RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1385 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059729

Ensembl transcript IDs: ENSMUST00000071807.2, ENSMUST00000214948.2

Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGATTTCCAGAGTGGTTGTACAAGCCTGCACTCCCACCAACAATaGAGGAGTGTTCCTCTTTCTCCACATCCACGCCAGCATCTGCTG +
Preference number: 1 (lower is better)
Translates to: TDFQSGCTSLHSHQQ*RSVPLSPHPRQHLL
Trigger: CAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR GCA 90 bp TGGAGCATGTGTCCTTCTTACCAGTTGGGGCATCTTCTGGATATATaGCCAGGAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCA +
Preference number: 1 (lower is better)
Translates to: WSMCPSYQLGHLLDI*PGEVLLDPPVVLCP
Trigger: TGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR TCA 90 bp CTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTaGTGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTC +
Preference number: 1 (lower is better)
Translates to: LGHIKFASPMGLSFQ*WPTRPSFDIYAARV
Trigger: GACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR TCA 90 bp AAAGATCTTGACTTCCAGCTCCCAAAGAGGAAAGCAACAAAAATCTaGGAGTTGCTGCAGGCTATTCCTTGGTCAGTAGAACAGGGTAGA +
Preference number: 1 (lower is better)
Translates to: KDLDFQLPKRKATKI*ELLQAIPWSVEQGR
Trigger: TCTACCCTGTTCTACTGACCAAGGAATAGCCTGCAGCAACTCTCAGATTTTTGTTGCTTTCCTCTTTGGGAGCTGGAAGTCAAGATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR CCA 90 bp CATCTTTTGATATATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTaGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCGGATCCCT +
Preference number: 1 (lower is better)
Translates to: HLLIYMQLESRAPGY*LVHNVVPPIGLRIP
Trigger: AGGGATCCGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATATATCAAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR GCA 90 bp AATCTGAAGACTGCCCAACTCCACATCTCTTCACTATCTCATCTCTaGTGTTACTCCCTCATTCTTTTAAACCATGTTACTCTACCCTTT +
Preference number: 1 (lower is better)
Translates to: NLKTAQLHISSLSHL*CYSLILLNHVTLPF
Trigger: AAAGGGTAGAGTAACATGGTTTAAAAGAATGAGGGAGTAACAGCAGAGATGAGATAGTGAAGAGATGTGGAGTTGGGCAGTCTTCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR GCA 90 bp TTAGGAAACATTGCAGTGATCATTGTTCTATGCTTATGGGCAAAGTaGCATCAACATGACATACATTTGGGAATCACTGGCTTTAGAAAA +
Preference number: 1 (lower is better)
Translates to: LGNIAVIIVLCLWAK*HQHDIHLGITGFRK
Trigger: TTTTCTAAAGCCAGTGATTCCCAAATGTATGTCATGTTGATGGCACTTTGCCCATAAGCATAGAACAATGATCACTGCAATGTTTCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR CCA 90 bp TTGTTCTATGCTTATGGGCAAAGTGCCATCAACATGACATACATTTaGGAATCACTGGCTTTAGAAAAGGGGTGTAACATTCAATTAACT +
Preference number: 1 (lower is better)
Translates to: LFYAYGQSAINMTYI*ESLALEKGCNIQLT
Trigger: AGTTAATTGAATGTTACACCCCTTTTCTAAAGCCAGTGATTCCCAAATGTATGTCATGTTGATGGCACTTTGCCCATAAGCATAGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR GCA 90 bp CATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACAAAATCTGAGAGTTGCTaGAGGCTATTCCTTGGTCAG +
Preference number: 2 (lower is better)
Translates to: HPLLCLLGPGIVSQETATKSESC*RLFLGQ
Trigger: CTGACCAAGGAATAGCCTGCAGCAACTCTCAGATTT...TGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR GCA 90 bp CCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCACGCCAGCATCTGCTATAGAATCTGAAGACTaGCCAACTCCACATCTCTTC +
Preference number: 2 (lower is better)
Translates to: PPTMEECSSFSTSTPASAIESED*PTPHLF
