Pregenerated sensors for OLFR1396 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047511Ensembl transcript IDs: ENSMUST00000060398.3, ENSMUST00000215553.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTGTGTGTGTGTCTCTCTCTCTGTCTCTCTCTCTCTCTCGGATTaGATTCAGCATCCCCCAGACATTCTTCCATCTCACCCACCCCGC | + |
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Preference number: 1 (lower is better) Translates to: LCVCVSLSVSLSLSD*IQHPPDILPSHPPR Trigger: GCGGGGTGGGTGAGATGGAAGAATGTCTGGGGGATGCTGAATTCAATCCGAGAGAGAGAGAGAGACAGAGAGAGAGACACACACACAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR CCA 90 bp | GCTTACACTTCCACATTGCTGTTGATCACCAAAGGAGGTCAGGACTaGAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAAG | + |
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Preference number: 1 (lower is better) Translates to: AYTSTLLLITKGGQD*KQVRKQELMQRPWK Trigger: CTTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTCCAGTCCTGACCTCCTTTGGTGATCAACAGCAATGTGGAAGTGTAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR GCA 90 bp | CCACCTAACAGGCATCAGCAAGAGATCATCAGCAAAGTTAAGTTATaGACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACA | + |
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Preference number: 1 (lower is better) Translates to: PPNRHQQEIISKVKL*TPTQWKFWQLQGHT Trigger: TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAACTTTGCTGATGATCTCTTGCTGATGCCTGTTAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR CCA 90 bp | CATTTCCTCAAGGGAGGCTCTTTTCTCTGTGATAACTCCAGCTTGTaGCAATTTGACACACAAGACCAACCAGTACATCCAGGCAATGCA | + |
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Preference number: 1 (lower is better) Translates to: HFLKGGSFLCDNSSL*QFDTQDQPVHPGNA Trigger: TGCATTGCCTGGATGTACTGGTTGGTCTTGTGTGTCAAATTGCCACAAGCTGGAGTTATCACAGAGAAAAGAGCCTCCCTTGAGGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR CCA 90 bp | CAGCAAGAGATCATCAGCAAAGTTAAGTTATGCACGCCCACACAGTaGAAATTCTGGCAGCTACAAGGACACACAGCTTCTATTTTCACA | + |
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Preference number: 1 (lower is better) Translates to: QQEIISKVKLCTPTQ*KFWQLQGHTASIFT Trigger: TGTGAAAATAGAAGCTGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAACTTTGCTGATGATCTCTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR GCA 90 bp | AAAAACAGAAGTGATAGACACTCACATTTTTGCTATAGGACTGTGTaGATCTACTATAGGACCATGTGCATCCATCATTATAGGACCGTG | + |
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Preference number: 1 (lower is better) Translates to: KNRSDRHSHFCYRTV*IYYRTMCIHHYRTV Trigger: CACGGTCCTATAATGATGGATGCACATGGTCCTATAGTAGATGCACACAGTCCTATAGCAAAAATGTGAGTGTCTATCACTTCTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR GCA 90 bp | AATATGTATGGTTTGATGCTTGCAAAATACGAGGGAGATGTAATGTaGATGAGTTTAACCAGGAACACTTTCTGGAAGAAGAGAATCTGG | + |
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Preference number: 1 (lower is better) Translates to: NMYGLMLAKYEGDVM*MSLTRNTFWKKRIW Trigger: CCAGATTCTCTTCTTCCAGAAAGTGTTCCTGGTTAAACTCATGCACATTACATCTCCCTCGTATTTTGCAAGCATCAAACCATACATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR CAA 90 bp | TCTCTGTGTGTGTGTCTCTCTCTCTGTCTCTCTCTCTCTCTCGGATaGAATTCAGCATCCCCCAGACATTCTTCCATCTCACCCACCCCG | + |
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Preference number: 2 (lower is better) Translates to: SLCVCLSLCLSLSLG*NSASPRHSSISPTP Trigger: CGGGGTGGGTGAGATGGAAGAATGTCTGGGGGATGCTGAATTCAATCCGAGAGAGAGAGAGAGACAGAGAGAGAGACACACACACAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR CAA 90 bp | TCAGCTGGCTGTCTACTAGCCTGTCCCCATGGCAGCACTATGCTTTaGTCTGTCTCTCTGCCTTCTCTGTTTCTCTCCATCTCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SAGCLLACPHGSTML*SVSLPSLFLSISLS Trigger: AGAGAGAGAGATGGAGAGAAACAGAGAAGGCAGAGAGACAGACAAAAGCATAGTGCTGCCATGGGGACAGGCTAGTAGACAGCCAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCTTGGAGATTTCTTTTGGCAATTAGGGTTCCCAGGGAAGGAAGTCCCCCTGATGGGGACAAACAACTaGTGCCTGGCTCAGCACAAT | + |
