Pregenerated sensors for OLFR1393 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059864Ensembl transcript IDs: ENSMUST00000078932.2, ENSMUST00000213323.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCTGACACTCAGGCTTGCCAAGAACCCAGCCCAATTTCACAGGTaGTCACAGTCCACCTCTCCCAGGCTCCTTCTGTGCAAAGTTATA | + |
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Preference number: 1 (lower is better) Translates to: PLTLRLAKNPAQFHR*SQSTSPRLLLCKVI Trigger: TATAACTTTGCACAGAAGGAGCCTGGGAGAGGTGGACTGTGAGCACCTGTGAAATTGGGCTGGGTTCTTGGCAAGCCTGAGTGTCAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR CCA 90 bp | ATGCTCCACACCCATGCACATGCAGGTAACCCTACACAGATCCAGTaGGTCACAAAGTCTATAAAAGGGCAGGAAGTTGTGAGAGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: MLHTHAHAGNPTQIQ*VTKSIKGQEVVRAK Trigger: CTTTGCTCTCACAACTTCCTGCCCTTTTATAGACTTTGTGACCCACTGGATCTGTGTAGGGTTACCTGCATGTGCATGGGTGTGGAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR GCA 90 bp | TTGAGTGCTGCCATTCATAATTTAAATTCCTCTGACACTCAGGCTTaGCAAGAACCCAGCCCAATTTCACAGGTGCTCACAGTCCACCTC | + |
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Preference number: 1 (lower is better) Translates to: LSAAIHNLNSSDTQA*QEPSPISQVLTVHL Trigger: GAGGTGGACTGTGAGCACCTGTGAAATTGGGCTGGGTTCTTGGCAAGCCTGAGTGTCAGAGGAATTTAAATTATGAATGGCAGCACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR TCA 90 bp | GCTCCTTCTGTGCAAAGTTATATCTACGTCTGCATTTATCCTTACTaGGCAGCAATGACAGACAGTAGCCCAGGGAGAAGATCCTCACTC | + |
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Preference number: 1 (lower is better) Translates to: APSVQSYIYVCIYPY*AAMTDSSPGRRSSL Trigger: GAGTGAGGATCTTCTCCCTGGGCTACTGTCTGTCATTGCTGCTCAGTAAGGATAAATGCAGACGTAGATATAACTTTGCACAGAAGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR GCA 90 bp | CAGTTTTTAAGGCAGATGCTAATAGTTCTGCTGGGAGAGATTTGTTaGTTGACTGCAGCAGAAATGACTCTGCCTTCTCCAAGGTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: QFLRQMLIVLLGEIC*LTAAEMTLPSPRWK Trigger: CTTCCACCTTGGAGAAGGCAGAGTCATTTCTGCTGCAGTCAAGCAACAAATCTCTCCCAGCAGAACTATTAGCATCTGCCTTAAAAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR TCA 90 bp | ATCAAACTCAGATCCTCAGGGTTGGCCACAAGTGCCTTAATCCTCTaGGCATCTTGCCATCCTAGGACTGGTTTTCTTGTTGTTTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: IKLRSSGLATSALIL*ASCHPRTGFLVVCF Trigger: AAAACAAACAACAAGAAAACCAGTCCTAGGATGGCAAGATGCTCAGAGGATTAAGGCACTTGTGGCCAACCCTGAGGATCTGAGTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR CCA 90 bp | CTCCAAGGTGGAAGACTAACCCATGTCTCAAATTCACACATTACATaGGGCAGTTCTGCTCACAAAGAATGGAAAGCACGAATGTATGAG | + |
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Preference number: 1 (lower is better) Translates to: LQGGRLTHVSNSHIT*GSSAHKEWKARMYE Trigger: CTCATACATTCGTGCTTTCCATTCTTTGTGAGCAGAACTGCCCCATGTAATGTGTGAATTTGAGACATGGGTTAGTCTTCCACCTTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR TCA 90 bp | CACACACACACACACACACACACACACACTTCTGTGTGGAGGATTTaGTTGTGTCCTTCTAAGATTCAGAATACGGGTATCAAACTCAGA | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHTHTSVWRI*LCPSKIQNTGIKLR Trigger: TCTGAGTTTGATACCCGTATTCTGAATCTTAGAAGGACACAATCAAATCCTCCACACAGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATCCTCAGGGTTGGCCACAAGTGCCTTAATCCTCTGAGCATCTTGCCATCCTGTCTTTTATTTTTGTaGGCATGGACAGCTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: