Pregenerated sensors for OLFR1404 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049456Ensembl transcript IDs: ENSMUST00000056592.3, ENSMUST00000216556.2, ENSMUST00000217374.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGACGCCAGGACAGAGGCTTGGATGCAGCATCCACACCTTAGCTaGAGTGAAGGAAGCTGGGTTGAGAGAGACAAGCTGAAATGTGAA | + |
|
Preference number: 1 (lower is better) Translates to: TDARTEAWMQHPHLS*SEGSWVERDKLKCE Trigger: TTCACATTTCAGCTTGTCTCTCTCAACCCAGCTTCCTTCACTCCAGCTAAGGTGTGGATGCTGCATCCAAGCCTCTGTCCTGGCGTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR CCA 90 bp | GAGGCTTGGATGCAGCATCCACACCTTAGCTGGAGTGAAGGAAGCTaGGTTGAGAGAGACAAGCTGAAATGTGAACCAGTCACTGCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: EAWMQHPHLSWSEGS*VERDKLKCEPVTAE Trigger: TTCTGCAGTGACTGGTTCACATTTCAGCTTGTCTCTCTCAACCCAGCTTCCTTCACTCCAGCTAAGGTGTGGATGCTGCATCCAAGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR GCA 90 bp | TTCTTCACAAATGCCACCTCTTCTAGAATCGGAATTCTAAACTGCTaGTGCAGTTTTCTGACCCTGGGAAACAGACGCCAGGACAGAGGC | + |
|
Preference number: 1 (lower is better) Translates to: FFTNATSSRIGILNC*CSFLTLGNRRQDRG Trigger: GCCTCTGTCCTGGCGTCTGTTTCCCAGGGTCAGAAAACTGCAGCAGCAGTTTAGAATTCCGATTCTAGAAGAGGTGGCATTTGTGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR GCA 90 bp | GTGTTCTTCACAAATGCCACCTCTTCTAGAATCGGAATTCTAAACTaGTGCTGCAGTTTTCTGACCCTGGGAAACAGACGCCAGGACAGA | + |
|
Preference number: 1 (lower is better) Translates to: VFFTNATSSRIGILN*CCSFLTLGNRRQDR Trigger: TCTGTCCTGGCGTCTGTTTCCCAGGGTCAGAAAACTGCAGCAGCAGTTTAGAATTCCGATTCTAGAAGAGGTGGCATTTGTGAAGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR CCA 90 bp | CAGAGTTACCAAAATTGTCTTTTAGTCGCCTCCACAGAAAGTAACTaGCTCTACTGTTTCTGGAAAGCTGAACACATAGCCTTCCACACT | + |
|
Preference number: 1 (lower is better) Translates to: QSYQNCLLVASTESN*LYCFWKAEHIAFHT Trigger: AGTGTGGAAGGCTATGTGTTCAGCTTTCCAGAAACAGTAGAGCCAGTTACTTTCTGTGGAGGCGACTAAAAGACAATTTTGGTAACTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR GCA 90 bp | CACATGACAGCAACTCATAGTATTCTCATGGAGAGTGTAGCTATGTaGACAAGTCAACAGTTCTATATACAAAGCAGTGTTGCTCTTATA | + |
|
Preference number: 1 (lower is better) Translates to: HMTATHSILMESVAM*TSQQFYIQSSVALI Trigger: TATAAGAGCAACACTGCTTTGTATATAGAACTGTTGACTTGTGCACATAGCTACACTCTCCATGAGAATACTATGAGTTGCTGTCATGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR CCA 90 bp | CATAAAATGTGTGTTTCTGTACCAACCACAGCAAACGGGTCTTTCTaGGTTGGTTTCCAAACATATTTATCAGATTTAGAAACTTATAGG | + |
|
Preference number: 1 (lower is better) Translates to: HKMCVSVPTTANGSF*VGFQTYLSDLETYR Trigger: CCTATAAGTTTCTAAATCTGATAAATATGTTTGGAAACCAACCCAGAAAGACCCGTTTGCTGTGGTTGGTACAGAAACACACATTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCAGTTTTCTGACCCTGGGAAACAGACGCCAGGACAGAGGCTTGGATGCAGGAGGGCAGATGGGATaGGGGACTTGTGGAGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: CCSFLTLGNRRQDRGLDAGGQMG*GTCGGE Trigger: CTCTCCTCCACAAGTCCCCCATCCCATCTGCCCTCC...TGCATCCAAGCCTCTGTCCTGGCGTCTGTTTCCCAGGGTCAGAAAACTGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGCAGTTTTCTGACCCTGGGAAACAGACGCCAGGACAGAGGCTTGGATGCACCTGCCTTCTCAGTCTaGGTCTTCTTATGTATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: CCSFLTLGNRRQDRGLDAPAFSV*VFLCMC Trigger: ACACATACATAAGAAGACTCAGACTGAGAAGGCAGG...TGCATCCAAGCCTCTGTCCTGGCGTCTGTTTCCCAGGGTCAGAAAACTGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTACACCATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATGGGATGGGGGACTTGTaGAGGAGAGAATGGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TLHHVTDDSSGLEIALHHGMGDL*RREWEG