Pregenerated sensors for OLFR1383 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000107417Ensembl transcript IDs: ENSMUST00000077143.7, ENSMUST00000204706.3
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAAAAGTTGCTCCTTGTTTGTGGGATATGTTCTTCTATCTGGGCTaGATTGTCTGGCCTCAGTGGGAAAGGAAGCGCTTAGCCTCACAG | + |
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Preference number: 1 (lower is better) Translates to: PKVAPCLWDMFFYLG*IVWPQWERKRLASQ Trigger: CTGTGAGGCTAAGCGCTTCCTTTCCCACTGAGGCCAGACAATGCAGCCCAGATAGAAGAACATATCCCACAAACAAGGAGCAACTTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CCA 90 bp | GCTCCTTGTTTGTGGGATATGTTCTTCTATCTGGGCTGCATTGTCTaGCCTCAGTGGGAAAGGAAGCGCTTAGCCTCACAGAGACTTGAA | + |
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Preference number: 1 (lower is better) Translates to: APCLWDMFFYLGCIV*PQWERKRLASQRLE Trigger: TTCAAGTCTCTGTGAGGCTAAGCGCTTCCTTTCCCACTGAGGCCAGACAATGCAGCCCAGATAGAAGAACATATCCCACAAACAAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CCA 90 bp | TTCTCTCGCTCTCAATTATACTTAGAGTCCACGTCCATTCTCCTATaGAGAATCGCTATACCTCTCTCCCAGACTCATTCCTTGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: FSRSQLYLESTSILL*RIAIPLSQTHSLEK Trigger: TTTCTCCAAGGAATGAGTCTGGGAGAGAGGTATAGCGATTCTCCATAGGAGAATGGACGTGGACTCTAAGTATAATTGAGAGCGAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR GCA 90 bp | AATTTGATGTGCTCCATGAAATATTTCTGTTCCTGTTGCTTTAATTaGCACCCACATCATAGAATTGCAACCACTGTATCAGAAATGGGC | + |
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Preference number: 1 (lower is better) Translates to: NLMCSMKYFCSCCFN*HPHHRIATTVSEMG Trigger: GCCCATTTCTGATACAGTGGTTGCAATTCTATGATGTGGGTGGCAATTAAAGCAACAGGAACAGAAATATTTCATGGAGCACATCAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR GCA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCTTCTTCTATCTGGGCTaGATTGTCTGGCCTCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVFFYLG*IVWPQW Trigger: CCACTGAGGCCAGACAATGCAGCCCAGATAGAAGAA...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CAA 90 bp | AAGATGCTCTATGTAATGGGGGCCATCCCAAAAGTTGCTCCTTGTTaGTGGGATATGTTCTTCTATCTGGGCTGCATTGTCTGGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: KMLYVMGAIPKVAPC*WDMFFYLGCIVWPQ Trigger: CTGAGGCCAGACAATGCAGCCCAGATAGAAGAACATATCCCACAAACAAGGAGCAACTTTTGGGATGGCCCCCATTACATAGAGCATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR TCA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCCCTGGCATCACATTGTaGATATTGACTTGGGTATGG | + |
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Preference number: 2 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVPGITL*ILTWVW Trigger: CCATACCCAAGTCAATATTCACAATGTGATGCCAGG...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR GCA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCGGCCATCCCAAAAGTTaGTCCTTGTTTGTGGGATAT | + |
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Preference number: 2 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVGHPKS*SLFVGY Trigger: ATATCCCACAAACAAGGAGCAACTTTTGGGATGGCC...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CAA 90 bp | TATGCTATTTTGTCTACTTCCCTGTTAATAACCTTGAGATATCACTaGCCATGTTCCACCTGCACTGCTCCTACTCCAATAGCCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: YAILSTSLLITLRYH*PCSTCTAPTPIAWP Trigger: GGGCCAGGCTATTGGAGTAGGAGCAGTGCAGGTGGAACATGGCAAGTGATATCTCAAGGTTATTAACAGGGAAGTAGACAAAATAGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR TCA 90 bp | TATTTCTGTTCCTGTTGCTTTAATTGCCACCCACATCATAGAATTGCAACCACTCCCTCTCCTTTCTGCTaGCTCCAGGTTGTAGGCATC | + |
