Pregenerated sensors for OLFR1378 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050343Ensembl transcript IDs: ENSMUST00000052285.2, ENSMUST00000213259.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTGGAGCCTTAAAGCTCGGACTGGTATTGAACTTGCATCTTTCTaGCTCAGTGCCTTATGTGTTGGAGTCACGTGCCTGGCCTACCAC | + |
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Preference number: 1 (lower is better) Translates to: NWSLKARTGIELASF*LSALCVGVTCLAYH Trigger: GTGGTAGGCCAGGCACGTGACTCCAACACATAAGGCACTGAGGCAGAAAGATGCAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR GCA 90 bp | TGGCCTACCACACCTGGGTCTTCCCATGATTTGTGTTGTATGAATTaGAGAGGGAAATGTGAGAGGTCAGCCTTGACCTTGGCACTCATG | + |
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Preference number: 1 (lower is better) Translates to: WPTTPGSSHDLCCMN*RGKCERSALTLALM Trigger: CATGAGTGCCAAGGTCAAGGCTGACCTCTCACATTTCCCTCTGCAATTCATACAACACAAATCATGGGAAGACCCAGGTGTGGTAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR GCA 90 bp | AGTCTCTGCACCCTATGTGAGAGGCAAGGTAGTTACATATATCCTTaGCTCAGGGATTTGCCAGCCAAACAAAGCATTGAGCCCAGATTT | + |
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Preference number: 1 (lower is better) Translates to: SLCTLCERQGSYIYP*LRDLPAKQSIEPRF Trigger: AAATCTGGGCTCAATGCTTTGTTTGGCTGGCAAATCCCTGAGGCAAGGATATATGTAACTACCTTGCCTCTCACATAGGGTGCAGAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR TCA 90 bp | ATCGGGGTGAATGCCACAAAACCTGTGATCACAATGGATACACATTaGAGTCACACTCTGTGCCTGGCACGCTGCACAGAAATATACAAA | + |
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Preference number: 1 (lower is better) Translates to: IGVNATKPVITMDTH*SHTLCLARCTEIYK Trigger: TTTGTATATTTCTGTGCAGCGTGCCAGGCACAGAGTGTGACTTCAATGTGTATCCATTGTGATCACAGGTTTTGTGGCATTCACCCCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CCA 90 bp | GGCTTGTTATGCCATTCACCAAAGAATCAGAAAAGGAGACAGAACTaGTCCCTAACAGCACACCGTTCAATAGTTGAGGATCGTGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: GLLCHSPKNQKRRQN*SLTAHRSIVEDRAE Trigger: TTCTGCACGATCCTCAACTATTGAACGGTGTGCTGTTAGGGACCAGTTCTGTCTCCTTTTCTGATTCTTTGGTGAATGGCATAACAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR TCA 90 bp | GAAGTGATGCTGGGTTTGGTCATTGTTGAGCAGGATATGGAGTTCTaGAATAGTGTGAGATTTCTGCTTTACCATTTGTGTGAGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: EVMLGLVIVEQDMEF*NSVRFLLYHLCEAG Trigger: TCCTGCCTCACACAAATGGTAAAGCAGAAATCTCACACTATTTCAGAACTCCATATCCTGCTCAACAATGACCAAACCCAGCATCACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR TCA 90 bp | GATTTCTGCTTTACCATTTGTGTGAGGCAGGAGATTGACCCTCAGTaGTTTCCAACCCACAATTTTGTGCCTGGATCTAATTTTAAACTT | + |
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Preference number: 1 (lower is better) Translates to: DFCFTICVRQEIDPQ*FPTHNFVPGSNFKL Trigger: AAGTTTAAAATTAGATCCAGGCACAAAATTGTGGGTTGGAAATCACTGAGGGTCAATCTCCTGCCTCACACAAATGGTAAAGCAGAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CCA 90 bp | GTGCAGAAACGACCACTGTATATGCTTTCACCCCAAGCTGGTGTCTaGGATAAAATTCAACACTTTCATCTTTCTAATTCCTTCATTCTT | + |
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Preference number: 1 (lower is better) Translates to: VQKRPLYMLSPQAGV*DKIQHFHLSNSFIL Trigger: AAGAATGAAGGAATTAGAAAGATGAAAGTGTTGAATTTTATCCCAGACACCAGCTTGGGGTGAAAGCATATACAGTGGTCGTTTCTGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR GCA 90 bp | AATATTGTCATATATGTTATTCAACAGTATGCAGGAAAGATCACTTaGAAGCTTCCTTATTGCATGGGACCCTTGGATGGAATATACAGT | + |
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Preference number: 1 (lower is better) Translates to: NIVIYVIQQYAGKIT*KLPYCMGPLDGIYS Trigger: ACTGTATATTCCATCCAAGGGTCCCATGCAATAAGGAAGCTTGCAAGTGATCTTTCCTGCATACTGTTGAATAACATATATGACAATATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGAGAGTGTGGGTCCCCCTGGGCATCTCCCCACCTTGGCACATCAAGCTTCACATCCTCTCCCACTaGGGCCAAACAAGGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PLRVWVPLGISPPWHIKLHILSH*GQTRQP Trigger: GGGCTGCCTTGTTTGGCCTCAGTGGGAGAGGATGTG...AAGCTTGATGTGCCAAGGTGGGGAGATGCCCAGGGGGACCCACACTCTCAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGAGAGTGTGGGTCCCCCTGGGCATCTCCCCACCTTGGCACATCAAGCTTTGCAAGCTTCCTTATTaGATGGGACCCTTGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: PLRVWVPLGISPPWHIKLCKLPY*MGPLDG Trigger: TCCATCCAAGGGTCCCATGCAATAAGGAAGCTTGCA...AAGCTTGATGTGCCAAGGTGGGGAGATGCCCAGGGGGACCCACACTCTCAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGAGAGTGTGGGTCCCCCTGGGCATCTCCCCACCTTGGCACATCAAGCTTATACATCGGGGTGAATaGCACAAAACCTGTGATCAC | + |