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Preference number: 2 (lower is better) Translates to: ILGDFFWQLGFPGKEVPLMGTNN*CLAQHN Trigger: ATTGTGCTGAGCCAGGCATCAGTTGTTTGTCCCCAT...CAGGGGGACTTCCTTCCCTGGGAACCCTAATTGCCAAAAGAAATCTCCAAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGTTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACAACAGGCCTCGGTGCCTaGAACTTAAGAGACTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: VKLCTPTQWKFWQLQGHTTGLGA*NLRDSV Trigger: CACAGAGTCTCTTAAGTTCCAGGCACCGAGGCCTGT...TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCTTGGAGATTTCTTTTGGCAATTAGGGTTCCCAGGGAAGGAAGTCCCCCTGGAGCAAGCACCTTCCTaGGGCAAAACTTCCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: ILGDFFWQLGFPGKEVPLEQAPS*GKTSRT Trigger: AGTTCTGGAAGTTTTGCCCCAGGAAGGTGCTTGCTC...CAGGGGGACTTCCTTCCCTGGGAACCCTAATTGCCAAAAGAAATCTCCAAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAGTTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACATGCTGTTGTTCTCCGTaGGCAGAACCTAAGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: VKLCTPTQWKFWQLQGHTCCCSP*AEPKTE Trigger: CTCAGTCTTAGGTTCTGCTCACGGAGAACAACAGCA...TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTATGGGGACAAACAACTaGTGCCTGGCTCAGCACAAT | + |
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Preference number: 2 (lower is better) Translates to: YYSTQAINWAMSSAQSFSMGTNN*CLAQHN Trigger: ATTGTGCTGAGCCAGGCATCAGTTGTTTGTCCCCAT...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGTTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACACAAACAACTGATGCCTaGCTCAGCACAATGGATGTG | + |
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Preference number: 2 (lower is better) Translates to: VKLCTPTQWKFWQLQGHTQTTDA*LSTMDV Trigger: CACATCCATTGTGCTGAGCCAGGCATCAGTTGTTTG...TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR CCA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTTGCACGCCCACACAGTaGAAATTCTGGCAGCTACAA | + |
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Preference number: 2 (lower is better) Translates to: YYSTQAINWAMSSAQSFSCTPTQ*KFWQLQ Trigger: TTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCA...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAGTTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACACTCTGTGAACATCAGTaGGAAGGGTTAAGTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: VKLCTPTQWKFWQLQGHTLCEHQ*EGLSLL Trigger: CAGAAGACTTAACCCTTCTCACTGATGTTCACAGAG...TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAGTTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACAATACAGTCAAAAGTATaGGACAAGAGACCTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: VKLCTPTQWKFWQLQGHTIQSKV*DKRPAV Trigger: CACTGCAGGTCTCTTGTCTCATACTTTTGACTGTAT...TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTATCTGGGACTACAAATCCTCACCTTCACGTACAGGTATCCAAAACTTGTTACAGGCCTCGGTGCCTaGAACTTAAGAGACTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: KYLGLQILTFTYRYPKLVTGLGA*NLRDSV Trigger: CACAGAGTCTCTTAAGTTCCAGGCACCGAGGCCTGT...AACAAGTTTTGGATACCTGTACGTGAAGGTGAGGATTTGTAGTCCCAGATACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCTAGGATTATAGGCATGTACTACTCTACCCAGGCTATCAACTGGGCTATGACACAGTGGAAATTCTaGCAGCTACAAGGACACACA | + |
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Preference number: 2 (lower is better) Translates to: SARIIGMYYSTQAINWAMTQWKF*QLQGHT Trigger: TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGT...CATAGCCCAGTTGATAGCCTGGGTAGAGTAGTACATGCCTATAATCCTAGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCTAGATCAATAATTGAGAAAAATGCCTTACAGCTGGATCTCATGAAGGCATGCTGTTGTTCTCCGTaGGCAGAACCTAAGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: HPRSIIEKNALQLDLMKACCCSP*AEPKTE Trigger: CTCAGTCTTAGGTTCTGCTCACGGAGAACAACAGCA...TGCCTTCATGAGATCCAGCTGTAAGGCATTTTTCTCAATTATTGATCTAGGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAGTTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACACCCTGTAAGGTTCTTTaGAATAAGCATGTTCACTAC | + |
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Preference number: 2 (lower is better) Translates to: VKLCTPTQWKFWQLQGHTPCKVL*NKHVHY Trigger: GTAGTGAACATGCTTATTTCAAAGAACCTTACAGGG...TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATGGGAGGCCACCCTAGATCAATAATTGAGAAAAATGCCTTACAGCTGGATCAGCTTGTGGCAATTTaGCACACAAGACCAACCAGT | + |
