Pregenerated sensors for OLFR1381 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095187Ensembl transcript IDs: ENSMUST00000167248.3, ENSMUST00000213256.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCTTTTCAGCACTAGATGGCAGGCTAAGCCCAGGTTAGCCACATaGACACAACTGGTGTGTGTCAGTGTTTCAGAGGCAGAGGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: CLFSTRWQAKPRLAT*TQLVCVSVSEAEGD Trigger: GTCACCCTCTGCCTCTGAAACACTGACACACACCAGTTGTGTGCATGTGGCTAACCTGGGCTTAGCCTGCCATCTAGTGCTGAAAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR TCA 90 bp | AGCCAGGTCCAGTGTCTCTCCCTTCCTGCTGCCTGTGGATCTGCATaGAGAACTTATAGCTTCTTCTCCAGCACCATGTCTATCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: SQVQCLSLPAACGSA*RTYSFFSSTMSICV Trigger: CACACAGATAGACATGGTGCTGGAGAAGAAGCTATAAGTTCTTCATGCAGATCCACAGGCAGCAGGAAGGGAGAGACACTGGACCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR TCA 90 bp | CCTTGGCTTCTGCATCAGTGTCTGCCTCCTTGTTCCCACACAGTTTaGGTTCCTGCTTCCTTCAATGTACTGTGGCTCAGGATGACAATA | + |
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Preference number: 1 (lower is better) Translates to: PWLLHQCLPPCSHTV*VPASFNVLWLRMTI Trigger: TATTGTCATCCTGAGCCACAGTACATTGAAGGAAGCAGGAACTCAAACTGTGTGGGAACAAGGAGGCAGACACTGATGCAGAAGCCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR CCA 90 bp | CTGATTGTCCTTGGTTGTATAAGAAATCAGGCTGAGAAAGCCATGTaGAACAAGCCAGTGAGCAGCACTCCTCCTTGGCTTCTGCATCAG | + |
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Preference number: 1 (lower is better) Translates to: LIVLGCIRNQAEKAM*NKPVSSTPPWLLHQ Trigger: CTGATGCAGAAGCCAAGGAGGAGTGCTGCTCACTGGCTTGTTCCACATGGCTTTCTCAGCCTGATTTCTTATACAACCAAGGACAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR TCA 90 bp | CCAGAGAGATCTACAAACTTCAGCTGCTGTGTTGTTCAGCAAGTGTaGGCAGAGTCCCAAGAAGGTTGCTTTCATGCTACAATCCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: PERSTNFSCCVVQQV*AESQEGCFHATILS Trigger: GGAGAGGATTGTAGCATGAAAGCAACCTTCTTGGGACTCTGCTCACACTTGCTGAACAACACAGCAGCTGAAGTTTGTAGATCTCTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR TCA 90 bp | ATTGATCTACCTGTCTGTCACTGTACCAGCACCATGCAGTTTTTATaGCAATTGCTCTGTGGTCAGCTTGAGGTCAGGGATGGTGATTCC | + |
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Preference number: 1 (lower is better) Translates to: IDLPVCHCTSTMQFL*QLLCGQLEVRDGDS Trigger: GGAATCACCATCCCTGACCTCAAGCTGACCACAGAGCAATTGTCATAAAAACTGCATGGTGCTGGTACAGTGACAGACAGGTAGATCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR GCA 90 bp | TACCTGTCTGTCACTGTACCAGCACCATGCAGTTTTTATGACAATTaGTCTGTGGTCAGCTTGAGGTCAGGGATGGTGATTCCACAATGT | + |
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Preference number: 1 (lower is better) Translates to: YLSVTVPAPCSFYDN*SVVSLRSGMVIPQC Trigger: ACATTGTGGAATCACCATCCCTGACCTCAAGCTGACCACAGAGCAATTGTCATAAAAACTGCATGGTGCTGGTACAGTGACAGACAGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR GCA 90 bp | GCCTTGGATTATGATGAGTTGGGTGTTCCTCTCTCTCCACATCCTTaGCAGCATCTGCTGTCACCTGAATTTCTAATCTTAGCCATTCTG | + |
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Preference number: 1 (lower is better) Translates to: ALDYDELGVPLSPHP*QHLLSPEFLILAIL Trigger: CAGAATGGCTAAGATTAGAAATTCAGGTGACAGCAGATGCTGGCAAGGATGTGGAGAGAGAGGAACACCCAACTCATCATAATCCAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR GCA 90 bp | TGTTGTTCAGCAAGTGTGAGCAGAGTCCCAAGAAGGTTGCTTTCATaGTACAATCCTCTCCGTATCCCAGTAAGTGCCTCATTTGTAACC | + |
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Preference number: 1 (lower is better) Translates to: CCSASVSRVPRRLLS*YNPLRIPVSASFVT Trigger: GGTTACAAATGAGGCACTTACTGGGATACGGAGAGGATTGTAGCATGAAAGCAACCTTCTTGGGACTCTGCTCACACTTGCTGAACAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR TCA 90 bp | TGTCTATCTGTGTGCTGTCATGTCAGCGTATTGGATTACGTGGGATaGGTGATTGAAGAAAGCGAGACACTGCAGGATGTATTTACTACC | + |
