Pregenerated sensors for OLFR1402 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051392Ensembl transcript IDs: ENSMUST00000060912.4, ENSMUST00000199297.4
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGTTTCTTCAGGTGACTGTGTGCCCCAGTTTGAAGACTAGTGGTTaGGGCAAGTCTATCGCTTGGCCCATCTGCAACATGCATCGTAGG | + |
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Preference number: 1 (lower is better) Translates to: KFLQVTVCPSLKTSG*GKSIAWPICNMHRR Trigger: CCTACGATGCATGTTGCAGATGGGCCAAGCGATAGACTTGCCTCAACCACTAGTCTTCAAACTGGGGCACACAGTCACCTGAAGAAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CCA 90 bp | GCATCTGTCATTGTAGATGGGTCTGCTGAAACACAAATTCCTCTTTaGCTCCTCTGGCCCTTGGCCATTAAGGACAATAGCGGAGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: ASVIVDGSAETQIPL*LLWPLAIKDNSGGQ Trigger: TTGCCCTCCGCTATTGTCCTTAATGGCCAAGGGCCAGAGGAGCCAAAGAGGAATTTGTGTTTCAGCAGACCCATCTACAATGACAGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CCA 90 bp | AAAAGGAGATACAGACCACATCATCAGAAGTCAAGTCTGCCCACCTaGGGCCAAGTTAAGGCCATGTGCACCAAGAGAGAAGTTATTCTA | + |
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Preference number: 1 (lower is better) Translates to: KRRYRPHHQKSSLPT*GQVKAMCTKREVIL Trigger: TAGAATAACTTCTCTCTTGGTGCACATGGCCTTAACTTGGCCCCAGGTGGGCAGACTTGACTTCTGATGATGTGGTCTGTATCTCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CCA 90 bp | GGACATTTAAAGGCTCTTTGGAAAGTCAGTTGGATGGTGTTTTGCTaGGGCAAACACGTGAAGGAACATTTAGCTGAAGTGGACACAGGT | + |
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Preference number: 1 (lower is better) Translates to: GHLKALWKVSWMVFC*GKHVKEHLAEVDTG Trigger: ACCTGTGTCCACTTCAGCTAAATGTTCCTTCACGTGTTTGCCCCAGCAAAACACCATCCAACTGACTTTCCAAAGAGCCTTTAAATGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CCA 90 bp | AGGATGGCACGAAGTGGACATTTAAAGGCTCTTTGGAAAGTCAGTTaGATGGTGTTTTGCTGGGGCAAACACGTGAAGGAACATTTAGCT | + |
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Preference number: 1 (lower is better) Translates to: RMARSGHLKALWKVS*MVFCWGKHVKEHLA Trigger: AGCTAAATGTTCCTTCACGTGTTTGCCCCAGCAAAACACCATCCAACTGACTTTCCAAAGAGCCTTTAAATGTCCACTTCGTGCCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR GCA 90 bp | AGTGGACATTTAAAGGCTCTTTGGAAAGTCAGTTGGATGGTGTTTTaGTGGGGCAAACACGTGAAGGAACATTTAGCTGAAGTGGACACA | + |
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Preference number: 1 (lower is better) Translates to: SGHLKALWKVSWMVF*WGKHVKEHLAEVDT Trigger: TGTGTCCACTTCAGCTAAATGTTCCTTCACGTGTTTGCCCCAGCAAAACACCATCCAACTGACTTTCCAAAGAGCCTTTAAATGTCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CCA 90 bp | CACGAGTCTTATGTCCTCAGTTTCTTTAGACCATGGAATTGTTCTTaGAATGTGATTTTTGTGCTCCACCCAGCTATGGTGGATAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: HESYVLSFFRPWNCS*NVIFVLHPAMVDRS Trigger: ACTCCTATCCACCATAGCTGGGTGGAGCACAAAAATCACATTCCAAGAACAATTCCATGGTCTAAAGAAACTGAGGACATAAGACTCGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CCA 90 bp | GAAAGAAACATTGTTGATATGCATTTTAATGGACTTTTCAGATGCTaGACCAAAGAGGACATCGACACTGCTTGCCCATCCCAGTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: ERNIVDMHFNGLFRC*TKEDIDTACPSQCS Trigger: AGAACACTGGGATGGGCAAGCAGTGTCGATGTCCTCTTTGGTCCAGCATCTGAAAAGTCCATTAAAATGCATATCAACAATGTTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR GCA 90 bp | TTTGAAAGAAACATTGTTGATATGCATTTTAATGGACTTTTCAGATaGTGGACCAAAGAGGACATCGACACTGCTTGCCCATCCCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: FERNIVDMHFNGLFR*WTKEDIDTACPSQC Trigger: ACACTGGGATGGGCAAGCAGTGTCGATGTCCTCTTTGGTCCAGCATCTGAAAAGTCCATTAAAATGCATATCAACAATGTTTCTTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR TCA 90 bp | CAAGAGAGAAGTTATTCTATGAAACACACAGGACACCATGTCACCTaGAAATCTTTTTCTGCTTTGATCTGTGCATCTGTAGTGAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: QERSYSMKHTGHHVT*KSFSALICASVVSA Trigger: TGCACTCACTACAGATGCACAGATCAAAGCAGAAAAAGATTTTCAGGTGACATGGTGTCCTGTGTGTTTCATAGAATAACTTCTCTCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR TCA 90 bp | CACTGTCAGGGCCAAATTATAAAATCAGCCTTAGGCATGTATCAGTaGATGAATAAGGAAATGTGGTATAGATACACATTCGCGTACTAC | + |