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Preference number: 2 (lower is better) Translates to: PLRVWVPLGISPPWHIKLIHRGE*HKTCDH Trigger: GTGATCACAGGTTTTGTGGCATTCACCCCGATGTAT...AAGCTTGATGTGCCAAGGTGGGGAGATGCCCAGGGGGACCCACACTCTCAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CAA 90 bp | GGACTGGTATTGAACTTGCATCTTTCTGCCTCAGTGCCTTATGTGTaGGAGTCACGTGCCTGGCCTACCACACCTGGGTCTTCCCATGAT | + |
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Preference number: 2 (lower is better) Translates to: GLVLNLHLSASVPYV*ESRAWPTTPGSSHD Trigger: ATCATGGGAAGACCCAGGTGTGGTAGGCCAGGCACGTGACTCCAACACATAAGGCACTGAGGCAGAAAGATGCAAGTTCAATACCAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGAGAGTGTGGGTCCCCCTGGGCATCTCCCCACCTTGGCACATCAAGCTTGTTTTTCAATTTCCTTaGGCTTGTAGACAGGAAACG | + |
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Preference number: 2 (lower is better) Translates to: PLRVWVPLGISPPWHIKLVFQFP*ACRQET Trigger: CGTTTCCTGTCTACAAGCTCAAGGAAATTGAAAAAC...AAGCTTGATGTGCCAAGGTGGGGAGATGCCCAGGGGGACCCACACTCTCAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGAGAGTGTGGGTCCCCCTGGGCATCTCCCCACCTTGGCACATCAAGCTTCAGGATATGGAGTTCTaGAATAGTGTGAGATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PLRVWVPLGISPPWHIKLQDMEF*NSVRFL Trigger: CAGAAATCTCACACTATTTCAGAACTCCATATCCTG...AAGCTTGATGTGCCAAGGTGGGGAGATGCCCAGGGGGACCCACACTCTCAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGAGTGTGGGTCCCCCTGGGCATCTCCCCACCTTGGCACATCAAGCTTCTCCCCAAGCTGGTGTCTaGGATAAAATTCAACACTTT | + |
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Preference number: 2 (lower is better) Translates to: SESVGPPGHLPTLAHQASPQAGV*DKIQHF Trigger: AAAGTGTTGAATTTTATCCCAGACACCAGCTTGGGG...AGAAGCTTGATGTGCCAAGGTGGGGAGATGCCCAGGGGGACCCACACTCTCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTCTTTCCCTCCCAGTACTGAAGGTAAAAACTGGAGCCTTAAAGCTCGGATTGGAGTCACGTGCCTaGCCTACCACACCTGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: QLLSLPVLKVKTGALKLGLESRA*PTTPGS Trigger: AGACCCAGGTGTGGTAGGCCAGGCACGTGACTCCAA...TCCGAGCTTTAAGGCTCCAGTTTTTACCTTCAGTACTGGGAGGGAAAGAAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CAA 90 bp | TTGGAGTCACGTGCCTGGCCTACCACACCTGGGTCTTCCCATGATTaGTGTTGTATGAATTGCAGAGGGAAATGTGAGAGGTCAGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LESRAWPTTPGSSHD*CCMNCRGKCERSAL Trigger: CAAGGCTGACCTCTCACATTTCCCTCTGCAATTCATACAACACAAATCATGGGAAGACCCAGGTGTGGTAGGCCAGGCACGTGACTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CAA 90 bp | TGTTGTATGAATTGCAGAGGGAAATGTGAGAGGTCAGCCTTGACCTaGGCACTCATGAGCTGGCGTAAAACTTGTTCCATGGGAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: CCMNCRGKCERSALT*ALMSWRKTCSMGAP Trigger: TGGAGCTCCCATGGAACAAGTTTTACGCCAGCTCATGAGTGCCAAGGTCAAGGCTGACCTCTCACATTTCCCTCTGCAATTCATACAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGAGTGTGGGTCCCCCTGGGCATCTCCCCACCTTGGCACATCAAGCTTCTTGTTATTCAACAGTATaGAGGAAAGATCACTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: SESVGPPGHLPTLAHQASCYSTV*RKDHLQ Trigger: TTGCAAGTGATCTTTCCTGCATACTGTTGAATAACA...AGAAGCTTGATGTGCCAAGGTGGGGAGATGCCCAGGGGGACCCACACTCTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGTAATGAATGCTATTCAGGGAGGGGAGTCTCTGCACCCTATGTGAGAGGCTCCATGCTGACACCCTaGATGTTGATGGATACATCG | + |
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Preference number: 2 (lower is better) Translates to: SCNECYSGRGVSAPYVRGSMLTP*MLMDTS Trigger: CGATGTATCCATCAACATGCAGGGTGTCAGCATGGA...GCCTCTCACATAGGGTGCAGAGACTCCCCTCCCTGAATAGCATTCATTACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGTAATGAATGCTATTCAGGGAGGGGAGTCTCTGCACCCTATGTGAGAGGCCTCTACCTCCATGACTaGCTTGTTATGCCATTCACC | + |
