC...CCAGCTATCTTCAAGCAGCCACACATGGAACTCTAAAAGAGCTTCCCATTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR CCA 90 bp | CAGAAAGGTGTGGTATTGGCTTCCTTTTCCACTAAATTCCTTTTCGCTGCCTTGAGAGCAAGAACCCTGTaGCTCCCACTGAAGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: QKGVVLASFSTKFLFAALRARTL*LPLKMP Trigger: TGGCATCTTCAGTGGGAGCCACAGGGTTCTTGCTCT...CAAGGCAGCGAAAAGGAATTTAGTGGAAAAGGAAGCCAATACCACACCTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR CCA 90 bp | TTGACCTTCCCTTCTTCTCCGATTTTCAGAATTCTCCAGCAATCTTCTTCCCCAAGAGCAAGAACCCTGTaGCTCCCACTGAAGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: LTFPSSPIFRILQQSSSPRARTL*LPLKMP Trigger: TGGCATCTTCAGTGGGAGCCACAGGGTTCTTGCTCT...TGGGGAAGAAGATTGCTGGAGAATTCTGAAAATCGGAGAAGAAGGGAAGGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR CCA 90 bp | ATCTTCTGGAGTAGGGCCAATAGCTGTCTGTGTATGGGTCTTGGAAGTGACTTGCAGTGTGTTGCAAAATaGCAGCCTGAATATGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: IFWSRANSCLCMGLGSDLQCVAK*QPEYGH Trigger: GTGGCCATATTCAGGCTGCCATTTTGCAACACACTG...CAAGTCACTTCCAAGACCCATACACAGACAGCTATTGGCCCTACTCCAGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR TCA 90 bp | CTCCGATTTTCAGAATTCTCCAGCAATCTTCTTCCCCAACAACACCCTCTTACTGTCCCTAGTGTTCTCTaGTTTGGGCTTGAAGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: LRFSEFSSNLLPQQHPLTVPSVL*FGLEVG Trigger: GCCTACTTCAAGCCCAAATCAGAGAACACTAGGGAC...AGTAAGAGGGTGTTGTTGGGGAAGAAGATTGCTGGAGAATTCTGAAAATCGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGAAGCTCTTTTAGAGTTCCATGTGTGGCTGCTTGAAGATAGCTGGCAGTGTGTTGCAAAATaGCAGCCTGAATATGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RKWEALLEFHVWLLEDSWQCVAK*QPEYGH Trigger: GTGGCCATATTCAGGCTGCCATTTTGCAACACACTG...CCAGCTATCTTCAAGCAGCCACACATGGAACTCTAAAAGAGCTTCCCATTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR CCA 90 bp | ATCTTCTGGAGTAGGGCCAATAGCTGTCTGTGTATGGGTCTTGGAAGTGACTTGGATATCATTGATGACTaGCACTGTACAGGCCAGATC | + |
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Preference number: 4 (lower is better) Translates to: IFWSRANSCLCMGLGSDLDIIDD*HCTGQI Trigger: GATCTGGCCTGTACAGTGCCAGTCATCAATGATATC...CAAGTCACTTCCAAGACCCATACACAGACAGCTATTGGCCCTACTCCAGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR TCA 90 bp | AGGAAATGGGAAGCTCTTTTAGAGTTCCATGTGTGGCTGCTTGAAGATAGCTGGGCAGGAGACAGTTGGTaGTTGCAAATCCAAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: RKWEALLEFHVWLLEDSWAGDSW*LQIQGK Trigger: TTTTCCTTGGATTTGCAATCACCAACTGTCTCCTGC...CCAGCTATCTTCAAGCAGCCACACATGGAACTCTAAAAGAGCTTCCCATTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR TCA 90 bp | CTCCGATTTTCAGAATTCTCCAGCAATCTTCTTCCCCAACAACACCCTCTTACTAGACAACGAAGAGTGTaGGCTGATGCTCTTGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: LRFSEFSSNLLPQQHPLTRQRRV*ADALGN Trigger: ATTTCCAAGAGCATCAGCTCACACTCTTCGTTGTCT...AGTAAGAGGGTGTTGTTGGGGAAGAAGATTGCTGGAGAATTCTGAAAATCGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR CCA 90 bp | TTGACCTTCCCTTCTTCTCCGATTTTCAGAATTCTCCAGCAATCTTCTTCCCCAGATATCATTGATGACTaGCACTGTACAGGCCAGATC | + |
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Preference number: 4 (lower is better) Translates to: LTFPSSPIFRILQQSSSPDIIDD*HCTGQI Trigger: GATCTGGCCTGTACAGTGCCAGTCATCAATGATATC...TGGGGAAGAAGATTGCTGGAGAATTCTGAAAATCGGAGAAGAAGGGAAGGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR TCA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACAGGATCACAACCACAGTaGGGTGGGAAGCACAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: CPIRFHVKKMKLFGEELTGSQPQ*GGKHKW Trigger: CCACTTGTGCTTCCCACCTCACTGTGGTTGTGATCC...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| CDS-3UTR CCA 90 bp | ATTGGGAATCATGTAATTTCTTTCAGAAAGGTGTGGTATTGGCTTCCTTTTCCATCCAGGGAGATGGTTTaGCTCAGACCTACAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: IGNHVISFRKVWYWLPFPSREMV*LRPTRL Trigger: CAGCCTTGTAGGTCTGAGCCAAACCATCTCCCTGGA...TGGAAAAGGAAGCCAATACCACACCTTTCTGAAAGAAATTACATGATTCCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR CAA 72 bp | TTTCCTCTTCACAGCCTATCCTTAGATCCCTTTCATTaGGAATTCTACCTGTGGCAGATAGGAAATGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FPLHSLSLDPFH*EFYLWQIGNGK Trigger: CTTCCCATTTCCTATCTGCCACAGGTAGAATTCCAAATGAAAGGGATCTAAGGATAGGCTGTGAAGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
