Pregenerated sensors for OLFR1384 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044170Ensembl transcript IDs: ENSMUST00000060434.5, ENSMUST00000213776.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGATCCTCACTGGGAGTCCTCTCACATATCCAGGTGTTGCCTATaGCATGGAGATCCTGCAGCTTTGGATCTGCAGGACTGGCCCCTT | + |
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Preference number: 1 (lower is better) Translates to: LDPHWESSHISRCCL*HGDPAALDLQDWPL Trigger: AAGGGGCCAGTCCTGCAGATCCAAAGCTGCAGGATCTCCATGGCATAGGCAACACCTGGATATGTGAGAGGACTCCCAGTGAGGATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CCA 90 bp | ACTGGCCCCTTCATGCACTCCAGCAATTCAAAGATGGGGTGGATGTaGGGATCAGCCAACTCAGCACTGGGTCTGAGCCTGTGTGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: TGPFMHSSNSKMGWM*GSANSALGLSLCGN Trigger: GTTTCCACACAGGCTCAGACCCAGTGCTGAGTTGGCTGATCCCCACATCCACCCCATCTTTGAATTGCTGGAGTGCATGAAGGGGCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CCA 90 bp | TCCTCACTGGGAGTCCTCTCACATATCCAGGTGTTGCCTATGCCATaGAGATCCTGCAGCTTTGGATCTGCAGGACTGGCCCCTTCATGC | + |
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Preference number: 1 (lower is better) Translates to: SSLGVLSHIQVLPMP*RSCSFGSAGLAPSC Trigger: GCATGAAGGGGCCAGTCCTGCAGATCCAAAGCTGCAGGATCTCCATGGCATAGGCAACACCTGGATATGTGAGAGGACTCCCAGTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 90 bp | TCACTACTGGATCCTCACTGGGAGTCCTCTCACATATCCAGGTGTTaGCTATGCCATGGAGATCCTGCAGCTTTGGATCTGCAGGACTGG | + |
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Preference number: 1 (lower is better) Translates to: SLLDPHWESSHISRC*LCHGDPAALDLQDW Trigger: CCAGTCCTGCAGATCCAAAGCTGCAGGATCTCCATGGCATAGGCAACACCTGGATATGTGAGAGGACTCCCAGTGAGGATCCAGTAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 90 bp | ACCAGCTCTTCTAAGCCAGTGACACCAGGATCAGCTCTCTGGTTTTaGCAAGGTGAGGATGGGGCCAGCTCTTCCACTTTCATTCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: TSSSKPVTPGSALWF*QGEDGASSSTFIPL Trigger: CAAAGGAATGAAAGTGGAAGAGCTGGCCCCATCCTCACCTTGGCAAAACCAGAGAGCTGATCCTGGTGTCACTGGCTTAGAAGAGCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 90 bp | CACAGCAGTAAAACCCTAACTAAAAGAGTCTGGATTGAGGCTTCTTaGTTCTGCTACTGTATCACTACTGGATCCTCACTGGGAGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: HSSKTLTKRVWIEAS*FCYCITTGSSLGVL Trigger: GAGGACTCCCAGTGAGGATCCAGTAGTGATACAGTAGCAGAAGCAAGAAGCCTCAATCCAGACTCTTTTAGTTAGGGTTTTACTGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR TCA 90 bp | CATCCACTTCCAGGGAATCTGACACCATCTTCTAGCCCTCATAGATaGCAGGTACACATACAATGTACATACCTACATGTCAGCAAAACA | + |
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Preference number: 1 (lower is better) Translates to: HPLPGNLTPSSSPHR*QVHIQCTYLHVSKT Trigger: TGTTTTGCTGACATGTAGGTATGTACATTGTATGTGTACCTGTCATCTATGAGGGCTAGAAGATGGTGTCAGATTCCCTGGAAGTGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 90 bp | CACCAGGCCCGTTGTGCATTGGATGTCTTAGGCTTCCTTTCAGTTTaGACATTGTTGAAGGGACATATGTTTGGGTCTCTTAAATATTTA | + |
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Preference number: 1 (lower is better) Translates to: HQARCALDVLGFLSV*TLLKGHMFGSLKYL Trigger: TAAATATTTAAGAGACCCAAACATATGTCCCTTCAACAATGTGCAAACTGAAAGGAAGCCTAAGACATCCAATGCACAACGGGCCTGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR TCA 90 bp | CATCTTTCCTTGCAAATGTTCATTGCAATCAGTTATTGGTCTGTATaGTGTATACTTAGCTCAGGAAGTGGGACTTTTAGAAGGTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: HLSLQMFIAISYWSV*CILSSGSGTFRRCG Trigger: GCCACACCTTCTAAAAGTCCCACTTCCTGAGCTAAGTATACATCATACAGACCAATAACTGATTGCAATGAACATTTGCAAGGAAAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCCTATGCCATGGAGATCCTGCAGCTTTGGATCTGCAGGACTGGCCCCTTCACCACTTTCATTCCTTTaGAATCAGCACTCCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LPMPWRSCSFGSAGLAPSPLSFL*NQHSCA Trigger: GGCACAGGAGTGCTGATTCCAAAGGAATGAAAGTGG...TGAAGGGGCCAGTCCTGCAGATCCAAAGCTGCAGGATCTCCATGGCATAGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 90 bp | TCTCACATATCCAGGTGTTGCCTATGCCATGGAGATCCTGCAGCTTaGGATCTGCAGGACTGGCCCCTTCATGCACTCCAGCAATTCAAA | + |