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Preference number: 2 (lower is better) Translates to: SCNECYSGRGVSAPYVRGLYLHD*LVMPFT Trigger: GGTGAATGGCATAACAAGCCAGTCATGGAGGTAGAG...GCCTCTCACATAGGGTGCAGAGACTCCCCTCCCTGAATAGCATTCATTACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTCTTTCCCTCCCAGTACTGAAGGTAAAAACTGGAGCCTTAAAGCTCGGACTCCAAATGGTGATCTaGCAGCAGAAACAAAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: QLLSLPVLKVKTGALKLGLQMVI*QQKQKP Trigger: GGGCTTTTGTTTCTGCTGCCAGATCACCATTTGGAG...TCCGAGCTTTAAGGCTCCAGTTTTTACCTTCAGTACTGGGAGGGAAAGAAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CAA 90 bp | GATTTGTGTTGTATGAATTGCAGAGGGAAATGTGAGAGGTCAGCCTaGACCTTGGCACTCATGAGCTGGCGTAAAACTTGTTCCATGGGA | + |
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Preference number: 2 (lower is better) Translates to: DLCCMNCRGKCERSA*TLALMSWRKTCSMG Trigger: TCCCATGGAACAAGTTTTACGCCAGCTCATGAGTGCCAAGGTCAAGGCTGACCTCTCACATTTCCCTCTGCAATTCATACAACACAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGATTTGCCAGCCAAACAAAGCATTGAGCCCAGATTTTGGTAGAACAGCAATGTGGGCTGAGCAATaGAGAAAGGTGGGTAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: SGICQPNKALSPDFGRTAMWAEQ*RKVGSS Trigger: TGAACTACCCACCTTTCTCCATTGCTCAGCCCACAT...TGCTGTTCTACCAAAATCTGGGCTCAATGCTTTGTTTGGCTGGCAAATCCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGTAATGAATGCTATTCAGGGAGGGGAGTCTCTGCACCCTATGTGAGAGGCATGACTGGCTTGTTATaGCATTCACCAAAGAATCAG | + |
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Preference number: 2 (lower is better) Translates to: SCNECYSGRGVSAPYVRGMTGLL*HSPKNQ Trigger: CTGATTCTTTGGTGAATGGCATAACAAGCCAGTCAT...GCCTCTCACATAGGGTGCAGAGACTCCCCTCCCTGAATAGCATTCATTACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTACTGAAGGTAAAAACTGGAGCCTTAAAGCTCGGACTGGTATTGAACTTGGAAAGCAGGAGCAGGTaGATATCTTGGAGTTCGAGA | + |
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Preference number: 2 (lower is better) Translates to: PVLKVKTGALKLGLVLNLESRSR*ISWSSR Trigger: TCTCGAACTCCAAGATATCCACCTGCTCCTGCTTTC...CAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGTTTTTACCTTCAGTACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTCTTTCCCTCCCAGTACTGAAGGTAAAAACTGGAGCCTTAAAGCTCGGAAACAAAAGCCCCTCTTaGTGGAAGCTACTGATAAGT | + |
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Preference number: 2 (lower is better) Translates to: QLLSLPVLKVKTGALKLGNKSPS*WKLLIS Trigger: ACTTATCAGTAGCTTCCACCAAGAGGGGCTTTTGTT...TCCGAGCTTTAAGGCTCCAGTTTTTACCTTCAGTACTGGGAGGGAAAGAAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTGTAATGAATGCTATTCAGGGAGGGGAGTCTCTGCACCCTATGTGAGAGGCATGATTTGTGTTGTATaGATTGCAGAGGGAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: SCNECYSGRGVSAPYVRGMICVV*IAEGNV Trigger: CACATTTCCCTCTGCAATTCATACAACACAAATCAT...GCCTCTCACATAGGGTGCAGAGACTCCCCTCCCTGAATAGCATTCATTACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGGAGCCTTAAAGCTCGGACTGGTATTGAACTTGCATCTTTCTGCCTCAGTGTATATAGTGAGACCCTaGCTCAAAACAAACTTGACG | + |
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Preference number: 2 (lower is better) Translates to: TGALKLGLVLNLHLSASVYIVRP*LKTNLT Trigger: CGTCAAGTTTGTTTTGAGGCAGGGTCTCACTATATA...CACTGAGGCAGAAAGATGCAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CAA 90 bp | AATGTTCCTGGGACATATTTTCAGACCTCTACCTCCATGACTGGCTaGTTATGCCATTCACCAAAGAATCAGAAAAGGAGACAGAACTGG | + |
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Preference number: 2 (lower is better) Translates to: NVPGTYFQTSTSMTG*LCHSPKNQKRRQNW Trigger: CCAGTTCTGTCTCCTTTTCTGATTCTTTGGTGAATGGCATAACAAGCCAGTCATGGAGGTAGAGGTCTGAAAATATGTCCCAGGAACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CAA 90 bp | ATATTTCTTCCAGTCATGGTGGCACATACCTTTAAATCCCAGTACTaGGGAGGCAAAAGCAAAAAGAGTTCTGTGAGTTCCAGGCTAGTC | + |
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Preference number: 2 (lower is better) Translates to: IFLPVMVAHTFKSQY*GGKSKKSSVSSRLV Trigger: GACTAGCCTGGAACTCACAGAACTCTTTTTGCTTTTGCCTCCCAAGTACTGGGATTTAAAGGTATGTGCCACCATGACTGGAAGAAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CAA 90 bp | TATGCAGGAAAGATCACTTGCAAGCTTCCTTATTGCATGGGACCCTaGGATGGAATATACAGTCTCAAGTTCTTGCATCTACTAGCATCT | + |
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Preference number: 2 (lower is better) Translates to: YAGKITCKLPYCMGP*DGIYSLKFLHLLAS Trigger: AGATGCTAGTAGATGCAAGAACTTGAGACTGTATATTCCATCCAAGGGTCCCATGCAATAAGGAAGCTTGCAAGTGATCTTTCCTGCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGTACTGAAGGTAAAAACTGGAGCCTTAAAGCTCGGACTGGTATTGAACTTGATGCCACAAAACCTGTaGTCACAATGGATACACATT | + |