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| 3UTR CAA 72 bp | ACTCAACTCTCAGGAAGTTCCCACAGAGATTTCTTCTaGACCTTCCCTTCTTCTCCGATTTTCAGAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLSGSSHRDFF*TFPSSPIFRIL Trigger: GAGAATTCTGAAAATCGGAGAAGAAGGGAAGGTCAAGAAGAAATCTCTGTGGGAACTTCCTGAGAGTTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| 3UTR CAA 72 bp | TTGGCTTCCTTTTCCACTAAATTCCTTTTCGCTGCCTaGGTGACTTGGTTTATGAGAGGAAGAAGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LASFSTKFLFAA*VTWFMRGRSLI Trigger: GATGAGACTTCTTCCTCTCATAAACCAAGTCACCAAGGCAGCGAAAAGGAATTTAGTGGAAAAGGAAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCCTCCATCAAGAGTACTAGGAGCGCTGAATGACAATCAGATTGAAGGAGCAGGAGACAGTTGGTaGTTGCAAATCCAAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IFPPSRVLGALNDNQIEGAGDSW*LQIQGK Trigger: TTTTCCTTGGATTTGCAATCACCAACTGTCTCCTGC...TCCTTCAATCTGATTGTCATTCAGCGCTCCTAGTACTCTTGATGGAGGAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR TCA 90 bp | ATTGGGAATCATGTAATTTCTTTCAGAAAGGTGTGGTATTGGCTTCCTTTTCCATGCAAAATGGCAGCCTaGATATGGCCACAGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IGNHVISFRKVWYWLPFPCKMAA*IWPQPE Trigger: TTCAGGCTGTGGCCATATTCAGGCTGCCATTTTGCA...TGGAAAAGGAAGCCAATACCACACCTTTCTGAAAGAAATTACATGATTCCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTTATACCTTGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGTCACTGAGATCAACTaGTCCTGGTCCCTAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFIPCPIRFHVKKMKLFGVTEIN*SWSLVF Trigger: GAACACTAGGGACCAGGATCAGTTGATCTCAGTGAC...TCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCAAGGTATAAAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACATCCAGGGAGATGGTTTaGCTCAGACCTACAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPIRFHVKKMKLFGEELTSREMV*LRPTRL Trigger: CAGCCTTGTAGGTCTGAGCCAAACCATCTCCCTGGA...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTATACCTTGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAAGCACTCCAGGGAGATaGTTTGGCTCAGACCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: GFIPCPIRFHVKKMKLFGSTPGR*FGSDLQ Trigger: TTGTAGGTCTGAGCCAAACCATCTCCCTGGAGTGCT...TCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCAAGGTATAAAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACAAGAGCAAGAACCCTGTaGCTCCCACTGAAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPIRFHVKKMKLFGEELTRARTL*LPLKMP Trigger: TGGCATCTTCAGTGGGAGCCACAGGGTTCTTGCTCT...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR TCA 90 bp | AAACCATGGCTTTATACCTTGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTACGAAGAGTGTGAGCTaGTGCTCTTGGAAATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KPWLYTLPYQVPCEKDEITKSVS*CSWKLE Trigger: CTCCAATTTCCAAGAGCATCAGCTCACACTCTTCGT...AATTTCATCTTTTTCACATGGAACCTGATAGGGCAAGGTATAAAGCCATGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACATGCAAAATGGCAGCCTaGATATGGCCACAGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CPIRFHVKKMKLFGEELTCKMAA*IWPQPE Trigger: TTCAGGCTGTGGCCATATTCAGGCTGCCATTTTGCA...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACAGTCCCTAGTGTTCTCTaGTTTGGGCTTGAAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPIRFHVKKMKLFGEELTVPSVL*FGLEVG Trigger: GCCTACTTCAAGCCCAAATCAGAGAACACTAGGGAC...