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Preference number: 1 (lower is better) Translates to: HCQGQIIKSALGMYQ*MNKEMWYRYTFAYY Trigger: GTAGTACGCGAATGTGTATCTATACCACATTTCCTTATTCATTCACTGATACATGCCTAAGGCTGATTTTATAATTTGGCCCTGACAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR TCA 90 bp | ATATGGTCCAAGAATGGGATGTGTGAGGAGAATCCTGAGTATTTCTaGGAAAATTTCAAGAAAATAATACACGAGTCTTATGTCCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: IWSKNGMCEENPEYF*ENFKKIIHESYVLS Trigger: ACTGAGGACATAAGACTCGTGTATTATTTTCTTGAAATTTTCTCAGAAATACTCAGGATTCTCCTCACACATCCCATTCTTGGACCATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR TCA 90 bp | ATGGACTTTTCAGATGCTGGACCAAAGAGGACATCGACACTGCTTGCCCATCCCTGTAGATGGGTCTGCTaGAACACAAATTCCTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: MDFSDAGPKRTSTLLAHPCRWVC*NTNSSL Trigger: CAAAGAGGAATTTGTGTTTCAGCAGACCCATCTACA...GGGATGGGCAAGCAGTGTCGATGTCCTCTTTGGTCCAGCATCTGAAAAGTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CAA 90 bp | CAGGATGGCACGAAGTGGACATTTAAAGGCTCTTTGGAAAGTCAGTaGGATGGTGTTTTGCTGGGGCAAACACGTGAAGGAACATTTAGC | + |
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Preference number: 2 (lower is better) Translates to: QDGTKWTFKGSLESQ*DGVLLGQTREGTFS Trigger: GCTAAATGTTCCTTCACGTGTTTGCCCCAGCAAAACACCATCCAACTGACTTTCCAAAGAGCCTTTAAATGTCCACTTCGTGCCATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR TCA 90 bp | GCTAATGGGCAAAAGGAGATACAGACCACATCATCAGAAGTCAAGTCTGCCCACACACCTCTAGAACAGTaGAACCCATGGAGAAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: ANGQKEIQTTSSEVKSAHTPLEQ*NPWRSF Trigger: GAAACTTCTCCATGGGTTTCACTGTTCTAGAGGTGT...GTGGGCAGACTTGACTTCTGATGATGTGGTCTGTATCTCCTTTTGCCCATTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CCA 90 bp | ACTTTTCAGATGCTGGACCAAAGAGGACATCGACACTGCTTGCCCATCCCAGTGTCTGCAGAAGAAAATTaGGAAGGGATATGCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: TFQMLDQRGHRHCLPIPVSAEEN*EGICIC Trigger: ACAGATGCATATCCCTTCCCAATTTTCTTCTGCAGA...CACTGGGATGGGCAAGCAGTGTCGATGTCCTCTTTGGTCCAGCATCTGAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR TCA 90 bp | AGACTCGCACATTCTAACCTCTCTGGTTTTATTGCAGAAGGAAATAAGCAAGCTCTGTGTGCCCCAGTTTaGAGACTAGTGGTTGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RLAHSNLSGFIAEGNKQALCAPV*RLVVEA Trigger: TGCCTCAACCACTAGTCTTCAAACTGGGGCACACAG...AGCTTGCTTATTTCCTTCTGCAATAAAACCAGAGAGGTTAGAATGTGCGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR TCA 90 bp | GCTAATGGGCAAAAGGAGATACAGACCACATCATCAGAAGTCAAGTCTGCCCACGGACACCATGTCACCTaGAAATCTTTTTCTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: ANGQKEIQTTSSEVKSAHGHHVT*KSFSAL Trigger: CAAAGCAGAAAAAGATTTTCAGGTGACATGGTGTCC...GTGGGCAGACTTGACTTCTGATGATGTGGTCTGTATCTCCTTTTGCCCATTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR TCA 90 bp | GCAATCAATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTATTGTTCTTGGAATGTaGTTTTTGTGCTCCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: AINEDSKPRRYPQQLGVSIVLGM*FLCSTQ Trigger: CTGGGTGGAGCACAAAAATCACATTCCAAGAACAAT...AGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCATTGATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CCA 90 bp | AATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTCTATTTCTTTGGAAAGTCAGTTaGATGGTGTTTTGCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: NEDSKPRRYPQQLGVSLFLWKVS*MVFCWG Trigger: GCCCCAGCAAAACACCATCCAACTGACTTTCCAAAG...AAATAGAGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR GCA 90 bp | AGACTCGCACATTCTAACCTCTCTGGTTTTATTGCAGAAGGAAATAAGCAAGCTCTTCAGGTGACTGTGTaGCCCAGTTTGAAGACTAGT | + |