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Preference number: 2 (lower is better) Translates to: PVLKVKTGALKLGLVLNLMPQNL*SQWIHI Trigger: AATGTGTATCCATTGTGATCACAGGTTTTGTGGCAT...CAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGTTTTTACCTTCAGTACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CAA 90 bp | CTAAGGGTCATTAGTGATTCTAGAGACCTGAACAGGTCAATTTCTTaGTTTTTCAATTTCCTTGAGCTTGTAGACAGGAAACGTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LRVISDSRDLNRSIS*FFNFLELVDRKRVQ Trigger: CTGCACACGTTTCCTGTCTACAAGCTCAAGGAAATTGAAAAACAAAGAAATTGACCTGTTCAGGTCTCTAGAATCACTAATGACCCTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CAA 90 bp | GAATATTGTCATATATGTTATTCAACAGTATGCAGGAAAGATCACTaGCAAGCTTCCTTATTGCATGGGACCCTTGGATGGAATATACAG | + |
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Preference number: 2 (lower is better) Translates to: EYCHICYSTVCRKDH*QASLLHGTLGWNIQ Trigger: CTGTATATTCCATCCAAGGGTCCCATGCAATAAGGAAGCTTGCAAGTGATCTTTCCTGCATACTGTTGAATAACATATATGACAATATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CCA 72 bp | TCTGCCTCAGTGCCTTATGTGTTGGAGTCACGTGCCTaGCCTACCACACCTGGGTCTTCCCATGATTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: SASVPYVLESRA*PTTPGSSHDLC Trigger: ACACAAATCATGGGAAGACCCAGGTGTGGTAGGCCAGGCACGTGACTCCAACACATAAGGCACTGAGGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGAGAGTGTGGGTCCCCCTGGGCATCTCCCCACCTTGGCACATCAAGCTTCTGGGTCTTCCCATGATTaGTGTTGTATGAATTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: SESVGPPGHLPTLAHQASGSSHD*CCMNCR Trigger: TCTGCAATTCATACAACACAAATCATGGGAAGACCC...AGAAGCTTGATGTGCCAAGGTGGGGAGATGCCCAGGGGGACCCACACTCTCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGTACTGAAGGTAAAAACTGGAGCCTTAAAGCTCGGACTGGTATTGAACTTGGAGCAGGTGGATATCTaGGAGTTCGAGACCAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PVLKVKTGALKLGLVLNLEQVDI*EFETSL Trigger: GAGGCTGGTCTCGAACTCCAAGATATCCACCTGCTC...CAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGTTTTTACCTTCAGTACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCAACTCCAAATGGTGATCTGGCAGCAGAAACAAAAGCCCCTCTTGGTGGAAACCTCCATGACTGGCTaGTTATGCCATTCACCAAAG | + |
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Preference number: 3 (lower is better) Translates to: SQLQMVIWQQKQKPLLVETSMTG*LCHSPK Trigger: CTTTGGTGAATGGCATAACAAGCCAGTCATGGAGGT...TTCCACCAAGAGGGGCTTTTGTTTCTGCTGCCAGATCACCATTTGGAGTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR GCA 72 bp | CTTAAAGCTCGGACTGGTATTGAACTTGCATCTTTCTaGCTCAGTGCCTTATGTGTTGGAGTCACGTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: LKARTGIELASF*LSALCVGVTCL Trigger: CAGGCACGTGACTCCAACACATAAGGCACTGAGGCAGAAAGATGCAAGTTCAATACCAGTCCGAGCTTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR CAA 90 bp | CATGGGAGCTCCATGTGTCTCTTAAAGAGCCAACTCCAAATGGTGATCTGGCAGGACTCAGTTGCTTCATaGTCAGTCTTCTCTGTCCTA | + |
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Preference number: 3 (lower is better) Translates to: HGSSMCLLKSQLQMVIWQDSVAS*SVFSVL Trigger: TAGGACAGAGAAGACTGACAATGAAGCAACTGAGTC...CTGCCAGATCACCATTTGGAGTTGGCTCTTTAAGAGACACATGGAGCTCCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTGTAATGAATGCTATTCAGGGAGGGGAGTCTCTGCACCCTATGTGAGAGGCTATTGCATGGGACCCTaGGATGGAATATACAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: SCNECYSGRGVSAPYVRGYCMGP*DGIYSL Trigger: GAGACTGTATATTCCATCCAAGGGTCCCATGCAATA...GCCTCTCACATAGGGTGCAGAGACTCCCCTCCCTGAATAGCATTCATTACAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR TCA 72 bp | AATGCCACAAAACCTGTGATCACAATGGATACACATTaGAGTCACACTCTGTGCCTGGCACGCTGCACAGAA | + |
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Preference number: 3 (lower is better) Translates to: NATKPVITMDTH*SHTLCLARCTE Trigger: TTCTGTGCAGCGTGCCAGGCACAGAGTGTGACTTCAATGTGTATCCATTGTGATCACAGGTTTTGTGGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR GCA 72 bp | ACACCTGGGTCTTCCCATGATTTGTGTTGTATGAATTaGAGAGGGAAATGTGAGAGGTCAGCCTTGACCTTG | + |