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Preference number: 2 (lower is better) Translates to: YFCSCCFNCHPHHRIATTPSPFC*LQVVGI Trigger: GATGCCTACAACCTGGAGTCAGCAGAAAGGAGAGGG...AGTGGTTGCAATTCTATGATGTGGGTGGCAATTAAAGCAACAGGAACAGAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR TCA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCATGGCCACACACTCATaGTCTACATACACAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVMATHS*STYTKQ Trigger: TTGCTTTGTGTATGTAGATCATGAGTGTGTGGCCAT...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCTTCTATCTGGGCTGCATTGTCTGGCCTCAGTGGGAAAGGAAGCGCTTACTTGGCATTTGCCTTTaGAATAATGCCTTTTACCTG | + |
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Preference number: 2 (lower is better) Translates to: MFFYLGCIVWPQWERKRLLGICL*NNAFYL Trigger: CAGGTAAAAGGCATTATTTCAAAGGCAAATGCCAAG...TAAGCGCTTCCTTTCCCACTGAGGCCAGACAATGCAGCCCAGATAGAAGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR TCA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCTCAGGGGTTCACATCTaGTTCTGTTTCATTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVSGVHI*FCFISS Trigger: TGAGGAAATGAAACAGAATCAGATGTGAACCCCTGA...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR GCA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCCCAATTGCCTTCTCTTaGACAAGTTTACAGTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVPIAFS*TSLQFQ Trigger: CTGGAACTGTAAACTTGTGCAAGAGAAGGCAATTGG...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTTCTTCTATCTGGGCTGCATTGTCTGGCCTCAGTGGGAAAGGAAGCGCTTACCCAGACTCATTCCTTaGAGAAATTATGACACAAAG | + |
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Preference number: 2 (lower is better) Translates to: MFFYLGCIVWPQWERKRLPRLIP*RNYDTK Trigger: CTTTGTGTCATAATTTCTCCAAGGAATGAGTCTGGG...TAAGCGCTTCCTTTCCCACTGAGGCCAGACAATGCAGCCCAGATAGAAGAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR TCA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCACAGAATTTGACATTTaGATACAAGCAGCACCAGAC | + |
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Preference number: 2 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVTEFDI*IQAAPD Trigger: GTCTGGTGCTGCTTGTATTCAAATGTCAAATTCTGT...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR TCA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCATTCTCAAGCTTCTGTaGGTAAAACCAGATCAACCA | + |
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Preference number: 2 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVILKLL*VKPDQP Trigger: TGGTTGATCTGGTTTTACTCACAGAAGCTTGAGAAT...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR GCA 90 bp | ATGTTCTTCTATCTGGGCTGCATTGTCTGGCCTCAGTGGGAAAGGAAGCGCTTAGTATACATGAAGATCTaGTCATCTTGGAGCAATCAT | + |
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Preference number: 2 (lower is better) Translates to: MFFYLGCIVWPQWERKRLVYMKI*SSWSNH Trigger: ATGATTGCTCCAAGATGAGCAGATCTTCATGTATAC...TAAGCGCTTCCTTTCCCACTGAGGCCAGACAATGCAGCCCAGATAGAAGAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR GCA 90 bp | CAATGCCTGGCATCAACAATTCCTGTTATCAGAAAAGAAGTCTCCTATAAAGTGAGCCCAAGGAACATTTaGTCTGCCCTCTCCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QCLASTIPVIRKEVSYKVSPRNI*SALSFL Trigger: CAGAAAGGAGAGGGCAGAGCAAATGTTCCTTGGGCT...CACTTTATAGGAGACTTCTTTTCTGATAACAGGAATTGTTGATGCCAGGCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR GCA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCTATTTCTGTTCCTGTTaGTTTAATTGCCACCCACAT | + |