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Preference number: 2 (lower is better) Translates to: RLAHSNLSGFIAEGNKQALQVTV*PSLKTS Trigger: ACTAGTCTTCAAACTGGGGCACACAGTCACCTGAAG...AGCTTGCTTATTTCCTTCTGCAATAAAACCAGAGAGGTTAGAATGTGCGAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR GCA 90 bp | ATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTCTATTTCCTTCGAGTAATGTGTTaGAGTTTCTTGCCACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: MRILNQGVIPSSLEFLYFLRVMC*SFLPLP Trigger: AGGAAGTGGCAAGAAACTGCAACACATTACTCGAAG...GAAATAGAGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR GCA 90 bp | AGTGGAAGTCAGCAGAAAGATAGCAAACCTCCAGCTAATGGGCAAAAGGAGATATTCTGCTTTGATCTGTaGATCTGTAGTGAGTGCATT | + |
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Preference number: 2 (lower is better) Translates to: SGSQQKDSKPPANGQKEIFCFDL*ICSECI Trigger: AATGCACTCACTACAGATGCACAGATCAAAGCAGAA...TATCTCCTTTTGCCCATTAGCTGGAGGTTTGCTATCTTTCTGCTGACTTCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTCTATTTCTTGATTATGTGGCTCTaGAGCGTGAACCTTGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: MRILNQGVIPSSLEFLYFLIMWL*SVNLVN Trigger: ATTTACAAGGTTCACGCTCCAGAGCCACATAATCAA...GAAATAGAGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR TCA 90 bp | ACACCATGTCACCTGAAAATCTTTTTCTGCTTTGATCTGTGCATCTGTAGTGAGCGTGAACCTTGTAAATaGCAATGTCATGTTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: TPCHLKIFFCFDLCICSEREPCK*QCHVAM Trigger: CATGGCAACATGACATTGTCATTTACAAGGTTCACG...CTCACTACAGATGCACAGATCAAAGCAGAAAAAGATTTTCAGGTGACATGGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR TCA 90 bp | AATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTCTATTTCTTCAACTTGTAGATTaGATGAATGCAGCTCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: NEDSKPRRYPQQLGVSLFLQLVD*MNAAPV Trigger: AACAGGAGCTGCATTCATTCAATCTACAAGTTGAAG...AAATAGAGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CCA 90 bp | GCAATCAATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTAGTTTCTTTAGACCATaGAATTGTTCTTGGAATGTG | + |
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Preference number: 2 (lower is better) Translates to: AINEDSKPRRYPQQLGVSSFFRP*NCSWNV Trigger: CACATTCCAAGAACAATTCCATGGTCTAAAGAAACT...AGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCATTGATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTCTATTTCGTTTATATGTCTCTATaGAAAAACATGCTTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: MRILNQGVIPSSLEFLYFVYMSL*KNMLLP Trigger: GGGCAAAAGCATGTTTTTCCATAGAGACATATAAAC...GAAATAGAGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR TCA 90 bp | ACACCATGTCACCTGAAAATCTTTTTCTGCTTTGATCTGTGCATCTGTAGTGAGTATCAGGCTCTAGTCTaGTTCATTTATCAGACCTAT | + |
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Preference number: 2 (lower is better) Translates to: TPCHLKIFFCFDLCICSEYQALV*FIYQTY Trigger: ATAGGTCTGATAAATGAATCAGACTAGAGCCTGATA...CTCACTACAGATGCACAGATCAAAGCAGAAAAAGATTTTCAGGTGACATGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR GCA 90 bp | AGACTCGCACATTCTAACCTCTCTGGTTTTATTGCAGAAGGAAATAAGCAAGCTCTGAAAATCTTTTTCTaGTTTGATCTGTGCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: RLAHSNLSGFIAEGNKQALKIFF*FDLCIC Trigger: ACAGATGCACAGATCAAAGCAGAAAAAGATTTTCAG...AGCTTGCTTATTTCCTTCTGCAATAAAACCAGAGAGGTTAGAATGTGCGAGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CCA 90 bp | AATATTTCCTTTTCCTCAGCCCAACAGGTGAAGCTGCCTATTACAGTTAATTCACCATGGAATTGTTCTTaGAATGTGATTTTTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: NISFSSAQQVKLPITVNSPWNCS*NVIFVL Trigger: GAGCACAAAAATCACATTCCAAGAACAATTCCATGG...TGAATTAACTGTAATAGGCAGCTTCACCTGTTGGGCTGAGGAAAAGGAAATATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR TCA 72 bp | CAGGTGACTGTGTGCCCCAGTTTGAAGACTAGTGGTTaGGGCAAGTCTATCGCTTGGCCCATCTGCAACATG | + |