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Preference number: 3 (lower is better) Translates to: TPGSSHDLCCMN*RGKCERSALTL Trigger: CAAGGTCAAGGCTGACCTCTCACATTTCCCTCTGCAATTCATACAACACAAATCATGGGAAGACCCAGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CCA 72 bp | ATGTGTCTCTTAAAGAGCCAACTCCAAATGGTGATCTaGCAGCAGAAACAAAAGCCCCTCTTGGTGGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: MCLLKSQLQMVI*QQKQKPLLVEA Trigger: AGCTTCCACCAAGAGGGGCTTTTGTTTCTGCTGCCAGATCACCATTTGGAGTTGGCTCTTTAAGAGACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
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| 3UTR CCA 72 bp | CCTACAAACACATGTGGGCTGAGCAATGGAGAAAGGTaGGTAGTTCATGCCTACCAACCTCTTACCAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PTNTCGLSNGER*VVHAYQPLTKE Trigger: TTCTTTGGTAAGAGGTTGGTAGGCATGAACTACCCACCTTTCTCCATTGCTCAGCCCACATGTGTTTGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGAGCCTTAAAGCTCGGACTGGTATTGAACTTGCATCTTTCTGCCTCAGTGTGCAGGAAAGATCACTaGCAAGCTTCCTTATTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TGALKLGLVLNLHLSASVCRKDH*QASLLH Trigger: ATGCAATAAGGAAGCTTGCAAGTGATCTTTCCTGCA...CACTGAGGCAGAAAGATGCAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR GCA 72 bp | ACCCTATGTGAGAGGCAAGGTAGTTACATATATCCTTaGCTCAGGGATTTGCCAGCCAAACAAAGCATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TLCERQGSYIYP*LRDLPAKQSIE Trigger: CTCAATGCTTTGTTTGGCTGGCAAATCCCTGAGGCAAGGATATATGTAACTACCTTGCCTCTCACATAGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CCA 72 bp | CACCTTAAGTTCTACTACTCAGAAAGCAGGAGCAGGTaGATATCTTGGAGTTCGAGACCAGCCTCATTTACA | + |
|
Preference number: 3 (lower is better) Translates to: HLKFYYSESRSR*ISWSSRPASFT Trigger: TGTAAATGAGGCTGGTCTCGAACTCCAAGATATCCACCTGCTCCTGCTTTCTGAGTAGTAGAACTTAAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR TCA 72 bp | CCTCTTACCAAAGAACTATGGCCATTTCTCATGAAGTaGTGCTGGGTTTGGTCATTGTTGAGCAGGATATGG | + |
|
Preference number: 3 (lower is better) Translates to: PLTKELWPFLMK*CWVWSLLSRIW Trigger: CCATATCCTGCTCAACAATGACCAAACCCAGCATCACTTCATGAGAAATGGCCATAGTTCTTTGGTAAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR GCA 72 bp | CAGTATGCAGGAAAGATCACTTGCAAGCTTCCTTATTaGATGGGACCCTTGGATGGAATATACAGTCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QYAGKITCKLPY*MGPLDGIYSLK Trigger: CTTGAGACTGTATATTCCATCCAAGGGTCCCATGCAATAAGGAAGCTTGCAAGTGATCTTTCCTGCATACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CCA 72 bp | CACTTGCAAGCTTCCTTATTGCATGGGACCCTTGGATaGAATATACAGTCTCAAGTTCTTGCATCTACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: HLQASLLHGTLG*NIQSQVLASTS Trigger: GCTAGTAGATGCAAGAACTTGAGACTGTATATTCCATCCAAGGGTCCCATGCAATAAGGAAGCTTGCAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CCA 72 bp | TGCCATTCACCAAAGAATCAGAAAAGGAGACAGAACTaGTCCCTAACAGCACACCGTTCAATAGTTGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: CHSPKNQKRRQN*SLTAHRSIVED Trigger: ATCCTCAACTATTGAACGGTGTGCTGTTAGGGACCAGTTCTGTCTCCTTTTCTGATTCTTTGGTGAATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGAGCCTTAAAGCTCGGACTGGTATTGAACTTGCATCTTTCTGCCTCAGTGTATTTCAATAAGGTCTaGGCTACTTCTAAGGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TGALKLGLVLNLHLSASVYFNKV*ATSKGH Trigger: ATGACCCTTAGAAGTAGCCAAGACCTTATTGAAATA...CACTGAGGCAGAAAGATGCAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR TCA 72 bp | ATGTTCCTGGGACATATTTTCAGACCTCTACCTCCATaGCTGGCTTGTTATGCCATTCACCAAAGAATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: MFLGHIFRPLPP*LACYAIHQRIR Trigger: TCTGATTCTTTGGTGAATGGCATAACAAGCCAGTCATGGAGGTAGAGGTCTGAAAATATGTCCCAGGAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR TCA 72 bp | TTTACCATTTGTGTGAGGCAGGAGATTGACCCTCAGTaGTTTCCAACCCACAATTTTGTGCCTGGATCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: FTICVRQEIDPQ*FPTHNFVPGSN Trigger: ATTAGATCCAGGCACAAAATTGTGGGTTGGAAATCACTGAGGGTCAATCTCCTGCCTCACACAAATGGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CCA 72 bp | AGATCACTTGCAAGCTTCCTTATTGCATGGGACCCTTaGATGGAATATACAGTCTCAAGTTCTTGCATCTAC | + |
|