QILRVGHKCLNPLSILPSCLLFL*AWTASC Trigger: GCATGAAGCTGTCCATGCTCACAAAAATAAAAGACA...GGATGGCAAGATGCTCAGAGGATTAAGGCACTTGTGGCCAACCCTGAGGATCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAGGCAGATGCTAATAGTTCTGCTGGGAGAGATTTGTTGCTTGACTGCAGCACTTACTGAGCAGCAATaGCAGACAGTAGCCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LRQMLIVLLGEICCLTAALTEQQ*QTVAQG Trigger: TCCCTGGGCTACTGTCTGTCATTGCTGCTCAGTAAG...TGCTGCAGTCAAGCAACAAATCTCTCCCAGCAGAACTATTAGCATCTGCCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACTGACAGGGAAGGAATCTGGCCAGTTTTTAAGGCAGATGCTAATAGTTCTTTCCCCCTCTTCCAATaGGAAACCCTCTGGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: LTDREGIWPVFKADANSSFPLFQ*ETLWTS Trigger: TGAAGTCCAGAGGGTTTCTCATTGGAAGAGGGGGAA...AGAACTATTAGCATCTGCCTTAAAAACTGGCCAGATTCCTTCCCTGTCAGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR-3UTR GCA 90 bp | CGCCTCACTGACAGGGAAGGAATCTGGCCAGTTTTTAAGGCAGATGCTAATAGTCCCAGGCTCCTTCTGTaGAAAGTTATATCTACGTCT | + |
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Preference number: 2 (lower is better) Translates to: RLTDREGIWPVFKADANSPRLLL*KVISTS Trigger: AGACGTAGATATAACTTTGCACAGAAGGAGCCTGGG...ACTATTAGCATCTGCCTTAAAAACTGGCCAGATTCCTTCCCTGTCAGTGAGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR CAA 90 bp | CCAGTTTTTAAGGCAGATGCTAATAGTTCTGCTGGGAGAGATTTGTaGCTTGACTGCAGCAGAAATGACTCTGCCTTCTCCAAGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PVFKADANSSAGRDL*LDCSRNDSAFSKVE Trigger: TTCCACCTTGGAGAAGGCAGAGTCATTTCTGCTGCAGTCAAGCAACAAATCTCTCCCAGCAGAACTATTAGCATCTGCCTTAAAAACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR CAA 90 bp | TTTTTAAGGCAGATGCTAATAGTTCTGCTGGGAGAGATTTGTTGCTaGACTGCAGCAGAAATGACTCTGCCTTCTCCAAGGTGGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: FLRQMLIVLLGEICC*TAAEMTLPSPRWKT Trigger: AGTCTTCCACCTTGGAGAAGGCAGAGTCATTTCTGCTGCAGTCAAGCAACAAATCTCTCCCAGCAGAACTATTAGCATCTGCCTTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGACAGGGAAGGAATCTGGCCAGTTTTTAAGGCAGATGCTAATAGTTCTGCTAAGGGCAGGAAGTTGTaGGAGCAAAGTGGTTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: TDREGIWPVFKADANSSAKGRKL*EQSGFD Trigger: ATCAAAACCACTTTGCTCTCACAACTTCCTGCCCTT...AGCAGAACTATTAGCATCTGCCTTAAAAACTGGCCAGATTCCTTCCCTGTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR-3UTR GCA 90 bp | CTCACTGACAGGGAAGGAATCTGGCCAGTTTTTAAGGCAGATGCTAATAGTTCTTACATGGGGCAGTTCTaGTCACAAAGAATGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LTDREGIWPVFKADANSSYMGQF*SQRMES Trigger: GCTTTCCATTCTTTGTGAGCAGAACTGCCCCATGTA...AGAACTATTAGCATCTGCCTTAAAAACTGGCCAGATTCCTTCCCTGTCAGTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR-3UTR CCA 90 bp | CGCCTCACTGACAGGGAAGGAATCTGGCCAGTTTTTAAGGCAGATGCTAATAGTCTGCTGGGGAATGTTTaGTTTGGTTTCAAGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: RLTDREGIWPVFKADANSLLGNV*FGFKFC Trigger: ACAAAACTTGAAACCAAACCAAACATTCCCCAGCAG...ACTATTAGCATCTGCCTTAAAAACTGGCCAGATTCCTTCCCTGTCAGTGAGGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR-3UTR TCA 90 bp | AACCCTACACAGATCCAGTGGGTCACAAAGTCTATAAAAGGGCAGGAAGTTGTGTCTGTGTGGAGGATTTaGTTGTGTCCTTCTAAGATT | + |