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Preference number: 3 (lower is better) Translates to: QVTVCPSLKTSG*GKSIAWPICNM Trigger: CATGTTGCAGATGGGCCAAGCGATAGACTTGCCTCAACCACTAGTCTTCAAACTGGGGCACACAGTCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR GCA 72 bp | CTCAACTGGAGACCAGGCCATCTGTACATAGCCCATTaGTCCACATCTACACACATGGCAACACTGTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: LNWRPGHLYIAH*STSTHMATLSG Trigger: CCCTGACAGTGTTGCCATGTGTGTAGATGTGGAGCAATGGGCTATGTACAGATGGCCTGGTCTCCAGTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR GCA 72 bp | AAAGGAGATACAGACCACATCATCAGAAGTCAAGTCTaGCCACCTGGGGCCAAGTTAAGGCCATGTGCACCA | + |
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Preference number: 3 (lower is better) Translates to: KGDTDHIIRSQV*PPGAKLRPCAP Trigger: TGGTGCACATGGCCTTAACTTGGCCCCAGGTGGGCAGACTTGACTTCTGATGATGTGGTCTGTATCTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CCA 72 bp | TACAGACCACATCATCAGAAGTCAAGTCTGCCCACCTaGGGCCAAGTTAAGGCCATGTGCACCAAGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: YRPHHQKSSLPT*GQVKAMCTKRE Trigger: TTCTCTCTTGGTGCACATGGCCTTAACTTGGCCCCAGGTGGGCAGACTTGACTTCTGATGATGTGGTCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CAA 90 bp | AATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTCTATTTAACACAAATTCCTCTTaGGCTCCTCTGGCCCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: NEDSKPRRYPQQLGVSLFNTNSS*APLALG Trigger: GCCAAGGGCCAGAGGAGCCAAAGAGGAATTTGTGTT...AAATAGAGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CAA 90 bp | ACTTTTCAGATGCTGGACCAAAGAGGACATCGACACTGCTTGCCCATCCCAGTGACCTCTCTGGTTTTATaGCAGAAGGAAATAAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: TFQMLDQRGHRHCLPIPVTSLVL*QKEISK Trigger: CTTGCTTATTTCCTTCTGCAATAAAACCAGAGAGGT...CACTGGGATGGGCAAGCAGTGTCGATGTCCTCTTTGGTCCAGCATCTGAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CAA 90 bp | ATGGACTTTTCAGATGCTGGACCAAAGAGGACATCGACACTGCTTGCCCATCCCGTGATGGCAGATTCTTaGCTAACAACATGCATGTAT | + |
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Preference number: 3 (lower is better) Translates to: MDFSDAGPKRTSTLLAHPVMADS*LTTCMY Trigger: ATACATGCATGTTGTTAGCAAAGAATCTGCCATCAC...GGGATGGGCAAGCAGTGTCGATGTCCTCTTTGGTCCAGCATCTGAAAAGTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR TCA 72 bp | GAAGGGATATGCATCTGTCATTGTAGATGGGTCTGCTaGAACACAAATTCCTCTTTGGCTCCTCTGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: EGICICHCRWVC*NTNSSLAPLAL Trigger: AAGGGCCAGAGGAGCCAAAGAGGAATTTGTGTTTCAGCAGACCCATCTACAATGACAGATGCATATCCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR GCA 72 bp | ACTTTTCAGATGCTGGACCAAAGAGGACATCGACACTaGTTGCCCATCCCAGTGTTCTTACATGGATGCAAT | + |
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Preference number: 3 (lower is better) Translates to: TFQMLDQRGHRH*LPIPVFLHGCN Trigger: ATTGCATCCATGTAAGAACACTGGGATGGGCAAGCAGTGTCGATGTCCTCTTTGGTCCAGCATCTGAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CCA 72 bp | ATTGTAGATGGGTCTGCTGAAACACAAATTCCTCTTTaGCTCCTCTGGCCCTTGGCCATTAAGGACAATAGC | + |