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACAGTCACTGAGATCAACTaGTCCTGGTCCCTAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CPIRFHVKKMKLFGEELTVTEIN*SWSLVF Trigger: GAACACTAGGGACCAGGATCAGTTGATCTCAGTGAC...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACAAGCACTCCAGGGAGATaGTTTGGCTCAGACCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: CPIRFHVKKMKLFGEELTSTPGR*FGSDLQ Trigger: TTGTAGGTCTGAGCCAAACCATCTCCCTGGAGTGCT...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACAACGAAGAGTGTGAGCTaGTGCTCTTGGAAATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPIRFHVKKMKLFGEELTTKSVS*CSWKLE Trigger: CTCCAATTTCCAAGAGCATCAGCTCACACTCTTCGT...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACACAGTGTGTTGCAAAATaGCAGCCTGAATATGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CPIRFHVKKMKLFGEELTQCVAK*QPEYGH Trigger: GTGGCCATATTCAGGCTGCCATTTTGCAACACACTG...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| 3UTR CAA 72 bp | TGGGAATCATGTAATTTCTTTCAGAAAGGTGTGGTATaGGCTTCCTTTTCCACTAAATTCCTTTTCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WESCNFFQKGVV*ASFSTKFLFAA Trigger: GGCAGCGAAAAGGAATTTAGTGGAAAAGGAAGCCAATACCACACCTTTCTGAAAGAAATTACATGATTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACAAGACAACGAAGAGTGTaGGCTGATGCTCTTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CPIRFHVKKMKLFGEELTRQRRV*ADALGN Trigger: ATTTCCAAGAGCATCAGCTCACACTCTTCGTTGTCT...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACAGCAGGAGACAGTTGGTaGTTGCAAATCCAAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CPIRFHVKKMKLFGEELTAGDSW*LQIQGK Trigger: TTTTCCTTGGATTTGCAATCACCAACTGTCTCCTGC...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACAGATATCATTGATGACTaGCACTGTACAGGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: CPIRFHVKKMKLFGEELTDIIDD*HCTGQI Trigger: GATCTGGCCTGTACAGTGCCAGTCATCAATGATATC...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| 3UTR CAA 72 bp | GAGTCTTCTAAACACATAAAACCATGGCTTTATACCTaGCCCTATCAGGTTCCATGTGAAAAAGATGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: ESSKHIKPWLYT*PYQVPCEKDEI Trigger: AATTTCATCTTTTTCACATGGAACCTGATAGGGCAAGGTATAAAGCCATGGTTTTATGTGTTTAGAAGACTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS TCA 90 bp | TCAATCAGTGTGTTGCAAAATGGCAGCCTGAATATGGCCACAGCCTaGATTAGTGAGAGCAAGAACCCTGTGGCTCCCACTGAAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: SISVLQNGSLNMATA*ISESKNPVAPTEDA Trigger: GGCATCTTCAGTGGGAGCCACAGGGTTCTTGCTCTCACTAATTCAGGCTGTGGCCATATTCAGGCTGCCATTTTGCAACACACTGATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CAA 90 bp | TTGACCTTCCCTTCTTCTCCGATTTTCAGAATTCTCCAGCAATCTTCTTCCCCACTCCAGGGAGATGGTTaGGCTCAGACCTACAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTFPSSPIFRILQQSSSPLQGDG*AQTYKA Trigger: AGCCTTGTAGGTCTGAGCCAAACCATCTCCCTGGAG...TGGGGAAGAAGATTGCTGGAGAATTCTGAAAATCGGAGAAGAAGGGAAGGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS TCA 90 bp | CATCGCAGAAGAAATGTTCAATCAGTGTGTTGCAAAATGGCAGCCTaGATATGGCCACAGCCTGAATTAGTGAGAGCAAGAACCCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HRRRNVQSVCCKMAA*IWPQPELVRARTLW Trigger: CCACAGGGTTCTTGCTCTCACTAATTCAGGCTGTGGCCATATTCAGGCTGCCATTTTGCAACACACTGATTGAACATTTCTTCTGCGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAATGGGAAGCTCTTTTAGAGTTCCATGTGTGGCTGCTTGAAGATAGCTGGGTCACAATGATGACATaGCCAGCCAGAGTCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: RKWEALLEFHVWLLEDSWVTMMT*PARVRI Trigger: TATCCTGACTCTGGCTGGCAATGTCATCATTGTGAC...CCAGCTATCTTCAAGCAGCCACACATGGAACTCTAAAAGAGCTTCCCATTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAAGGTGTGGTATTGGCTTCCTTTTCCACTAAATTCCTTTTCGCTGCCTTGGCTAGCAGGAGACAGTaGGTGATTGCAAATCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QKGVVLASFSTKFLFAALASRRQ*VIANPR Trigger: CCTTGGATTTGCAATCACCAACTGTCTCCTGCTAGC...CAAGGCAGCGAAAAGGAATTTAGTGGAAAAGGAAGCCAATACCACACCTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACACTCCAGGGAGATGGTTaGGCTCAGACCTACAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPIRFHVKKMKLFGEELTLQGDG*AQTYKA Trigger: AGCCTTGTAGGTCTGAGCCAAACCATCTCCCTGGAG...