Trigger: GAAGAGATGTGGAGTTGGGCAGTCTTCAGATTCTAT...AGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR TCA 90 bp TTGTGTGAGTTTCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGAGGTGTGATAGAATCTaGAGACTGCCCAACTCCACA +
Preference number: 2 (lower is better)
Translates to: LCEFLCECVTSLRMMPSRRCDRI*RLPNST
Trigger: TGTGGAGTTGGGCAGTCTTCAGATTCTATCACACCT...CCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACTCACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR GCA 90 bp TCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGCTTATGGGCAAAGTaGCATCAACATGACATACAT +
Preference number: 2 (lower is better)
Translates to: STSVFARPRHSLTRDSYICLWAK*HQHDIH
Trigger: ATGTATGTCATGTTGATGGCACTTTGCCCATAAGCA...GATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR CCA 90 bp CCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTCTGCACTCCCACCAACAATaGAGGAGTGTTCCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: PFISAPNFVSVTPSMGVLHSHQQ*RSVPLS
Trigger: AGAAAGAGGAACACTCCTCCATTGTTGGTGGGAGTG...CAGAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR TCA 90 bp CCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTCTGGCATCTGCTGTCACCTaGATTTTTGATCTTAGCCAT +
Preference number: 2 (lower is better)
Translates to: PFISAPNFVSVTPSMGVLASAVT*IFDLSH
Trigger: ATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGC...CAGAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR TCA 90 bp CTACATCTGGGTCCTTTCAATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGAAAGCAACAAAAATCTaGGAGTTGCTGCAGGCTATT +
Preference number: 2 (lower is better)
Translates to: LHLGPFNKILLVYAMVSAKATKI*ELLQAI
Trigger: AATAGCCTGCAGCAACTCTCAGATTTTTGTTGCTTT...CGCTGACACCATTGCATACACTAGCAAGATTTTATTGAAAGGACCCAGATGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR GCA 90 bp TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCGGATCCCTTTAGCTTCACTATCTCATCTCTaGTGTTACTCCCTCATTCTT +
Preference number: 2 (lower is better)
Translates to: YWLVHNVVPPIGLRIPLASLSHL*CYSLIL
Trigger: AAGAATGAGGGAGTAACAGCAGAGATGAGATAGTGA...AGCTAAAGGGATCCGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR CCA 72 bp CAGAGTGGTTGTACAAGCCTGCACTCCCACCAACAATaGAGGAGTGTTCCTCTTTCTCCACATCCACGCCAG +
Preference number: 3 (lower is better)
Translates to: QSGCTSLHSHQQ*RSVPLSPHPRQ
Trigger: CTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR GCA 72 bp TGTCCTTCTTACCAGTTGGGGCATCTTCTGGATATATaGCCAGGAGAGGTATTGCTGGATCCTCCGGTAGTA +
Preference number: 3 (lower is better)
Translates to: CPSYQLGHLLDI*PGEVLLDPPVV
Trigger: TACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR CCA 72 bp TTATGGGGTGGATCCCTGGATATGGCAGTCTCTACATaGCCCATCCTTTCATCTCAGCTCCAAACTTTGTCT +
Preference number: 3 (lower is better)
Translates to: LWGGSLDMAVST*PILSSQLQTLS
Trigger: AGACAAAGTTTGGAGCTGAGATGAAAGGATGGGCCATGTAGAGACTGCCATATCCAGGGATCCACCCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR CAA 90 bp CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCCTGCACTCCCACGGAAGTATCTTCACCTaGGTAACAAACAAATCTGTT +
Preference number: 3 (lower is better)
Translates to: LRNRQTDFQSGCTSLHSHGSIFT*VTNKSV
Trigger: AACAGATTTGTTTGTTACCAAGGTGAAGATACTTCC...GTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR TCA 72 bp TTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTaGGGAACCGCCAGACTGATTTCCAGAGTGGTTGTA +
Preference number: 3 (lower is better)
Translates to: LLDPPVVLCPIF*GTARLISRVVV