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Preference number: 2 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVYFCSC*FNCHPH Trigger: ATGTGGGTGGCAATTAAAGCAACAGGAACAGAAATA...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTTAGGGAAATTCAAGATTAACATAGGAGAAACTTGTAGCAGGGGACATTGTCTGGGCTGCATTGTCTaGCCTCAGTGGGAAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ILGKFKINIGETCSRGHCLGCIV*PQWERK Trigger: CTTCCTTTCCCACTGAGGCCAGACAATGCAGCCCAG...ACAATGTCCCCTGCTACAAGTTTCTCCTATGTTAATCTTGAATTTCCCTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR GCA 90 bp | CAATGCCTGGCATCAACAATTCCTGTTATCAGAAAAGAAGTCTCCTATAAAGTGAAGGAACATTTGCTCTaGCCTCTCCTTTCTGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: QCLASTIPVIRKEVSYKVKEHLL*PLLSAD Trigger: GTCAGCAGAAAGGAGAGGGCAGAGCAAATGTTCCTT...CACTTTATAGGAGACTTCTTTTCTGATAACAGGAATTGTTGATGCCAGGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR GCA 90 bp | CAATGCCTGGCATCAACAATTCCTGTTATCAGAAAAGAAGTCTCCTATAAAGTGCCTTCTTATGATCTCTaGCTGAGATCCCAAGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: QCLASTIPVIRKEVSYKVPSYDL*LRSQAQ Trigger: TTGGGCTTGGGATCTCAGGCAGAGATCATAAGAAGG...CACTTTATAGGAGACTTCTTTTCTGATAACAGGAATTGTTGATGCCAGGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTTAGGGAAATTCAAGATTAACATAGGAGAAACTTGTAGCAGGGGACATTGTACCAAGAGTGACCACTaGGGCAGTGAGCAGGATGTA | + |
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Preference number: 2 (lower is better) Translates to: ILGKFKINIGETCSRGHCTKSDH*GSEQDV Trigger: TACATCCTGCTCACTGCCCCAGTGGTCACTCTTGGT...ACAATGTCCCCTGCTACAAGTTTCTCCTATGTTAATCTTGAATTTCCCTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR TCA 90 bp | TATTTCTGTTCCTGTTGCTTTAATTGCCACCCACATCATAGAATTGCAACCACTCTTTTCTCCTTCTTATaGTCTCTGCCTGAGATCCCA | + |
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Preference number: 2 (lower is better) Translates to: YFCSCCFNCHPHHRIATTLFSFL*SLPEIP Trigger: TGGGATCTCAGGCAGAGATCATAAGAAGGAGAAAAG...AGTGGTTGCAATTCTATGATGTGGGTGGCAATTAAAGCAACAGGAACAGAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR TCA 90 bp | CAATGCCTGGCATCAACAATTCCTGTTATCAGAAAAGAAGTCTCCTATAAAGTGAATCATGATGCCTACTaGGGAATATCTTCTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: QCLASTIPVIRKEVSYKVNHDAY*GISSGE Trigger: TTCTCCAGAAGATATTCCTCAGTAGGCATCATGATT...CACTTTATAGGAGACTTCTTTTCTGATAACAGGAATTGTTGATGCCAGGCATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CAA 90 bp | ATACATGTCCAAGGTCAGAACTACTTAGGAGAAATGTATGAACTCTaGGCATTTGCCTTTGAAATAATGCCTTTTACCTGGCATCACATT | + |
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Preference number: 2 (lower is better) Translates to: IHVQGQNYLGEMYEL*AFAFEIMPFTWHHI Trigger: AATGTGATGCCAGGTAAAAGGCATTATTTCAAAGGCAAATGCCAAGAGTTCATACATTTCTCCTAAGTAGTTCTGACCTTGGACATGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR TCA 90 bp | CAATGCCTGGCATCAACAATTCCTGTTATCAGAAAAGAAGTCTCCTATAAAGTGTTGGGATACAGAATTTaGCATTTGAATACAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: QCLASTIPVIRKEVSYKVLGYRI*HLNTSS Trigger: GCTGCTTGTATTCAAATGTCAAATTCTGTATCCCAA...CACTTTATAGGAGACTTCTTTTCTGATAACAGGAATTGTTGATGCCAGGCATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CCA 72 bp | TTGTGGGATATGTTCTTCTATCTGGGCTGCATTGTCTaGCCTCAGTGGGAAAGGAAGCGCTTAGCCTCACAG | + |
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Preference number: 3 (lower is better) Translates to: LWDMFFYLGCIV*PQWERKRLASQ Trigger: CTGTGAGGCTAAGCGCTTCCTTTCCCACTGAGGCCAGACAATGCAGCCCAGATAGAAGAACATATCCCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR GCA 72 bp | GCTCCTTGTTTGTGGGATATGTTCTTCTATCTGGGCTaGATTGTCTGGCCTCAGTGGGAAAGGAAGCGCTTA | + |
