Pregenerated sensors for OLFR1377 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061952Ensembl transcript IDs: ENSMUST00000075177.5, ENSMUST00000213291.3, ENSMUST00000216101.3
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGTCTGCTCTAGAGTCCTGTAAAAGCCCCGAGGCATTGTGGGAGTaGGCAACTGACAGGCTGGGCAGGAGCACCTTAAACCAATTACAA | + |
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Preference number: 1 (lower is better) Translates to: GSALESCKSPEALWE*ATDRLGRSTLNQLQ Trigger: TTGTAATTGGTTTAAGGTGCTCCTGCCCAGCCTGTCAGTTGCTCACTCCCACAATGCCTCGGGGCTTTTACAGGACTCTAGAGCAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR TCA 90 bp | ACTGTCTGCAGCTCCTGGTATTTATCTCTATGCGAAATCCATCCCTaGGGCACCCAGATGCCCATGCTGAGGAGGAAAAGGACAATAGGG | + |
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Preference number: 1 (lower is better) Translates to: TVCSSWYLSLCEIHP*GTQMPMLRRKRTIG Trigger: CCCTATTGTCCTTTTCCTCCTCAGCATGGGCATCTGGGTGCCTCAGGGATGGATTTCGCATAGAGATAAATACCAGGAGCTGCAGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR TCA 90 bp | CACCTTAAACCAATTACAACTAGTTATCCCAGAGTTTCTTGTCTGTaGAATGAGCTCCTCAGAATAAGTCCCTTTCAGAGATGGCAAATC | + |
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Preference number: 1 (lower is better) Translates to: HLKPITTSYPRVSCL*NELLRISPFQRWQI Trigger: GATTTGCCATCTCTGAAAGGGACTTATTCTGAGGAGCTCATTTCACAGACAAGAAACTCTGGGATAACTAGTTGTAATTGGTTTAAGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR GCA 90 bp | ATAAAATACAACCACAAGCATTTGGTATTAGTCCCAGGAAAGCTGTaGTCGAATTCTATACCAATCTATGCATCAGTTTTTCCAGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: IKYNHKHLVLVPGKL*SNSIPIYASVFPER Trigger: TCTTTCTGGAAAAACTGATGCATAGATTGGTATAGAATTCGAGCACAGCTTTCCTGGGACTAATACCAAATGCTTGTGGTTGTATTTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR GCA 90 bp | CACCCAGATGCCCATGCTGAGGAGGAAAAGGACAATAGGGTAGGAGTGGAGCAGGTCCCAGGAAAGCTGTaGTCGAATTCTATACCAATC | + |
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Preference number: 2 (lower is better) Translates to: HPDAHAEEEKDNRVGVEQVPGKL*SNSIPI Trigger: GATTGGTATAGAATTCGAGCACAGCTTTCCTGGGAC...CTGCTCCACTCCTACCCTATTGTCCTTTTCCTCCTCAGCATGGGCATCTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR TCA 90 bp | TTTATCTCTATGCGAAATCCATCCCTGAGGCACCCAGATGCCCATGCTGAGGAGAAATCCCCGCTTTTATaGAAACGAGCATCTGCCATC | + |
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Preference number: 2 (lower is better) Translates to: FISMRNPSLRHPDAHAEEKSPLL*KRASAI Trigger: GATGGCAGATGCTCGTTTTCATAAAAGCGGGGATTT...CTCCTCAGCATGGGCATCTGGGTGCCTCAGGGATGGATTTCGCATAGAGATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR TCA 90 bp | ATAAGTGTGATCTCCTTGCCCTTTTTGTTTTGTACCTGGATATTGTCCATGCATGTGGGAGTGAGCAACTaGCAGGCTGGGCAGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: ISVISLPFLFCTWILSMHVGVSN*QAGQEH Trigger: GTGCTCCTGCCCAGCCTGTCAGTTGCTCACTCCCAC...ATGCATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCACACTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR TCA 90 bp | CATTCCCTTGTACAATGCCGTGTCTACTCACGTTTACTGTTAACTTCATTCTTCGAGGCATTGTGGGAGTaGGCAACTGACAGGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: HSLVQCRVYSRLLLTSFFEALWE*ATDRLG Trigger: GCCCAGCCTGTCAGTTGCTCACTCCCACAATGCCTC...GAAGAATGAAGTTAACAGTAAACGTGAGTAGACACGGCATTGTACAAGGGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGTTAACTTCATTCTTCTGTGTTCCACACAGTGTGCTCTTATTATAAGTGTGGAGGCATTGTGGGAGTaGGCAACTGACAGGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: TVNFILLCSTQCALIISVEALWE*ATDRLG Trigger: GCCCAGCCTGTCAGTTGCTCACTCCCACAATGCCTC...CACACTTATAATAAGAGCACACTGTGTGGAACACAGAAGAATGAAGTTAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR CCA 90 bp | ACAATGCCGTGTCTACTCACGTTTACTGTTAACTTCATTCTTCTGTGTTCCACAAGTCCCTTTCAGAGATaGCAAATCCCCGCTTTTATG | + |