Trigger: TACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR CAA 90 bp TTGTGTGAGTTTCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGGAAGTTAAAAAGATCTaGACTTCCAGCTCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: LCEFLCECVTSLRMMPSREVKKI*TSSSQR
Trigger: TCTTTGGGAGCTGGAAGTCAAGATCTTTTTAACTTC...CCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACTCACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR CAA 90 bp TTGTGTGAGTTTCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGGAAATTCCTGCACATTaGTTTTGTTCTCTGCATGTG +
Preference number: 3 (lower is better)
Translates to: LCEFLCECVTSLRMMPSREIPAH*FCSLHV
Trigger: CACATGCAGAGAACAAAACAAATGTGCAGGAATTTC...CCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACTCACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR TCA 72 bp GTAGATGTACCACATTTTCTGTATTCATTCCTCTGTTaGGGGGCATCTAGGTTCTTTCCAGCTTCTGGCTAT +
Preference number: 3 (lower is better)
Translates to: VDVPHFLYSFLC*GASRFFPASGY
Trigger: ATAGCCAGAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGAATACAGAAAATGTGGTACATCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR TCA 72 bp ATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTaGTGGCCGACTAGGCCATCTTTTGATATATATGCA +
Preference number: 3 (lower is better)
Translates to: IKFASPMGLSFQ*WPTRPSFDIYA
Trigger: TGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR CAA 90 bp TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCGGATCCCTTTAGCTTCCTGCACATTTGTTTaGTTCTCTGCATGTGATGAG +
Preference number: 3 (lower is better)
Translates to: YWLVHNVVPPIGLRIPLASCTFV*FSACDE
Trigger: CTCATCACATGCAGAGAACAAAACAAATGTGCAGGA...AGCTAAAGGGATCCGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR CAA 90 bp CCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTCTGCAGTCTTCATTCTTCTaGAGTTTCATGTGTTTAGCA +
Preference number: 3 (lower is better)
Translates to: PFISAPNFVSVTPSMGVLQSSFF*SFMCLA
Trigger: TGCTAAACACATGAAACTCAAGAAGAATGAAGACTG...CAGAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR GCA 72 bp ATTGCAGTGATCATTGTTCTATGCTTATGGGCAAAGTaGCATCAACATGACATACATTTGGGAATCACTGGC +
Preference number: 3 (lower is better)
Translates to: IAVIIVLCLWAK*HQHDIHLGITG
Trigger: GCCAGTGATTCCCAAATGTATGTCATGTTGATGGCACTTTGCCCATAAGCATAGAACAATGATCACTGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR GCA 72 bp ACTGCCCAACTCCACATCTCTTCACTATCTCATCTCTaGTGTTACTCCCTCATTCTTTTAAACCATGTTACT +
Preference number: 3 (lower is better)
Translates to: TAQLHISSLSHL*CYSLILLNHVT
Trigger: AGTAACATGGTTTAAAAGAATGAGGGAGTAACAGCAGAGATGAGATAGTGAAGAGATGTGGAGTTGGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR CCA 72 bp GCTTATGGGCAAAGTGCCATCAACATGACATACATTTaGGAATCACTGGCTTTAGAAAAGGGGTGTAACATT +
Preference number: 3 (lower is better)
Translates to: AYGQSAINMTYI*ESLALEKGCNI
Trigger: AATGTTACACCCCTTTTCTAAAGCCAGTGATTCCCAAATGTATGTCATGTTGATGGCACTTTGCCCATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR-3UTR CAA 90 bp TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCGGATCCCTTTAGCTCAACATGACATACATTaGGGAATCACTGGCTTTAGA +
Preference number: 3 (lower is better)
Translates to: YWLVHNVVPPIGLRIPLAQHDIH*GITGFR
Trigger: TCTAAAGCCAGTGATTCCCAAATGTATGTCATGTTG...AGCTAAAGGGATCCGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR CAA 72 bp TGTTCCACCTATAGGGTTGCGGATCCCTTTAGCTCCTaGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: CSTYRVADPFSS*ATFSSSSIGSP