Preference number: 3 (lower is better) Translates to: RSLASFLIAWDP*MEYTVSSSCIY Trigger: GTAGATGCAAGAACTTGAGACTGTATATTCCATCCAAGGGTCCCATGCAATAAGGAAGCTTGCAAGTGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CCA 72 bp | ATGCAGGAAAGATCACTTGCAAGCTTCCTTATTGCATaGGACCCTTGGATGGAATATACAGTCTCAAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: MQERSLASFLIA*DPWMEYTVSSS Trigger: AGAACTTGAGACTGTATATTCCATCCAAGGGTCCCATGCAATAAGGAAGCTTGCAAGTGATCTTTCCTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CCA 72 bp | TCCTGGGACATATTTTCAGACCTCTACCTCCATGACTaGCTTGTTATGCCATTCACCAAAGAATCAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SWDIFSDLYLHD*LVMPFTKESEK Trigger: CTTTTCTGATTCTTTGGTGAATGGCATAACAAGCCAGTCATGGAGGTAGAGGTCTGAAAATATGTCCCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR GCA 72 bp | TATTTTCAGACCTCTACCTCCATGACTGGCTTGTTATaGCATTCACCAAAGAATCAGAAAAGGAGACAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: YFQTSTSMTGLL*HSPKNQKRRQN Trigger: GTTCTGTCTCCTTTTCTGATTCTTTGGTGAATGGCATAACAAGCCAGTCATGGAGGTAGAGGTCTGAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR TCA 72 bp | CATGCGTGCATGGAAGCCTTAATTATATGTAGTTCATaGAGGACTTTTTCACCTTCTCTGCAGTTAGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: HACMEALIICSS*RTFSPSLQLAS Trigger: ACTAGCTAACTGCAGAGAAGGTGAAAAAGTCCTTCATGAACTACATATAATTAAGGCTTCCATGCACGCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAGAGTGTGGGTCCCCCTGGGCATCTCCCCACCTTGGCACATCAAGCTTCTTCACAGAAGAAGTGGTaGATTGCATTGTGGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SESVGPPGHLPTLAHQASSQKKW*IALWEQ Trigger: CTGTTCCCACAATGCAATGCACCACTTCTTCTGTGA...AGAAGCTTGATGTGCCAAGGTGGGGAGATGCCCAGGGGGACCCACACTCTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | TTGAACTTGCATCTTTCTGCCTCAGTGCCTTATGTGTaGGAGTCACGTGCCTGGCCTACCACACCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNLHLSASVPYV*ESRAWPTTPGS Trigger: AGACCCAGGTGTGGTAGGCCAGGCACGTGACTCCAACACATAAGGCACTGAGGCAGAAAGATGCAAGTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATGGGAGCTCCATGTGTCTCTTAAAGAGCCAACTCCAAATGGTGATCTGGGACCTCTTCCTCCTTTaGCTGCCCAGCAATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FHGSSMCLLKSQLQMVIWDLFLL*LPSNSQ Trigger: CTGGGAATTGCTGGGCAGTCAAAGGAGGAAGAGGTC...CCAGATCACCATTTGGAGTTGGCTCTTTAAGAGACACATGGAGCTCCCATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | CGTGCCTGGCCTACCACACCTGGGTCTTCCCATGATTaGTGTTGTATGAATTGCAGAGGGAAATGTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAWPTTPGSSHD*CCMNCRGKCER Trigger: CCTCTCACATTTCCCTCTGCAATTCATACAACACAAATCATGGGAAGACCCAGGTGTGGTAGGCCAGGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGAGCCTTAAAGCTCGGACTGGTATTGAACTTGCATCTTTCTGCCTCAGTGGAGCATGCAGGTTTGTaGTGGCCCATGATATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGALKLGLVLNLHLSASVEHAGL*WPMIWP Trigger: TGGCCATATCATGGGCCATCACAAACCTGCATGCTC...CACTGAGGCAGAAAGATGCAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAACTCCAAATGGTGATCTGGCAGCAGAAACAAAAGCCCCTCTTGGTGGAACTTGGGGACAGTGACTaGGGAAAAACAGATGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQLQMVIWQQKQKPLLVELGDSD*GKTDVN Trigger: GTTGACATCTGTTTTTCCTCAGTCACTGTCCCCAAG...TTCCACCAAGAGGGGCTTTTGTTTCTGCTGCCAGATCACCATTTGGAGTTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATGGGAGCTCCATGTGTCTCTTAAAGAGCCAACTCCAAATGGTGATCTGGGAGCCTTGGGGACAGTaGCTGAGGAAAAACAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FHGSSMCLLKSQLQMVIWEPWGQ*LRKNRC Trigger: ACATCTGTTTTTCCTCAGTCACTGTCCCCAAGGCTC...CCAGATCACCATTTGGAGTTGGCTCTTTAAGAGACACATGGAGCTCCCATGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAACTCCAAATGGTGATCTGGCAGCAGAAACAAAAGCCCCTCTTGGTGGAATGGTGCATTGCATTGTaGGAACAGAAGGTGAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SQLQMVIWQQKQKPLLVEWCIAL*EQKVSR Trigger: TCGACTCACCTTCTGTTCCCACAATGCAATGCACCA...TTCCACCAAGAGGGGCTTTTGTTTCTGCTGCCAGATCACCATTTGGAGTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | GAATGCCACAAAACCTGTGATCACAATGGATACACATaGAAGTCACACTCTGTGCCTGGCACGCTGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ECHKTCDHNGYT*KSHSVPGTLHR Trigger: TCTGTGCAGCGTGCCAGGCACAGAGTGTGACTTCAATGTGTATCCATTGTGATCACAGGTTTTGTGGCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCCATGCACAGTCTCCTTCACAACCATTTAAGTGCCAGCTTCGAGGCTATTGAATTCTATGGCTGTTaGCTGGTTCTCTCTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GAMHSLLHNHLSASFEAIEFYGC*LVLSDH Trigger: ATGGTCAGAGAGAACCAGTCAACAGCCATAGAATTC...AATAGCCTCGAAGCTGGCACTTAAATGGTTGTGAAGGAGACTGTGCATGGCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATGGGAGCTCCATGTGTCTCTTAAAGAGCCAACTCCAAATGGTGATCTGGCACCATGTCCTGTACTaGATATGTAGACGAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FHGSSMCLLKSQLQMVIWHHVLY*ICRRRV