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Preference number: 3 (lower is better) Translates to: IVDGSAETQIPL*LLWPLAIKDNS Trigger: GCTATTGTCCTTAATGGCCAAGGGCCAGAGGAGCCAAAGAGGAATTTGTGTTTCAGCAGACCCATCTACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CAA 90 bp | ATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTCTATTTCTCTTTGGAAAGTCAGTaGGATGGTGTTTTGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: MRILNQGVIPSSLEFLYFSLESQ*DGVLLG Trigger: CCCCAGCAAAACACCATCCAACTGACTTTCCAAAGA...GAAATAGAGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CCA 72 bp | CGAAGTGGACATTTAAAGGCTCTTTGGAAAGTCAGTTaGATGGTGTTTTGCTGGGGCAAACACGTGAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: RSGHLKALWKVS*MVFCWGKHVKE Trigger: TTCCTTCACGTGTTTGCCCCAGCAAAACACCATCCAACTGACTTTCCAAAGAGCCTTTAAATGTCCACTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CCA 72 bp | TACAGGATGGCACGAAGTGGACATTTAAAGGCTCTTTaGAAAGTCAGTTGGATGGTGTTTTGCTGGGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: YRMARSGHLKAL*KVSWMVFCWGK Trigger: TTTGCCCCAGCAAAACACCATCCAACTGACTTTCCAAAGAGCCTTTAAATGTCCACTTCGTGCCATCCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CAA 90 bp | GCAATCAATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTTGGAAAAACATGCTTTaGCCCCATGCAGCTTATCTT | + |
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Preference number: 3 (lower is better) Translates to: AINEDSKPRRYPQQLGVSWKNML*PHAAYL Trigger: AAGATAAGCTGCATGGGGCAAAAGCATGTTTTTCCA...AGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCATTGATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CAA 90 bp | ATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTCTATTTCACTTCGAGTAATGTGTaGCAGTTTCTTGCCACTTCC | + |
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Preference number: 3 (lower is better) Translates to: MRILNQGVIPSSLEFLYFTSSNV*QFLATS Trigger: GGAAGTGGCAAGAAACTGCAACACATTACTCGAAGT...GAAATAGAGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CAA 90 bp | GCTAATGGGCAAAAGGAGATACAGACCACATCATCAGAAGTCAAGTCTGCCCACTCTGTAGTGAGTGCATaGAACCTGTGTAATGTATTA | + |
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Preference number: 3 (lower is better) Translates to: ANGQKEIQTTSSEVKSAHSVVSA*NLCNVL Trigger: TAATACATTACACAGGTTCAATGCACTCACTACAGA...GTGGGCAGACTTGACTTCTGATGATGTGGTCTGTATCTCCTTTTGCCCATTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CCA 72 bp | ATTGTTGATATGCATTTTAATGGACTTTTCAGATGCTaGACCAAAGAGGACATCGACACTGCTTGCCCATCC | + |
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Preference number: 3 (lower is better) Translates to: IVDMHFNGLFRC*TKEDIDTACPS Trigger: GGATGGGCAAGCAGTGTCGATGTCCTCTTTGGTCCAGCATCTGAAAAGTCCATTAAAATGCATATCAACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR TCA 72 bp | TCAGTTTCTTTAGACCATGGAATTGTTCTTGGAATGTaGTTTTTGTGCTCCACCCAGCTATGGTGGATAGGA | + |
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Preference number: 3 (lower is better) Translates to: SVSLDHGIVLGM*FLCSTQLWWIG Trigger: TCCTATCCACCATAGCTGGGTGGAGCACAAAAATCACATTCCAAGAACAATTCCATGGTCTAAAGAAACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR GCA 72 bp | ACACACAGGACACCATGTCACCTGAAAATCTTTTTCTaGTTTGATCTGTGCATCTGTAGTGAGTGCATTGAA | + |
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Preference number: 3 (lower is better) Translates to: THRTPCHLKIFF*FDLCICSECIE Trigger: TTCAATGCACTCACTACAGATGCACAGATCAAAGCAGAAAAAGATTTTCAGGTGACATGGTGTCCTGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR GCA 72 bp | AACATTGTTGATATGCATTTTAATGGACTTTTCAGATaGTGGACCAAAGAGGACATCGACACTGCTTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: NIVDMHFNGLFR*WTKEDIDTACP Trigger: TGGGCAAGCAGTGTCGATGTCCTCTTTGGTCCAGCATCTGAAAAGTCCATTAAAATGCATATCAACAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CCA 72 bp | TATGTCCTCAGTTTCTTTAGACCATGGAATTGTTCTTaGAATGTGATTTTTGTGCTCCACCCAGCTATGGTG | + |