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Preference number: 2 (lower is better) Translates to: TMGGHPRSIIEKNALQLDQLVAI*HTRPTS Trigger: ACTGGTTGGTCTTGTGTGTCAAATTGCCACAAGCTG...ATCCAGCTGTAAGGCATTTTTCTCAATTATTGATCTAGGGTGGCCTCCCATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTAGGATTATAGGCATGTACTACTCTACCCAGGCTATCAACTGGGCTATGAGCAAAGTTAAGTTATaGACGCCCACACAGTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SARIIGMYYSTQAINWAMSKVKL*TPTQWK Trigger: TTTCCACTGTGTGGGCGTGCATAACTTAACTTTGCT...CATAGCCCAGTTGATAGCCTGGGTAGAGTAGTACATGCCTATAATCCTAGCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR CCA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTACCAGGAACACTTTCTaGAAGAAGAGAATCTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: YYSTQAINWAMSSAQSFSTRNTF*KKRIWS Trigger: TGACCAGATTCTCTTCTTCCAGAAAGTGTTCCTGGT...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | TTCACAAATCCTTGGAGATTTCTTTTGGCAATTAGGGTTCCCAGGGAAGGAAGTCTCTGTGAACATCAGTaGGAAGGGTTAAGTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FTNPWRFLLAIRVPREGSLCEHQ*EGLSLL Trigger: CAGAAGACTTAACCCTTCTCACTGATGTTCACAGAG...ACTTCCTTCCCTGGGAACCCTAATTGCCAAAAGAAATCTCCAAGGATTTGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTACAAAATGCCTGTTTTaGGAATTTAACTCAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: YYSTQAINWAMSSAQSFSTKCLF*EFNSAG Trigger: GCCAGCTGAGTTAAATTCTCAAAACAGGCATTTTGT...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTTTCTCGGGAGAGGGATaGATTAATTCTACATGTTTC | + |
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Preference number: 2 (lower is better) Translates to: YYSTQAINWAMSSAQSFSFSGEG*INSTCF Trigger: GAAACATGTAGAATTAATTCATCCCTCTCCCGAGAA...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGTTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACATTGCTTTCTGCCATCTaGAAGATTTTTCACTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: VKLCTPTQWKFWQLQGHTLLSAI*KIFHFC Trigger: GCAAAAGTGAAAAATCTTCCAGATGGCAGAAAGCAA...TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACATCCAGGCAATGCAGTGGAAACATAGTATATGCCCTAAAAGATCAGAAAGAGCAAGCACCTTCCTaGGGCAAAACTTCCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: STSRQCSGNIVYALKDQKEQAPS*GKTSRT Trigger: AGTTCTGGAAGTTTTGCCCCAGGAAGGTGCTTGCTC...TTTCTGATCTTTTAGGGCATATACTATGTTTCCACTGCATTGCCTGGATGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR CCA 90 bp | ACAATGGGAGGCCACCCTAGATCAATAATTGAGAAAAATGCCTTACAGCTGGATACACAGTGGAAATTCTaGCAGCTACAAGGACACACA | + |
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Preference number: 2 (lower is better) Translates to: TMGGHPRSIIEKNALQLDTQWKF*QLQGHT Trigger: TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGT...ATCCAGCTGTAAGGCATTTTTCTCAATTATTGATCTAGGGTGGCCTCCCATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR CAA 90 bp | AGAGGAGCCAGAAAGATGTTTAGTACTATAAACACTAAAATCAGTTaGCTGGTTTGGCCTCCACCTAACAGGCATCAGCAAGAGATCATC | + |
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Preference number: 2 (lower is better) Translates to: RGARKMFSTINTKIS*LVWPPPNRHQQEII Trigger: GATGATCTCTTGCTGATGCCTGTTAGGTGGAGGCCAAACCAGCAAACTGATTTTAGTGTTTATAGTACTAAACATCTTTCTGGCTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR CAA 90 bp | CCAGGAACACTTTCTGGAAGAAGAGAATCTGGTCAGATTAAAATTTaGACAAGGCAGATGTTTGGGGTAAGAAGAGAAGAGGAGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: PGTLSGRRESGQIKI*TRQMFGVRREEEPE Trigger: TTCTGGCTCCTCTTCTCTTCTTACCCCAAACATCTGCCTTGTCAAAATTTTAATCTGACCAGATTCTCTTCTTCCAGAAAGTGTTCCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTATCTGGGACTACAAATCCTCACCTTCACGTACAGGTATCCAAAACTTGTTCATTATAGGACCGTGTaGATCCAGTACTCCCATGTT | + |
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Preference number: 2 (lower is better) Translates to: KYLGLQILTFTYRYPKLVHYRTV*IQYSHV Trigger: AACATGGGAGTACTGGATGCACACGGTCCTATAATG...AACAAGTTTTGGATACCTGTACGTGAAGGTGAGGATTTGTAGTCCCAGATACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATGGGAGGCCACCCTAGATCAATAATTGAGAAAAATGCCTTACAGCTGGATACAAAATGCCTGTTTTaGGAATTTAACTCAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: TMGGHPRSIIEKNALQLDTKCLF*EFNSAG Trigger: GCCAGCTGAGTTAAATTCTCAAAACAGGCATTTTGT...ATCCAGCTGTAAGGCATTTTTCTCAATTATTGATCTAGGGTGGCCTCCCATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR GCA 90 bp | AGTACATCCAGGCAATGCAGTGGAAACATAGTATATGCCCTAAAAGATCAGAAACATTATAGGACCGTGTaGATCCAGTACTCCCATGTT | + |
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Preference number: 2 (lower is better) Translates to: STSRQCSGNIVYALKDQKHYRTV*IQYSHV Trigger: AACATGGGAGTACTGGATGCACACGGTCCTATAATG...TTTCTGATCTTTTAGGGCATATACTATGTTTCCACTGCATTGCCTGGATGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACATCCAGGCAATGCAGTGGAAACATAGTATATGCCCTAAAAGATCAGAAAATACAGTCAAAAGTATaGGACAAGAGACCTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: STSRQCSGNIVYALKDQKIQSKV*DKRPAV Trigger: CACTGCAGGTCTCTTGTCTCATACTTTTGACTGTAT...TTTCTGATCTTTTAGGGCATATACTATGTTTCCACTGCATTGCCTGGATGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | TTCACAAATCCTTGGAGATTTCTTTTGGCAATTAGGGTTCCCAGGGAAGGAAGTAAGTTCAAATTTTGCTaGGGTCTTCAACTTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: FTNPWRFLLAIRVPREGSKFKFC*GLQLQE Trigger: CTCTTGAAGTTGAAGACCTCAGCAAAATTTGAACTT...ACTTCCTTCCCTGGGAACCCTAATTGCCAAAAGAAATCTCCAAGGATTTGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCTAGATCAATAATTGAGAAAAATGCCTTACAGCTGGATCTCATGAAGGCACCCTGTAAGGTTCTTTaGAATAAGCATGTTCACTAC | + |