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Preference number: 3 (lower is better) Translates to: APCLWDMFFYLG*IVWPQWERKRL Trigger: TAAGCGCTTCCTTTCCCACTGAGGCCAGACAATGCAGCCCAGATAGAAGAACATATCCCACAAACAAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CCA 72 bp | GTAATGGGGGCCATCCCAAAAGTTGCTCCTTGTTTGTaGGATATGTTCTTCTATCTGGGCTGCATTGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: VMGAIPKVAPCL*DMFFYLGCIVW Trigger: CCAGACAATGCAGCCCAGATAGAAGAACATATCCCACAAACAAGGAGCAACTTTTGGGATGGCCCCCATTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR CAA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCAACCAGATCAACCAATaGCCTTCTCTTGCACAAGTT | + |
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Preference number: 3 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVNQINQ*PSLAQV Trigger: AACTTGTGCAAGAGAAGGCAATTGGTTGATCTGGTT...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR CAA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCACCCACATCATAGAATaGCAACCACTGTATCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVTHIIE*QPLYQK Trigger: TTTCTGATACAGTGGTTGCAATTCTATGATGTGGGT...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR TCA 72 bp | TTGGCGGGCAAGGTTTACAACAAAAGCTGGTATACATaGAGATCTGCTCATCTTGGAGCAATCATGTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: LAGKVYNKSWYT*RSAHLGAIMCW Trigger: CCAACACATGATTGCTCCAAGATGAGCAGATCTTCATGTATACCAGCTTTTGTTGTAAACCTTGCCCGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CCA 72 bp | TCTCAATTATACTTAGAGTCCACGTCCATTCTCCTATaGAGAATCGCTATACCTCTCTCCCAGACTCATTCC | + |
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Preference number: 3 (lower is better) Translates to: SQLYLESTSILL*RIAIPLSQTHS Trigger: GGAATGAGTCTGGGAGAGAGGTATAGCGATTCTCCATAGGAGAATGGACGTGGACTCTAAGTATAATTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR CAA 90 bp | TATTTCTGTTCCTGTTGCTTTAATTGCCACCCACATCATAGAATTGCAACCACTAAGCCCAAGGAACATTaGCTCTGCCCTCTCCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: YFCSCCFNCHPHHRIATTKPKEH*LCPLLS Trigger: AGAAAGGAGAGGGCAGAGCAAATGTTCCTTGGGCTT...AGTGGTTGCAATTCTATGATGTGGGTGGCAATTAAAGCAACAGGAACAGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR CAA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCAAAGTTGCTCCTTGTTaGTGGGATATGTTCTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVKVAPC*WDMFFY Trigger: ATAGAAGAACATATCCCACAAACAAGGAGCAACTTT...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR GCA 72 bp | TCTCAAGCTTCTGTGAGTAAAACCAGATCAACCAATTaGCTTCTCTTGCACAAGTTTACAGTTCCAGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: SQASVSKTRSTN*LLLHKFTVPVP Trigger: AGGGACTGGAACTGTAAACTTGTGCAAGAGAAGGCAATTGGTTGATCTGGTTTTACTCACAGAAGCTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR CAA 90 bp | ATTTTAGGGAAATTCAAGATTAACATAGGAGAAACTTGTAGCAGGGGACATTGTTCTATCTGGGCTGCATaGTCTGGCCTCAGTGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: ILGKFKINIGETCSRGHCSIWAA*SGLSGK Trigger: TTTCCCACTGAGGCCAGACAATGCAGCCCAGATAGA...ACAATGTCCCCTGCTACAAGTTTCTCCTATGTTAATCTTGAATTTCCCTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR CAA 90 bp | GTCCCTAGAACAATGCCTGGCATCAACAATTCCTGTTATCAGAAAAGAAGTCTCGTTGGGATACAGAATTaGACATTTGAATACAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: VPRTMPGINNSCYQKRSLVGIQN*TFEYKQ Trigger: CTGCTTGTATTCAAATGTCAAATTCTGTATCCCAAC...GAGACTTCTTTTCTGATAACAGGAATTGTTGATGCCAGGCATTGTTCTAGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR GCA 72 bp | TCTTGCACAAGTTTACAGTTCCAGTCCCTAGAACAATaGCTGGCATCAACAATTCCTGTTATCAGAAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: SCTSLQFQSLEQ*LASTIPVIRKE Trigger: TTCTTTTCTGATAACAGGAATTGTTGATGCCAGGCATTGTTCTAGGGACTGGAACTGTAAACTTGTGCAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR TCA 72 bp | AAGAACCATGGGTTACACAGAGCTGCTTATCTTTGGTaGCTGTTTCCTGGGCTAAAGTCTAAAGAAAATTAT | + |