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Preference number: 1 (lower is better) Translates to: CLSVCCHVSVLDYVG*VIEESETLQDVFTT Trigger: GGTAGTAAATACATCCTGCAGTGTCTCGCTTTCTTCAATCACTCATCCCACGTAATCCAATACGCTGACATGACAGCACACAGATAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR CCA 90 bp | GAGTTATATTGTCTCACTCTTCCAGACCTTCATGGTTGGAATATGTaGGGTGTGAATGAGGATGGCCCTCATAGGCACATACATTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: ELYCLTLPDLHGWNM*GVNEDGPHRHIHLK Trigger: TTTCAAATGTATGTGCCTATGAGGGCCATCCTCATTCACACCCCACATATTCCAACCATGAAGGTCTGGAAGAGTGAGACAATATAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR CCA 90 bp | TTCGAGGCTTTCCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTaGTTTTATGTGAAGTTCCTTGATCCATTTAGACTTGAGCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: FEAFPHFLLYKFQCL*FYVKFLDPFRLELC Trigger: ACAAAGCTCAAGTCTAAATGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGGAAAGCCTCGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR TCA 90 bp | TCCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTaGAGTTCCTTGATCCATTTAGACTTGAGCTTTGTACATGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: SPTFSSISFSVSGFM*SSLIHLDLSFVHGD Trigger: ATCTCCATGTACAAAGCTCAAGTCTAAATGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR TCA 90 bp | AATGAAAGTCTAGGTGTTTATTCCAGCCTTTCAGATCTGACTTTGTaGTTGTTCTTGCAGACATTTAAAGCAGGTTTCATTTCAGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: NESLGVYSSLSDLTL*LFLQTFKAGFISVS Trigger: AGAGACTGAAATGAAACCTGCTTTAAATGTCTGCAAGAACAATCACAAAGTCAGATCTGAAAGGCTGGAATAAACACCTAGACTTTCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR CAA 90 bp | TCCTTGGCTTCTGCATCAGTGTCTGCCTCCTTGTTCCCACACAGTTaGAGTTCCTGCTTCCTTCAATGTACTGTGGCTCAGGATGACAAT | + |
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Preference number: 2 (lower is better) Translates to: SLASASVSASLFPHS*SSCFLQCTVAQDDN Trigger: ATTGTCATCCTGAGCCACAGTACATTGAAGGAAGCAGGAACTCAAACTGTGTGGGAACAAGGAGGCAGACACTGATGCAGAAGCCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTGGTGGGACCACCTCTGGGCTGATTGTCCTTGGTTGTATAAGAAATCAGGCCTCCTACATGCTAACTaGCTGTTGAGCCAACACTGT | + |
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Preference number: 2 (lower is better) Translates to: CWWDHLWADCPWLYKKSGLLHAN*LLSQHC Trigger: ACAGTGTTGGCTCAACAGGCAGTTAGCATGTAGGAG...GCCTGATTTCTTATACAACCAAGGACAATCAGCCCAGAGGTGGTCCCACCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGTGGGACCACCTCTGGGCTGATTGTCCTTGGTTGTATAAGAAATCAGGCTACCTAGGCAGTAGGTaGATCAGACTCTCAAGGACT | + |
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Preference number: 2 (lower is better) Translates to: CWWDHLWADCPWLYKKSGYLGSR*IRLSRT Trigger: AGTCCTTGAGAGTCTGATCCACCTACTGCCTAGGTA...GCCTGATTTCTTATACAACCAAGGACAATCAGCCCAGAGGTGGTCCCACCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTGGTGGGACCACCTCTGGGCTGATTGTCCTTGGTTGTATAAGAAATCAGGCTGTTCCCACACAGTTTaGGTTCCTGCTTCCTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: CWWDHLWADCPWLYKKSGCSHTV*VPASFN Trigger: ATTGAAGGAAGCAGGAACTCAAACTGTGTGGGAACA...GCCTGATTTCTTATACAACCAAGGACAATCAGCCCAGAGGTGGTCCCACCAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTCTGGAGTCACCTTTGCCTTTTCAGCACTAGATGGCAGGCTAAGCCCAGGTACTGTACCAGCACCATaGAGTTTTTATGACAATTGC | + |
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Preference number: 2 (lower is better) Translates to: ESGVTFAFSALDGRLSPGTVPAP*SFYDNC Trigger: GCAATTGTCATAAAAACTGCATGGTGCTGGTACAGT...ACCTGGGCTTAGCCTGCCATCTAGTGCTGAAAAGGCAAAGGTGACTCCAGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTCTGGAGTCACCTTTGCCTTTTCAGCACTAGATGGCAGGCTAAGCCCAGGTATTGACAGTGTCCTTTaGCTTACAGAAGCTTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: ESGVTFAFSALDGRLSPGIDSVL*LTEALQ Trigger: TTGCAAAGCTTCTGTAAGGCAAAGGACACTGTCAAT...ACCTGGGCTTAGCCTGCCATCTAGTGCTGAAAAGGCAAAGGTGACTCCAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGTGGGACCACCTCTGGGCTGATTGTCCTTGGTTGTATAAGAAATCAGGCTCTTCCAGACCTTCATaGTTGGAATATGTGGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: CWWDHLWADCPWLYKKSGSSRPS*LEYVGC Trigger: ACACCCCACATATTCCAACCATGAAGGTCTGGAAGA...GCCTGATTTCTTATACAACCAAGGACAATCAGCCCAGAGGTGGTCCCACCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR CAA 90 bp | GCAGTAGGTGGATCAGACTCTCAAGGACTGAACTTTGAACCTGGTTaGCAGAGCCTCCTTATTGTCACACAAAAGGCACTTTTAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: AVGGSDSQGLNFEPG*QSLLIVTQKALLAS Trigger: GCTTGCTAAAAGTGCCTTTTGTGTGACAATAAGGAGGCTCTGCAAACCAGGTTCAAAGTTCAGTCCTTGAGAGTCTGATCCACCTACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGTGGGACCACCTCTGGGCTGATTGTCCTTGGTTGTATAAGAAATCAGGCTCCTTCAATGTACTGTaGCTCAGGATGACAATACAT | + |