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Preference number: 2 (lower is better) Translates to: TMPCLLTFTVNFILLCSTSPFQR*QIPAFM Trigger: CATAAAAGCGGGGATTTGCCATCTCTGAAAGGGACT...TGTGGAACACAGAAGAATGAAGTTAACAGTAAACGTGAGTAGACACGGCATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR GCA 90 bp | AAGTGTGATCTCCTTGCCCTTTTTGTTTTGTACCTGGATATTGTCCATGCATATGTCCCAGGAAAGCTGTaGTCGAATTCTATACCAATC | + |
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Preference number: 2 (lower is better) Translates to: KCDLLALFVLYLDIVHAYVPGKL*SNSIPI Trigger: GATTGGTATAGAATTCGAGCACAGCTTTCCTGGGAC...ATATGCATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCACACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR CCA 90 bp | ATAAGTGTGATCTCCTTGCCCTTTTTGTTTTGTACCTGGATATTGTCCATGCATAGTCCCTTTCAGAGATaGCAAATCCCCGCTTTTATG | + |
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Preference number: 2 (lower is better) Translates to: ISVISLPFLFCTWILSMHSPFQR*QIPAFM Trigger: CATAAAAGCGGGGATTTGCCATCTCTGAAAGGGACT...ATGCATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCACACTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGTACAATGCCGTGTCTACTCACGTTTACTGTTAACTTCATTCTTCTGTGTTTTCTTGTCTGTGAAATaGGCTCCTCAGAATAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: LVQCRVYSRLLLTSFFCVFLSVK*APQNKS Trigger: GGACTTATTCTGAGGAGCTCATTTCACAGACAAGAA...AACACAGAAGAATGAAGTTAACAGTAAACGTGAGTAGACACGGCATTGTACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR CAA 90 bp | GTATCTTTTATTATGCCACCATATCCTCTGCCTACAAGAATAATGTaGTCTACTGTCTGCAGCTCCTGGTATTTATCTCTATGCGAAATC | + |
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Preference number: 2 (lower is better) Translates to: VSFIMPPYPLPTRIM*STVCSSWYLSLCEI Trigger: GATTTCGCATAGAGATAAATACCAGGAGCTGCAGACAGTAGACAACATTATTCTTGTAGGCAGAGGATATGGTGGCATAATAAAAGATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTTTTCAGTTAGAGACAAAAGGAACACCACATCTCAGTAATGTTGAAATTAAATCCCCGCTTTTATaGAAACGAGCATCTGCCATC | + |
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Preference number: 2 (lower is better) Translates to: TAFQLETKGTPHLSNVEIKSPLL*KRASAI Trigger: GATGGCAGATGCTCGTTTTCATAAAAGCGGGGATTT...AATTTCAACATTACTGAGATGTGGTGTTCCTTTTGTCTCTAACTGAAAAGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR TCA 90 bp | AAGTGTGATCTCCTTGCCCTTTTTGTTTTGTACCTGGATATTGTCCATGCATATAGAGTTTCTTGTCTGTaGAATGAGCTCCTCAGAATA | + |
|
Preference number: 2 (lower is better) Translates to: KCDLLALFVLYLDIVHAYRVSCL*NELLRI Trigger: TATTCTGAGGAGCTCATTTCACAGACAAGAAACTCT...ATATGCATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCACACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTTTTCAGTTAGAGACAAAAGGAACACCACATCTCAGTAATGTTGAAATTAGAAAGATGAACAAGTaGATGATGTCCAGGAATCCT | + |
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Preference number: 2 (lower is better) Translates to: TAFQLETKGTPHLSNVEIRKMNK*MMSRNP Trigger: AGGATTCCTGGACATCATGCACTTGTTCATCTTTCT...AATTTCAACATTACTGAGATGTGGTGTTCCTTTTGTCTCTAACTGAAAAGCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR TCA 72 bp | CTAGAGTCCTGTAAAAGCCCCGAGGCATTGTGGGAGTaGGCAACTGACAGGCTGGGCAGGAGCACCTTAAAC | + |
