Pregenerated sensors for OLFR1391 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000101874Ensembl transcript IDs: ENSMUST00000187509.3, ENSMUST00000215671.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAAGCACAAACATATGTGGTAGCAAAGTCCTGGGCTTTTCAGCATaGAGACCAAGGCAATCAGTGGGAAGGTATGGTAGTCTGAATGAG | + |
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Preference number: 1 (lower is better) Translates to: VSTNICGSKVLGFSA*RPRQSVGRYGSLNE Trigger: CTCATTCAGACTACCATACCTTCCCACTGATTGCCTTGGTCTTCATGCTGAAAAGCCCAGGACTTTGCTACCACATATGTTTGTGCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR TCA 90 bp | CAGAAAAAGAGGCAGGGAACAAGTGCACACCACTACAGTGCTTTGTaGAAGACTTTCTCGAGTCTTTCTTGGGACATAAGAGGTGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: QKKRQGTSAHHYSAL*KTFSSLSWDIRGGD Trigger: ATCTCCACCTCTTATGTCCCAAGAAAGACTCGAGAAAGTCTTTCACAAAGCACTGTAGTGGTGTGCACTTGTTCCCTGCCTCTTTTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR GCA 90 bp | TTTTTCTCAGAAAAAGAGGCAGGGAACAAGTGCACACCACTACAGTaGTTTGTGAAAGACTTTCTCGAGTCTTTCTTGGGACATAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: FFSEKEAGNKCTPLQ*FVKDFLESFLGHKR Trigger: CCTCTTATGTCCCAAGAAAGACTCGAGAAAGTCTTTCACAAAGCACTGTAGTGGTGTGCACTTGTTCCCTGCCTCTTTTTCTGAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR GCA 90 bp | TTGACAATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACGGCAGCGAGCCCTGGTaGCTACTGAGGACATGCTTA | + |
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Preference number: 2 (lower is better) Translates to: LTIPDKYIIQSDYTHPLHGSEPW*LLRTCL Trigger: TAAGCATGTCCTCAGTAGGCACCAGGGCTCGCTGCC...GTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAATTGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGATAAGGAGGTATGGCCATATGGGAGGAGATGTGTCACAAGAGGCAGGTTTGCTCTGTGCATGATCTaGTTATTTTCTCCAAGTATC | + |
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Preference number: 2 (lower is better) Translates to: KDKEVWPYGRRCVTRGRFALCMI*LFSPSI Trigger: GATACTTGGAGAAAATAATCAGATCATGCACAGAGC...AAACCTGCCTCTTGTGACACATCTCCTCCCATATGGCCATACCTCCTTATCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGATAAGGAGGTATGGCCATATGGGAGGAGATGTGTCACAAGAGGCAGGTTTTGCCTACTGAGGACATaGTTAATATTTGTTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: KDKEVWPYGRRCVTRGRFCLLRT*LIFVDS Trigger: GCTGTCAACAAATATTAAGCATGTCCTCAGTAGGCA...AAACCTGCCTCTTGTGACACATCTCCTCCCATATGGCCATACCTCCTTATCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR TCA 90 bp | GCACTCTTCTTCACTCAGTTTACTTTTGAAGGCTGTGTAACAATCAGCACTTACGACAGTGACTTAAAATaGACCATAGGAGCTCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: ALFFTQFTFEGCVTISTYDSDLK*TIGAPC Trigger: GCAAGGAGCTCCTATGGTTCATTTTAAGTCACTGTC...GTAAGTGCTGATTGTTACACAGCCTTCAAAAGTAAACTGAGTGAAGAAGAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTATGGCCATATGGGAGGAGATGTGTCACAAGAGGCAGGTTTTGAAGTTTCTAAATGGCTCTGTGCATaGTCTGATTATTTTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: RYGHMGGDVSQEAGFEVSKWLCA*SDYFLQ Trigger: TTGGAGAAAATAATCAGATCATGCACAGAGCCATTT...AGAAACTTCAAAACCTGCCTCTTGTGACACATCTCCTCCCATATGGCCATACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACAGTGTGCACAACTCCTCAGAGTaGACTCTTCTTCACTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: IPDKYIIQSDYTHPLHSVHNSSE*TLLHSV Trigger: AACTGAGTGAAGAAGAGTGCACTCTGAGGAGTTGTG...CACACTGTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR CCA 90 bp | ACAATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACAGTGTGGTAGCAAAGTCCTaGGCTTTTCAGCATGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: TIPDKYIIQSDYTHPLHSVVAKS*AFQHED Trigger: GTCTTCATGCTGAAAAGCCCAGGACTTTGCTACCAC...ACTGTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR TCA 90 bp | GCACTCTTCTTCACTCAGTTTACTTTTGAAGGCTGTGTAACAATCAGCACTTACTGGGCTCAATTCTCCTaGAGCTATTACAGAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: ALFFTQFTFEGCVTISTYWAQFS*SYYRNK Trigger: TTTGTTTCTGTAATAGCTTCAGGAGAATTGAGCCCA...GTAAGTGCTGATTGTTACACAGCCTTCAAAAGTAAACTGAGTGAAGAAGAGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACAATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACAAGGATAAGGAGGTATaGCCATATGGGAGGAGATGT | + |
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Preference number: 2 (lower is better) Translates to: LTIPDKYIIQSDYTHPLHKDKEV*PYGRRC Trigger: ACATCTCCTCCCATATGGCCATACCTCCTTATCCTT...GTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAATTGTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR TCA 90 bp | GCACTCTTCTTCACTCAGTTTACTTTTGAAGGCTGTGTAACAATCAGCACTTACCTCTGTCTTTTCCAATaGATCTTTTCGTCTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: ALFFTQFTFEGCVTISTYLCLFQ*IFSSSQ Trigger: TTGTGAAGACGAAAAGATTCATTGGAAAAGACAGAG...GTAAGTGCTGATTGTTACACAGCCTTCAAAAGTAAACTGAGTGAAGAAGAGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACAATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACGCAATGACCAGACAGTaGCTTAAAATGAACCATAGG | + |
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Preference number: 2 (lower is better) Translates to: LTIPDKYIIQSDYTHPLHAMTRQ*LKMNHR Trigger: CCTATGGTTCATTTTAAGTCACTGTCTGGTCATTGC...GTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAATTGTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACAATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACCATCACATTAGGATCTaGCTTTGTGAAAAGTCATTC | + |
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Preference number: 2 (lower is better) Translates to: LTIPDKYIIQSDYTHPLHHHIRI*LCEKSF Trigger: GAATGACTTTTCACAAAGTCAGATCCTAATGTGATG...GTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAATTGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR CCA 72 bp | CAGTTGACAAAACTCTTTGGGAAGGATAAGGAGGTATaGCCATATGGGAGGAGATGTGTCACAAGAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QLTKLFGKDKEV*PYGRRCVTRGR Trigger: CCTGCCTCTTGTGACACATCTCCTCCCATATGGCCATACCTCCTTATCCTTCCCAAAGAGTTTTGTCAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR TCA 72 bp | AACATATGTGGTAGCAAAGTCCTGGGCTTTTCAGCATaGAGACCAAGGCAATCAGTGGGAAGGTATGGTAGT | + |
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Preference number: 3 (lower is better) Translates to: NICGSKVLGFSA*RPRQSVGRYGS Trigger: ACTACCATACCTTCCCACTGATTGCCTTGGTCTTCATGCTGAAAAGCCCAGGACTTTGCTACCACATATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR TCA 72 bp | AGGCAGGGAACAAGTGCACACCACTACAGTGCTTTGTaGAAGACTTTCTCGAGTCTTTCTTGGGACATAAGA | + |