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Preference number: 2 (lower is better) Translates to: SHISRCCLCHGDPAA*DLQDWPLHALQQFK Trigger: TTTGAATTGCTGGAGTGCATGAAGGGGCCAGTCCTGCAGATCCAAAGCTGCAGGATCTCCATGGCATAGGCAACACCTGGATATGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 90 bp | GTATACTTAGCTCAGGAAGTGGGACTTTTAGAAGGTGTGGCCCTGTaGGAGTTGGTGTGGCCTTGTTGGAGTAGGCGTGACATTGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: VYLAQEVGLLEGVAL*ELVWPCWSRRDIVD Trigger: ATCCACAATGTCACGCCTACTCCAACAAGGCCACACCAACTCCAACAGGGCCACACCTTCTAAAAGTCCCACTTCCTGAGCTAAGTATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATTACTACATTGAATTGGACTCTCATGCACTGCATGTaGCACCAGGCCCGTTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: AKRMKALLKHSITTLNWTLMHCM*HQARCA Trigger: TGCACAACGGGCCTGGTGGCACATGCAGTGCATGAG...AGTCCAATTCAATGTAGTAATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATGTTTATCCGTTGGTGCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATGTGTGGAAACTGAATTaGTCAGCCCACCAGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LMFIRWCKENESPLKTQHVWKLN*SAHQLF Trigger: GAAGAGCTGGTGGGCTGATCAATTCAGTTTCCACAC...ATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGCACCAACGGATAAACATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATTACTACATTGAATTGGACTAAGATGGGGTGGATGTaGGGATCAGCCAACTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: AKRMKALLKHSITTLNWTKMGWM*GSANSA Trigger: TGCTGAGTTGGCTGATCCCCACATCCACCCCATCTT...AGTCCAATTCAATGTAGTAATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATTACTACATTGAATTGGACTAAGGTGTGGCCCTGTTaGAGTTGGTGTGGCCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: AKRMKALLKHSITTLNWTKVWPC*SWCGLV Trigger: AACAAGGCCACACCAACTCCAACAGGGCCACACCTT...AGTCCAATTCAATGTAGTAATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATTACTACATTGAATTGGACTGGACTGGCCCCTTCATaGACTCCAGCAATTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: AKRMKALLKHSITTLNWTGLAPS*TPAIQR Trigger: TCTTTGAATTGCTGGAGTGCATGAAGGGGCCAGTCC...AGTCCAATTCAATGTAGTAATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGTACACATACAATGTACATACCTACATGTCAGCAAAACATGCATATTGCAATGCCATGGAGATCCTaGAGCTTTGGATCTGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TGTHTMYIPTCQQNMHIAMPWRS*SFGSAG Trigger: TCCTGCAGATCCAAAGCTGCAGGATCTCCATGGCAT...TGCAATATGCATGTTTTGCTGACATGTAGGTATGTACATTGTATGTGTACCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR GCA 90 bp | CTGATGTTTATCCGTTGGTGCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATGCCACTCTCTTTCTTTaGAATTCCCCCACCAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LMFIRWCKENESPLKTQHATLFL*NSPTKK Trigger: TTTCTTGGTGGGGGAATTGCAAAGAAAGAGAGTGGC...ATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGCACCAACGGATAAACATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTACACATACAATGTACATACCTACATGTCAGCAAAACATGCATATTGCACTACTGGATCCTCACTaGGAGTCCTCTCACATATCC | + |
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Preference number: 2 (lower is better) Translates to: TGTHTMYIPTCQQNMHIALLDPH*ESSHIS Trigger: GGATATGTGAGAGGACTCCCAGTGAGGATCCAGTAG...TGCAATATGCATGTTTTGCTGACATGTAGGTATGTACATTGTATGTGTACCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR CCA 90 bp | GACAATATACCCTTTTGTCCATACATCTTTCCTTGCAAATGTTCATTGCAATCACTGTTGGAGTTGGTGTaGCCTTGTTGGAGTAGGCGT | + |