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Preference number: 3 (lower is better) Translates to: LESCKSPEALWE*ATDRLGRSTLN Trigger: GTTTAAGGTGCTCCTGCCCAGCCTGTCAGTTGCTCACTCCCACAATGCCTCGGGGCTTTTACAGGACTCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR-3UTR CAA 90 bp | AGTGTGATCTCCTTGCCCTTTTTGTTTTGTACCTGGATATTGTCCATGCATATGCCTACAAGAATAATGTaGTCTACTGTCTGCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: SVISLPFLFCTWILSMHMPTRIM*STVCSS Trigger: GGAGCTGCAGACAGTAGACAACATTATTCTTGTAGG...CATATGCATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR GCA 72 bp | CCCAGGAAAGCTGTGCTCGAATTCTATACCAATCTATaGATCAGTTTTTCCAGAAAGATGAACAAGTGCATG | + |
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Preference number: 3 (lower is better) Translates to: PRKAVLEFYTNL*ISFSRKMNKCM Trigger: CATGCACTTGTTCATCTTTCTGGAAAAACTGATGCATAGATTGGTATAGAATTCGAGCACAGCTTTCCTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR TCA 72 bp | CCAATTACAACTAGTTATCCCAGAGTTTCTTGTCTGTaGAATGAGCTCCTCAGAATAAGTCCCTTTCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: PITTSYPRVSCL*NELLRISPFQR Trigger: TCTCTGAAAGGGACTTATTCTGAGGAGCTCATTTCACAGACAAGAAACTCTGGGATAACTAGTTGTAATTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR GCA 72 bp | TATCCTCTGCCTACAAGAATAATGTTGTCTACTGTCTaGAGCTCCTGGTATTTATCTCTATGCGAAATCCAT | + |
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Preference number: 3 (lower is better) Translates to: YPLPTRIMLSTV*SSWYLSLCEIH Trigger: ATGGATTTCGCATAGAGATAAATACCAGGAGCTGCAGACAGTAGACAACATTATTCTTGTAGGCAGAGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR GCA 72 bp | AACCACAAGCATTTGGTATTAGTCCCAGGAAAGCTGTaGTCGAATTCTATACCAATCTATGCATCAGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: NHKHLVLVPGKL*SNSIPIYASVF Trigger: AAAAACTGATGCATAGATTGGTATAGAATTCGAGCACAGCTTTCCTGGGACTAATACCAAATGCTTGTGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR GCA 72 bp | TGGCTATTTATTCTAAAGATGCATTCCCTTGTACAATaGCGTGTCTACTCACGTTTACTGTTAACTTCATTC | + |
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Preference number: 3 (lower is better) Translates to: WLFILKMHSLVQ*RVYSRLLLTSF Trigger: GAATGAAGTTAACAGTAAACGTGAGTAGACACGGCATTGTACAAGGGAATGCATCTTTAGAATAAATAGCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR CCA 72 bp | ATAAGTGTGATCTCCTTGCCCTTTTTGTTTTGTACCTaGATATTGTCCATGCATATGAAGGCTATTAATTGC | + |
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Preference number: 3 (lower is better) Translates to: ISVISLPFLFCT*ILSMHMKAINC Trigger: GCAATTAATAGCCTTCATATGCATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCACACTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR TCA 90 bp | ATCTACATGTTCCTCATCAGAAGCCAGCAAGAGCAGATCAGAGGGGTCTGCTCTGAGCCTTGGGGACAGTaGCTGAGGAAAAGCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: IYMFLIRSQQEQIRGVCSEPWGQ*LRKSRC Trigger: ACATCTGCTTTTCCTCAGTCACTGTCCCCAAGGCTC...AGAGCAGACCCCTCTGATCTGCTCTTGCTGGCTTCTGATGAGGAACATGTAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR TCA 90 bp | ATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGGAATCCTCTCAGGGACTTCCTCCTGCTCTaGCTTTCCAGAGAGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: ISFSRKMNKCMMSRNPLRDFLLL*LSREPQ Trigger: CTGGGGCTCTCTGGAAAGTCAGAGCAGGAGGAAGTC...CCTGAGAGGATTCCTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR TCA 90 bp | CACCCAGATGCCCATGCTGAGGAGGAAAAGGACAATAGGGTAGGAGTGGAGCAGGGAAACAACAATGCATaGAAACGGTGTCAGGAATAT | + |