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Preference number: 3 (lower is better) Translates to: RQGTSAHHYSAL*KTFSSLSWDIR Trigger: TCTTATGTCCCAAGAAAGACTCGAGAAAGTCTTTCACAAAGCACTGTAGTGGTGTGCACTTGTTCCCTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR GCA 72 bp | AAGGAAGGCAGCGAGCCCTGGTGCCTACTGAGGACATaGTTAATATTTGTTGACAGCTTCATAAATGCACAT | + |
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Preference number: 3 (lower is better) Translates to: KEGSEPWCLLRT*LIFVDSFINAH Trigger: ATGTGCATTTATGAAGCTGTCAACAAATATTAAGCATGTCCTCAGTAGGCACCAGGGCTCGCTGCCTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR GCA 72 bp | GAAAAAGAGGCAGGGAACAAGTGCACACCACTACAGTaGTTTGTGAAAGACTTTCTCGAGTCTTTCTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: EKEAGNKCTPLQ*FVKDFLESFLG Trigger: TCCCAAGAAAGACTCGAGAAAGTCTTTCACAAAGCACTGTAGTGGTGTGCACTTGTTCCCTGCCTCTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR TCA 72 bp | TCCTCAGAGTGCACTCTTCTTCACTCAGTTTACTTTTaGAGGCTGTGTAACAATCAGCACTTACCCACTGCT | + |
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Preference number: 3 (lower is better) Translates to: SSECTLLHSVYF*RLCNNQHLPTA Trigger: AGCAGTGGGTAAGTGCTGATTGTTACACAGCCTTCAAAAGTAAACTGAGTGAAGAAGAGTGCACTCTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACAGTGTGTTACCCCATGTTATCTaGTCTCATCTCTCTGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: IPDKYIIQSDYTHPLHSVLPHVI*SHLSVF Trigger: AAAGACAGAGAGATGAGACAAGATAACATGGGGTAA...CACACTGTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACAGTGTGCACTGTGATAAACTTTaGAAACAGACTCTGAAACAG | + |
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Preference number: 3 (lower is better) Translates to: IPDKYIIQSDYTHPLHSVHCDKL*KQTLKQ Trigger: CTGTTTCAGAGTCTGTTTCAAAAGTTTATCACAGTG...CACACTGTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR TCA 72 bp | ATTGTTGACAATTCCAGACAAGTATATAATACAATCTaGTTACACTCACCCTCTCCACAGTGTGTGTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: IVDNSRQVYNTI*LHSPSPQCVCV Trigger: AACACACACACACTGTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAATTGTCAACAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR TCA 90 bp | CCCTGGTGCCTACTGAGGACATGCTTAATATTTGTTGACAGCTTCATAAATGCACCAGGGCAAGGACACTaGACAGCTGGGCCACACACC | + |
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Preference number: 4 (lower is better) Translates to: PWCLLRTCLIFVDSFINAPGQGH*TAGPHT Trigger: GGTGTGTGGCCCAGCTGTTCAGTGTCCTTGCCCTGG...TGCATTTATGAAGCTGTCAACAAATATTAAGCATGTCCTCAGTAGGCACCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR TCA 90 bp | AGGTATGGCCATATGGGAGGAGATGTGTCACAAGAGGCAGGTTTTGAAGTTTCTTCTGCGACCAGATGTTaGCTTGACCTTCAGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: RYGHMGGDVSQEAGFEVSSATRC*LDLQYS Trigger: GCTGTACTGAAGGTCAAGTCAACATCTGGTCGCAGA...AGAAACTTCAAAACCTGCCTCTTGTGACACATCTCCTCCCATATGGCCATACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR TCA 90 bp | TCAGAAAAAGAGGCAGGGAACAAGTGCACACCACTACAGTGCTTTGTGAAAGACAACTACAAGGAGGTGTaGTCCACACGTCCCAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SEKEAGNKCTPLQCFVKDNYKEV*STRPKS