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Preference number: 2 (lower is better) Translates to: DNIPFCPYIFPCKCSLQSLLELV*PCWSRR Trigger: ACGCCTACTCCAACAAGGCCACACCAACTCCAACAG...TGATTGCAATGAACATTTGCAAGGAAAGATGTATGGACAAAAGGGTATATTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 90 bp | CTATATTCAAGCAGTCCTTACCACCACCTAGGAAATTCTTTATGTTaGACTTCTAAGGGAAAGTGTGTTGGGCACAGAATTCTCGACTGT | + |
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Preference number: 2 (lower is better) Translates to: LYSSSPYHHLGNSLC*TSKGKCVGHRILDC Trigger: ACAGTCGAGAATTCTGTGCCCAACACACTTTCCCTTAGAAGTCAAACATAAAGAATTTCCTAGGTGGTGGTAAGGACTGCTTGAATATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATTACTACATTGAATTGGACTCTAGGAGCCTTCAGATaGAGCTGTAGAACTCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: AKRMKALLKHSITTLNWTLGAFR*SCRTLS Trigger: GCTTAGAGTTCTACAGCTTCATCTGAAGGCTCCTAG...AGTCCAATTCAATGTAGTAATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR GCA 90 bp | GACAATATACCCTTTTGTCCATACATCTTTCCTTGCAAATGTTCATTGCAATCACTCCTCCACTATGTTTaGCTGGATGCTGCCATGTTC | + |
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Preference number: 2 (lower is better) Translates to: DNIPFCPYIFPCKCSLQSLLHYV*LDAAMF Trigger: GAACATGGCAGCATCCAGGCAAACATAGTGGAGGAG...TGATTGCAATGAACATTTGCAAGGAAAGATGTATGGACAAAAGGGTATATTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 90 bp | CATGGAAGCTGTGATGTGTCACAGTGTGTCAGACAATATACCCTTTaGTCCATACATCTTTCCTTGCAAATGTTCATTGCAATCAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: HGSCDVSQCVRQYTL*SIHLSLQMFIAISY Trigger: ATAACTGATTGCAATGAACATTTGCAAGGAAAGATGTATGGACAAAAGGGTATATTGTCTGACACACTGTGACACATCACAGCTTCCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATGTTTATCCGTTGGTGCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATTTTACTGATTCTTTGTaGCTTTCACACCATGCATCA | + |
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Preference number: 2 (lower is better) Translates to: LMFIRWCKENESPLKTQHFTDSL*LSHHAS Trigger: TGATGCATGGTGTGAAAGTCACAAAGAATCAGTAAA...ATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGCACCAACGGATAAACATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGTACACATACAATGTACATACCTACATGTCAGCAAAACATGCATATTGCATGTCCTTGTAAGAGCTaGCTTAGTCATGGTATCTGT | + |
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Preference number: 2 (lower is better) Translates to: TGTHTMYIPTCQQNMHIACPCKS*LSHGIC Trigger: ACAGATACCATGACTAAGGCAGCTCTTACAAGGACA...TGCAATATGCATGTTTTGCTGACATGTAGGTATGTACATTGTATGTGTACCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATTACTACATTGAATTGGACTATGCTGCCATGTTCCTaGCTTGATGATAATTGGACT | + |
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Preference number: 2 (lower is better) Translates to: AKRMKALLKHSITTLNWTMLPCS*LDDNWT Trigger: AGTCCAATTATCATCAAGGCAGGAACATGGCAGCAT...AGTCCAATTCAATGTAGTAATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR GCA 90 bp | GACAATATACCCTTTTGTCCATACATCTTTCCTTGCAAATGTTCATTGCAATCAGACCCTTATCCTAACTaGCTGGAAGTCAGTATTCTG | + |
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Preference number: 2 (lower is better) Translates to: DNIPFCPYIFPCKCSLQSDPYPN*LEVSIL Trigger: CAGAATACTGACTTCCAGGCAGTTAGGATAAGGGTC...TGATTGCAATGAACATTTGCAAGGAAAGATGTATGGACAAAAGGGTATATTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTACACATACAATGTACATACCTACATGTCAGCAAAACATGCATATTGCATGCCTTGATGATAATTaGACTGAACCTCTGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: TGTHTMYIPTCQQNMHIACLDDN*TEPLNL Trigger: CAGGTTCAGAGGTTCAGTCCAATTATCATCAAGGCA...TGCAATATGCATGTTTTGCTGACATGTAGGTATGTACATTGTATGTGTACCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 90 bp | GCCCGTTGTGCATTGGATGTCTTAGGCTTCCTTTCAGTTTGCACATaGTTGAAGGGACATATGTTTGGGTCTCTTAAATATTTATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: ARCALDVLGFLSVCT*LKGHMFGSLKYLFL Trigger: TAAAAATAAATATTTAAGAGACCCAAACATATGTCCCTTCAACAATGTGCAAACTGAAAGGAAGCCTAAGACATCCAATGCACAACGGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR CCA 90 bp | CTGATGTTTATCCGTTGGTGCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATGAACAGGTAATTTCTTaGAATTCTGGGGGTTATATA | + |