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Preference number: 3 (lower is better) Translates to: KNHGLHRAAYLW*LFPGLKSKENY Trigger: ATAATTTTCTTTAGACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGGTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR-3UTR CAA 90 bp | TATTTCTGTTCCTGTTGCTTTAATTGCCACCCACATCATAGAATTGCAACCACTACCCTCTATGCTATTTaGTCTACTTCCCTGTTAATA | + |
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Preference number: 3 (lower is better) Translates to: YFCSCCFNCHPHHRIATTTLYAI*STSLLI Trigger: TATTAACAGGGAAGTAGACAAAATAGCATAGAGGGT...AGTGGTTGCAATTCTATGATGTGGGTGGCAATTAAAGCAACAGGAACAGAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR GCA 72 bp | AATTTGATGTGCTCCATGAAATATTTCTGTTCCTGTTaGTTTAATTGCCACCCACATCATAGAATTGCAACC | + |
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Preference number: 3 (lower is better) Translates to: NLMCSMKYFCSC*FNCHPHHRIAT Trigger: GGTTGCAATTCTATGATGTGGGTGGCAATTAAAGCAACAGGAACAGAAATATTTCATGGAGCACATCAAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| CDS-3UTR CCA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCCCACCCAGGAGGAGATaGCCAATGCATGGCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVPPRRR*PMHGRE Trigger: TTCTCTGCCATGCATTGGCCATCTCCTCCTGGGTGG...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| CDS-3UTR GCA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCCTCTCCCTAGTACCTTaGATAGAGCCCCCTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVLSLVP*IEPPSH Trigger: ATGTGAAGGGGGCTCTATGCAAGGTACTAGGGAGAG...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| CDS-3UTR TCA 90 bp | CCATGGGTTACACAGAGCTGCTTATCTTTGGTGACTGTTTCCTGGGCTAAAGTCAGAAGCCCATCAAAATaGAGCCACCTTTTAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PWVTQSCLSLVTVSWAKVRSPSK*SHLLRW Trigger: CCACCTTAAAAGGTGGCTTCATTTTGATGGGCTTCT...GACTTTAGCCCAGGAAACAGTCACCAAAGATAAGCAGCTCTGTGTAACCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CAA 72 bp | GCTCTATGTAATGGGGGCCATCCCAAAAGTTGCTCCTaGTTTGTGGGATATGTTCTTCTATCTGGGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: ALCNGGHPKSCS*FVGYVLLSGLH Trigger: ATGCAGCCCAGATAGAAGAACATATCCCACAAACAAGGAGCAACTTTTGGGATGGCCCCCATTACATAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CAA 72 bp | TATGTAATGGGGGCCATCCCAAAAGTTGCTCCTTGTTaGTGGGATATGTTCTTCTATCTGGGCTGCATTGTC | + |
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Preference number: 4 (lower is better) Translates to: YVMGAIPKVAPC*WDMFFYLGCIV Trigger: GACAATGCAGCCCAGATAGAAGAACATATCCCACAAACAAGGAGCAACTTTTGGGATGGCCCCCATTACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CAA 72 bp | CTCATCTTGGAGCAATCATGTGTTGGGATACAGAATTaGACATTTGAATACAAGCAGCACCAGACCAACCAC | + |
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Preference number: 4 (lower is better) Translates to: LILEQSCVGIQN*TFEYKQHQTNH Trigger: GTGGTTGGTCTGGTGCTGCTTGTATTCAAATGTCAAATTCTGTATCCCAACACATGATTGCTCCAAGATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| CDS-3UTR TCA 90 bp | TATTTCTGTTCCTGTTGCTTTAATTGCCACCCACATCATAGAATTGCAACCACTATGATGAGGCTTGTCTaGGTCAGAGAGTTCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: YFCSCCFNCHPHHRIATTMMRLV*VREFTR Trigger: CCTTGTGAACTCTCTGACTCAGACAAGCCTCATCAT...AGTGGTTGCAATTCTATGATGTGGGTGGCAATTAAAGCAACAGGAACAGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| CDS-3UTR CCA 90 bp | GTCCCTAGAACAATGCCTGGCATCAACAATTCCTGTTATCAGAAAAGAAGTCTCACCCAGCATAGCTCATaGTCTTGTCAATTCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VPRTMPGINNSCYQKRSLTQHSS*SCQFQK Trigger: TTTCTGGAATTGACAAGACCATGAGCTATGCTGGGT...GAGACTTCTTTTCTGATAACAGGAATTGTTGATGCCAGGCATTGTTCTAGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CAA 72 bp | ACTAGAGCTGAGGAGATGTCTACCCTCTATGCTATTTaGTCTACTTCCCTGTTAATAACCTTGAGATATCAC | + |