Trigger: AGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCCGCAACCCTATAGGTGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR TCA 90 bp TCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTTTGGGAGAGAGCGATaGTGGCGGTGTTGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: STSVFARPRHSLTRDSYIFGRER*WRCCQR
Trigger: TCTTTGGCAACACCGCCATCATCGCTCTCTCCCAAA...GATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR TCA 90 bp GGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCCTGCACTCCCACCAACGTCCATGAAGATTTATaGGAAGCTGTGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: GTARLISRVVVQACTPTNVHEDL*EAVAQC
Trigger: GCACTGTGCCACAGCTTCTCATAAATCTTCATGGAC...GTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR TCA 90 bp TGTAACTCCTTCCATGGGTGTTCTGTTCCCAAATCTAAGGAGGGGCATAGTGTCGCAAGAGCCAATGCCTaGCAGAGAAGGGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: CNSFHGCSVPKSKEGHSVARANA*QRRGCM
Trigger: CATGCACCCCCTTCTCTGTCAGGCATTGGCTCTTGC...GACACTATGCCCCTCCTTAGATTTGGGAACAGAACACCCATGGAAGGAGTTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR CCA 90 bp GGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCCTGCACTCCCACCAACATTTATGAGAAGCTGTaGCACAGTGCTGGTGGTGTA +
Preference number: 4 (lower is better)
Translates to: GTARLISRVVVQACTPTNIYEKL*HSAGGV
Trigger: TACACCACCAGCACTGTGCCACAGCTTCTCATAAAT...GTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR TCA 90 bp AAGACTGCCCAACTCCACATCTCTTCACTATCTCATCTCTGCTGTTACTCCCTCGAATCCTCCTACCCATaGAGCAAGAGCCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: KTAQLHISSLSHLCCYSLESSYP*SKSQCL
Trigger: CAGGCATTGGCTCTTGCTTCATGGGTAGGAGGATTC...GAGGGAGTAACAGCAGAGATGAGATAGTGAAGAGATGTGGAGTTGGGCAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR CCA 90 bp AAGACTGCCCAACTCCACATCTCTTCACTATCTCATCTCTGCTGTTACTCCCTCAGTCGAAGGTCCATTTaGGAGAGAGCGATGATGGCG +
Preference number: 4 (lower is better)
Translates to: KTAQLHISSLSHLCCYSLSRRSI*ERAMMA
Trigger: CGCCATCATCGCTCTCTCCCAAATGGACCTTCGACT...GAGGGAGTAACAGCAGAGATGAGATAGTGAAGAGATGTGGAGTTGGGCAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR CCA 90 bp CCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTCTGGTTCCTCCTGTGTCCTaGCAGGCCAACTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PFISAPNFVSVTPSMGVLVPPVS*QANLRK
Trigger: CTTCCTCAAGTTGGCCTGCCAGGACACAGGAGGAAC...CAGAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR TCA 90 bp AAGACTGCCCAACTCCACATCTCTTCACTATCTCATCTCTGCTGTTACTCCCTCAGGATGAGTTCCAGCTaGGGCCAATCTAAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: KTAQLHISSLSHLCCYSLRMSSS*GQSKKP
Trigger: GGGCTTTTTAGATTGGCCTCAGCTGGAACTCATCCT...GAGGGAGTAACAGCAGAGATGAGATAGTGAAGAGATGTGGAGTTGGGCAGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR TCA 90 bp CCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCACGCCAGCATCTGCTGTATGTGTAAATGGCTaGGCCATAAAACAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PPTMEECSSFSTSTPASAVCVNG*AIKQGN
Trigger: GTTTCCCTGTTTTATGGCTCAGCCATTTACACATAC...AGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR GCA 90 bp CTACATCTGGGTCCTTTCAATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGGAAGCTGTGGCACAGTaGTGGTGGTGTAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LHLGPFNKILLVYAMVSAEAVAQ*WWCSRG
Trigger: ACCTCTGCTACACCACCAGCACTGTGCCACAGCTTC...CGCTGACACCATTGCATACACTAGCAAGATTTTATTGAAAGGACCCAGATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR TCA 90 bp CTACATCTGGGTCCTTTCAATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGCCAGTGCAAGAGATATaGAAAGCTGGGCCACACACC +