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Preference number: 2 (lower is better) Translates to: CWWDHLWADCPWLYKKSGSFNVL*LRMTIH Trigger: ATGTATTGTCATCCTGAGCCACAGTACATTGAAGGA...GCCTGATTTCTTATACAACCAAGGACAATCAGCCCAGAGGTGGTCCCACCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR CAA 90 bp | GTACCAGCACCATGCAGTTTTTATGACAATTGCTCTGTGGTCAGCTaGAGGTCAGGGATGGTGATTCCACAATGTAATGAAAGTAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: VPAPCSFYDNCSVVS*RSGMVIPQCNESSV Trigger: GACACTACTTTCATTACATTGTGGAATCACCATCCCTGACCTCAAGCTGACCACAGAGCAATTGTCATAAAAACTGCATGGTGCTGGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR TCA 90 bp | CTAACTAAGATGCTAGGTGTGAATGAACAAATTGAGTTCCCAGGAATACTTTGCACGTGTGGCCTTGTTTaGAGAAGTGTGTCACTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LTKMLGVNEQIEFPGILCTCGLV*RSVSLG Trigger: GCCCAGTGACACACTTCTTCAAACAAGGCCACACGT...GCAAAGTATTCCTGGGAACTCAATTTGTTCATTCACACCTAGCATCTTAGTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR GCA 90 bp | CTAACTAAGATGCTAGGTGTGAATGAACAAATTGAGTTCCCAGGAATACTTTGCCCCAGGTTAGCCACATaGACACAACTGGTGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: LTKMLGVNEQIEFPGILCPRLAT*TQLVCV Trigger: GACACACACCAGTTGTGTGCATGTGGCTAACCTGGG...GCAAAGTATTCCTGGGAACTCAATTTGTTCATTCACACCTAGCATCTTAGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCCTTATTGTCACACAAAAGGCACTTTTAGCAAGCCAATTTCTGCACTCCGTGACCATAGGTGTGTaGATTCATTTCTGGGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SLLIVTQKALLASQFLHSVTIGV*IHFWVF Trigger: GAAGACCCAGAAATGAATCCACACACCTATGGTCAC...GGAGTGCAGAAATTGGCTTGCTAAAAGTGCCTTTTGTGTGACAATAAGGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGTTGTTCAGCAAGTGTGAGCAGAGTCCCAAGAAGGTTGCTTTCATGCTACTGTCTTCTTTCCACTaGATAGTTTTAGCTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: AVLFSKCEQSPKKVAFMLLSSFH*IVLAPL Trigger: CAAAGGAGCTAAAACTATCCAGTGGAAAGAAGACAG...TAGCATGAAAGCAACCTTCTTGGGACTCTGCTCACACTTGCTGAACAACACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTGTCTGTGGAGAGAAGCAAGTAATTCCACTGGTTCTAGATAGATTAGCCCAAGCCATTGTTGTTTaGTTCAGGAGTCTTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: QCVCGEKQVIPLVLDRLAQAIVV*FRSLSP Trigger: AGGGGAAAGACTCCTGAACCAAACAACAATGGCTTG...GGCTAATCTATCTAGAACCAGTGGAATTACTTGCTTCTCTCCACAGACACACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCCTTATTGTCACACAAAAGGCACTTTTAGCAAGCCAATTTCTGCACTCCTGGATTATGATGAGTTaGGTGTTCCTCTCTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SLLIVTQKALLASQFLHSWIMMS*VFLSLH Trigger: GTGGAGAGAGAGGAACACCCAACTCATCATAATCCA...GGAGTGCAGAAATTGGCTTGCTAAAAGTGCCTTTTGTGTGACAATAAGGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCCTTATTGTCACACAAAAGGCACTTTTAGCAAGCCAATTTCTGCACTCCGTCCAGGGTAAACACTaGCATGAGCTAAAGTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: SLLIVTQKALLASQFLHSVQGKH*HELKSY Trigger: ATAGGACTTTAGCTCATGCCAGTGTTTACCCTGGAC...GGAGTGCAGAAATTGGCTTGCTAAAAGTGCCTTTTGTGTGACAATAAGGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTGTCTGTGGAGAGAAGCAAGTAATTCCACTGGTTCTAGATAGATTAGCCTCAATTCTGTTCCATTaGTCTACCTGTCTGTCACTG | + |
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Preference number: 2 (lower is better) Translates to: QCVCGEKQVIPLVLDRLASILFH*STCLSL Trigger: CAGTGACAGACAGGTAGATCAATGGAACAGAATTGA...GGCTAATCTATCTAGAACCAGTGGAATTACTTGCTTCTCTCCACAGACACACTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTCCTTATTGTCACACAAAAGGCACTTTTAGCAAGCCAATTTCTGCACTCCGCATCTGCTGTCACCTaGATTTCTAATCTTAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: SLLIVTQKALLASQFLHSASAVT*ISNLSH Trigger: ATGGCTAAGATTAGAAATTCAGGTGACAGCAGATGC...GGAGTGCAGAAATTGGCTTGCTAAAAGTGCCTTTTGTGTGACAATAAGGAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR CAA 90 bp | GTGATGAAACACCTTCAGAACAGCTTAAATGTGGAAGGAGTTATATaGTCTCACTCTTCCAGACCTTCATGGTTGGAATATGTGGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: VMKHLQNSLNVEGVI*SHSSRPSWLEYVGC Trigger: ACACCCCACATATTCCAACCATGAAGGTCTGGAAGAGTGAGACAATATAACTCCTTCCACATTTAAGCTGTTCTGAAGGTGTTTCATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTACCATGCAGTTTTTATaGCAATTGCTCTGTGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LAILTGVRWNLRVVLICITMQFL*QLLCGQ Trigger: CTGACCACAGAGCAATTGTCATAAAAACTGCATGGT...AATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCTCCTTATTGTCACACAAAAGGCACTTTTAGCAAGCCAATTTCTGCACTCCAGTTTTTATGACAATTaGTCTGTGGTCAGCTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SLLIVTQKALLASQFLHSSFYDN*SVVSLR Trigger: CCTCAAGCTGACCACAGAGCAATTGTCATAAAAACT...GGAGTGCAGAAATTGGCTTGCTAAAAGTGCCTTTTGTGTGACAATAAGGAGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGTTATATTGTCTCACTCTTCCAGACCTTCATGGTTGGAATATGTGGGGTAGAAGGTTGCTTTCATaGTACAATCCTCTCCGTATC | + |
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Preference number: 2 (lower is better) Translates to: KELYCLTLPDLHGWNMWGRRLLS*YNPLRI Trigger: GATACGGAGAGGATTGTAGCATGAAAGCAACCTTCT...ACCCCACATATTCCAACCATGAAGGTCTGGAAGAGTGAGACAATATAACTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGTTATATTGTCTCACTCTTCCAGACCTTCATGGTTGGAATATGTGGGGTTCTACAAACTTCAGCTaGTGTGTTGTTCAGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: KELYCLTLPDLHGWNMWGSTNFS*CVVQQV Trigger: CACTTGCTGAACAACACAGCAGCTGAAGTTTGTAGA...ACCCCACATATTCCAACCATGAAGGTCTGGAAGAGTGAGACAATATAACTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGTTATATTGTCTCACTCTTCCAGACCTTCATGGTTGGAATATGTGGGGTCAAGGTAAAGTCTTGTaGTTACTGTGCTACTATGCT | + |
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Preference number: 2 (lower is better) Translates to: KELYCLTLPDLHGWNMWGQGKVL*LLCYYA Trigger: AGCATAGTAGCACAGTAATCACAAGACTTTACCTTG...ACCCCACATATTCCAACCATGAAGGTCTGGAAGAGTGAGACAATATAACTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTCTGTGGAGAGAAGCAAGTAATTCCACTGGTTCTAGATAGATTAGCCATATTGAGCCAACACTGTTaGTTGAAGATGCTGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: CVCGEKQVIPLVLDRLAILSQHC*LKMLSS Trigger: AGAAGACAGCATCTTCAACCAACAGTGTTGGCTCAA...TATGGCTAATCTATCTAGAACCAGTGGAATTACTTGCTTCTCTCCACAGACACA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTTAGCAAGCCAATTTCTGCACTCCAAAACCACATATCTCATCTGAATGTTGAGTCCCAAGAAGGTTaGTTTCATGCTACAATCCTC | + |
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Preference number: 2 (lower is better) Translates to: TFSKPISALQNHISHLNVESQEG*FHATIL Trigger: GAGGATTGTAGCATGAAAGCAACCTTCTTGGGACTC...AACATTCAGATGAGATATGTGGTTTTGGAGTGCAGAAATTGGCTTGCTAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR TCA 90 bp | TACGACAAGTCTCTGGTCATATGTAACACCCATAAACACAAACACCACAAAGACAGCTTTGCAATTTTATaGGGTTCCATTTGTCGATTC | + |
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Preference number: 2 (lower is better) Translates to: YDKSLVICNTHKHKHHKDSFAIL*GSICRF Trigger: GAATCGACAAATGGAACCTCATAAAATTGCAAAGCT...GTCTTTGTGGTGTTTGTGTTTATGGGTGTTACATATGACCAGAGACTTGTCGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTAAGAATGGATCAATTTaGATTCTCCTACATGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: LAILTGVRWNLRVVLICIKNGSI*ILLHAN Trigger: GTTAGCATGTAGGAGAATGCAAATTGATCCATTCTT...AATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR GCA 90 bp | TACGACAAGTCTCTGGTCATATGTAACACCCATAAACACAAACACCACAAAGACGCCTTACAGAAGCTTTaGAATTTTATGAGGTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: YDKSLVICNTHKHKHHKDALQKL*NFMRFH Trigger: ATGGAACCTCATAAAATTGCAAAGCTTCTGTAAGGC...GTCTTTGTGGTGTTTGTGTTTATGGGTGTTACATATGACCAGAGACTTGTCGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTTTAGCAAGCCAATTTCTGCACTCCAAAACCACATATCTCATCTGAATGTTGAAGTCAAGTTTCCATaGACACTCTTCGTGTGTATT | + |
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Preference number: 2 (lower is better) Translates to: TFSKPISALQNHISHLNVEVKFP*TLFVCI Trigger: AATACACACGAAGAGTGTTCATGGAAACTTGACTTC...AACATTCAGATGAGATATGTGGTTTTGGAGTGCAGAAATTGGCTTGCTAAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