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Preference number: 3 (lower is better) Translates to: YVLSFFRPWNCS*NVIFVLHPAMV Trigger: CACCATAGCTGGGTGGAGCACAAAAATCACATTCCAAGAACAATTCCATGGTCTAAAGAAACTGAGGACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CAA 90 bp | AGCAGAAAGATAGCAAACCTCCAGCTAATGGGCAAAAGGAGATACAGACCACATACCATGGAATTGTTCTaGGAATGTGATTTTTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: SRKIANLQLMGKRRYRPHTMELF*ECDFCA Trigger: AGCACAAAAATCACATTCCAAGAACAATTCCATGGT...ATGTGGTCTGTATCTCCTTTTGCCCATTAGCTGGAGGTTTGCTATCTTTCTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CAA 90 bp | AATATTTCCTTTTCCTCAGCCCAACAGGTGAAGCTGCCTATTACAGTTAATTCATGGATAGGAGTGAGTTaGCTTCAGATTGTTTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: NISFSSAQQVKLPITVNSWIGVS*LQIVCH Trigger: ATGGCAAACAATCTGAAGCAAACTCACTCCTATCCA...TGAATTAACTGTAATAGGCAGCTTCACCTGTTGGGCTGAGGAAAAGGAAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR-3UTR CAA 90 bp | CCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTCTATTTCTTTGTTTGACTTTAAAATCTTTTTCTGCTTaGATCTGTGCATCTGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: PRRYPQQLGVSLFLCLTLKSFSA*ICASVV Trigger: CACTACAGATGCACAGATCAAAGCAGAAAAAGATTT...TAAAGTCAAACAAAGAAATAGAGAAACTCCAAGCTGCTGGGGATAACGCCTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR TCA 72 bp | AGTTATTCTATGAAACACACAGGACACCATGTCACCTaGAAATCTTTTTCTGCTTTGATCTGTGCATCTGTA | + |
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Preference number: 3 (lower is better) Translates to: SYSMKHTGHHVT*KSFSALICASV Trigger: TACAGATGCACAGATCAAAGCAGAAAAAGATTTTCAGGTGACATGGTGTCCTGTGTGTTTCATAGAATAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR TCA 72 bp | GGCCAAATTATAAAATCAGCCTTAGGCATGTATCAGTaGATGAATAAGGAAATGTGGTATAGATACACATTC | + |
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Preference number: 3 (lower is better) Translates to: GQIIKSALGMYQ*MNKEMWYRYTF Trigger: GAATGTGTATCTATACCACATTTCCTTATTCATTCACTGATACATGCCTAAGGCTGATTTTATAATTTGGCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR TCA 90 bp | TTTGGCTCCTCTGGCCCTTGGCCATTAAGGACAATAGCGGAGGGCAAGGAGACATGTGGAGTGCAGGGCTaGCCCTGGTGGCCACTATCA | + |
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Preference number: 4 (lower is better) Translates to: FGSSGPWPLRTIAEGKETCGVQG*PWWPLS Trigger: TGATAGTGGCCACCAGGGTCAGCCCTGCACTCCACA...TGTCTCCTTGCCCTCCGCTATTGTCCTTAATGGCCAAGGGCCAGAGGAGCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR GCA 90 bp | TTTGGCTCCTCTGGCCCTTGGCCATTAAGGACAATAGCGGAGGGCAAGGAGACACATTGGAGTGTGGAGTaGAGGGCTGACCCTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: FGSSGPWPLRTIAEGKETHWSVE*RADPGG Trigger: GCCACCAGGGTCAGCCCTGCACTCCACACTCCAATG...TGTCTCCTTGCCCTCCGCTATTGTCCTTAATGGCCAAGGGCCAGAGGAGCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CAA 72 bp | GCTGAAACACAAATTCCTCTTTGGCTCCTCTGGCCCTaGGCCATTAAGGACAATAGCGGAGGGCAAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: AETQIPLWLLWP*AIKDNSGGQGD Trigger: GTCTCCTTGCCCTCCGCTATTGTCCTTAATGGCCAAGGGCCAGAGGAGCCAAAGAGGAATTTGTGTTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR TCA 90 bp | GCTAATGGGCAAAAGGAGATACAGACCACATCATCAGAAGTCAAGTCTGCCCACCACAGAGGAAGTGGCTaGTTTGGTTGGGGCCACACA | + |