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Preference number: 2 (lower is better) Translates to: HPRSIIEKNALQLDLMKAPCKVL*NKHVHY Trigger: GTAGTGAACATGCTTATTTCAAAGAACCTTACAGGG...TGCCTTCATGAGATCCAGCTGTAAGGCATTTTTCTCAATTATTGATCTAGGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTATCTGGGACTACAAATCCTCACCTTCACGTACAGGTATCCAAAACTTGTTTTCTCGGGAGAGGGATaGATTAATTCTACATGTTTC | + |
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Preference number: 2 (lower is better) Translates to: KYLGLQILTFTYRYPKLVFSGEG*INSTCF Trigger: GAAACATGTAGAATTAATTCATCCCTCTCCCGAGAA...AACAAGTTTTGGATACCTGTACGTGAAGGTGAGGATTTGTAGTCCCAGATACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACATCCAGGCAATGCAGTGGAAACATAGTATATGCCCTAAAAGATCAGAAAGTCAGATTAAAATTTTaGCAAGGCAGATGTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: STSRQCSGNIVYALKDQKVRLKF*QGRCLG Trigger: CCCCAAACATCTGCCTTGTCAAAATTTTAATCTGAC...TTTCTGATCTTTTAGGGCATATACTATGTTTCCACTGCATTGCCTGGATGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR GCA 90 bp | AGTACATCCAGGCAATGCAGTGGAAACATAGTATATGCCCTAAAAGATCAGAAAAGAATTCTAGAATCTTaGTTTCTGCCATCTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: STSRQCSGNIVYALKDQKRILES*FLPSGR Trigger: TCTTCCAGATGGCAGAAAGCAAGATTCTAGAATTCT...TTTCTGATCTTTTAGGGCATATACTATGTTTCCACTGCATTGCCTGGATGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACATCCAGGCAATGCAGTGGAAACATAGTATATGCCCTAAAAGATCAGAAATTGCTTTCTGCCATCTaGAAGATTTTTCACTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: STSRQCSGNIVYALKDQKLLSAI*KIFHFC Trigger: GCAAAAGTGAAAAATCTTCCAGATGGCAGAAAGCAA...TTTCTGATCTTTTAGGGCATATACTATGTTTCCACTGCATTGCCTGGATGTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACATCCAGGCAATGCAGTGGAAACATAGTATATGCCCTAAAAGATCAGAAACAGTGTCTAGATGATTaGGGTTATCTTAAGCATTAT | + |
|
Preference number: 2 (lower is better) Translates to: STSRQCSGNIVYALKDQKQCLDD*GYLKHY Trigger: ATAATGCTTAAGATAACCCCAATCATCTAGACACTG...TTTCTGATCTTTTAGGGCATATACTATGTTTCCACTGCATTGCCTGGATGTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR CCA 72 bp | GATTTCTTACAGAACCCAAGACTGCCAACCCAGGGATaGCATCACCCACAATGGGAGGCCACCCTAGATCAA | + |
|
Preference number: 3 (lower is better) Translates to: DFLQNPRLPTQG*HHPQWEATLDQ Trigger: TTGATCTAGGGTGGCCTCCCATTGTGGGTGATGCCATCCCTGGGTTGGCAGTCTTGGGTTCTGTAAGAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR GCA 72 bp | GGCTTACTTAGCTTGATTTCTTACAGAACCCAAGACTaGCAACCCAGGGATGGCATCACCCACAATGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GLLSLISYRTQD*QPRDGITHNGR Trigger: CCTCCCATTGTGGGTGATGCCATCCCTGGGTTGGCAGTCTTGGGTTCTGTAAGAAATCAAGCTAAGTAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR GCA 72 bp | GTCCCCATGGCAGCACTATGCTTTTGTCTGTCTCTCTaGCTTCTCTGTTTCTCTCCATCTCTCTCTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VPMAALCFCLSL*LLCFSPSLSLS Trigger: AGAGAGAGAGAGAGATGGAGAGAAACAGAGAAGGCAGAGAGACAGACAAAAGCATAGTGCTGCCATGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTAAGTTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACAGGCAGCACTATGCTTTaGTCTGTCTCTCTGCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VKLCTPTQWKFWQLQGHTGSTML*SVSLPS Trigger: AGAAGGCAGAGAGACAGACAAAAGCATAGTGCTGCC...TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR TCA 72 bp | GCCATGGAAGGATGCTATCTACTGGCTTACTTAGCTTaGTTTCTTACAGAACCCAAGACTGCCAACCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: AMEGCYLLAYLA*FLTEPKTANPG Trigger: CCCTGGGTTGGCAGTCTTGGGTTCTGTAAGAAATCAAGCTAAGTAAGCCAGTAGATAGCATCCTTCCATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCTAGGATTATAGGCATGTACTACTCTACCCAGGCTATCAACTGGGCTATGCCTTGGAGATTTCTTTaGGCAATTAGGGTTCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SARIIGMYYSTQAINWAMPWRFL*AIRVPR Trigger: CCTGGGAACCCTAATTGCCAAAAGAAATCTCCAAGG...CATAGCCCAGTTGATAGCCTGGGTAGAGTAGTACATGCCTATAATCCTAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR GCA 72 bp | AGGCATCAGCAAGAGATCATCAGCAAAGTTAAGTTATaGACGCCCACACAGTGGAAATTCTGGCAGCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: RHQQEIISKVKL*TPTQWKFWQLQ Trigger: TTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAACTTTGCTGATGATCTCTTGCTGATGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR CCA 72 bp | ATCATCAGCAAAGTTAAGTTATGCACGCCCACACAGTaGAAATTCTGGCAGCTACAAGGACACACAGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: IISKVKLCTPTQ*KFWQLQGHTAS Trigger: AGAAGCTGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAACTTTGCTGATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACAGCTTCTGTGTCAAGCACCTCATaGTTTATGATTAAACTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LCTPTQWKFWQLQGHTASVSSTS*FMIKLC Trigger: ACACAGTTTAATCATAAACAATGAGGTGCTTGACAC...AGAAGCTGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTAATACAGGCCTCGGTGCCTGGAACTTAAGAGACTCTGTGAACATCAGTGAGGTGTCAAGCACCTCATaGTTTATGATTAAACTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GNTGLGAWNLRDSVNISEVSSTS*FMIKLC Trigger: ACACAGTTTAATCATAAACAATGAGGTGCTTGACAC...CTCACTGATGTTCACAGAGTCTCTTAAGTTCCAGGCACCGAGGCCTGTATTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTTGGAGATTTCTTTTGGCAATTAGGGTTCCCAGGGAAGGAAGTCCCCCTGGAAGATTTTTCACTTTaGCCATTAATGGTGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ILGDFFWQLGFPGKEVPLEDFSL*PLMVSC Trigger: ACAGCTCACCATTAATGGCAAAAGTGAAAAATCTTC...CAGGGGGACTTCCTTCCCTGGGAACCCTAATTGCCAAAAGAAATCTCCAAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTAGATCAATAATTGAGAAAAATGCCTTACAGCTGGATCTCATGAAGGCAGGCAGCACTATGCTTTaGTCTGTCTCTCTGCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: HPRSIIEKNALQLDLMKAGSTML*SVSLPS Trigger: AGAAGGCAGAGAGACAGACAAAAGCATAGTGCTGCC...TGCCTTCATGAGATCCAGCTGTAAGGCATTTTTCTCAATTATTGATCTAGGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR TCA 72 bp | CGGTGCCTGGAACTTAAGAGACTCTGTGAACATCAGTaGGAAGGGTTAAGTCTTCTGGTAAAGAAAACACTC | + |
|
Preference number: 3 (lower is better) Translates to: RCLELKRLCEHQ*EGLSLLVKKTL Trigger: GAGTGTTTTCTTTACCAGAAGACTTAACCCTTCTCACTGATGTTCACAGAGTCTCTTAAGTTCCAGGCACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTAAGAATTCTAGAATCTaGCTTTCTGCCATCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: YYSTQAINWAMSSAQSFSKNSRI*LSAIWK Trigger: CTTCCAGATGGCAGAAAGCAAGATTCTAGAATTCTT...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCTAGGATTATAGGCATGTACTACTCTACCCAGGCTATCAACTGGGCTATGGGTCAGATTAAAATTTaGACAAGGCAGATGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SARIIGMYYSTQAINWAMGQIKI*TRQMFG Trigger: CCCAAACATCTGCCTTGTCAAAATTTTAATCTGACC...CATAGCCCAGTTGATAGCCTGGGTAGAGTAGTACATGCCTATAATCCTAGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTTTCATGAGTTCCAGATaGATAGACATTTGTCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: YYSTQAINWAMSSAQSFSFMSSR*IDICHQ Trigger: TTGGTGACAAATGTCTATCAATCTGGAACTCATGAA...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR GCA 72 bp | GGTTTGATGCTTGCAAAATACGAGGGAGATGTAATGTaGATGAGTTTAACCAGGAACACTTTCTGGAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLMLAKYEGDVM*MSLTRNTFWKK Trigger: CTTCTTCCAGAAAGTGTTCCTGGTTAAACTCATGCACATTACATCTCCCTCGTATTTTGCAAGCATCAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR CCA 72 bp | ATTATAGGCATGTACTACTCTACCCAGGCTATCAACTaGGCTATGTCCTCAGCCCAATCTTTTTCTTATACA | + |
|
Preference number: 3 (lower is better) Translates to: IIGMYYSTQAIN*AMSSAQSFSYT Trigger: TGTATAAGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTACATGCCTATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR GCA 72 bp | TCTCGGGAGAGGGATGAATTAATTCTACATGTTTCGTaGTTATGGATGAAGGGTTCTGGTTGGTACATAATA | + |
|
Preference number: 3 (lower is better) Translates to: SRERDELILHVS*LWMKGSGWYII Trigger: TATTATGTACCAACCAGAACCCTTCATCCATAAGCACGAAACATGTAGAATTAATTCATCCCTCTCCCGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR CCA 72 bp | TTTAGTACTATAAACACTAAAATCAGTTTGCTGGTTTaGCCTCCACCTAACAGGCATCAGCAAGAGATCATC | + |
|
Preference number: 3 (lower is better) Translates to: FSTINTKISLLV*PPPNRHQQEII Trigger: GATGATCTCTTGCTGATGCCTGTTAGGTGGAGGCCAAACCAGCAAACTGATTTTAGTGTTTATAGTACTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTATCTGGGACTACAAATCCTCACCTTCACGTACAGGTATCCAAAACTTGTTGAAGATTTTTCACTTTaGCCATTAATGGTGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KYLGLQILTFTYRYPKLVEDFSL*PLMVSC Trigger: ACAGCTCACCATTAATGGCAAAAGTGAAAAATCTTC...AACAAGTTTTGGATACCTGTACGTGAAGGTGAGGATTTGTAGTCCCAGATACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTAGATCAATAATTGAGAAAAATGCCTTACAGCTGGATCTCATGAAGGCATTCATGAGTTCCAGATaGATAGACATTTGTCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: HPRSIIEKNALQLDLMKAFMSSR*IDICHQ Trigger: TTGGTGACAAATGTCTATCAATCTGGAACTCATGAA...TGCCTTCATGAGATCCAGCTGTAAGGCATTTTTCTCAATTATTGATCTAGGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR CCA 72 bp | AATTCTACATGTTTCGTGCTTATGGATGAAGGGTTCTaGTTGGTACATAATATGTATGGTTTGATGCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NSTCFVLMDEGF*LVHNMYGLMLA Trigger: TGCAAGCATCAAACCATACATATTATGTACCAACCAGAACCCTTCATCCATAAGCACGAAACATGTAGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR CCA 72 bp | GAGAGGGATGAATTAATTCTACATGTTTCGTGCTTATaGATGAAGGGTTCTGGTTGGTACATAATATGTATG | + |