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| 3UTR-3UTR CCA 90 bp | TACGACAAGTCTCTGGTCATATGTAACACCCATAAACACAAACACCACAAAGACAAGTTTCAGTGTCTCTaGTTTTATGTGAAGTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: YDKSLVICNTHKHKHHKDKFQCL*FYVKFL Trigger: AAGGAACTTCACATAAAACCAGAGACACTGAAACTT...GTCTTTGTGGTGTTTGTGTTTATGGGTGTTACATATGACCAGAGACTTGTCGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR TCA 72 bp | GAAATCAGGCTGAGAAAGCCATGTGGAACAAGCCAGTaGGCAGCACTCCTCCTTGGCTTCTGCATCAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: EIRLRKPCGTSQ*AALLLGFCISV Trigger: GACACTGATGCAGAAGCCAAGGAGGAGTGCTGCTCACTGGCTTGTTCCACATGGCTTTCTCAGCCTGATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR GCA 72 bp | AGCACTAGATGGCAGGCTAAGCCCAGGTTAGCCACATaGACACAACTGGTGTGTGTCAGTGTTTCAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: STRWQAKPRLAT*TQLVCVSVSEA Trigger: TGCCTCTGAAACACTGACACACACCAGTTGTGTGCATGTGGCTAACCTGGGCTTAGCCTGCCATCTAGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTGTTGTTCAGCAAGTGTGAGCAGAGTCCCAAGAAGGTTGCTTTCATGCTATGCTCTGTGGTCAGCTaGAGGTCAGGGATGGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: AVLFSKCEQSPKKVAFMLCSVVS*RSGMVI Trigger: AATCACCATCCCTGACCTCAAGCTGACCACAGAGCA...TAGCATGAAAGCAACCTTCTTGGGACTCTGCTCACACTTGCTGAACAACACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTCAGGAGTCTTTCCCCTGTGCCCATACTTCGAGGCTTTCCCCCACTTTCTAGCCAACACTGTTGGTaGAAGATGCTGTCTTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: WFRSLSPVPILRGFPPLSSQHCW*KMLSSF Trigger: GAAAGAAGACAGCATCTTCAACCAACAGTGTTGGCT...AGAAAGTGGGGGAAAGCCTCGAAGTATGGGCACAGGGGAAAGACTCCTGAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGGTGGGACCACCTCTGGGCTGATTGTCCTTGGTTGTATAAGAAATCAGGCACTGACCCTGATTCCTaGAGATCACTGGAAGTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: CWWDHLWADCPWLYKKSGTDPDS*RSLEVE Trigger: CTCGACTTCCAGTGATCTCAAGGAATCAGGGTCAGT...GCCTGATTTCTTATACAACCAAGGACAATCAGCCCAGAGGTGGTCCCACCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR TCA 72 bp | ACAACTGGTGTGTGTCAGTGTTTCAGAGGCAGAGGGTaGCACAAGGCCAGAGAGATCTACAAACTTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TTGVCQCFRGRG*HKAREIYKLQL Trigger: CAGCTGAAGTTTGTAGATCTCTCTGGCCTTGTGTCACCCTCTGCCTCTGAAACACTGACACACACCAGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR GCA 72 bp | GCAAGTGTGAGCAGAGTCCCAAGAAGGTTGCTTTCATaGTACAATCCTCTCCGTATCCCAGTAAGTGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ASVSRVPRRLLS*YNPLRIPVSAS Trigger: TGAGGCACTTACTGGGATACGGAGAGGATTGTAGCATGAAAGCAACCTTCTTGGGACTCTGCTCACACTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR TCA 72 bp | CCTGTCTGTCACTGTACCAGCACCATGCAGTTTTTATaGCAATTGCTCTGTGGTCAGCTTGAGGTCAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PVCHCTSTMQFL*QLLCGQLEVRD Trigger: ATCCCTGACCTCAAGCTGACCACAGAGCAATTGTCATAAAAACTGCATGGTGCTGGTACAGTGACAGACAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR TCA 72 bp | GGCAGTAGGTGGATCAGACTCTCAAGGACTGAACTTTaGACCTGGTTTGCAGAGCCTCCTTATTGTCACACA | + |
|
Preference number: 3 (lower is better) Translates to: GSRWIRLSRTEL*TWFAEPPYCHT Trigger: TGTGTGACAATAAGGAGGCTCTGCAAACCAGGTTCAAAGTTCAGTCCTTGAGAGTCTGATCCACCTACTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR TCA 72 bp | TGGGCTGATTGTCCTTGGTTGTATAAGAAATCAGGCTaGGAAAGCCATGTGGAACAAGCCAGTGAGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: WADCPWLYKKSG*ESHVEQASEQH Trigger: GTGCTGCTCACTGGCTTGTTCCACATGGCTTTCTCAGCCTGATTTCTTATACAACCAAGGACAATCAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CCA 72 bp | TGTCTCACTCTTCCAGACCTTCATGGTTGGAATATGTaGGGTGTGAATGAGGATGGCCCTCATAGGCACATA | + |
|
Preference number: 3 (lower is better) Translates to: CLTLPDLHGWNM*GVNEDGPHRHI Trigger: TATGTGCCTATGAGGGCCATCCTCATTCACACCCCACATATTCCAACCATGAAGGTCTGGAAGAGTGAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTCAGGAGTCTTTCCCCTGTGCCCATACTTCGAGGCTTTCCCCCACTTTCTTTGATCCATTTAGACTaGAGCTTTGTACATGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: WFRSLSPVPILRGFPPLSLIHLD*SFVHGD Trigger: ATCTCCATGTACAAAGCTCAAGTCTAAATGGATCAA...AGAAAGTGGGGGAAAGCCTCGAAGTATGGGCACAGGGGAAAGACTCCTGAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR TCA 72 bp | GTGTGCTGTCATGTCAGCGTATTGGATTACGTGGGATaGGTGATTGAAGAAAGCGAGACACTGCAGGATGTA | + |