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Preference number: 2 (lower is better) Translates to: NPTQIQWVTKSIKGQEVVSVWRI*LCPSKI Trigger: AATCTTAGAAGGACACAATCAAATCCTCCACACAGA...CACAACTTCCTGCCCTTTTATAGACTTTGTGACCCACTGGATCTGTGTAGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR CAA 90 bp | CACAAAGTCTATAAAAGGGCAGGAAGTTGTGAGAGCAAAGTGGTTTaGATTAACAGGAACGAAATAGAAAGAAGGAACTGGGTTTGGATT | + |
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Preference number: 2 (lower is better) Translates to: HKVYKRAGSCESKVV*INRNEIERRNWVWI Trigger: AATCCAAACCCAGTTCCTTCTTTCTATTTCGTTCCTGTTAATCAAAACCACTTTGCTCTCACAACTTCCTGCCCTTTTATAGACTTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR-3UTR CAA 90 bp | ATGACGAGGAGTGAAATGGAACCCCAAATCAACTTTGAGATACCTGCTCAAATGCTCAAGCCCTCTGCCTaGGGTCACAGCGTCCACTGT | + |
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Preference number: 3 (lower is better) Translates to: MTRSEMEPQINFEIPAQMLKPSA*GHSVHC Trigger: ACAGTGGACGCTGTGACCCAAGGCAGAGGGCTTGAG...CATTTGAGCAGGTATCTCAAAGTTGATTTGGGGTTCCATTTCACTCCTCGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR CCA 72 bp | ACCCATGCACATGCAGGTAACCCTACACAGATCCAGTaGGTCACAAAGTCTATAAAAGGGCAGGAAGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: THAHAGNPTQIQ*VTKSIKGQEVV Trigger: CACAACTTCCTGCCCTTTTATAGACTTTGTGACCCACTGGATCTGTGTAGGGTTACCTGCATGTGCATGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR TCA 72 bp | ATATCTACGTCTGCATTTATCCTTACTGAGCAGCAATaGCAGACAGTAGCCCAGGGAGAAGATCCTCACTCC | + |
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Preference number: 3 (lower is better) Translates to: ISTSAFILTEQQ*QTVAQGEDPHS Trigger: GGAGTGAGGATCTTCTCCCTGGGCTACTGTCTGTCATTGCTGCTCAGTAAGGATAAATGCAGACGTAGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR GCA 72 bp | GCTAATAGTTCTGCTGGGAGAGATTTGTTGCTTGACTaGAGCAGAAATGACTCTGCCTTCTCCAAGGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: ANSSAGRDLLLD*SRNDSAFSKVE Trigger: TTCCACCTTGGAGAAGGCAGAGTCATTTCTGCTGCAGTCAAGCAACAAATCTCTCCCAGCAGAACTATTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR TCA 72 bp | GTGCAAAGTTATATCTACGTCTGCATTTATCCTTACTaGGCAGCAATGACAGACAGTAGCCCAGGGAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: VQSYIYVCIYPY*AAMTDSSPGRR Trigger: TCTTCTCCCTGGGCTACTGTCTGTCATTGCTGCTCAGTAAGGATAAATGCAGACGTAGATATAACTTTGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR CCA 72 bp | TCACACATTACATGGGGCAGTTCTGCTCACAAAGAATaGAAAGCACGAATGTATGAGGCCTTAAAAACAGGG | + |
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Preference number: 3 (lower is better) Translates to: SHITWGSSAHKE*KARMYEALKTG Trigger: CCCTGTTTTTAAGGCCTCATACATTCGTGCTTTCCATTCTTTGTGAGCAGAACTGCCCCATGTAATGTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR CCA 72 bp | GGAAGACTAACCCATGTCTCAAATTCACACATTACATaGGGCAGTTCTGCTCACAAAGAATGGAAAGCACGA | + |
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Preference number: 3 (lower is better) Translates to: GRLTHVSNSHIT*GSSAHKEWKAR Trigger: TCGTGCTTTCCATTCTTTGTGAGCAGAACTGCCCCATGTAATGTGTGAATTTGAGACATGGGTTAGTCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR TCA 72 bp | ACACACACACACACACACACTTCTGTGTGGAGGATTTaGTTGTGTCCTTCTAAGATTCAGAATACGGGTATC | + |