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CAA 90 bp | GGCTTTATACCTTGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGTCACAATGATGACATaGCCAGCCAGAGTCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: GFIPCPIRFHVKKMKLFGVTMMT*PARVRI Trigger: TATCCTGACTCTGGCTGGCAATGTCATCATTGTGAC...TCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCAAGGTATAAAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACAGCTAGCAGGAGACAGTaGGTGATTGCAAATCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CPIRFHVKKMKLFGEELTASRRQ*VIANPR Trigger: CCTTGGATTTGCAATCACCAACTGTCTCCTGCTAGC...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACAGTCACAATGATGACATaGCCAGCCAGAGTCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: CPIRFHVKKMKLFGEELTVTMMT*PARVRI Trigger: TATCCTGACTCTGGCTGGCAATGTCATCATTGTGAC...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CAA 90 bp | GGCTTTATACCTTGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGATGTTCAATCAGTGTGTaGCAAAATGGCAGCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GFIPCPIRFHVKKMKLFGCSISV*QNGSLN Trigger: ATTCAGGCTGCCATTTTGCAACACACTGATTGAACA...TCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCAAGGTATAAAGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CAA 90 bp | AAACCATGGCTTTATACCTTGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTAACGTCAAGATATCATaGATGACTGGCACTGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: KPWLYTLPYQVPCEKDEINVKIS*MTGTVQ Trigger: CTGTACAGTGCCAGTCATCAATGATATCTTGACGTT...AATTTCATCTTTTTCACATGGAACCTGATAGGGCAAGGTATAAAGCCATGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CAA 90 bp | GGCTTTATACCTTGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAAACGTCAAGATATCATaGATGACTGGCACTGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: GFIPCPIRFHVKKMKLFGNVKIS*MTGTVQ Trigger: CTGTACAGTGCCAGTCATCAATGATATCTTGACGTT...TCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCAAGGTATAAAGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACATGTTCAATCAGTGTGTaGCAAAATGGCAGCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CPIRFHVKKMKLFGEELTCSISV*QNGSLN Trigger: ATTCAGGCTGCCATTTTGCAACACACTGATTGAACA...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCTATCAGGTTCCATGTGAAAAAGATGAAATTATTTGGAGAGGAATTAACAAACGTCAAGATATCATaGATGACTGGCACTGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: CPIRFHVKKMKLFGEELTNVKIS*MTGTVQ Trigger: CTGTACAGTGCCAGTCATCAATGATATCTTGACGTT...TGTTAATTCCTCTCCAAATAATTTCATCTTTTTCACATGGAACCTGATAGGGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS TCA 72 bp | GTGTTGCAAAATGGCAGCCTGAATATGGCCACAGCCTaGATTAGTGAGAGCAAGAACCCTGTGGCTCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: VLQNGSLNMATA*ISESKNPVAPT Trigger: AGTGGGAGCCACAGGGTTCTTGCTCTCACTAATTCAGGCTGTGGCCATATTCAGGCTGCCATTTTGCAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS CAA 90 bp | GGGGCTGTGATGACCATAAGGCTAAGAGCTAACGTCAAGATATCATaGATGACTGGCACTGTACAGGCCAGATCTAAAATAGGACGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GAVMTIRLRANVKIS*MTGTVQARSKIGRT Trigger: TGTCCGTCCTATTTTAGATCTGGCCTGTACAGTGCCAGTCATCAATGATATCTTGACGTTAGCTCTTAGCCTTATGGTCATCACAGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||
| CDS TCA 72 bp | AGAAATGTTCAATCAGTGTGTTGCAAAATGGCAGCCTaGATATGGCCACAGCCTGAATTAGTGAGAGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RNVQSVCCKMAA*IWPQPELVRAR Trigger: TCTTGCTCTCACTAATTCAGGCTGTGGCCATATTCAGGCTGCCATTTTGCAACACACTGATTGAACATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072395.3 ENSMUST00000201132.3 ENSMUST00000215878.2 |
||