Preference number: 4 (lower is better)
Translates to: LHLGPFNKILLVYAMVSAPVQEI*KAGPHT
Trigger: GGTGTGTGGCCCAGCTTTTCATATCTCTTGCACTGG...CGCTGACACCATTGCATACACTAGCAAGATTTTATTGAAAGGACCCAGATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR CCA 90 bp AAGACTGCCCAACTCCACATCTCTTCACTATCTCATCTCTGCTGTTACTCCCTCGGAAGACCAAGATTATaGCTCTGGCCACAAACATCT +
Preference number: 4 (lower is better)
Translates to: KTAQLHISSLSHLCCYSLGRPRL*LWPQTS
Trigger: AGATGTTTGTGGCCAGAGCCATAATCTTGGTCTTCC...GAGGGAGTAACAGCAGAGATGAGATAGTGAAGAGATGTGGAGTTGGGCAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR GCA 90 bp TGTAACTCCTTCCATGGGTGTTCTGTTCCCAAATCTAAGGAGGGGCATAGTGTCCACTCTCAGAATAACTaGTCTTGGGTTGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: CNSFHGCSVPKSKEGHSVHSQNN*SWVASM
Trigger: CATACTTGCAACCCAAGAGCAGTTATTCTGAGAGTG...GACACTATGCCCCTCCTTAGATTTGGGAACAGAACACCCATGGAAGGAGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR CCA 90 bp TGTAACTCCTTCCATGGGTGTTCTGTTCCCAAATCTAAGGAGGGGCATAGTGTCGCAAGTATGTGTAAATaGCTGAGCCATAAAACAGGG +
Preference number: 4 (lower is better)
Translates to: CNSFHGCSVPKSKEGHSVASMCK*LSHKTG
Trigger: CCCTGTTTTATGGCTCAGCCATTTACACATACTTGC...GACACTATGCCCCTCCTTAGATTTGGGAACAGAACACCCATGGAAGGAGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS-3UTR CCA 90 bp CCTTTTATTGCTGCAGTAACAGGCACTAAAAGACTAGAAATGCAGAGACAACCTCCAAGATTATGGCTCTaGCCACAAACATCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PFIAAVTGTKRLEMQRQPPRLWL*PQTSWP
Trigger: AGGCCAAGATGTTTGTGGCCAGAGCCATAATCTTGG...AGGTTGTCTCTGCATTTCTAGTCTTTTAGTGCCTGTTACTGCAGCAATAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR CAA 72 bp AAGAGACAGCTACATCTGGGTCCTTTCAATAAAATCTaGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGC +
Preference number: 4 (lower is better)
Translates to: KRQLHLGPFNKI*LVYAMVSAFGC
Trigger: GCATCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTATTGAAAGGACCCAGATGTAGCTGTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR CAA 72 bp TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTaGCGGATCCCTTTAGCTCCTTGGCTACTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: YWLVHNVVPPIG*RIPLAPWLLSL
Trigger: TAGAGAAAGTAGCCAAGGAGCTAAAGGGATCCGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR CAA 72 bp CTATTCTCTTCTCTATTCGATGGAAGTATCTTCACCTaGGTAACAAACAAATCTGTTACCCATCTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: LFSSLFDGSIFT*VTNKSVTHLSR
Trigger: TCTACTCAGATGGGTAACAGATTTGTTTGTTACCAAGGTGAAGATACTTCCATCGAATAGAGAAGAGAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR CAA 72 bp TCTTCATTCACATTCAGAAATTCCTGCACATTTGTTTaGTTCTCTGCATGTGATGAGAATACACCATTTTCT +
Preference number: 4 (lower is better)
Translates to: SSFTFRNSCTFV*FSACDENTPFS
Trigger: AGAAAATGGTGTATTCTCATCACATGCAGAGAACAAAACAAATGTGCAGGAATTTCTGAATGTGAATGAAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
3UTR CAA 72 bp TTAACTCTTCATTCACATTCAGAAATTCCTGCACATTaGTTTTGTTCTCTGCATGTGATGAGAATACACCAT +
Preference number: 4 (lower is better)
Translates to: LTLHSHSEIPAH*FCSLHVMRIHH
Trigger: ATGGTGTATTCTCATCACATGCAGAGAACAAAACAAATGTGCAGGAATTTCTGAATGTGAATGAAGAGTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS CCA 90 bp AGGAGCCAAGAATTAATGTTGCAGGGAAGACCAAGATTATGGCTCTaGCCACAAACATCTTGGCCTCTGTTCCTCCTGTGTCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: RSQELMLQGRPRLWL*PQTSWPLFLLCPGR