Trigger: GCTTTTGGGACGTGTGGATCACACCTCCTTGTAGTT...GTCTTTCACAAAGCACTGTAGTGGTGTGCACTTGTTCCCTGCCTCTTTTTCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR TCA 90 bp | TCAGAAAAAGAGGCAGGGAACAAGTGCACACCACTACAGTGCTTTGTGAAAGACAAAAGCCCACCAAAATaGAGCCTTTACCCAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: SEKEAGNKCTPLQCFVKDKSPPK*SLYPNW Trigger: CCAGTTTGGGTAAAGGCTTCATTTTGGTGGGCTTTT...GTCTTTCACAAAGCACTGTAGTGGTGTGCACTTGTTCCCTGCCTCTTTTTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR GCA 90 bp | CCCTGGTGCCTACTGAGGACATGCTTAATATTTGTTGACAGCTTCATAAATGCAGATTCAGTCGATACCTaGAGAGAGGCATGGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: PWCLLRTCLIFVDSFINADSVDT*REAWPS Trigger: TGATGGCCATGCCTCTCTGCAGGTATCGACTGAATC...TGCATTTATGAAGCTGTCAACAAATATTAAGCATGTCCTCAGTAGGCACCAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR CCA 90 bp | CCCTGGTGCCTACTGAGGACATGCTTAATATTTGTTGACAGCTTCATAAATGCAACAGCCCTGGCAATGTaGGCATACGATCCTAGAATC | + |
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Preference number: 4 (lower is better) Translates to: PWCLLRTCLIFVDSFINATALAM*AYDPRI Trigger: GATTCTAGGATCGTATGCCCACATTGCCAGGGCTGT...TGCATTTATGAAGCTGTCAACAAATATTAAGCATGTCCTCAGTAGGCACCAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR TCA 90 bp | GCACTCTTCTTCACTCAGTTTACTTTTGAAGGCTGTGTAACAATCAGCACTTACGTTGTGACAGAGCGATaGTGGTGGTGTTGCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: ALFFTQFTFEGCVTISTYVVTER*WWCCQR Trigger: TCTTTGGCAACACCACCATCATCGCTCTGTCACAAC...GTAAGTGCTGATTGTTACACAGCCTTCAAAAGTAAACTGAGTGAAGAAGAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR TCA 90 bp | ACAATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACAGTGAGGCATGGCCATCATaGGACCTGTCTGGATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TIPDKYIIQSDYTHPLHSEAWPS*DLSGSE Trigger: CTCTGATCCAGACAGGTCTCATGATGGCCATGCCTC...ACTGTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR CCA 90 bp | ATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACAGTGTGATATTGATCAGGAGCTaGGGCACGGTGCTTGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: IPDKYIIQSDYTHPLHSVILIRS*GTVLVV Trigger: CACCACAAGCACCGTGCCCCAGCTCCTGATCAATAT...CACACTGTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR CCA 90 bp | CCCTGGTGCCTACTGAGGACATGCTTAATATTTGTTGACAGCTTCATAAATGCAGAGATAGCTAAAGCCTaGCACAGAAGAGGGTGCATA | + |
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Preference number: 4 (lower is better) Translates to: PWCLLRTCLIFVDSFINAEIAKA*HRRGCI Trigger: TATGCACCCTCTTCTGTGCCAGGCTTTAGCTATCTC...TGCATTTATGAAGCTGTCAACAAATATTAAGCATGTCCTCAGTAGGCACCAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR TCA 90 bp | CCCTGGTGCCTACTGAGGACATGCTTAATATTTGTTGACAGCTTCATAAATGCAATCTCACAGAAGAAGTaGTTCAGTCGATACCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PWCLLRTCLIFVDSFINAISQKK*FSRYLQ Trigger: CTGCAGGTATCGACTGAATCACTTCTTCTGTGAGAT...TGCATTTATGAAGCTGTCAACAAATATTAAGCATGTCCTCAGTAGGCACCAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR TCA 90 bp | TCTCCACAGTGTGTGTGTGTTGAGAAACACTACTCTAAACTACTTTACTTTCTACCTTGCAAGCCAACTTaGGGAAGACAGGCATCTCAC | + |