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Preference number: 2 (lower is better) Translates to: LMFIRWCKENESPLKTQHEQVIS*NSGGYI Trigger: TATATAACCCCCAGAATTCCAAGAAATTACCTGTTC...ATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGCACCAACGGATAAACATCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 90 bp | CGTTGTGCATTGGATGTCTTAGGCTTCCTTTCAGTTTGCACATTGTaGAAGGGACATATGTTTGGGTCTCTTAAATATTTATTTTTATCC | + |
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Preference number: 2 (lower is better) Translates to: RCALDVLGFLSVCTL*KGHMFGSLKYLFLS Trigger: GGATAAAAATAAATATTTAAGAGACCCAAACATATGTCCCTTCAACAATGTGCAAACTGAAAGGAAGCCTAAGACATCCAATGCACAACG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 90 bp | GACAATATACCCTTTTGTCCATACATCTTTCCTTGCAAATGTTCATaGCAATCAGTTATTGGTCTGTATGATGTATACTTAGCTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: DNIPFCPYIFPCKCS*QSVIGLYDVYLAQE Trigger: TTCCTGAGCTAAGTATACATCATACAGACCAATAACTGATTGCAATGAACATTTGCAAGGAAAGATGTATGGACAAAAGGGTATATTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATTACTACATTGAATTGGACTCTTGCAAATGTTCATTaGAATCAGTTATTGGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: AKRMKALLKHSITTLNWTLANVH*NQLLVC Trigger: ACAGACCAATAACTGATTGCAATGAACATTTGCAAG...AGTCCAATTCAATGTAGTAATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATTACTACATTGAATTGGACTAGCATGTTCCAAATTTaGCTCAAAATGGTTGAATTG | + |
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Preference number: 2 (lower is better) Translates to: AKRMKALLKHSITTLNWTSMFQI*LKMVEL Trigger: CAATTCAACCATTTTGAGCCAAATTTGGAACATGCT...AGTCCAATTCAATGTAGTAATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CCA 72 bp | CCAGGTGTTGCCTATGCCATGGAGATCCTGCAGCTTTaGATCTGCAGGACTGGCCCCTTCATGCACTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: PGVAYAMEILQL*ICRTGPFMHSS Trigger: GCTGGAGTGCATGAAGGGGCCAGTCCTGCAGATCCAAAGCTGCAGGATCTCCATGGCATAGGCAACACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR TCA 72 bp | GGTGGATGTGGGGATCAGCCAACTCAGCACTGGGTCTaGGCCTGTGTGGAAACTGAATTGATCAGCCCACCA | + |
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Preference number: 3 (lower is better) Translates to: GGCGDQPTQHWV*ACVETELISPP Trigger: TGGTGGGCTGATCAATTCAGTTTCCACACAGGCTCAGACCCAGTGCTGAGTTGGCTGATCCCCACATCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 72 bp | TCCTGCAGCTTTGGATCTGCAGGACTGGCCCCTTCATaGACTCCAGCAATTCAAAGATGGGGTGGATGTGGG | + |
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Preference number: 3 (lower is better) Translates to: SCSFGSAGLAPS*TPAIQRWGGCG Trigger: CCCACATCCACCCCATCTTTGAATTGCTGGAGTGCATGAAGGGGCCAGTCCTGCAGATCCAAAGCTGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CCA 72 bp | GGAGTCCTCTCACATATCCAGGTGTTGCCTATGCCATaGAGATCCTGCAGCTTTGGATCTGCAGGACTGGCC | + |
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Preference number: 3 (lower is better) Translates to: GVLSHIQVLPMP*RSCSFGSAGLA Trigger: GGCCAGTCCTGCAGATCCAAAGCTGCAGGATCTCCATGGCATAGGCAACACCTGGATATGTGAGAGGACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 72 bp | TCTAAGCCAGTGACACCAGGATCAGCTCTCTGGTTTTaGCAAGGTGAGGATGGGGCCAGCTCTTCCACTTTC | + |