Trigger: CACCCTTCGTCTACATATTCAGTACAGGACATGGTG...CCAGATCACCATTTGGAGTTGGCTCTTTAAGAGACACATGGAGCTCCCATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAACTCCAAATGGTGATCTGGCAGCAGAAACAAAAGCCCCTCTTGGTGGAAACCATGAGGAGAGTATaGAAGAGAGCATGCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLQMVIWQQKQKPLLVETMRRV*KRACRF Trigger: AAACCTGCATGCTCTCTTGCATACTCTCCTCATGGT...TTCCACCAAGAGGGGCTTTTGTTTCTGCTGCCAGATCACCATTTGGAGTTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR GCA 90 bp | CATGGGAGCTCCATGTGTCTCTTAAAGAGCCAACTCCAAATGGTGATCTGGCAGGAAGAAGTGGTGCATTaGATTGTGGGAACAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HGSSMCLLKSQLQMVIWQEEVVH*IVGTEG Trigger: ACCTTCTGTTCCCACAATGCAATGCACCACTTCTTC...CTGCCAGATCACCATTTGGAGTTGGCTCTTTAAGAGACACATGGAGCTCCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCTTTCCCTCCCAGTACTGAAGGTAAAAACTGGAGCCTTAAAGCTCGGAGCTTTCCTTATTCCCTaGATAGATGGGAACTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLPVLKVKTGALKLGAFLIP*IDGNFS Trigger: GCTGAAGTTCCCATCTATTCAGGGAATAAGGAAAGC...TCCGAGCTTTAAGGCTCCAGTTTTTACCTTCAGTACTGGGAGGGAAAGAAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | TGTATGAATTGCAGAGGGAAATGTGAGAGGTCAGCCTaGACCTTGGCACTCATGAGCTGGCGTAAAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CMNCRGKCERSA*TLALMSWRKTC Trigger: ACAAGTTTTACGCCAGCTCATGAGTGCCAAGGTCAAGGCTGACCTCTCACATTTCCCTCTGCAATTCATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | ATCCTTGCCTCAGGGATTTGCCAGCCAAACAAAGCATaGAGCCCAGATTTTGGTAGAACAGCATTCCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILASGICQPNKA*SPDFGRTAFLK Trigger: CTTTAGGAATGCTGTTCTACCAAAATCTGGGCTCAATGCTTTGTTTGGCTGGCAAATCCCTGAGGCAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | CCAGTCATGGTGGCACATACCTTTAAATCCCAGTACTaGGGAGGCAAAAGCAAAAAGAGTTCTGTGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVMVAHTFKSQY*GGKSKKSSVSS Trigger: GGAACTCACAGAACTCTTTTTGCTTTTGCCTCCCAAGTACTGGGATTTAAAGGTATGTGCCACCATGACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCATTCACCAAAGAATCAGAAAAGGAGACAGAACTGGTCCCTAACAGCACAAGAACATTCCGAAGATaGCCTCTTCCTCCTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: MPFTKESEKETELVPNSTRTFRR*PLPPLT Trigger: AGTCAAAGGAGGAAGAGGTCATCTTCGGAATGTTCT...TGTGCTGTTAGGGACCAGTTCTGTCTCCTTTTCTGATTCTTTGGTGAATGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGCCTTAAAGCTCGGACTGGTATTGAACTTGCATCTTTCTGCCTCAGTGTATTCCCTGAATAGATaGGAACTTCAGCACATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGALKLGLVLNLHLSASVYSLNR*ELQHIG Trigger: TCCAATGTGCTGAAGTTCCCATCTATTCAGGGAATA...CACTGAGGCAGAAAGATGCAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | AAGGTAAAAACTGGAGCCTTAAAGCTCGGACTGGTATaGAACTTGCATCTTTCTGCCTCAGTGCCTTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: KVKTGALKLGLV*NLHLSASVPYV Trigger: CACATAAGGCACTGAGGCAGAAAGATGCAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGTTTTTACCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | ATGGGACCCTTGGATGGAATATACAGTCTCAAGTTCTaGCATCTACTAGCATCTTCTAAAACTGCTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MGPLDGIYSLKF*HLLASSKTARH Trigger: GTGCCTAGCAGTTTTAGAAGATGCTAGTAGATGCAAGAACTTGAGACTGTATATTCCATCCAAGGGTCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | ACAGTATGCAGGAAAGATCACTTGCAAGCTTCCTTATaGCATGGGACCCTTGGATGGAATATACAGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TVCRKDHLQASL*HGTLGWNIQSQ Trigger: TTGAGACTGTATATTCCATCCAAGGGTCCCATGCAATAAGGAAGCTTGCAAGTGATCTTTCCTGCATACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | GGGACATATTTTCAGACCTCTACCTCCATGACTGGCTaGTTATGCCATTCACCAAAGAATCAGAAAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTYFQTSTSMTG*LCHSPKNQKRR Trigger: TCTCCTTTTCTGATTCTTTGGTGAATGGCATAACAAGCCAGTCATGGAGGTAGAGGTCTGAAAATATGTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | AAGATCACTTGCAAGCTTCCTTATTGCATGGGACCCTaGGATGGAATATACAGTCTCAAGTTCTTGCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: KITCKLPYCMGP*DGIYSLKFLHL Trigger: TAGATGCAAGAACTTGAGACTGTATATTCCATCCAAGGGTCCCATGCAATAAGGAAGCTTGCAAGTGATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | CATATATGTTATTCAACAGTATGCAGGAAAGATCACTaGCAAGCTTCCTTATTGCATGGGACCCTTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HICYSTVCRKDH*QASLLHGTLGW