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Preference number: 4 (lower is better) Translates to: SPQCVCVEKHYSKLLYFLPCKPT*GRQASH Trigger: GTGAGATGCCTGTCTTCCTCAAGTTGGCTTGCAAGG...TAGAAAGTAAAGTAGTTTAGAGTAGTGTTTCTCAACACACACACACTGTGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR CAA 72 bp | CTACAGTGCTTTGTGAAAGACTTTCTCGAGTCTTTCTaGGGACATAAGAGGTGGAGATCCTCAGTACTGAAA | + |
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Preference number: 4 (lower is better) Translates to: LQCFVKDFLESF*GHKRWRSSVLK Trigger: TTTCAGTACTGAGGATCTCCACCTCTTATGTCCCAAGAAAGACTCGAGAAAGTCTTTCACAAAGCACTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR TCA 90 bp | TTGACAATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACTCGAATGTCCAGTTGTaGCAGAGCGATGATGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LTIPDKYIIQSDYTHPLHSNVQL*QSDDGG Trigger: ACCACCATCATCGCTCTGTCACAACTGGACATTCGA...GTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAATTGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR GCA 90 bp | GCACTCTTCTTCACTCAGTTTACTTTTGAAGGCTGTGTAACAATCAGCACTTACAAGTACATGGGGGTGTaGAATCGAATGTCCAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: ALFFTQFTFEGCVTISTYKYMGV*NRMSSC Trigger: ACAACTGGACATTCGATTGCACACCCCCATGTACTT...GTAAGTGCTGATTGTTACACAGCCTTCAAAAGTAAACTGAGTGAAGAAGAGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR CCA 90 bp | ATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACAGTGTGATCATGAGACCTGTCTaGATCAGAGAGTTCACGAGG | + |
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Preference number: 4 (lower is better) Translates to: IPDKYIIQSDYTHPLHSVIMRPV*IREFTR Trigger: CCTCGTGAACTCTCTGATCCAGACAGGTCTCATGAT...CACACTGTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR CCA 90 bp | AAGGATAAGGAGGTATGGCCATATGGGAGGAGATGTGTCACAAGAGGCAGGTTTAGAATAACTGTCATTTaGTTGCAAGTACGTGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: KDKEVWPYGRRCVTRGRFRITVI*LQVRVD Trigger: ATCTACACGTACTTGCAACCAAATGACAGTTATTCT...AAACCTGCCTCTTGTGACACATCTCCTCCCATATGGCCATACCTCCTTATCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR GCA 90 bp | GCACTCTTCTTCACTCAGTTTACTTTTGAAGGCTGTGTAACAATCAGCACTTACGATGGTATGATCCTGTaGAGCAATATTGATCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: ALFFTQFTFEGCVTISTYDGMIL*SNIDQE Trigger: CTCCTGATCAATATTGCTGCACAGGATCATACCATC...GTAAGTGCTGATTGTTACACAGCCTTCAAAAGTAAACTGAGTGAAGAAGAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| 3UTR CAA 72 bp | TCTGATTACACTCACCCTCTCCACAGTGTGTGTGTGTaGAGAAACACTACTCTAAACTACTTTACTTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: SDYTHPLHSVCV*RNTTLNYFTFY Trigger: ATAGAAAGTAAAGTAGTTTAGAGTAGTGTTTCTCAACACACACACACTGTGGAGAGGGTGAGTGTAATCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR TCA 90 bp | TCTCCACAGTGTGTGTGTGTTGAGAAACACTACTCTAAACTACTTTACTTTCTAGTACGTGTAGATGGTTaGGCCATAAAACATAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SPQCVCVEKHYSKLLYFLVRVDG*AIKHRN Trigger: GTTTCTATGTTTTATGGCTCAACCATCTACACGTAC...TAGAAAGTAAAGTAGTTTAGAGTAGTGTTTCTCAACACACACACACTGTGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS TCA 90 bp | AGAAGAAGTGATTCAGTCGATACCTGCAGAGAGGCATGGCCATCATaGGACCTGTCTGGATCAGAGAGTTCACGAGGCCTGCTACCCAAG | + |