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Preference number: 4 (lower is better) Translates to: TRAEEMSTLYAI*STSLLITLRYH Trigger: GTGATATCTCAAGGTTATTAACAGGGAAGTAGACAAAATAGCATAGAGGGTAGACATCTCCTCAGCTCTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| CDS-3UTR TCA 90 bp | ATTTTAGGGAAATTCAAGATTAACATAGGAGAAACTTGTAGCAGGGGACATTGTATATTGACAAGAAGCTaGGGTACAATGCTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: ILGKFKINIGETCSRGHCILTRS*GTMLVV Trigger: CACCACCAGCATTGTACCTCAGCTTCTTGTCAATAT...ACAATGTCCCCTGCTACAAGTTTCTCCTATGTTAATCTTGAATTTCCCTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| 3UTR CAA 72 bp | CAAGGTCAGAACTACTTAGGAGAAATGTATGAACTCTaGGCATTTGCCTTTGAAATAATGCCTTTTACCTGG | + |
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Preference number: 4 (lower is better) Translates to: QGQNYLGEMYEL*AFAFEIMPFTW Trigger: CCAGGTAAAAGGCATTATTTCAAAGGCAAATGCCAAGAGTTCATACATTTCTCCTAAGTAGTTCTGACCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| CDS-3UTR TCA 90 bp | ATTTTAGGGAAATTCAAGATTAACATAGGAGAAACTTGTAGCAGGGGACATTGTCAATTCCAGAAATATTaGCAAGAAGCTGAGGTACAA | + |
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Preference number: 4 (lower is better) Translates to: ILGKFKINIGETCSRGHCQFQKY*QEAEVQ Trigger: TTGTACCTCAGCTTCTTGTCAATATTTCTGGAATTG...ACAATGTCCCCTGCTACAAGTTTCTCCTATGTTAATCTTGAATTTCCCTAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| CDS TCA 90 bp | AAGGTGGGACCCACAAGTCCCCAGGGCCTTTCTGCGCCCAGATCTTaGCTTGATCTTCAACACTGCATGAGCAATGTGTGCATAGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: KVGPTSPQGLSAPRS*LDLQHCMSNVCIGA Trigger: GGCACCTATGCACACATTGCTCATGCAGTGTTGAAGATCAAGTCAAGATCTGGGCGCAGAAAGGCCCTGGGGACTTGTGGGTCCCACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077143.7 ENSMUST00000204706.3 |
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| CDS-3UTR CAA 90 bp | GTCCCTAGAACAATGCCTGGCATCAACAATTCCTGTTATCAGAAAAGAAGTCTCTCTCTCCCTAGTACCTaGCATAGAGCCCCCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: VPRTMPGINNSCYQKRSLSLPST*HRAPFT Trigger: TGTGAAGGGGGCTCTATGCAAGGTACTAGGGAGAGA...GAGACTTCTTTTCTGATAACAGGAATTGTTGATGCCAGGCATTGTTCTAGGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| CDS-3UTR CAA 90 bp | ATTTTAGGGAAATTCAAGATTAACATAGGAGAAACTTGTAGCAGGGGACATTGTCCAGCCACAAACAAGTaGGCCTCTGTTCCTCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: ILGKFKINIGETCSRGHCPATNK*ASVPPV Trigger: CACAGGAGGAACAGAGGCCAACTTGTTTGTGGCTGG...ACAATGTCCCCTGCTACAAGTTTCTCCTATGTTAATCTTGAATTTCCCTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204706.3 |
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| CDS TCA 72 bp | CAGCATAGCTCATGGTCTTGTCAATTCCAGAAATATTaGCAAGAAGCTGAGGTACAATGCTGGTGGTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: QHSSWSCQFQKY*QEAEVQCWWCS Trigger: GCTACACCACCAGCATTGTACCTCAGCTTCTTGTCAATATTTCTGGAATTGACAAGACCATGAGCTATGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077143.7 ENSMUST00000204706.3 |
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