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Preference number: 3 (lower is better) Translates to: SKPVTPGSALWF*QGEDGASSSTF Trigger: GAAAGTGGAAGAGCTGGCCCCATCCTCACCTTGGCAAAACCAGAGAGCTGATCCTGGTGTCACTGGCTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 72 bp | CACTGGGAGTCCTCTCACATATCCAGGTGTTGCCTATaGCATGGAGATCCTGCAGCTTTGGATCTGCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: HWESSHISRCCL*HGDPAALDLQD Trigger: GTCCTGCAGATCCAAAGCTGCAGGATCTCCATGGCATAGGCAACACCTGGATATGTGAGAGGACTCCCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CCA 72 bp | TGCCATGGAGATCCTGCAGCTTTGGATCTGCAGGACTaGCCCCTTCATGCACTCCAGCAATTCAAAGATGGG | + |
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Preference number: 3 (lower is better) Translates to: CHGDPAALDLQD*PLHALQQFKDG Trigger: CCCATCTTTGAATTGCTGGAGTGCATGAAGGGGCCAGTCCTGCAGATCCAAAGCTGCAGGATCTCCATGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 72 bp | TCTTCCACTTTCATTCCTTTGGAATCAGCACTCCTGTaGCAACACCACCAAGGTCAGCTCCACTGTGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: SSTFIPLESALL*QHHQGQLHCAA Trigger: GGCAGCACAGTGGAGCTGACCTTGGTGGTGTTGGCACAGGAGTGCTGATTCCAAAGGAATGAAAGTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 72 bp | GATCCTCACTGGGAGTCCTCTCACATATCCAGGTGTTaGCTATGCCATGGAGATCCTGCAGCTTTGGATCTG | + |
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Preference number: 3 (lower is better) Translates to: DPHWESSHISRC*LCHGDPAALDL Trigger: CAGATCCAAAGCTGCAGGATCTCCATGGCATAGGCAACACCTGGATATGTGAGAGGACTCCCAGTGAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 72 bp | CCATCTCATGCACTGCATGTGCCACCAGGCCCGTTGTaGATTGGATGTCTTAGGCTTCCTTTCAGTTTGCAC | + |
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Preference number: 3 (lower is better) Translates to: PSHALHVPPGPL*IGCLRLPFSLH Trigger: GTGCAAACTGAAAGGAAGCCTAAGACATCCAATGCACAACGGGCCTGGTGGCACATGCAGTGCATGAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CCA 72 bp | GAAGGTGTGGCCCTGTTGGAGTTGGTGTGGCCTTGTTaGAGTAGGCGTGACATTGTGGATGTGAGCTTTAAG | + |
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Preference number: 3 (lower is better) Translates to: EGVALLELVWPC*SRRDIVDVSFK Trigger: CTTAAAGCTCACATCCACAATGTCACGCCTACTCCAACAAGGCCACACCAACTCCAACAGGGCCACACCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCAAGGTGAGGATGGGGCCAGCTCTTCCACTTTCATTCCTTTGGAATCAGCACTAAGGGAAAGTGTGTaGGGCACAGAATTCTCGACT | + |
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Preference number: 3 (lower is better) Translates to: CQGEDGASSSTFIPLESALRESV*GTEFST Trigger: AGTCGAGAATTCTGTGCCCAACACACTTTCCCTTAG...TGCTGATTCCAAAGGAATGAAAGTGGAAGAGCTGGCCCCATCCTCACCTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CCA 72 bp | CTTGCTTCTGCTACTGTATCACTACTGGATCCTCACTaGGAGTCCTCTCACATATCCAGGTGTTGCCTATGC | + |
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Preference number: 3 (lower is better) Translates to: LASATVSLLDPH*ESSHISRCCLC Trigger: GCATAGGCAACACCTGGATATGTGAGAGGACTCCCAGTGAGGATCCAGTAGTGATACAGTAGCAGAAGCAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 72 bp | TCCTCCACTATGTTTGCCTGGATGCTGCCATGTTCCTaGCTTGATGATAATTGGACTGAACCTCTGAACCTG | + |
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Preference number: 3 (lower is better) Translates to: SSTMFAWMLPCS*LDDNWTEPLNL Trigger: CAGGTTCAGAGGTTCAGTCCAATTATCATCAAGGCAGGAACATGGCAGCATCCAGGCAAACATAGTGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CCA 72 bp | TGTAGAACTCTAAGCTCCTCCTCCACTATGTTTGCCTaGATGCTGCCATGTTCCTGCCTTGATGATAATTGG | + |
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Preference number: 3 (lower is better) Translates to: CRTLSSSSTMFA*MLPCSCLDDNW Trigger: CCAATTATCATCAAGGCAGGAACATGGCAGCATCCAGGCAAACATAGTGGAGGAGGAGCTTAGAGTTCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 72 bp | CTAACTAAAAGAGTCTGGATTGAGGCTTCTTGCTTCTaGTACTGTATCACTACTGGATCCTCACTGGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: LTKRVWIEASCF*YCITTGSSLGV Trigger: GACTCCCAGTGAGGATCCAGTAGTGATACAGTAGCAGAAGCAAGAAGCCTCAATCCAGACTCTTTTAGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 72 bp | AAAACCCTAACTAAAAGAGTCTGGATTGAGGCTTCTTaGTTCTGCTACTGTATCACTACTGGATCCTCACTG | + |