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Preference number: 5 (lower is better) Translates to: RRSDSVDTCREAWPS*DLSGSESSRGLLPK Trigger: CTTGGGTAGCAGGCCTCGTGAACTCTCTGATCCAGACAGGTCTCATGATGGCCATGCCTCTCTGCAGGTATCGACTGAATCACTTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187509.3 ENSMUST00000215671.2 |
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| CDS CCA 90 bp | TTCAGTCGATACCTGCAGAGAGGCATGGCCATCATGAGACCTGTCTaGATCAGAGAGTTCACGAGGCCTGCTACCCAAGAAGAGATAGCT | + |
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Preference number: 5 (lower is better) Translates to: FSRYLQRGMAIMRPV*IREFTRPATQEEIA Trigger: AGCTATCTCTTCTTGGGTAGCAGGCCTCGTGAACTCTCTGATCCAGACAGGTCTCATGATGGCCATGCCTCTCTGCAGGTATCGACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187509.3 ENSMUST00000215671.2 |
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| CDS-3UTR CAA 90 bp | AAGGATAAGGAGGTATGGCCATATGGGAGGAGATGTGTCACAAGAGGCAGGTTTGCGATGATGGTGGTGTaGCCAAAGAGAGTTAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: KDKEVWPYGRRCVTRGRFAMMVV*PKRVKE Trigger: CTCCTTAACTCTCTTTGGCAACACCACCATCATCGC...AAACCTGCCTCTTGTGACACATCTCCTCCCATATGGCCATACCTCCTTATCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS CCA 90 bp | GGGCATACGATCCTAGAATCAATGTTGCTGGGAATACCAAGATTATaGCTCTCGCCACAAACATCTTGGCCTCTGTTCCAGCTGTATCCT | + |
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Preference number: 5 (lower is better) Translates to: GHTILESMLLGIPRL*LSPQTSWPLFQLYP Trigger: AGGATACAGCTGGAACAGAGGCCAAGATGTTTGTGGCGAGAGCCATAATCTTGGTATTCCCAGCAACATTGATTCTAGGATCGTATGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187509.3 ENSMUST00000215671.2 |
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| CDS CCA 90 bp | CTGCGACCAGATGTTGACTTGACCTTCAGTACAGCCCTGGCAATGTaGGCATACGATCCTAGAATCAATGTTGCTGGGAATACCAAGATT | + |
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Preference number: 5 (lower is better) Translates to: LRPDVDLTFSTALAM*AYDPRINVAGNTKI Trigger: AATCTTGGTATTCCCAGCAACATTGATTCTAGGATCGTATGCCCACATTGCCAGGGCTGTACTGAAGGTCAAGTCAACATCTGGTCGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187509.3 ENSMUST00000215671.2 |
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| CDS-3UTR CAA 90 bp | GCACTCTTCTTCACTCAGTTTACTTTTGAAGGCTGTGTAACAATCAGCACTTACTCCTGTGCAGCAATATaGATCAGGAGCTGGGGCACG | + |
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Preference number: 5 (lower is better) Translates to: ALFFTQFTFEGCVTISTYSCAAI*IRSWGT Trigger: CGTGCCCCAGCTCCTGATCAATATTGCTGCACAGGA...GTAAGTGCTGATTGTTACACAGCCTTCAAAAGTAAACTGAGTGAAGAAGAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACAGTGTGCTCGCCACAAACATCTaGGCCTCTGTTCCAGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: IPDKYIIQSDYTHPLHSVLATNI*ASVPAV Trigger: TACAGCTGGAACAGAGGCCAAGATGTTTGTGGCGAG...CACACTGTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAGACAAGTATATAATACAATCTGATTACACTCACCCTCTCCACAGTGTGTCCTTGCAAGCCAACTaGAGGAAGACAGGCATCTCA | + |