Trigger: CCCTTCCCATTCTCTCCTCCACAAGTCCCCCATCCC...ATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATGGTGTAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCCTACACCATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATAGCTCACCTTGCCCATaGCTGCCTTCTCAGTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: TLHHVTDDSSGLEIALHHSSPCP*LPSQSE Trigger: CTCAGACTGAGAAGGCAGGCATGGGCAAGGTGAGCT...ATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATGGTGTAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CCA 90 bp | GGACTTGAGATAGCTCTTCATCATCACCATAGAGAGGAGATACCACGGATTAGAGGGATGGGGGACTTGTaGAGGAGAGAATGGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GLEIALHHHHREEIPRIRGMGDL*RREWEG Trigger: CCCTTCCCATTCTCTCCTCCACAAGTCCCCCATCCC...TCTAATCCGTGGTATCTCCTCTCTATGGTGATGATGAAGAGCTATCTCAAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATCACCATAGAAAAGGGGAGGGCAGATaGGATGGGGGACTTGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HVTDDSSGLEIALHHHHRKGEGR*DGGLVE Trigger: CTCCACAAGTCCCCCATCCCATCTGCCCTCCCCTTT...TCTATGGTGATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR GCA 90 bp | GACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGAGCTCACCTTGCCCATaGCTGCCTTCTCAGTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: DMLKAQRCSSLARMLPEGSSPCP*LPSQSE Trigger: CTCAGACTGAGAAGGCAGGCATGGGCAAGGTGAGCT...CCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCAGTTTTCTGACCCTGGGAAACAGACGCCAGGACAGAGGCTTGGATGCAGGGGGAGTTCATGAGTaGTTTTACTTCATACCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: CCSFLTLGNRRQDRGLDAGGVHE*FYFIPL Trigger: TAAAGGTATGAAGTAAAACCACTCATGAACTCCCCC...TGCATCCAAGCCTCTGTCCTGGCGTCTGTTTCCCAGGGTCAGAAAACTGCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCACGTCCCCAGGACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGTCAGCCTTAAAAGGATaGATAAAGCTCACCTTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: AARPQDMLKAQRCSSLARSALKG*IKLTLP Trigger: GGGCAAGGTGAGCTTTATTCATCCTTTTAAGGCTGA...CCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTCCTGGGGACGTGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCATCACCATAGAGAGGAGATACCACGGATTAGACAAACGACTGGACGCAGCATTGTGGAGGAGAGAATaGGAAGGGGGACAACATTTG | + |
|
Preference number: 2 (lower is better) Translates to: IITIERRYHGLDKRLDAALWRRE*EGGQHL Trigger: CAAATGTTGTCCCCCTTCCCATTCTCTCCTCCACAA...TGCTGCGTCCAGTCGTTTGTCTAATCCGTGGTATCTCCTCTCTATGGTGATGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCATCACCATAGAGAGGAGATACCACGGATTAGACAAACGACTGGACGCAGCATCAGCCTTAAAAGGATaGATAAAGCTCACCTTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: IITIERRYHGLDKRLDAASALKG*IKLTLP Trigger: GGGCAAGGTGAGCTTTATTCATCCTTTTAAGGCTGA...TGCTGCGTCCAGTCGTTTGTCTAATCCGTGGTATCTCCTCTCTATGGTGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCACGTCCCCAGGACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGGCAAACGGGTCTTTCTaGGTTGGTTTCCAAACATAT | + |
|
Preference number: 2 (lower is better) Translates to: AARPQDMLKAQRCSSLARANGSF*VGFQTY Trigger: ATATGTTTGGAAACCAACCCAGAAAGACCCGTTTGC...CCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTCCTGGGGACGTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCCTACACCATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATACTTGGGGGAGTTCATaGGTGGTTTTACTTCATACC | + |
|