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Preference number: 3 (lower is better) Translates to: KTLTKRVWIEAS*FCYCITTGSSL Trigger: CAGTGAGGATCCAGTAGTGATACAGTAGCAGAAGCAAGAAGCCTCAATCCAGACTCTTTTAGTTAGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR GCA 72 bp | CGTTGTGCATTGGATGTCTTAGGCTTCCTTTCAGTTTaGACATTGTTGAAGGGACATATGTTTGGGTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: RCALDVLGFLSV*TLLKGHMFGSL Trigger: AAGAGACCCAAACATATGTCCCTTCAACAATGTGCAAACTGAAAGGAAGCCTAAGACATCCAATGCACAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CCA 72 bp | TCTGTTCACAGCAGTAAAACCCTAACTAAAAGAGTCTaGATTGAGGCTTCTTGCTTCTGCTACTGTATCACT | + |
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Preference number: 3 (lower is better) Translates to: SVHSSKTLTKRV*IEASCFCYCIT Trigger: AGTGATACAGTAGCAGAAGCAAGAAGCCTCAATCCAGACTCTTTTAGTTAGGGTTTTACTGCTGTGAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR CAA 90 bp | CTGATGTTTATCCGTTGGTGCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATTGGCAAACCTCAGGATaGACAGACACTAATTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LMFIRWCKENESPLKTQHWQTSG*TDTNFL Trigger: CAGAAAATTAGTGTCTGTCAATCCTGAGGTTTGCCA...ATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGCACCAACGGATAAACATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTACACATACAATGTACATACCTACATGTCAGCAAAACATGCATATTGCAAGGCTTCCTTTCAGTTaGCACATTGTTGAAGGGACA | + |
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Preference number: 3 (lower is better) Translates to: TGTHTMYIPTCQQNMHIARLPFS*HIVEGT Trigger: TGTCCCTTCAACAATGTGCAAACTGAAAGGAAGCCT...TGCAATATGCATGTTTTGCTGACATGTAGGTATGTACATTGTATGTGTACCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR-3UTR CAA 90 bp | CTGATGTTTATCCGTTGGTGCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATAGACAATATACCCTTTaGTCCATACATCTTTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: LMFIRWCKENESPLKTQHRQYTL*SIHLSL Trigger: CAAGGAAAGATGTATGGACAAAAGGGTATATTGTCT...ATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGCACCAACGGATAAACATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR TCA 72 bp | TTGCAAATGTTCATTGCAATCAGTTATTGGTCTGTATaGTGTATACTTAGCTCAGGAAGTGGGACTTTTAGA | + |
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Preference number: 3 (lower is better) Translates to: LQMFIAISYWSV*CILSSGSGTFR Trigger: TCTAAAAGTCCCACTTCCTGAGCTAAGTATACATCATACAGACCAATAACTGATTGCAATGAACATTTGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 72 bp | TCCAGGTGTTGCCTATGCCATGGAGATCCTGCAGCTTaGGATCTGCAGGACTGGCCCCTTCATGCACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SRCCLCHGDPAA*DLQDWPLHALQ Trigger: CTGGAGTGCATGAAGGGGCCAGTCCTGCAGATCCAAAGCTGCAGGATCTCCATGGCATAGGCAACACCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 72 bp | GGTGAGGATGGGGCCAGCTCTTCCACTTTCATTCCTTaGGAATCAGCACTCCTGTGCCAACACCACCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: GEDGASSSTFIP*ESALLCQHHQG Trigger: ACCTTGGTGGTGTTGGCACAGGAGTGCTGATTCCAAAGGAATGAAAGTGGAAGAGCTGGCCCCATCCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| CDS-3UTR TCA 90 bp | GATCCTGCAGCTTTGGATCTGCAGGACTGGCCCCTTCATGCACTCCAGCAATTCGCCCAGATCTTGACTTaGTCTTCAACACTGCATGAG | + |
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Preference number: 4 (lower is better) Translates to: DPAALDLQDWPLHALQQFAQILT*SSTLHE Trigger: CTCATGCAGTGTTGAAGATCAAGTCAAGATCTGGGC...GAATTGCTGGAGTGCATGAAGGGGCCAGTCCTGCAGATCCAAAGCTGCAGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 72 bp | CTCATGCACTGCATGTGCCACCAGGCCCGTTGTGCATaGGATGTCTTAGGCTTCCTTTCAGTTTGCACATTG | + |