Trigger: CCTGCCAGGACACAGGAGGAACAGAGGCCAAGATGTTTGTGGCCAGAGCCATAATCTTGGTCTTCCCTGCAACATTAATTCTTGGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071807.2
ENSMUST00000214948.2
CDS TCA 90 bp TTCAGTCGATGTCCACAGAGTGGCATGGCCATCATGAGGCCTGTTTaGATCAGAGAGTTCAAGAATCCTCCTACCCATGAAGCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: FSRCPQSGMAIMRPV*IREFKNPPTHEARA
Trigger: GGCTCTTGCTTCATGGGTAGGAGGATTCTTGAACTCTCTGATTCAAACAGGCCTCATGATGGCCATGCCACTCTGTGGACATCGACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071807.2
ENSMUST00000214948.2
CDS-3UTR CAA 90 bp TTGTGTGAGTTTCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGCAGTCGAAGGTCCATTaGGGAGAGAGCGATGATGGC +
Preference number: 5 (lower is better)
Translates to: LCEFLCECVTSLRMMPSRQSKVH*GESDDG
Trigger: GCCATCATCGCTCTCTCCCAAATGGACCTTCGACTG...CCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACTCACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS CCA 90 bp GTCCATAGGAGCCAAGAATTAATGTTGCAGGGAAGACCAAGATTATaGCTCTGGCCACAAACATCTTGGCCTCTGTTCCTCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: VHRSQELMLQGRPRL*LWPQTSWPLFLLCP
Trigger: AGGACACAGGAGGAACAGAGGCCAAGATGTTTGTGGCCAGAGCCATAATCTTGGTCTTCCCTGCAACATTAATTCTTGGCTCCTATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071807.2
ENSMUST00000214948.2
CDS TCA 90 bp AGAAGAAGTGATTCAGTCGATGTCCACAGAGTGGCATGGCCATCATaGGGCCTGTTTGAATCAGAGAGTTCAAGAATCCTCCTACCCATG +
Preference number: 5 (lower is better)
Translates to: RRSDSVDVHRVAWPS*GLFESESSRILLPM
Trigger: CATGGGTAGGAGGATTCTTGAACTCTCTGATTCAAACAGGCCTCATGATGGCCATGCCACTCTGTGGACATCGACTGAATCACTTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071807.2
ENSMUST00000214948.2
CDS-3UTR CAA 90 bp TCTGTTCCCAAATCTAAGGAGGGGCATAGTGTCCACACTTCAGTCTTCATTCTTATAACTGCTCTTGGGTaGCAAGTATGTGTAAATGGC +
Preference number: 5 (lower is better)
Translates to: SVPKSKEGHSVHTSVFILITALG*QVCVNG
Trigger: GCCATTTACACATACTTGCAACCCAAGAGCAGTTAT...AAGAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGATTTGGGAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214948.2
CDS TCA 72 bp TGTCCACAGAGTGGCATGGCCATCATGAGGCCTGTTTaGATCAGAGAGTTCAAGAATCCTCCTACCCATGAA +
Preference number: 6 (lower is better)
Translates to: CPQSGMAIMRPV*IREFKNPPTHE
Trigger: TTCATGGGTAGGAGGATTCTTGAACTCTCTGATTCAAACAGGCCTCATGATGGCCATGCCACTCTGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071807.2
ENSMUST00000214948.2
CDS TCA 72 bp GATTCAGTCGATGTCCACAGAGTGGCATGGCCATCATaGGGCCTGTTTGAATCAGAGAGTTCAAGAATCCTC +
Preference number: 6 (lower is better)
Translates to: DSVDVHRVAWPS*GLFESESSRIL
Trigger: GAGGATTCTTGAACTCTCTGATTCAAACAGGCCTCATGATGGCCATGCCACTCTGTGGACATCGACTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071807.2
ENSMUST00000214948.2
CDS TCA 72 bp ATAACTGCTCTTGGGTTGCAAGTATGTGTAAATGGCTaGGCCATAAAACAGGGAAACCACCAGAAGGTGGGA +
Preference number: 6 (lower is better)
Translates to: ITALGLQVCVNG*AIKQGNHQKVG
Trigger: TCCCACCTTCTGGTGGTTTCCCTGTTTTATGGCTCAGCCATTTACACATACTTGCAACCCAAGAGCAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071807.2
ENSMUST00000214948.2
CDS CCA 72 bp CCACAAATTTTCCATCACTCTCAGAATAACTGCTCTTaGGTTGCAAGTATGTGTAAATGGCTGAGCCATAAA +
Preference number: 6 (lower is better)
Translates to: PQIFHHSQNNCS*VASMCKWLSHK
Trigger: TTTATGGCTCAGCCATTTACACATACTTGCAACCCAAGAGCAGTTATTCTGAGAGTGATGGAAAATTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071807.2
ENSMUST00000214948.2