Preference number: 2 (lower is better) Translates to: TLHHVTDDSSGLEIALHHTWGSS*VVLLHT Trigger: GGTATGAAGTAAAACCACTCATGAACTCCCCCAAGT...ATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATGGTGTAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CCA 90 bp | GGACTTGAGATAGCTCTTCATCATCACCATAGAGAGGAGATACCACGGATTAGATTGTGGAGGAGAGAATaGGAAGGGGGACAACATTTG | + |
|
Preference number: 2 (lower is better) Translates to: GLEIALHHHHREEIPRIRLWRRE*EGGQHL Trigger: CAAATGTTGTCCCCCTTCCCATTCTCTCCTCCACAA...TCTAATCCGTGGTATCTCCTCTCTATGGTGATGATGAAGAGCTATCTCAAGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | CATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATCACCATAGATGTGTAAAAGGATTGTaGAGAGGCCACACCTGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: HVTDDSSGLEIALHHHHRCVKGL*RGHTCV Trigger: AACACAGGTGTGGCCTCTTCACAATCCTTTTACACA...TCTATGGTGATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | GGACTTGAGATAGCTCTTCATCATCACCATAGAGAGGAGATACCACGGATTAGACCTGCCTTCTCAGTCTaGGTCTTCTTATGTATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: GLEIALHHHHREEIPRIRPAFSV*VFLCMC Trigger: ACACATACATAAGAAGACTCAGACTGAGAAGGCAGG...TCTAATCCGTGGTATCTCCTCTCTATGGTGATGATGAAGAGCTATCTCAAGTCC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGGACTCAATGTTCCTTTCACTGTaGTATCTACAGGCTCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LKAQRCSSLARMLPEGDSMFLSL*YLQAPS Trigger: GGAAGGAGCCTGTAGATATCACAGTGAAAGGAACAT...TGAGTCCCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | GACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGATGTTCCTTTCACTGTaGTATCTACAGGCTCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: DMLKAQRCSSLARMLPEGMFLSL*YLQAPS Trigger: GGAAGGAGCCTGTAGATATCACAGTGAAAGGAACAT...CCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | CATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATCACCATAGAACTTGGGGGAGTTCATaGGTGGTTTTACTTCATACC | + |
|
Preference number: 2 (lower is better) Translates to: HVTDDSSGLEIALHHHHRTWGSS*VVLLHT Trigger: GGTATGAAGTAAAACCACTCATGAACTCCCCCAAGT...TCTATGGTGATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGGACTCATGGCTCTACTGTTTCTaGAAAGCTGAACACATAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LKAQRCSSLARMLPEGDSWLYCF*KAEHIA Trigger: GGCTATGTGTTCAGCTTTCCAGAAACAGTAGAGCCA...TGAGTCCCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CCA 90 bp | GACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGTGGCTCTACTGTTTCTaGAAAGCTGAACACATAGCC | + |
|
Preference number: 2 (lower is better) Translates to: DMLKAQRCSSLARMLPEGWLYCF*KAEHIA Trigger: GGCTATGTGTTCAGCTTTCCAGAAACAGTAGAGCCA...CCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCATCACCATAGAGAGGAGATACCACGGATTAGACAAACGACTGGACGCAGCATTAAAAGCACAAAGATaGAGTTCCTTAGCAAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: IITIERRYHGLDKRLDAALKAQR*SSLARM Trigger: CATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAA...TGCTGCGTCCAGTCGTTTGTCTAATCCGTGGTATCTCCTCTCTATGGTGATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGGACTCAGCAAACGGGTCTTTCTaGGTTGGTTTCCAAACATAT | + |
|
Preference number: 2 (lower is better) Translates to: LKAQRCSSLARMLPEGDSANGSF*VGFQTY Trigger: ATATGTTTGGAAACCAACCCAGAAAGACCCGTTTGC...TGAGTCCCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | GGACTTGAGATAGCTCTTCATCATCACCATAGAGAGGAGATACCACGGATTAGAGTGTTCTGGTTTTGCTaGTACCATAAGATAAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GLEIALHHHHREEIPRIRVFWFC*YHKIRH Trigger: ATGCCTTATCTTATGGTATCAGCAAAACCAGAACAC...TCTAATCCGTGGTATCTCCTCTCTATGGTGATGATGAAGAGCTATCTCAAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGGACTCAGTGTTCTGGTTTTGCTaGTACCATAAGATAAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: LKAQRCSSLARMLPEGDSVFWFC*YHKIRH Trigger: ATGCCTTATCTTATGGTATCAGCAAAACCAGAACAC...TGAGTCCCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCCTACACCATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATTTAAAAGCACAAAGATaGAGTTCCTTAGCAAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: TLHHVTDDSSGLEIALHHLKAQR*SSLARM Trigger: CATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAA...ATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATGGTGTAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGGACTCAGGGGGAGTTCATGAGTaGTTTTACTTCATACCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LKAQRCSSLARMLPEGDSGGVHE*FYFIPL Trigger: TAAAGGTATGAAGTAAAACCACTCATGAACTCCCCC...TGAGTCCCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGGACTCAGTGTTGCTCTTATATTaGACAAGTTTAGGCTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LKAQRCSSLARMLPEGDSVLLLY*TSLGLK Trigger: CTTCAAGCCTAAACTTGTTCAATATAAGAGCAACAC...TGAGTCCCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR TCA 90 bp | GACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGGTGTTGCTCTTATATTaGACAAGTTTAGGCTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: DMLKAQRCSSLARMLPEGVLLLY*TSLGLK Trigger: CTTCAAGCCTAAACTTGTTCAATATAAGAGCAACAC...CCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR CCA 72 bp | AGGACAGAGGCTTGGATGCAGCATCCACACCTTAGCTaGAGTGAAGGAAGCTGGGTTGAGAGAGACAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RTEAWMQHPHLS*SEGSWVERDKL Trigger: CAGCTTGTCTCTCTCAACCCAGCTTCCTTCACTCCAGCTAAGGTGTGGATGCTGCATCCAAGCCTCTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR TCA 72 bp | AGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTaGAGGGGACTCACTGAGAGCCTCACTCTAGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: STKMQFLSKDAS*RGLTESLTLGF Trigger: GAACCCTAGAGTGAGGCTCTCAGTGAGTCCCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR TCA 72 bp | GCTGGAGTGAAGGAAGCTGGGTTGAGAGAGACAAGCTaGAATGTGAACCAGTCACTGCAGAAACCCTACACC | + |
|
Preference number: 3 (lower is better) Translates to: AGVKEAGLRETS*NVNQSLQKPYT Trigger: GGTGTAGGGTTTCTGCAGTGACTGGTTCACATTTCAGCTTGTCTCTCTCAACCCAGCTTCCTTCACTCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR GCA 72 bp | GCCACCTCTTCTAGAATCGGAATTCTAAACTGCTGCTaGAGTTTTCTGACCCTGGGAAACAGACGCCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: ATSSRIGILNCC*SFLTLGNRRQD Trigger: GTCCTGGCGTCTGTTTCCCAGGGTCAGAAAACTGCAGCAGCAGTTTAGAATTCCGATTCTAGAAGAGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR CCA 72 bp | GTCGCCTCCACAGAAAGTAACTGGCTCTACTGTTTCTaGAAAGCTGAACACATAGCCTTCCACACTCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VASTESNWLYCF*KAEHIAFHTPS Trigger: GGAAGGAGTGTGGAAGGCTATGTGTTCAGCTTTCCAGAAACAGTAGAGCCAGTTACTTTCTGTGGAGGCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CAA 90 bp | GACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGGATGGGATGGGGGACTaGTGGAGGAGAGAATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: DMLKAQRCSSLARMLPEGDGMGD*WRREWE Trigger: TTCCCATTCTCTCCTCCACAAGTCCCCCATCCCATC...CCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACTTGAGATAGCTCTTCATCATCACCATAGAGAGGAGATACCACGGATTAGAGATGGGATGGGGGACTaGTGGAGGAGAGAATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GLEIALHHHHREEIPRIRDGMGD*WRREWE Trigger: TTCCCATTCTCTCCTCCACAAGTCCCCCATCCCATC...TCTAATCCGTGGTATCTCCTCTCTATGGTGATGATGAAGAGCTATCTCAAGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR TCA 72 