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Preference number: 4 (lower is better) Translates to: LMHCMCHQARCA*DVLGFLSVCTL Trigger: CAATGTGCAAACTGAAAGGAAGCCTAAGACATCCAATGCACAACGGGCCTGGTGGCACATGCAGTGCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 72 bp | TTCCCATCTCATGCACTGCATGTGCCACCAGGCCCGTaGTGCATTGGATGTCTTAGGCTTCCTTTCAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: FPSHALHVPPGP*CIGCLRLPFSL Trigger: CAAACTGAAAGGAAGCCTAAGACATCCAATGCACAACGGGCCTGGTGGCACATGCAGTGCATGAGATGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| CDS-3UTR CCA 90 bp | TGCCAAGGTGAGGATGGGGCCAGCTCTTCCACTTTCATTCCTTTGGAATCAGCAAAAACCACAGTAAGGTaGGACCCACAAGTTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: CQGEDGASSSTFIPLESAKTTVR*DPQVPR Trigger: TCTGGGAACTTGTGGGTCCCACCTTACTGTGGTTTT...TGCTGATTCCAAAGGAATGAAAGTGGAAGAGCTGGCCCCATCCTCACCTTGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| CDS-3UTR TCA 90 bp | CTGATGTTTATCCGTTGGTGCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATTCTGCGCCCAGATCTTaGCTTGATCTTCAACACTGC | + |
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Preference number: 4 (lower is better) Translates to: LMFIRWCKENESPLKTQHSAPRS*LDLQHC Trigger: GCAGTGTTGAAGATCAAGTCAAGATCTGGGCGCAGA...ATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGCACCAACGGATAAACATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| CDS-3UTR GCA 90 bp | GACAATATACCCTTTTGTCCATACATCTTTCCTTGCAAATGTTCATTGCAATCAGGAGGAGATGGCCAATaGATGGCAGAGAAGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: DNIPFCPYIFPCKCSLQSGGDGQ*MAEKGV Trigger: CACCCCCTTCTCTGCCATGCATTGGCCATCTCCTCC...TGATTGCAATGAACATTTGCAAGGAAAGATGTATGGACAAAAGGGTATATTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 72 bp | CCGTTGTGCATTGGATGTCTTAGGCTTCCTTTCAGTTaGCACATTGTTGAAGGGACATATGTTTGGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PLCIGCLRLPFS*HIVEGTYVWVS Trigger: AGAGACCCAAACATATGTCCCTTCAACAATGTGCAAACTGAAAGGAAGCCTAAGACATCCAATGCACAACGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| CDS-3UTR TCA 90 bp | ACAGGTACACATACAATGTACATACCTACATGTCAGCAAAACATGCATATTGCACACCTCGGGAAAGACTaGTTAGAAGTTTGGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: TGTHTMYIPTCQQNMHIAHLGKD*LEVWAQ Trigger: CTGTGCCCAAACTTCTAATCAGTCTTTCCCGAGGTG...TGCAATATGCATGTTTTGCTGACATGTAGGTATGTACATTGTATGTGTACCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 72 bp | AGCAGTCCTTACCACCACCTAGGAAATTCTTTATGTTaGACTTCTAAGGGAAAGTGTGTTGGGCACAGAATT | + |
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Preference number: 4 (lower is better) Translates to: SSPYHHLGNSLC*TSKGKCVGHRI Trigger: AATTCTGTGCCCAACACACTTTCCCTTAGAAGTCAAACATAAAGAATTTCCTAGGTGGTGGTAAGGACTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| CDS-3UTR TCA 90 bp | GACAATATACCCTTTTGTCCATACATCTTTCCTTGCAAATGTTCATTGCAATCAAGGATAAGTTCCAGTTaGGGCCAGTCTGAGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: DNIPFCPYIFPCKCSLQSRISSS*GQSEKP Trigger: AGGCTTCTCAGACTGGCCTCAACTGGAACTTATCCT...TGATTGCAATGAACATTTGCAAGGAAAGATGTATGGACAAAAGGGTATATTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| CDS-3UTR TCA 90 bp | TCTATGAAGCTATATTCAAGCAGTCCTTACCACCACCTAGGAAATTCTTTATGTATGATGAGACTTGTCTaGGTCAGAGAGTTCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: SMKLYSSSPYHHLGNSLCMMRLV*VREFTR Trigger: CCTTGTGAACTCTCTGACTCAGACAAGTCTCATCAT...ACATAAAGAATTTCCTAGGTGGTGGTAAGGACTGCTTGAATATAGCTTCATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 72 bp | AAGAAACCTAAAATTTTTGGTGAGCCCTGCCTCAGTTaGTCATATGATATCCCAGAGACTGTCTTCTATTCC | + |