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Preference number: 3 (lower is better) Translates to: THTHTHTSVWRI*LCPSKIQNTGI Trigger: GATACCCGTATTCTGAATCTTAGAAGGACACAATCAAATCCTCCACACAGAAGTGTGTGTGTGTGTGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGACAGGGAAGGAATCTGGCCAGTTTTTAAGGCAGATGCTAATAGTTCTGCTTGGGGAATGTTTGGTTaGGTTTCAAGTTTTGTGATT | + |
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Preference number: 3 (lower is better) Translates to: TDREGIWPVFKADANSSAWGMFG*VSSFVI Trigger: AATCACAAAACTTGAAACCAAACCAAACATTCCCCA...AGCAGAACTATTAGCATCTGCCTTAAAAACTGGCCAGATTCCTTCCCTGTCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR TCA 90 bp | AGCGTCCACTGTAGGACACAACATGGGGATCTGACTTTGAGTGCTGCCATTCATTCTGCGTGCAGCCACTaGCTTGACCTTCAGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: SVHCRTQHGDLTLSAAIHSACSH*LDLQHR Trigger: GCGGTGCTGAAGGTCAAGTCAGTGGCTGCACGCAGA...ATGAATGGCAGCACTCAAAGTCAGATCCCCATGTTGTGTCCTACAGTGGACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR TCA 90 bp | CAGATCCTCAGGGTTGGCCACAAGTGCCTTAATCCTCTGAGCATCTTGCCATCCAGAAGCCCACCAAAATaGAGCCTCCTCCCAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: QILRVGHKCLNPLSILPSRSPPK*SLLPNW Trigger: CCAGTTTGGGAGGAGGCTTCATTTTGGTGGGCTTCT...GGATGGCAAGATGCTCAGAGGATTAAGGCACTTGTGGCCAACCCTGAGGATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR CAA 72 bp | AGGAGAGATAATCAGAGTGAACTCAAGCCCTCTGCCTaGGGTCACAGCGTCCACTGTAGGACACAACATGGG | + |
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Preference number: 4 (lower is better) Translates to: RRDNQSELKPSA*GHSVHCRTQHG Trigger: CCCATGTTGTGTCCTACAGTGGACGCTGTGACCCAAGGCAGAGGGCTTGAGTTCACTCTGATTATCTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR CCA 90 bp | AGGTCCCACTTGGAGCTGATGCTCCACACCCATGCACATGCAGGTAACCCTACAGTAAGTATGTGTAGGTaGCTGAGCCATAGAACAGAG | + |
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Preference number: 4 (lower is better) Translates to: RSHLELMLHTHAHAGNPTVSMCR*LSHRTE Trigger: CTCTGTTCTATGGCTCAGCCACCTACACATACTTAC...TGTAGGGTTACCTGCATGTGCATGGGTGTGGAGCATCAGCTCCAAGTGGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR CCA 90 bp | CGCCTCACTGACAGGGAAGGAATCTGGCCAGTTTTTAAGGCAGATGCTAATAGTGTTCCTCCTGTGTCCTaGCAGGCCAACTTGAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: RLTDREGIWPVFKADANSVPPVS*QANLRK Trigger: TTTCCTCAAGTTGGCCTGCCAGGACACAGGAGGAAC...ACTATTAGCATCTGCCTTAAAAACTGGCCAGATTCCTTCCCTGTCAGTGAGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR TCA 90 bp | CTCACTGACAGGGAAGGAATCTGGCCAGTTTTTAAGGCAGATGCTAATAGTTCTCATAGGAGCCTAGAATaGGCATGGCAGGCACTGCAA | + |
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Preference number: 4 (lower is better) Translates to: LTDREGIWPVFKADANSSHRSLE*AWQALQ Trigger: TTGCAGTGCCTGCCATGCTCATTCTAGGCTCCTATG...AGAACTATTAGCATCTGCCTTAAAAACTGGCCAGATTCCTTCCCTGTCAGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR TCA 90 bp | AGGAGTGAAATGGAACCCCAAATCAACTTTGAGATACCTGCTCAAATGATAAGTCCTGGCAGGCCAACTTaGGGAAAACAGGCATCTCAC | + |