|
Preference number: 3 (lower is better) Translates to: VCCHVSVLDYVG*VIEESETLQDV Trigger: TACATCCTGCAGTGTCTCGCTTTCTTCAATCACTCATCCCACGTAATCCAATACGCTGACATGACAGCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTCCTTATTGTCACACAAAAGGCACTTTTAGCAAGCCAATTTCTGCACTCCACAAGCCATTGTTGTTaGGTTCAGGAGTCTTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLLIVTQKALLASQFLHSTSHCC*VQESFP Trigger: GGGGAAAGACTCCTGAACCAAACAACAATGGCTTGT...GGAGTGCAGAAATTGGCTTGCTAAAAGTGCCTTTTGTGTGACAATAAGGAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR TCA 72 bp | TCTACAAACTTCAGCTGCTGTGTTGTTCAGCAAGTGTaGGCAGAGTCCCAAGAAGGTTGCTTTCATGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: STNFSCCVVQQV*AESQEGCFHAT Trigger: TGTAGCATGAAAGCAACCTTCTTGGGACTCTGCTCACACTTGCTGAACAACACAGCAGCTGAAGTTTGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR TCA 72 bp | TCTAAAGCTGGCCTGCTAGCTAGTTTTATGTCAACTTaGTACAAGGTAGAGTCATCTGAGAGGAGGGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: SKAGLLASFMST*YKVESSERRAP Trigger: AGGTGCCCTCCTCTCAGATGACTCTACCTTGTATCAAGTTGACATAAAACTAGCTAGCAGGCCAGCTTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR GCA 72 bp | CCATTGATCTACCTGTCTGTCACTGTACCAGCACCATaGAGTTTTTATGACAATTGCTCTGTGGTCAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PLIYLSVTVPAP*SFYDNCSVVSL Trigger: CAAGCTGACCACAGAGCAATTGTCATAAAAACTGCATGGTGCTGGTACAGTGACAGACAGGTAGATCAATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CCA 72 bp | CTCCTACATGCTAACTGCCTGTTGAGCCAACACTGTTaGTTGAAGATGCTGTCTTCTTTCCACTGGATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLHANCLLSQHC*LKMLSSFHWIV Trigger: AACTATCCAGTGGAAAGAAGACAGCATCTTCAACCAACAGTGTTGGCTCAACAGGCAGTTAGCATGTAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CCA 72 bp | TCGATTCTTGATCTTACAGCACAAGCCATTGTTGTTTaGTTCAGGAGTCTTTCCCCTGTGCCCATACTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: SILDLTAQAIVV*FRSLSPVPILR Trigger: TCGAAGTATGGGCACAGGGGAAAGACTCCTGAACCAAACAACAATGGCTTGTGCTGTAAGATCAAGAATCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTCCTTATTGTCACACAAAAGGCACTTTTAGCAAGCCAATTTCTGCACTCCTCAGGTGAGAATTCTTaGTTTAGCCCTGTACCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SLLIVTQKALLASQFLHSSGENS*FSPVPH Trigger: ATGGGGTACAGGGCTAAACAAAGAATTCTCACCTGA...GGAGTGCAGAAATTGGCTTGCTAAAAGTGCCTTTTGTGTGACAATAAGGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGGTGGGACCACCTCTGGGCTGATTGTCCTTGGTTGTATAAGAAATCAGGCAATCTCAGGGTTGTTTaGATTTGCATTTCCTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: CWWDHLWADCPWLYKKSGNLRVV*ICISLM Trigger: CATCAAGGAAATGCAAATCAAAACAACCCTGAGATT...GCCTGATTTCTTATACAACCAAGGACAATCAGCCCAGAGGTGGTCCCACCAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTTAGCAAGCCAATTTCTGCACTCCAAAACCACATATCTCATCTGAATGTTTCTCTCTCCACATCCTaGCCAGCATCTGCTGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: TFSKPISALQNHISHLNVSLSTS*PASAVT Trigger: GGTGACAGCAGATGCTGGCAAGGATGTGGAGAGAGA...AACATTCAGATGAGATATGTGGTTTTGGAGTGCAGAAATTGGCTTGCTAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR TCA 72 bp | CCCTTGAGTCCGTCATTAGGAGAAGTCAAGTTTCCATaGACACTCTTCGTGTGTATTGCTGGGCAACATTAT | + |
|
Preference number: 3 (lower is better) Translates to: PLSPSLGEVKFP*TLFVCIAGQHY Trigger: ATAATGTTGCCCAGCAATACACACGAAGAGTGTTCATGGAAACTTGACTTCTCCTAATGACGGACTCAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR GCA 72 bp | CCTAAGCAATTCTCAGCCATAGGAGACATCCTGGTTTaGAACCCAGCCCTTCTGTTTGACTTTTGTACTATT | + |
|
Preference number: 3 (lower is better) Translates to: PKQFSAIGDILV*NPALLFDFCTI Trigger: AATAGTACAAAAGTCAAACAGAAGGGCTGGGTTGCAAACCAGGATGTCTCCTATGGCTGAGAATTGCTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR TCA 72 bp | TCATGTCAGCGTATTGGATTACGTGGGATGAGTGATTaGAGAAAGCGAGACACTGCAGGATGTATTTACTAC | + |
|
Preference number: 3 (lower is better) Translates to: SCQRIGLRGMSD*RKRDTAGCIYY Trigger: GTAGTAAATACATCCTGCAGTGTCTCGCTTTCTTCAATCACTCATCCCACGTAATCCAATACGCTGACATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CCA 72 bp | GAGGGCACCTTGGTTGAGAAAATGCCTCCTTATCACTaGGTTATAGGCAAGTCTGTAGAGCATTTTATTAGT | + |