|
Preference number: 3 (lower is better) Translates to: ERDELILHVSCL*MKGSGWYIICM Trigger: CATACATATTATGTACCAACCAGAACCCTTCATCCATAAGCACGAAACATGTAGAATTAATTCATCCCTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR TCA 72 bp | TTGTTAGTGATAATTCTTGTTTTCTCGGGAGAGGGATaGATTAATTCTACATGTTTCGTGCTTATGGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLVIILVFSGEG*INSTCFVLMDE Trigger: TTCATCCATAAGCACGAAACATGTAGAATTAATTCATCCCTCTCCCGAGAAAACAAGAATTATCACTAACAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR GCA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTGCTGGCTGCCAACCCTaGATCGGTCCAGCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YYSTQAINWAMSSAQSFSAGCQP*IGPALS Trigger: AGAAAGGGCTGGACCGATGCAGGGTTGGCAGCCAGC...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR GCA 90 bp | GTTAAGTTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACACGGTCCAGCCCTTTCTaGAGTGCTCCTATCACATCG | + |
|
Preference number: 4 (lower is better) Translates to: VKLCTPTQWKFWQLQGHTRSSPF*SAPITS Trigger: CGATGTGATAGGAGCACTGCAGAAAGGGCTGGACCG...TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR GCA 90 bp | GTTAAGTTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACACTGCACCAGACCATCTaGTATCCCAAAGGCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKLCTPTQWKFWQLQGHTLHQTI*YPKGPR Trigger: TCTTGGGCCTTTGGGATAGCAGATGGTCTGGTGCAG...TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCTAGGATTATAGGCATGTACTACTCTACCCAGGCTATCAACTGGGCTATGCGGTCCAGCCCTTTCTaGAGTGCTCCTATCACATCG | + |
|
Preference number: 4 (lower is better) Translates to: SARIIGMYYSTQAINWAMRSSPF*SAPITS Trigger: CGATGTGATAGGAGCACTGCAGAAAGGGCTGGACCG...CATAGCCCAGTTGATAGCCTGGGTAGAGTAGTACATGCCTATAATCCTAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCTAGGATTATAGGCATGTACTACTCTACCCAGGCTATCAACTGGGCTATGTGTGGGAGGAACAGGTaGCCAGAGCCTTTTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SARIIGMYYSTQAINWAMCGRNR*PEPFSG Trigger: CCCAGAAAAAGGCTCTGGCCACCTGTTCCTCCCACA...CATAGCCCAGTTGATAGCCTGGGTAGAGTAGTACATGCCTATAATCCTAGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR CCA 90 bp | TTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACAGCTTCTGACACCATCTTGTCCTaGCTTGGGGTTCGGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCTPTQWKFWQLQGHTASDTILS*LGVRYC Trigger: ACAATACCGAACCCCAAGCCAGGACAAGATGGTGTC...AGAAGCTGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR TCA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTCCCAAGAGCTCCCAATaGTCTGCAGACAGACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YYSTQAINWAMSSAQSFSPKSSQ*SADRPS Trigger: AGAAGGTCTGTCTGCAGATCATTGGGAGCTCTTGGG...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTTGGAGATTTCTTTTGGCAATTAGGGTTCCCAGGGAAGGAAGTCCCCCTGGGCATTCCCAAACAATaGTGCTGTGAAGACCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILGDFFWQLGFPGKEVPLGIPKQ*CCEDQH Trigger: ATGCTGGTCTTCACAGCAGCATTGTTTGGGAATGCC...CAGGGGGACTTCCTTCCCTGGGAACCCTAATTGCCAAAAGAAATCTCCAAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCTAGGATTATAGGCATGTACTACTCTACCCAGGCTATCAACTGGGCTATGCTGCACCAGACCATCTaGTATCCCAAAGGCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SARIIGMYYSTQAINWAMLHQTI*YPKGPR Trigger: TCTTGGGCCTTTGGGATAGCAGATGGTCTGGTGCAG...CATAGCCCAGTTGATAGCCTGGGTAGAGTAGTACATGCCTATAATCCTAGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR CCA 90 bp | TTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACAGCTTCTATCTCACAGAAGAAGTaGTCCACCTCCCTCAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LCTPTQWKFWQLQGHTASISQKK*STSLKL Trigger: TAGCTTGAGGGAGGTGGACCACTTCTTCTGTGAGAT...AGAAGCTGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR CAA 72 bp | GGCCATGGAAGGATGCTATCTACTGGCTTACTTAGCTaGATTTCTTACAGAACCCAAGACTGCCAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHGRMLSTGLLS*ISYRTQDCQPR Trigger: CCTGGGTTGGCAGTCTTGGGTTCTGTAAGAAATCAAGCTAAGTAAGCCAGTAGATAGCATCCTTCCATGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR GCA 90 bp | GTTAAGTTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACAGGCATTCCCAAACAATaGTGCTGTGAAGACCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKLCTPTQWKFWQLQGHTGIPKQ*CCEDQH Trigger: ATGCTGGTCTTCACAGCAGCATTGTTTGGGAATGCC...TGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAACTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR TCA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTAGACCTTCTGATTCATaGGGACAGGATAGCGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YYSTQAINWAMSSAQSFSRPSDS*GQDSEV Trigger: CACTTCGCTATCCTGTCCTCATGAATCAGAAGGTCT...