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Preference number: 4 (lower is better) Translates to: RSEMEPQINFEIPAQMISPGRPT*GKQASH Trigger: GTGAGATGCCTGTTTTCCTCAAGTTGGCCTGCCAGG...ACTTATCATTTGAGCAGGTATCTCAAAGTTGATTTGGGGTTCCATTTCACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR TCA 90 bp | TTAAGGCAGATGCTAATAGTTCTGCTGGGAGAGATTTGTTGCTTGACTGCAGCAATCTCACAGAAGAAGTaGTTCAGTCGATGTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LRQMLIVLLGEICCLTAAISQKK*FSRCPQ Trigger: CTGTGGACATCGACTGAATCACTTCTTCTGTGAGAT...TGCTGCAGTCAAGCAACAAATCTCTCCCAGCAGAACTATTAGCATCTGCCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR CCA 90 bp | TTAAGGCAGATGCTAATAGTTCTGCTGGGAGAGATTTGTTGCTTGACTGCAGCAGGTAGTATAGTGCAGTaGACGACACACAGCAACATA | + |
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Preference number: 4 (lower is better) Translates to: LRQMLIVLLGEICCLTAAGSIVQ*TTHSNI Trigger: TATGTTGCTGTGTGTCGTCCACTGCACTATACTACC...TGCTGCAGTCAAGCAACAAATCTCTCCCAGCAGAACTATTAGCATCTGCCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR TCA 90 bp | AGGAGTGAAATGGAACCCCAAATCAACTTTGAGATACCTGCTCAAATGATAAGTTTCGGGAGAGAGCAATaGTGGCTGTGTTGCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: RSEMEPQINFEIPAQMISFGREQ*WLCCQR Trigger: TCTTTGGCAACACAGCCATCATTGCTCTCTCCCGAA...ACTTATCATTTGAGCAGGTATCTCAAAGTTGATTTGGGGTTCCATTTCACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR TCA 90 bp | ATGACGAGGAGTGAAATGGAACCCCAAATCAACTTTGAGATACCTGCTCAAATGATCATGAGGCCTGTTTaGATCAGAGAGTTCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: MTRSEMEPQINFEIPAQMIMRPV*IREFKK Trigger: CTTCTTGAACTCTCTGATTCAAACAGGCCTCATGAT...CATTTGAGCAGGTATCTCAAAGTTGATTTGGGGTTCCATTTCACTCCTCGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR CCA 90 bp | TGTGGAGGATTTGATTGTGTCCTTCTAAGATTCAGAATACGGGTATCAAACTCACAACAATCACCACTCTaGCCACAAACATCTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CGGFDCVLLRFRIRVSNSQQSPL*PQTSWP Trigger: AGGCCAAGATGTTTGTGGCCAGAGTGGTGATTGTTG...TGAGTTTGATACCCGTATTCTGAATCTTAGAAGGACACAATCAAATCCTCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR CCA 90 bp | GGCCAGTTTTTAAGGCAGATGCTAATAGTTCTGCTGGGAGAGATTTGTTGCTTGCAGAATAGCTGTCTTTaGGTTGTAAGTATGTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GQFLRQMLIVLLGEICCLQNSCL*VVSMCR Trigger: CCTACACATACTTACAACCCAAAGACAGCTATTCTG...CAAGCAACAAATCTCTCCCAGCAGAACTATTAGCATCTGCCTTAAAAACTGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| 3UTR CAA 72 bp | TATAAAAGGGCAGGAAGTTGTGAGAGCAAAGTGGTTTaGATTAACAGGAACGAAATAGAAAGAAGGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: YKRAGSCESKVV*INRNEIERRNW Trigger: CCAGTTCCTTCTTTCTATTTCGTTCCTGTTAATCAAAACCACTTTGCTCTCACAACTTCCTGCCCTTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS-3UTR CAA 90 bp | CAGATCCTCAGGGTTGGCCACAAGTGCCTTAATCCTCTGAGCATCTTGCCATCCTCTTGTCCATGCAGGTaGATGAGGAGCTGGGGCACG | + |
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Preference number: 5 (lower is better) Translates to: QILRVGHKCLNPLSILPSSCPCR*MRSWGT Trigger: CGTGCCCCAGCTCCTCATCAACCTGCATGGACAAGA...GGATGGCAAGATGCTCAGAGGATTAAGGCACTTGTGGCCAACCCTGAGGATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS TCA 90 bp | TTCAGTCGATGTCCACAGAGTGGCATGGCCATCATGAGGCCTGTTTaGATCAGAGAGTTCAAGAAGCCTCCTACCCAGGAAGCAATAGCC | + |
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Preference number: 5 (lower is better) Translates to: FSRCPQSGMAIMRPV*IREFKKPPTQEAIA Trigger: GGCTATTGCTTCCTGGGTAGGAGGCTTCTTGAACTCTCTGATTCAAACAGGCCTCATGATGGCCATGCCACTCTGTGGACATCGACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078932.2 ENSMUST00000213323.2 |