bp | TCCAGGTCCACCCTCATTACTTCAGCCTTAAAAGGATaGATAAAGCTCACCTTGCCCATGCCTGCCTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SRSTLITSALKG*IKLTLPMPAFS Trigger: TGAGAAGGCAGGCATGGGCAAGGTGAGCTTTATTCATCCTTTTAAGGCTGAAGTAATGAGGGTGGACCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR GCA 72 bp | AATGCCACCTCTTCTAGAATCGGAATTCTAAACTGCTaGTGCAGTTTTCTGACCCTGGGAAACAGACGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NATSSRIGILNC*CSFLTLGNRRQ Trigger: CTGGCGTCTGTTTCCCAGGGTCAGAAAACTGCAGCAGCAGTTTAGAATTCCGATTCTAGAAGAGGTGGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR GCA 72 bp | ACAAATGCCACCTCTTCTAGAATCGGAATTCTAAACTaGTGCTGCAGTTTTCTGACCCTGGGAAACAGACGC | + |
|
Preference number: 3 (lower is better) Translates to: TNATSSRIGILN*CCSFLTLGNRR Trigger: GCGTCTGTTTCCCAGGGTCAGAAAACTGCAGCAGCAGTTTAGAATTCCGATTCTAGAAGAGGTGGCATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCATCACCATAGAGAGGAGATACCACGGATTAGACAAACGACTGGACGCAGCAACGGGTCTTTCTGGGTaGGTTTCCAAACATATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: IITIERRYHGLDKRLDAATGLSG*VSKHIY Trigger: ATAAATATGTTTGGAAACCAACCCAGAAAGACCCGT...TGCTGCGTCCAGTCGTTTGTCTAATCCGTGGTATCTCCTCTCTATGGTGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACTTGAGATAGCTCTTCATCATCACCATAGAGAGGAGATACCACGGATTAGACCAGAGTTACCAAAATaGTCTTTTAGTCGCCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLEIALHHHHREEIPRIRPELPK*SFSRLH Trigger: GTGGAGGCGACTAAAAGACAATTTTGGTAACTCTGG...TCTAATCCGTGGTATCTCCTCTCTATGGTGATGATGAAGAGCTATCTCAAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CAA 90 bp | GACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGCCAGAGTTACCAAAATaGTCTTTTAGTCGCCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: DMLKAQRCSSLARMLPEGPELPK*SFSRLH Trigger: GTGGAGGCGACTAAAAGACAATTTTGGTAACTCTGG...CCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CAA 90 bp | GACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGTTAGGCTTGAAGGAGTaGGGTAGGGAAATGAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: DMLKAQRCSSLARMLPEGLGLKE*GREMKK Trigger: CTTTTTCATTTCCCTACCCAACTCCTTCAAGCCTAA...CCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACTTGAGATAGCTCTTCATCATCACCATAGAGAGGAGATACCACGGATTAGATTAGGCTTGAAGGAGTaGGGTAGGGAAATGAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLEIALHHHHREEIPRIRLGLKE*GREMKK Trigger: CTTTTTCATTTCCCTACCCAACTCCTTCAAGCCTAA...TCTAATCCGTGGTATCTCCTCTCTATGGTGATGATGAAGAGCTATCTCAAGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR TCA 72 bp | ATAAAGCTCACCTTGCCCATGCCTGCCTTCTCAGTCTaGGTCTTCTTATGTATGTGTAAAAGGATTGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IKLTLPMPAFSV*VFLCMCKRIVK Trigger: CTTCACAATCCTTTTACACATACATAAGAAGACTCAGACTGAGAAGGCAGGCATGGGCAAGGTGAGCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR CCA 72 bp | CAAAATTGTCTTTTAGTCGCCTCCACAGAAAGTAACTaGCTCTACTGTTTCTGGAAAGCTGAACACATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QNCLLVASTESN*LYCFWKAEHIA Trigger: GGCTATGTGTTCAGCTTTCCAGAAACAGTAGAGCCAGTTACTTTCTGTGGAGGCGACTAAAAGACAATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR GCA 72 bp | GCAACTCATAGTATTCTCATGGAGAGTGTAGCTATGTaGACAAGTCAACAGTTCTATATACAAAGCAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ATHSILMESVAM*TSQQFYIQSSV Trigger: AACACTGCTTTGTATATAGAACTGTTGACTTGTGCACATAGCTACACTCTCCATGAGAATACTATGAGTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| 3UTR TCA 72 bp | AACAGTTCTATATACAAAGCAGTGTTGCTCTTATATTaGACAAGTTTAGGCTTGAAGGAGTTGGGTAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NSSIYKAVLLLY*TSLGLKELGRE