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR TCA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTTTGGTCTCAGGTAGATaGACATGGCTGCTCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: YYSTQAINWAMSSAQSFSLVSGR*TWLLHR Trigger: TCTATGGAGCAGCCATGTTCATCTACCTGAGACCAA...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCATCTGGAAGATTTTTCACTTTTGCCATTAATGGTGAGCTGTACAATATAGCTGGCTGCCAACCCTaGATCGGTCCAGCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSGRFFTFAINGELYNIAGCQP*IGPALS Trigger: AGAAAGGGCTGGACCGATGCAGGGTTGGCAGCCAGC...TATATTGTACAGCTCACCATTAATGGCAAAAGTGAAAAATCTTCCAGATGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCTAGGATTATAGGCATGTACTACTCTACCCAGGCTATCAACTGGGCTATGATCTCACAGAAGAAGTaGTCCACCTCCCTCAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SARIIGMYYSTQAINWAMISQKK*STSLKL Trigger: TAGCTTGAGGGAGGTGGACCACTTCTTCTGTGAGAT...CATAGCCCAGTTGATAGCCTGGGTAGAGTAGTACATGCCTATAATCCTAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| 3UTR CAA 72 bp | GCTCTTTTCTCTGTGATAACTCCAGCTTGTGGCAATTaGACACACAAGACCAACCAGTACATCCAGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ALFSVITPACGN*THKTNQYIQAM Trigger: CATTGCCTGGATGTACTGGTTGGTCTTGTGTGTCAAATTGCCACAAGCTGGAGTTATCACAGAGAAAAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR TCA 90 bp | AGTACATCCAGGCAATGCAGTGGAAACATAGTATATGCCCTAAAAGATCAGAAACCCAAGAGCTCCCAATaGTCTGCAGACAGACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STSRQCSGNIVYALKDQKPKSSQ*SADRPS Trigger: AGAAGGTCTGTCTGCAGATCATTGGGAGCTCTTGGG...TTTCTGATCTTTTAGGGCATATACTATGTTTCCACTGCATTGCCTGGATGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR TCA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTTATAAGAGGCTACAATaGTGGAGAAGGGAAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YYSTQAINWAMSSAQSFSYKRLQ*WRRETA Trigger: TGCTGTTTCCCTTCTCCATCATTGTAGCCTCTTATA...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
||
| CDS-3UTR TCA 90 bp | TTCACAAATCCTTGGAGATTTCTTTTGGCAATTAGGGTTCCCAGGGAAGGAAGTTTGGTCTCAGGTAGATaGACATGGCTGCTCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTNPWRFLLAIRVPREGSLVSGR*TWLLHR Trigger: TCTATGGAGCAGCCATGTTCATCTACCTGAGACCAA...ACTTCCTTCCCTGGGAACCCTAATTGCCAAAAGAAATCTCCAAGGATTTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| CDS-3UTR GCA 90 bp | AAGTATCTGGGACTACAAATCCTCACCTTCACGTACAGGTATCCAAAACTTGTTGAAGAAAGAGACAGCTaGCATGTGGGAGGAACAGGT | + |
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Preference number: 4 (lower is better) Translates to: KYLGLQILTFTYRYPKLVEERDS*HVGGTG Trigger: ACCTGTTCCTCCCACATGGCAGCTGTCTCTTTCTTC...AACAAGTTTTGGATACCTGTACGTGAAGGTGAGGATTTGTAGTCCCAGATACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| CDS-3UTR CCA 90 bp | TACTACTCTACCCAGGCTATCAACTGGGCTATGTCCTCAGCCCAATCTTTTTCTAAGAAGAAGATCTCTTaGGCTGTAGGAAAAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: YYSTQAINWAMSSAQSFSKKKIS*AVGKDA Trigger: GGCATCTTTTCCTACAGCCCAAGAGATCTTCTTCTT...AGAAAAAGATTGGGCTGAGGACATAGCCCAGTTGATAGCCTGGGTAGAGTAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| CDS-3UTR CCA 90 bp | CACCCTAGATCAATAATTGAGAAAAATGCCTTACAGCTGGATCTCATGAAGGCAGACACCATCTTGTCCTaGCTTGGGGTTCGGTATTGT | + |
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Preference number: 4 (lower is better) Translates to: HPRSIIEKNALQLDLMKADTILS*LGVRYC Trigger: ACAATACCGAACCCCAAGCCAGGACAAGATGGTGTC...TGCCTTCATGAGATCCAGCTGTAAGGCATTTTTCTCAATTATTGATCTAGGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| CDS-3UTR CCA 90 bp | TTCACAAATCCTTGGAGATTTCTTTTGGCAATTAGGGTTCCCAGGGAAGGAAGTAAGAAGAAGATCTCTTaGGCTGTAGGAAAAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: FTNPWRFLLAIRVPREGSKKKIS*AVGKDA Trigger: GGCATCTTTTCCTACAGCCCAAGAGATCTTCTTCTT...ACTTCCTTCCCTGGGAACCCTAATTGCCAAAAGAAATCTCCAAGGATTTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| CDS-3UTR TCA 90 bp | CTGCCATCTGGAAGATTTTTCACTTTTGCCATTAATGGTGAGCTGTACAATATAAGACCTTCTGATTCATaGGGACAGGATAGCGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LPSGRFFTFAINGELYNIRPSDS*GQDSEV Trigger: CACTTCGCTATCCTGTCCTCATGAATCAGAAGGTCT...TATATTGTACAGCTCACCATTAATGGCAAAAGTGAAAAATCTTCCAGATGGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| CDS-3UTR CCA 90 bp | CACCCTAGATCAATAATTGAGAAAAATGCCTTACAGCTGGATCTCATGAAGGCAGGTTCGGTATTGTCTTaGTCTCAGGTAGATGAACAT | + |