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| CDS TCA 90 bp | AGAAGAAGTGATTCAGTCGATGTCCACAGAGTGGCATGGCCATCATaGGGCCTGTTTGAATCAGAGAGTTCAAGAAGCCTCCTACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RRSDSVDVHRVAWPS*GLFESESSRSLLPR Trigger: CCTGGGTAGGAGGCTTCTTGAACTCTCTGATTCAAACAGGCCTCATGATGGCCATGCCACTCTGTGGACATCGACTGAATCACTTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078932.2 ENSMUST00000213323.2 |
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| CDS-3UTR CAA 90 bp | TCTAAAACCACCATTTCAATGCATGGAAGTAAGCAATTTCATGGGATTCTGATAGCTGATGGTCCTGTCTaGTCCATGCAGGTTGATGAG | + |
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Preference number: 5 (lower is better) Translates to: SKTTISMHGSKQFHGILIADGPV*SMQVDE Trigger: CTCATCAACCTGCATGGACAAGACAGGACCATCAGC...TATCAGAATCCCATGAAATTGCTTACTTCCATGCATTGAAATGGTGGTTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213323.2 |
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| CDS TCA 72 bp | GCCACAAGTCCCAGCAGCCTTTCTGCGTGCAGCCACTaGCTTGACCTTCAGCACCGCCCTAGCAATCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: ATSPSSLSACSH*LDLQHRPSNLC Trigger: GCACAGATTGCTAGGGCGGTGCTGAAGGTCAAGTCAGTGGCTGCACGCAGAAAGGCTGCTGGGACTTGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078932.2 ENSMUST00000213323.2 |
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| CDS CAA 90 bp | AGCATGGCAGGCACTGCAACAATCACCACTCTGGCCACAAACATCTaGGCCTCTGTTCCTCCTGTGTCCTGGCAGGCCAACTTGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SMAGTATITTLATNI*ASVPPVSWQANLRK Trigger: TTTCCTCAAGTTGGCCTGCCAGGACACAGGAGGAACAGAGGCCAAGATGTTTGTGGCCAGAGTGGTGATTGTTGCAGTGCCTGCCATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078932.2 ENSMUST00000213323.2 |
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| CDS CAA 90 bp | ATTCAGTCGATGTCCACAGAGTGGCATGGCCATCATGAGGCCTGTTaGAATCAGAGAGTTCAAGAAGCCTCCTACCCAGGAAGCAATAGC | + |
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Preference number: 6 (lower is better) Translates to: IQSMSTEWHGHHEAC*NQRVQEASYPGSNS Trigger: GCTATTGCTTCCTGGGTAGGAGGCTTCTTGAACTCTCTGATTCAAACAGGCCTCATGATGGCCATGCCACTCTGTGGACATCGACTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078932.2 ENSMUST00000213323.2 |
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| CDS TCA 72 bp | GATTCAGTCGATGTCCACAGAGTGGCATGGCCATCATaGGGCCTGTTTGAATCAGAGAGTTCAAGAAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: DSVDVHRVAWPS*GLFESESSRSL Trigger: GAGGCTTCTTGAACTCTCTGATTCAAACAGGCCTCATGATGGCCATGCCACTCTGTGGACATCGACTGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078932.2 ENSMUST00000213323.2 |
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| CDS CCA 72 bp | CCACAAACTTCCCCTTGCTCTCAGAATAGCTGTCTTTaGGTTGTAAGTATGTGTAGGTGGCTGAGCCATAGA | + |
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Preference number: 6 (lower is better) Translates to: PQTSPCSQNSCL*VVSMCRWLSHR Trigger: TCTATGGCTCAGCCACCTACACATACTTACAACCCAAAGACAGCTATTCTGAGAGCAAGGGGAAGTTTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078932.2 ENSMUST00000213323.2 |
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