Trigger: TTCCCTACCCAACTCCTTCAAGCCTAAACTTGTTCAATATAAGAGCAACACTGCTTTGTATATAGAACTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGCAGTTTTCTGACCCTGGGAAACAGACGCCAGGACAGAGGCTTGGATGCATCACTACATAGGAGATaGAGACCACGCCCATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CCSFLTLGNRRQDRGLDASLHRR*RPRPLV Trigger: TACCAATGGGCGTGGTCTTCATCTCCTATGTAGTGA...TGCATCCAAGCCTCTGTCCTGGCGTCTGTTTCCCAGGGTCAGAAAACTGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGCAGTTTTCTGACCCTGGGAAACAGACGCCAGGACAGAGGCTTGGATGCATTTCATGTAGATGATTaGAGTGCAGCCATAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CCSFLTLGNRRQDRGLDAFHVDD*SAAIVD Trigger: ATCCACTATGGCTGCACTGCAATCATCTACATGAAA...TGCATCCAAGCCTCTGTCCTGGCGTCTGTTTCCCAGGGTCAGAAAACTGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR GCA 90 bp | GACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGAAGGCAAGCCTGTGCTaGCAACCAAAGCCGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DMLKAQRCSSLARMLPEGKASLC*QPKPEK Trigger: TTTCTCCGGCTTTGGTTGGCAGCACAGGCTTGCCTT...CCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR GCA 90 bp | CATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATCACCATAGAAAGGCAAGCCTGTGCTaGCAACCAAAGCCGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HVTDDSSGLEIALHHHHRKASLC*QPKPEK Trigger: TTTCTCCGGCTTTGGTTGGCAGCACAGGCTTGCCTT...TCTATGGTGATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGGACTCAGATGAAAGTGGCTTCTaGCACATGGCTCTGCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKAQRCSSLARMLPEGDSDESGF*HMALRR Trigger: CCTACGCAGAGCCATGTGGCAGAAGCCACTTTCATC...TGAGTCCCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR TCA 90 bp | GGACTTGAGATAGCTCTTCATCATCACCATAGAGAGGAGATACCACGGATTAGATCGTGTGGTAAGGATTaGGGAGGTCAGAAAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GLEIALHHHHREEIPRIRSCGKD*GGQKAC Trigger: GCATGCTTTCTGACCTCCTCAATCCTTACCACACGA...TCTAATCCGTGGTATCTCCTCTCTATGGTGATGATGAAGAGCTATCTCAAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR TCA 90 bp | GACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGTCGTGTGGTAAGGATTaGGGAGGTCAGAAAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: DMLKAQRCSSLARMLPEGSCGKD*GGQKAC Trigger: GCATGCTTTCTGACCTCCTCAATCCTTACCACACGA...CCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTACACCATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATTCACTACATAGGAGATaGAGACCACGCCCATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLHHVTDDSSGLEIALHHSLHRR*RPRPLV Trigger: TACCAATGGGCGTGGTCTTCATCTCCTATGTAGTGA...ATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATGGTGTAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR CCA 90 bp | ATCATCACCATAGAGAGGAGATACCACGGATTAGACAAACGACTGGACGCAGCAAATACTGATGTAACTTaGACTATAGCCATGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IITIERRYHGLDKRLDAANTDVT*TIAMPR Trigger: CCTAGGCATGGCTATAGTCCAAGTTACATCAGTATT...TGCTGCGTCCAGTCGTTTGTCTAATCCGTGGTATCTCCTCTCTATGGTGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR TCA 90 bp | GACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGATGCTTCCTGAAGGGGGGCAAGCTAAATACTaGTGTAACTTGGACTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: DMLKAQRCSSLARMLPEGGQAKY*CNLDYS Trigger: GCTATAGTCCAAGTTACATCAGTATTTAGCTTGCCC...CCCTTCAGGAAGCATCCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR GCA 90 bp | ACCCTACACCATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATTTTCATGTAGATGATTaGAGTGCAGCCATAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLHHVTDDSSGLEIALHHFHVDD*SAAIVD