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Preference number: 4 (lower is better) Translates to: HPRSIIEKNALQLDLMKAGSVLS*SQVDEH Trigger: ATGTTCATCTACCTGAGACCAAGACAATACCGAACC...TGCCTTCATGAGATCCAGCTGTAAGGCATTTTTCTCAATTATTGATCTAGGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR CAA 72 bp | GATGAAGGGTTCTGGTTGGTACATAATATGTATGGTTaGATGCTTGCAAAATACGAGGGAGATGTAATGTGC | + |
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Preference number: 4 (lower is better) Translates to: DEGFWLVHNMYG*MLAKYEGDVMC Trigger: GCACATTACATCTCCCTCGTATTTTGCAAGCATCAAACCATACATATTATGTACCAACCAGAACCCTTCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR CAA 72 bp | TACAAATCCTCACCTTCACGTACAGGTATCCAAAACTaGTTAGTGATAATTCTTGTTTTCTCGGGAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: YKSSPSRTGIQN*LVIILVFSGEG Trigger: TCCCTCTCCCGAGAAAACAAGAATTATCACTAACAAGTTTTGGATACCTGTACGTGAAGGTGAGGATTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR CAA 72 bp | AGAAAGATGTTTAGTACTATAAACACTAAAATCAGTTaGCTGGTTTGGCCTCCACCTAACAGGCATCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: RKMFSTINTKIS*LVWPPPNRHQQ Trigger: TTGCTGATGCCTGTTAGGTGGAGGCCAAACCAGCAAACTGATTTTAGTGTTTATAGTACTAAACATCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR CAA 72 bp | TGTGCATCCAGTACTCCCATGTTTACCCTATTTCTCTaGAGTAGTACAATGTTCCATTTTTATTCCTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: CASSTPMFTLFL*SSTMFHFYSLK Trigger: CTTCAAGGAATAAAAATGGAACATTGTACTACTCAAGAGAAATAGGGTAAACATGGGAGTACTGGATGCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| 3UTR CAA 72 bp | TCTACATGTTTCGTGCTTATGGATGAAGGGTTCTGGTaGGTACATAATATGTATGGTTTGATGCTTGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: STCFVLMDEGFW*VHNMYGLMLAK Trigger: TTTTGCAAGCATCAAACCATACATATTATGTACCAACCAGAACCCTTCATCCATAAGCACGAAACATGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| CDS-3UTR CAA 90 bp | TTATGCACGCCCACACAGTGGAAATTCTGGCAGCTACAAGGACACACAGCTTCTAAGATAGACACCATCTaGTCCTGGCTTGGGGTTCGG | + |
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Preference number: 5 (lower is better) Translates to: LCTPTQWKFWQLQGHTASKIDTI*SWLGVR Trigger: CCGAACCCCAAGCCAGGACAAGATGGTGTCTATCTT...AGAAGCTGTGTGTCCTTGTAGCTGCCAGAATTTCCACTGTGTGGGCGTGCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| CDS-3UTR CAA 90 bp | GGTAATACAGGCCTCGGTGCCTGGAACTTAAGAGACTCTGTGAACATCAGTGAGAAAGAAGAAGATCTCTaGGGCTGTAGGAAAAGATGC | + |
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Preference number: 5 (lower is better) Translates to: GNTGLGAWNLRDSVNISEKEEDL*GCRKRC Trigger: GCATCTTTTCCTACAGCCCAAGAGATCTTCTTCTTT...CTCACTGATGTTCACAGAGTCTCTTAAGTTCCAGGCACCGAGGCCTGTATTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| CDS-3UTR CAA 90 bp | ACAATGGGAGGCCACCCTAGATCAATAATTGAGAAAAATGCCTTACAGCTGGATGACAAAGAGGCCAATTaGTATGCCACAACCTACGAA | + |
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Preference number: 5 (lower is better) Translates to: TMGGHPRSIIEKNALQLDDKEAN*YATTYE Trigger: TTCGTAGGTTGTGGCATACAAATTGGCCTCTTTGTC...ATCCAGCTGTAAGGCATTTTTCTCAATTATTGATCTAGGGTGGCCTCCCATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| CDS-3UTR CAA 90 bp | CACCCTAGATCAATAATTGAGAAAAATGCCTTACAGCTGGATCTCATGAAGGCAGACAAAGAGGCCAATTaGTATGCCACAACCTACGAA | + |
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Preference number: 5 (lower is better) Translates to: HPRSIIEKNALQLDLMKADKEAN*YATTYE Trigger: TTCGTAGGTTGTGGCATACAAATTGGCCTCTTTGTC...TGCCTTCATGAGATCCAGCTGTAAGGCATTTTTCTCAATTATTGATCTAGGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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| CDS-3UTR CAA 90 bp | CACCCTAGATCAATAATTGAGAAAAATGCCTTACAGCTGGATCTCATGAAGGCAAAAGAAGAAGATCTCTaGGGCTGTAGGAAAAGATGC | + |
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Preference number: 5 (lower is better) Translates to: HPRSIIEKNALQLDLMKAKEEDL*GCRKRC Trigger: GCATCTTTTCCTACAGCCCAAGAGATCTTCTTCTTT...TGCCTTCATGAGATCCAGCTGTAAGGCATTTTTCTCAATTATTGATCTAGGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060398.3 ENSMUST00000215553.2 |
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