Trigger: CCATCCAAGGGTCCCATGCAATAAGGAAGCTTGCAAGTGATCTTTCCTGCATACTGTTGAATAACATATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | AGGAGATTGACCCTCAGTGATTTCCAACCCACAATTTaGTGCCTGGATCTAATTTTAAACTTTTCTATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RRLTLSDFQPTI*CLDLILNFSIQ Trigger: TTGAATAGAAAAGTTTAAAATTAGATCCAGGCACAAAATTGTGGGTTGGAAATCACTGAGGGTCAATCTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| 3UTR CAA 72 bp | ATTAGTGATTCTAGAGACCTGAACAGGTCAATTTCTTaGTTTTTCAATTTCCTTGAGCTTGTAGACAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISDSRDLNRSIS*FFNFLELVDRK Trigger: TTTCCTGTCTACAAGCTCAAGGAAATTGAAAAACAAAGAAATTGACCTGTTCAGGTCTCTAGAATCACTAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR CAA 90 bp | TCTGAGAGTGTGGGTCCCCCTGGGCATCTCCCCACCTTGGCACATCAAGCTTCTTTCCTGAGGGCTCCTTaGACATCACGATTCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SESVGPPGHLPTLAHQASFLRAP*TSRFLR Trigger: CCTGAGGAATCGTGATGTCAAAGGAGCCCTCAGGAA...AGAAGCTTGATGTGCCAAGGTGGGGAGATGCCCAGGGGGACCCACACTCTCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS GCA 90 bp | GAACAGAAGGTGAGTCGAACCATGAGGAGAGTATGCAAGAGAGCATaGAGGTTTGTGATGGCCCATGATATGGCCACCAGGAGAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: EQKVSRTMRRVCKRA*RFVMAHDMATRRTQ Trigger: CTGTGTTCTCCTGGTGGCCATATCATGGGCCATCACAAACCTGCATGCTCTCTTGCATACTCTCCTCATGGTTCGACTCACCTTCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052285.2 ENSMUST00000213259.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAACTCCAAATGGTGATCTGGCAGCAGAAACAAAAGCCCCTCTTGGTGGAAAAGTGGTGCATTGCATaGTGGGAACAGAAGGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQLQMVIWQQKQKPLLVEKWCIA*WEQKVS Trigger: ACTCACCTTCTGTTCCCACAATGCAATGCACCACTT...TTCCACCAAGAGGGGCTTTTGTTTCTGCTGCCAGATCACCATTTGGAGTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGAGCCTTAAAGCTCGGACTGGTATTGAACTTGCATCTTTCTGCCTCAGTGAGAAGAAGTGGTGCATaGCATTGTGGGAACAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGALKLGLVLNLHLSASVRRSGA*HCGNRR Trigger: CCTTCTGTTCCCACAATGCAATGCACCACTTCTTCT...CACTGAGGCAGAAAGATGCAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTACTGAAGGTAAAAACTGGAGCCTTAAAGCTCGGACTGGTATTGAACTTGAAGGCTGTGATGTCATaGATGAAGGTGTCAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: PVLKVKTGALKLGLVLNLKAVMS*MKVSEQ Trigger: TTGTTCTGACACCTTCATCAATGACATCACAGCCTT...CAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGTTTTTACCTTCAGTACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTACTGAAGGTAAAAACTGGAGCCTTAAAGCTCGGACTGGTATTGAACTTGAGGAAGCCATCCATGTaGATGAATGTGATGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PVLKVKTGALKLGLVLNLRKPSM*MNVMKK Trigger: TTTCTTCATCACATTCATCAACATGGATGGCTTCCT...CAAGTTCAATACCAGTCCGAGCTTTAAGGCTCCAGTTTTTACCTTCAGTACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213259.2 |
||
| CDS TCA 72 bp | CACTGTGAAAAAGGCAGTGGCCACCATGTCCTGTACTaGATATGTAGACGAAGGGTGCATGTAGACCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: HCEKGSGHHVLY*ICRRRVHVDPQ Trigger: CTGGGGGTCTACATGCACCCTTCGTCTACATATTCAGTACAGGACATGGTGGCCACTGCCTTTTTCACAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052285.2 ENSMUST00000213259.2 |
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| CDS GCA 72 bp | AAGAACATTCCGAAGATGACCTCTTCCTCCTTTGACTaGCCAGCAATTCCCAGAAGGAGGAATTCTATGGCT | + |
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Preference number: 6 (lower is better) Translates to: KNIPKMTSSSFD*PAIPRRRNSMA Trigger: AGCCATAGAATTCCTCCTTCTGGGAATTGCTGGGCAGTCAAAGGAGGAAGAGGTCATCTTCGGAATGTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052285.2 ENSMUST00000213259.2 |
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| CDS CCA 72 bp | ACAAGTAGACAGGGCTTTCCTTATTCCCTGAATAGATaGGAACTTCAGCACATTGGAGAGAATATACCCATA | + |
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Preference number: 6 (lower is better) Translates to: TSRQGFPYSLNR*ELQHIGENIPI Trigger: TATGGGTATATTCTCTCCAATGTGCTGAAGTTCCCATCTATTCAGGGAATAAGGAAAGCCCTGTCTACTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052285.2 ENSMUST00000213259.2 |
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