Trigger: ATCCACTATGGCTGCACTGCAATCATCTACATGAAA...ATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATGGTGTAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTACACCATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATAATACTGATGTAACTTaGACTATAGCCATGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLHHVTDDSSGLEIALHHNTDVT*TIAMPR Trigger: CCTAGGCATGGCTATAGTCCAAGTTACATCAGTATT...ATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATGGTGTAGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCACGTCCCCAGGACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGCTGCGTAGGGCATCTTaGACCTCCTTATTCCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AARPQDMLKAQRCSSLARLRRAS*TSLFRR Trigger: TCTGCGGAATAAGGAGGTCAAAGATGCCCTACGCAG...CCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTCCTGGGGACGTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTACACCATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATCTGCGTAGGGCATCTTaGACCTCCTTATTCCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLHHVTDDSSGLEIALHHLRRAS*TSLFRR Trigger: TCTGCGGAATAAGGAGGTCAAAGATGCCCTACGCAG...ATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATGGTGTAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCACGTCCCCAGGACATGTTAAAAGCACAAAGATGCAGTTCCTTAGCAAGGACGCTGACTACAAAGTaGATGATCTCATTGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AARPQDMLKAQRCSSLARTLTTK*MISLIV Trigger: CACTATCAATGAGATCATCAACTTTGTAGTCAGCGT...CCTTGCTAAGGAACTGCATCTTTGTGCTTTTAACATGTCCTGGGGACGTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR CAA 90 bp | ATCATCACCATAGAGAGGAGATACCACGGATTAGACAAACGACTGGACGCAGCACTCACAATAATCACATaGCCAGACAGAGTGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: IITIERRYHGLDKRLDAALTIIT*PDRVRK Trigger: TTTTCTCACTCTGTCTGGCAATGTGATTATTGTGAG...TGCTGCGTCCAGTCGTTTGTCTAATCCGTGGTATCTCCTCTCTATGGTGATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS CCA 90 bp | ATAACAAATCTATCACAGAAGGGCAAGCTAAATACTGATGTAACTTaGACTATAGCCATGCCTAGGCCAATTCCCAGTGACCCAGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: ITNLSQKGKLNTDVT*TIAMPRPIPSDPDA Trigger: AGCATCTGGGTCACTGGGAATTGGCCTAGGCATGGCTATAGTCCAAGTTACATCAGTATTTAGCTTGCCCTTCTGTGATAGATTTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056592.3 ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTACACCATGTCACAGATGACAGCTCTGGACTTGAGATAGCTCTTCATCATCTCACAATAATCACATaGCCAGACAGAGTGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TLHHVTDDSSGLEIALHHLTIIT*PDRVRK Trigger: TTTTCTCACTCTGTCTGGCAATGTGATTATTGTGAG...ATGATGAAGAGCTATCTCAAGTCCAGAGCTGTCATCTGTGACATGGTGTAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS CCA 90 bp | AAAAGCAATCGTGTGGTAAGGATTGAGGAGGTCAGAAAGCATGCGTaGTATAATAGTCACGGTATAGCAGGTATCAGAGATAGACAATAT | + |
|
Preference number: 5 (lower is better) Translates to: KSNRVVRIEEVRKHA*YNSHGIAGIRDRQY Trigger: ATATTGTCTATCTCTGATACCTGCTATACCGTGACTATTATACCACGCATGCTTTCTGACCTCCTCAATCCTTACCACACGATTGCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056592.3 ENSMUST00000216556.2 ENSMUST00000217374.2 |
||
| CDS TCA 72 bp | GTGGCTTCTGCCACATGGCTCTGCGTAGGGCATCTTTaGCCTCCTTATTCCGCAGAGTGTATACCAAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VASATWLCVGHL*PPYSAECIPKD Trigger: ATCCTTTGGTATACACTCTGCGGAATAAGGAGGTCAAAGATGCCCTACGCAGAGCCATGTGGCAGAAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056592.3 ENSMUST00000216556.2 ENSMUST00000217374.2 |
||