|
Preference number: 3 (lower is better) Translates to: EGTLVEKMPPYH*VIGKSVEHFIS Trigger: ACTAATAAAATGCTCTACAGACTTGCCTATAACCCAGTGATAAGGAGGCATTTTCTCAACCAAGGTGCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTTAGCAAGCCAATTTCTGCACTCCAAAACCACATATCTCATCTGAATGTTTTACAGCACAAGCCATaGTTGTTTGGTTCAGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: TFSKPISALQNHISHLNVLQHKP*LFGSGV Trigger: GACTCCTGAACCAAACAACAATGGCTTGTGCTGTAA...AACATTCAGATGAGATATGTGGTTTTGGAGTGCAGAAATTGGCTTGCTAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTTAGCAAGCCAATTTCTGCACTCCAAAACCACATATCTCATCTGAATGTTCTAGACACTGAAGCCTaGGATTATGATGAGTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TFSKPISALQNHISHLNVLDTEA*DYDELG Trigger: ACCCAACTCATCATAATCCAAGGCTTCAGTGTCTAG...AACATTCAGATGAGATATGTGGTTTTGGAGTGCAGAAATTGGCTTGCTAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR GCA 72 bp | TTGAGCTTTGTACATGGAGATAAGAATGGATCAATTTaGATTCTCCTACATGCTAACTGCCTGTTGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LSFVHGDKNGSI*ILLHANCLLSQ Trigger: TTGGCTCAACAGGCAGTTAGCATGTAGGAGAATGCAAATTGATCCATTCTTATCTCCATGTACAAAGCTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CCA 72 bp | GAATTTCTAATCTTAGCCATTCTGACTGGTGTGAGGTaGAATCTCAGGGTTGTTTTGATTTGCATTTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: EFLILAILTGVR*NLRVVLICISL Trigger: CAAGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATTAGAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR TCA 72 bp | GCTTTGCAATTTTATGAGGTTCCATTTGTCGATTCTTaGTCTTACAGCACAAGCCATTGTTGTTTGGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALQFYEVPFVDS*SYSTSHCCLVQ Trigger: CTGAACCAAACAACAATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGAACCTCATAAAATTGCAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CCA 72 bp | GTTCTAGATAGATTAGCCATAAGTACGACAAGTCTCTaGTCATATGTAACACCCATAAACACAAACACCACA | + |
|
Preference number: 3 (lower is better) Translates to: VLDRLAISTTSL*SYVTPINTNTT Trigger: TGTGGTGTTTGTGTTTATGGGTGTTACATATGACCAGAGACTTGTCGTACTTATGGCTAATCTATCTAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR TCA 72 bp | GAGAGAAAGTATATGGATGGGTATGTATTACACAGTTaGGATAGACTTTTCATCACAGTGATGAAACACCTT | + |
|
Preference number: 3 (lower is better) Translates to: ERKYMDGYVLHS*DRLFITVMKHL Trigger: AAGGTGTTTCATCACTGTGATGAAAAGTCTATCTCAACTGTGTAATACATACCCATCCATATACTTTCTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTCAGGAGTCTTTCCCCTGTGCCCATACTTCGAGGCTTTCCCCCACTTTCTTACCTGTGGACAGGTTaGAGGTATGTGGAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WFRSLSPVPILRGFPPLSYLWTG*RYVEMA Trigger: AGCCATCTCCACATACCTCCAACCTGTCCACAGGTA...AGAAAGTGGGGGAAAGCCTCGAAGTATGGGCACAGGGGAAAGACTCCTGAACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTCAGGAGTCTTTCCCCTGTGCCCATACTTCGAGGCTTTCCCCCACTTTCTGTATGTGGAGATGGCTaGGCCATAAAACATGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WFRSLSPVPILRGFPPLSVCGDG*AIKHGN Trigger: GTTGCCATGTTTTATGGCTCAGCCATCTCCACATAC...AGAAAGTGGGGGAAAGCCTCGAAGTATGGGCACAGGGGAAAGACTCCTGAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CAA 72 bp | CACTCCTCCTTGGCTTCTGCATCAGTGTCTGCCTCCTaGTTCCCACACAGTTTGAGTTCCTGCTTCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSSLASASVSAS*FPHSLSSCFLQ Trigger: TTGAAGGAAGCAGGAACTCAAACTGTGTGGGAACAAGGAGGCAGACACTGATGCAGAAGCCAAGGAGGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CAA 72 bp | TATGCTCTAGACACTGAAGCCTTGGATTATGATGAGTaGGGTGTTCCTCTCTCTCCACATCCTTGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YALDTEALDYDE*GVPLSPHPCQH Trigger: ATGCTGGCAAGGATGTGGAGAGAGAGGAACACCCAACTCATCATAATCCAAGGCTTCAGTGTCTAGAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CAA 72 bp | GGATCAGACTCTCAAGGACTGAACTTTGAACCTGGTTaGCAGAGCCTCCTTATTGTCACACAAAAGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GSDSQGLNFEPG*QSLLIVTQKAL Trigger: AAGTGCCTTTTGTGTGACAATAAGGAGGCTCTGCAAACCAGGTTCAAAGTTCAGTCCTTGAGAGTCTGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTGTTGTTCAGCAAGTGTGAGCAGAGTCCCAAGAAGGTTGCTTTCATGCTAAATGAAGCCCTCTTCTaGACTGGTGTTCAAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: AVLFSKCEQSPKKVAFMLNEALF*TGVQIF Trigger: GAATATTTGAACACCAGTTCAGAAGAGGGCTTCATT...TAGCATGAAAGCAACCTTCTTGGGACTCTGCTCACACTTGCTGAACAACACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTCAGGTTGGAGGTATGTaGAGATGGCTGAGCCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAILTGVRWNLRVVLICIQVGGM*RWLSHK Trigger: TTTATGGCTCAGCCATCTCCACATACCTCCAACCTG...AATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CAA 72 bp | ATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGTaGTTTGGTTCAGGAGTCTTTCCCCTGTGCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: ICRFLILQHKPL*FGSGVFPLCPY Trigger: GTATGGGCACAGGGGAAAGACTCCTGAACCAAACAACAATGGCTTGTGCTGTAAGATCAAGAATCGACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CAA 72 bp | CTGCACATATCACCCCAGGCAATGTACACAATAACGTaGAGTATTCATCCCCGATATCATGCTGGTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LHISPQAMYTIT*SIHPRYHAGFT Trigger: TGTGAAACCAGCATGATATCGGGGATGAATACTCAACGTTATTGTGTACATTGCCTGGGGTGATATGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| CDS-3UTR GCA 90 bp | AAGGAGTTATATTGTCTCACTCTTCCAGACCTTCATGGTTGGAATATGTGGGGTCACAATGAGATGAGATaGACACGTCCCAAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KELYCLTLPDLHGWNMWGHNEMR*TRPKSL Trigger: AAGGCTTTTGGGACGTGTGCATCTCATCTCATTGTG...ACCCCACATATTCCAACCATGAAGGTCTGGAAGAGTGAGACAATATAACTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CAA 72 bp | CCATGCAGTTTTTATGACAATTGCTCTGTGGTCAGCTaGAGGTCAGGGATGGTGATTCCACAATGTAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: PCSFYDNCSVVS*RSGMVIPQCNE Trigger: TTCATTACATTGTGGAATCACCATCCCTGACCTCAAGCTGACCACAGAGCAATTGTCATAAAAACTGCATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CAA 72 bp | ACCCTTTCCTCTCCAAGGTGCTTTTGGTCATATTGTTaGATCACAGTGCTAGAAACCCTAACTAAGATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TLSSPRCFWSYC*ITVLETLTKML Trigger: TAGCATCTTAGTTAGGGTTTCTAGCACTGTGATCAAACAATATGACCAAAAGCACCTTGGAGAGGAAAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CAA 72 bp | TTCTCAGTCATTTGGTATTCCTCAGGTGAGAATTCTTaGTTTAGCCCTGTACCCCATTTTATAACAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVIWYSSGENS*FSPVPHFITGL Trigger: CAACCCTGTTATAAAATGGGGTACAGGGCTAAACAAAGAATTCTCACCTGAGGAATACCAAATGACTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CAA 72 bp | GCCTTACAGAAGCTTTGCAATTTTATGAGGTTCCATTaGTCGATTCTTGATCTTACAGCACAAGCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALQKLCNFMRFH*SILDLTAQAIV Trigger: AACAATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGAACCTCATAAAATTGCAAAGCTTCTGTAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CAA 72 bp | TATATATTGGATATAACCCTCCCATCAGATTTAGGATaGGTAAAGAGCTTTTTCCAATCTGTTGGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YILDITLPSDLG*VKSFFQSVGCL Trigger: AAGGCAACCAACAGATTGGAAAAAGCTCTTTACCAATCCTAAATCTGATGGGAGGGTTATATCCAATATATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| 3UTR CAA 72 bp | ATAACAGGGTTGTTTGGTTTTCTAGAGTCCAACTTCTaGAGTTCTTTATATATATTGGATATAACCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITGLFGFLESNF*SSLYILDITLP Trigger: TGGGAGGGTTATATCCAATATATATAAAGAACTCAAGAAGTTGGACTCTAGAAAACCAAACAACCCTGTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213256.2 |
||
| CDS TCA 90 bp | ATCTATAGCCATTGTCACCAAAAGCACACACTCAGTTCCTCCCAGTaGGAGCACTATGCAGAGCTGGGCCACACACCTTCCAAAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: IYSHCHQKHTLSSSQ*EHYAELGHTPSKAD Trigger: ATCAGCTTTGGAAGGTGTGTGGCCCAGCTCTGCATAGTGCTCTCACTGGGAGGAACTGAGTGTGTGCTTTTGGTGACAATGGCTATAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167248.3 ENSMUST00000213256.2 |
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| CDS TCA 72 bp | ATACCTGTGGACAGGTTGGAGGTATGTGGAGATGGCTaGGCCATAAAACATGGCAACCACAATGAGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: IPVDRLEVCGDG*AIKHGNHNEMR Trigger: TCTCATCTCATTGTGGTTGCCATGTTTTATGGCTCAGCCATCTCCACATACCTCCAACCTGTCCACAGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167248.3 ENSMUST00000213256.2 |
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