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Preference number: 4 (lower is better) Translates to: KKPKIFGEPCLS*SYDIPETVFYS Trigger: GGAATAGAAGACAGTCTCTGGGATATCATATGACAAACTGAGGCAGGGCTCACCAAAAATTTTAGGTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| CDS-3UTR GCA 90 bp | TTTGGGTTTTGGTTACAATACACCTTGCAGAAACATCTTTTGACCAGGACAAACCTTGATCTTCAACACTaGATGAGCAATGTGTGCATA | + |
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Preference number: 4 (lower is better) Translates to: FGFWLQYTLQKHLLTRTNLDLQH*MSNVCI Trigger: TATGCACACATTGCTCATGCAGTGTTGAAGATCAAG...GTTTGTCCTGGTCAAAAGATGTTTCTGCAAGGTGTATTGTAACCAAAACCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGAGAATGAAAGCCCTCTTAAAACACAGCATTACTACATTGAATTGGACTCTTTTACAAGTACCTTaGACAGAGCCCCCTTTACAT | + |
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Preference number: 4 (lower is better) Translates to: AKRMKALLKHSITTLNWTLLQVP*TEPPLH Trigger: ATGTAAAGGGGGCTCTGTGCAAGGTACTTGTAAAAG...AGTCCAATTCAATGTAGTAATGCTGTGTTTTAAGAGGGCTTTCATTCTCTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 72 bp | TGTGATGTGTCACAGTGTGTCAGACAATATACCCTTTaGTCCATACATCTTTCCTTGCAAATGTTCATTGCA | + |
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Preference number: 4 (lower is better) Translates to: CDVSQCVRQYTL*SIHLSLQMFIA Trigger: TGCAATGAACATTTGCAAGGAAAGATGTATGGACAAAAGGGTATATTGTCTGACACACTGTGACACATCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 72 bp | GCATTGGATGTCTTAGGCTTCCTTTCAGTTTGCACATaGTTGAAGGGACATATGTTTGGGTCTCTTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: ALDVLGFLSVCT*LKGHMFGSLKY Trigger: ATATTTAAGAGACCCAAACATATGTCCCTTCAACAATGTGCAAACTGAAAGGAAGCCTAAGACATCCAATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 72 bp | GTCAGACAATATACCCTTTTGTCCATACATCTTTCCTaGCAAATGTTCATTGCAATCAGTTATTGGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VRQYTLLSIHLS*QMFIAISYWSV Trigger: TACAGACCAATAACTGATTGCAATGAACATTTGCAAGGAAAGATGTATGGACAAAAGGGTATATTGTCTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| 3UTR CAA 72 bp | TTGGATGTCTTAGGCTTCCTTTCAGTTTGCACATTGTaGAAGGGACATATGTTTGGGTCTCTTAAATATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LDVLGFLSVCTL*KGHMFGSLKYL Trigger: TAAATATTTAAGAGACCCAAACATATGTCCCTTCAACAATGTGCAAACTGAAAGGAAGCCTAAGACATCCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| CDS-3UTR CAA 90 bp | TTGCCTATGCCATGGAGATCCTGCAGCTTTGGATCTGCAGGACTGGCCCCTTCACAGATGAAGGTCTTGTaGAGTGAGAACAATAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPMPWRSCSFGSAGLAPSQMKVL*SENNNG Trigger: ACCATTATTGTTCTCACTCAACAAGACCTTCATCTG...TGAAGGGGCCAGTCCTGCAGATCCAAAGCTGCAGGATCTCCATGGCATAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| CDS-3UTR CAA 90 bp | TCTATGAAGCTATATTCAAGCAGTCCTTACCACCACCTAGGAAATTCTTTATGTCCTTTTACAAGTACCTaGCACAGAGCCCCCTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: SMKLYSSSPYHHLGNSLCPFTST*HRAPFT Trigger: TGTAAAGGGGGCTCTGTGCAAGGTACTTGTAAAAGG...ACATAAAGAATTTCCTAGGTGGTGGTAAGGACTGCTTGAATATAGCTTCATAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213776.2 |
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| CDS CCA 72 bp | AGGGCAGCAAACTTCCCTTCACTACCAGAATACGTGTaGATAGGCTGGAGATACGTGTACATGGCTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RAANFPSLPEYV*IGWRYVYMAEP Trigger: TGGCTCAGCCATGTACACGTATCTCCAGCCTATCCACACGTATTCTGGTAGTGAAGGGAAGTTTGCTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060434.5 ENSMUST00000213776.2 |
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| CDS TCA 72 bp | AAAATCGAAATGAAGACCAGGAGGATAAGTTCCAGTTaGGGCCAGTCTGAGAAGCCTACCAACAGGAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: KIEMKTRRISSS*GQSEKPTNRKP Trigger: AGGTTTCCTGTTGGTAGGCTTCTCAGACTGGCCTCAACTGGAACTTATCCTCCTGGTCTTCATTTCGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060434.5 ENSMUST00000213776.2 |
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