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Preference number: 4 (lower is better) Translates to: ANGQKEIQTTSSEVKSAHHRGSG*FGWGHT Trigger: TGTGTGGCCCCAACCAAATCAGCCACTTCCTCTGTG...GTGGGCAGACTTGACTTCTGATGATGTGGTCTGTATCTCCTTTTGCCCATTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR CCA 90 bp | ACTTTTCAGATGCTGGACCAAAGAGGACATCGACACTGCTTGCCCATCCCAGTGAGACACCCTGTAGGTTaGGGTGGTTGGAAAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: TFQMLDQRGHRHCLPIPVRHPVG*GGWKIP Trigger: TGGGATTTTCCAACCACCCCAACCTACAGGGTGTCT...CACTGGGATGGGCAAGCAGTGTCGATGTCCTCTTTGGTCCAGCATCTGAAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR TCA 90 bp | GTGAGTCTCGTCTTGAAACTTGATTATGTGGCTCTGGAGCGTGAACCTTGTAAATATAGGAGCCTGCAGTaGACAGGCAGGGACTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VSLVLKLDYVALEREPCKYRSLQ*TGRDSG Trigger: GCCTGAGTCCCTGCCTGTTCACTGCAGGCTCCTATA...TTTACAAGGTTCACGCTCCAGAGCCACATAATCAAGTTTCAAGACGAGACTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR TCA 90 bp | GCAATCAATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTGCCTTTCTCTTGCCCTaGGTAGAGGGAATCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: AINEDSKPRRYPQQLGVSAFLLP*VEGILR Trigger: CCTGAGGATTCCCTCTACTCAGGGCAAGAGAAAGGC...AGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCATTGATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR TCA 90 bp | GCTAATGGGCAAAAGGAGATACAGACCACATCATCAGAAGTCAAGTCTGCCCACACAAAGAAGAAGATCTaGGAGAGGCAGCCCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: ANGQKEIQTTSSEVKSAHTKKKI*ERQPSK Trigger: CTTTGAGGGCTGCCTCTCTCAGATCTTCTTCTTTGT...GTGGGCAGACTTGACTTCTGATGATGTGGTCTGTATCTCCTTTTGCCCATTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR GCA 90 bp | GTGAGTCTCGTCTTGAAACTTGATTATGTGGCTCTGGAGCGTGAACCTTGTAAACAGTATATAGGAGCCTaGAGTGAACAGGCAGGGACT | + |
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Preference number: 4 (lower is better) Translates to: VSLVLKLDYVALEREPCKQYIGA*SEQAGT Trigger: AGTCCCTGCCTGTTCACTGCAGGCTCCTATATACTG...TTTACAAGGTTCACGCTCCAGAGCCACATAATCAAGTTTCAAGACGAGACTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR CCA 90 bp | CCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTCTATTTCTTTGTTTGACTTTACCCTGTAGGTTGGGGTaGTTGGAAAATCCCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PRRYPQQLGVSLFLCLTLPCRLG*LENPRK Trigger: CTTCCTGGGATTTTCCAACCACCCCAACCTACAGGG...TAAAGTCAAACAAAGAAATAGAGAAACTCCAAGCTGCTGGGGATAACGCCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR CCA 90 bp | TCCACCCAGCTATGGTGGATAGGAGTGAGTTTGCTTCAGATTGTTTGCCATAACTGTGCTCATGAGAACTaGATACCGAAGAGGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: STQLWWIGVSLLQIVCHNCAHEN*IPKRVT Trigger: TGTCACCCTCTTCGGTATCCAGTTCTCATGAGCACA...GTTATGGCAAACAATCTGAAGCAAACTCACTCCTATCCACCATAGCTGGGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CAA 72 bp | GTACAGGATGGCACGAAGTGGACATTTAAAGGCTCTTaGGAAAGTCAGTTGGATGGTGTTTTGCTGGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: VQDGTKWTFKGS*ESQLDGVLLGQ Trigger: TTGCCCCAGCAAAACACCATCCAACTGACTTTCCAAAGAGCCTTTAAATGTCCACTTCGTGCCATCCTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CAA 72 bp | TTTCAGATGCTGGACCAAAGAGGACATCGACACTGCTaGCCCATCCCAGTGTTCTTACATGGATGCAATCAA | + |
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Preference number: 4 (lower is better) Translates to: FQMLDQRGHRHC*PIPVFLHGCNQ Trigger: TTGATTGCATCCATGTAAGAACACTGGGATGGGCAAGCAGTGTCGATGTCCTCTTTGGTCCAGCATCTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CAA 72 bp | ACGAAGTGGACATTTAAAGGCTCTTTGGAAAGTCAGTaGGATGGTGTTTTGCTGGGGCAAACACGTGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: TKWTFKGSLESQ*DGVLLGQTREG Trigger: TCCTTCACGTGTTTGCCCCAGCAAAACACCATCCAACTGACTTTCCAAAGAGCCTTTAAATGTCCACTTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR CCA 90 bp | AGACTCGCACATTCTAACCTCTCTGGTTTTATTGCAGAAGGAAATAAGCAAGCTACATCACAGAGGAAGTaGCTGATTTGGTTGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RLAHSNLSGFIAEGNKQATSQRK*LIWLGP Trigger: TGGCCCCAACCAAATCAGCCACTTCCTCTGTGATGT...AGCTTGCTTATTTCCTTCTGCAATAAAACCAGAGAGGTTAGAATGTGCGAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR CCA 90 bp | TTACTAATGACTCTGCTTATGACTGGACCTGGGGACCATAATAGACTCATTCATGAGCTTCAGGAGCAATaGGACATCACAGAGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LLMTLLMTGPGDHNRLIHELQEQ*DITEEV Trigger: CACTTCCTCTGTGATGTCCCATTGCTCCTGAAGCTC...ATGAATGAGTCTATTATGGTCCCCAGGTCCAGTCATAAGCAGAGTCATTAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR CCA 90 bp | ACACCATGTCACCTGAAAATCTTTTTCTGCTTTGATCTGTGCATCTGTAGTGAGGTGGCACTGGACACATaGAGGACAGATTCATTGACA | + |