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Preference number: 5 (lower is better) Translates to: IPDKYIIQSDYTHPLHSVSLQAN*RKTGIS Trigger: TGAGATGCCTGTCTTCCTCAAGTTGGCTTGCAAGGA...CACACTGTGGAGAGGGTGAGTGTAATCAGATTGTATTATATACTTGTCTGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215671.2 |
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| CDS TCA 72 bp | GATTCAGTCGATACCTGCAGAGAGGCATGGCCATCATaGGACCTGTCTGGATCAGAGAGTTCACGAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: DSVDTCREAWPS*DLSGSESSRGL Trigger: CAGGCCTCGTGAACTCTCTGATCCAGACAGGTCTCATGATGGCCATGCCTCTCTGCAGGTATCGACTGAATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187509.3 ENSMUST00000215671.2 |
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| CDS GCA 72 bp | GGCCACACACCTTCCATAGGTGATGGTATGATCCTGTaGAGCAATATTGATCAGGAGCTGGGGCACGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: GHTPSIGDGMIL*SNIDQELGHGA Trigger: AGCACCGTGCCCCAGCTCCTGATCAATATTGCTGCACAGGATCATACCATCACCTATGGAAGGTGTGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187509.3 ENSMUST00000215671.2 |
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| CDS CCA 72 bp | TACCTGCAGAGAGGCATGGCCATCATGAGACCTGTCTaGATCAGAGAGTTCACGAGGCCTGCTACCCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: YLQRGMAIMRPV*IREFTRPATQE Trigger: TTCTTGGGTAGCAGGCCTCGTGAACTCTCTGATCCAGACAGGTCTCATGATGGCCATGCCTCTCTGCAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187509.3 ENSMUST00000215671.2 |
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| CDS CAA 72 bp | GGGAATACCAAGATTATGGCTCTCGCCACAAACATCTaGGCCTCTGTTCCAGCTGTATCCTTGCAAGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: GNTKIMALATNI*ASVPAVSLQAN Trigger: GTTGGCTTGCAAGGATACAGCTGGAACAGAGGCCAAGATGTTTGTGGCGAGAGCCATAATCTTGGTATTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187509.3 ENSMUST00000215671.2 |
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| CDS TCA 72 bp | GGGTGTGCAATCGAATGTCCAGTTGTGACAGAGCGATaGTGGTGGTGTTGCCAAAGAGAGTTAAGGAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GCAIECPVVTER*WWCCQRELRSR Trigger: TCTACTCCTTAACTCTCTTTGGCAACACCACCATCATCGCTCTGTCACAACTGGACATTCGATTGCACACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187509.3 ENSMUST00000215671.2 |
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| CDS CAA 90 bp | AATGTTGCTGGGAATACCAAGATTATGGCTCTCGCCACAAACATCTaGGCCTCTGTTCCAGCTGTATCCTTGCAAGCCAACTTGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: NVAGNTKIMALATNI*ASVPAVSLQANLRK Trigger: CTTCCTCAAGTTGGCTTGCAAGGATACAGCTGGAACAGAGGCCAAGATGTTTGTGGCGAGAGCCATAATCTTGGTATTCCCAGCAACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187509.3 ENSMUST00000215671.2 |
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| CDS CCA 72 bp | ATCCTAGAATCAATGTTGCTGGGAATACCAAGATTATaGCTCTCGCCACAAACATCTTGGCCTCTGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ILESMLLGIPRL*LSPQTSWPLFQ Trigger: CTGGAACAGAGGCCAAGATGTTTGTGGCGAGAGCCATAATCTTGGTATTCCCAGCAACATTGATTCTAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187509.3 ENSMUST00000215671.2 |
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