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Preference number: 4 (lower is better) Translates to: TPCHLKIFFCFDLCICSEVALDT*RTDSLT Trigger: TGTCAATGAATCTGTCCTCCATGTGTCCAGTGCCAC...CTCACTACAGATGCACAGATCAAAGCAGAAAAAGATTTTCAGGTGACATGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR TCA 90 bp | AGACTCGCACATTCTAACCTCTCTGGTTTTATTGCAGAAGGAAATAAGCAAGCTGGAAGCTCAAGTTGCTaGGGAAATAGTACATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLAHSNLSGFIAEGNKQAGSSSC*GNSTLE Trigger: CTCCAATGTACTATTTCCTCAGCAACTTGAGCTTCC...AGCTTGCTTATTTCCTTCTGCAATAAAACCAGAGAGGTTAGAATGTGCGAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR TCA 90 bp | CTCTGGATGGATATGTGTTTTAAAATAAAGAAGGAGGAGATGTCAGAATATGGTGGAGGACAGATTCATTaGCAGAGGTGTCTGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LWMDMCFKIKKEEMSEYGGGQIH*QRCLSR Trigger: CCTGCTCAGACACCTCTGTCAATGAATCTGTCCTCC...ACCATATTCTGACATCTCCTCCTTCTTTATTTTAAAACACATATCCATCCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| 3UTR CAA 72 bp | TTTTCTGCTTTGATCTGTGCATCTGTAGTGAGTGCATaGAACCTGTGTAATGTATTATGTGACTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSALICASVVSA*NLCNVLCDSSS Trigger: GGAAGATGAGTCACATAATACATTACACAGGTTCAATGCACTCACTACAGATGCACAGATCAAAGCAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS TCA 90 bp | ATTTGGTTGGGGCCACACAGAGTAAGTGTGCTTGTCAATACTGTGTaGGTCACAGAATTCACCAAGCCACAGAGCCAGGATCCAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: IWLGPHRVSVLVNTV*VTEFTKPQSQDPVT Trigger: GGTGACTGGATCCTGGCTCTGTGGCTTGGTGAATTCTGTGACTCACACAGTATTGACAAGCACACTTACTCTGTGTGGCCCCAACCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060912.4 ENSMUST00000199297.4 |
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| CDS-3UTR CAA 90 bp | TCCACCCAGCTATGGTGGATAGGAGTGAGTTTGCTTCAGATTGTTTGCCATAACAAGACACCCTGTAGGTaGGGGTGGTTGGAAAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: STQLWWIGVSLLQIVCHNKTPCR*GWLENP Trigger: GGGATTTTCCAACCACCCCAACCTACAGGGTGTCTT...GTTATGGCAAACAATCTGAAGCAAACTCACTCCTATCCACCATAGCTGGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR CAA 90 bp | GTGAGTCTCGTCTTGAAACTTGATTATGTGGCTCTGGAGCGTGAACCTTGTAAAAAGTGGCTGATTTGGTaGGGGCCACACAGAGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VSLVLKLDYVALEREPCKKWLIW*GPHRVS Trigger: ACTTACTCTGTGTGGCCCCAACCAAATCAGCCACTT...TTTACAAGGTTCACGCTCCAGAGCCACATAATCAAGTTTCAAGACGAGACTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS-3UTR CAA 90 bp | ATGAGGATTCTAAACCAAGGCGTTATCCCCAGCAGCTTGGAGTTTCTCTATTTCTGGAGGACAGATTCATaGACAGAGGTGTCTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MRILNQGVIPSSLEFLYFWRTDS*TEVSEQ Trigger: CTGCTCAGACACCTCTGTCAATGAATCTGTCCTCCA...GAAATAGAGAAACTCCAAGCTGCTGGGGATAACGCCTTGGTTTAGAATCCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199297.4 |
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| CDS CAA 72 bp | ATGGCCAGGAAGGCCAGGAAGAAGACACCCTGTAGGTaGGGGTGGTTGGAAAATCCCAGGAAGATGAATTCT | + |
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Preference number: 6 (lower is better) Translates to: MARKARKKTPCR*GWLENPRKMNS Trigger: AGAATTCATCTTCCTGGGATTTTCCAACCACCCCAACCTACAGGGTGTCTTCTTCCTGGCCTTCCTGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060912.4 ENSMUST00000199297.4 |
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