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Preference number: 4 (lower is better) Translates to: HPDAHAEEEKDNRVGVEQGNNNA*KRCQEY Trigger: ATATTCCTGACACCGTTTTCATGCATTGTTGTTTCC...CTGCTCCACTCCTACCCTATTGTCCTTTTCCTCCTCAGCATGGGCATCTGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR TCA 90 bp | ATAAGTGTGATCTCCTTGCCCTTTTTGTTTTGTACCTGGATATTGTCCATGCATGACTTCCTCCTGCTCTaGCTTTCCAGAGAGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: ISVISLPFLFCTWILSMHDFLLL*LSREPQ Trigger: CTGGGGCTCTCTGGAAAGTCAGAGCAGGAGGAAGTC...ATGCATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCACACTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR TCA 90 bp | ATGCATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGGAATCCTCTGAGCCTTGGGGACAGTaGCTGAGGAAAAGCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: MHQFFQKDEQVHDVQESSEPWGQ*LRKSRC Trigger: ACATCTGCTTTTCCTCAGTCACTGTCCCCAAGGCTC...AGAGGATTCCTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGATGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR GCA 90 bp | TGCATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGGAATCCTCTCAAGACGACTTCCTCCTaGTCTGACTTTCCAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: CISFSRKMNKCMMSRNPLKTTSS*SDFPES Trigger: GCTCTCTGGAAAGTCAGAGCAGGAGGAAGTCGTCTT...GAGAGGATTCCTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CCA 90 bp | CTATGCATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGGAATCCTGGGTCGCAGAAGAAGTaGTGCACTGCATTGTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LCISFSRKMNKCMMSRNPGSQKK*CTALWE Trigger: TTCCCACAATGCAGTGCACCACTTCTTCTGCGACCC...AGGATTCCTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGATGCATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR TCA 90 bp | GGAAAGCTGTGCTCGAATTCTATACCAATCTATGCATCAGTTTTTCCAGAAAGAGAGCCTTGGGGACAGTaGCTGAGGAAAAGCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: GKLCSNSIPIYASVFPEREPWGQ*LRKSRC Trigger: ACATCTGCTTTTCCTCAGTCACTGTCCCCAAGGCTC...TCTTTCTGGAAAAACTGATGCATAGATTGGTATAGAATTCGAGCACAGCTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CCA 90 bp | CATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGGAATCCTCTCAGGGAGGACACAGAGTCTaGATCTCATCATCATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: HQFFQKDEQVHDVQESSQGGHRV*ISSSWC Trigger: ACACCATGATGATGAGATCCAGACTCTGTGTCCTCC...CTGAGAGGATTCCTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CCA 90 bp | ATAAGTGTGATCTCCTTGCCCTTTTTGTTTTGTACCTGGATATTGTCCATGCATGGGTCGCAGAAGAAGTaGTGCACTGCATTGTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: ISVISLPFLFCTWILSMHGSQKK*CTALWE Trigger: TTCCCACAATGCAGTGCACCACTTCTTCTGCGACCC...ATGCATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCACACTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CCA 90 bp | AGTGTGATCTCCTTGCCCTTTTTGTTTTGTACCTGGATATTGTCCATGCATATGGGAGGACACAGAGTCTaGATCTCATCATCATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SVISLPFLFCTWILSMHMGGHRV*ISSSWC Trigger: ACACCATGATGATGAGATCCAGACTCTGTGTCCTCC...CATATGCATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCACACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR GCA 90 bp | GAAAGCTGTGCTCGAATTCTATACCAATCTATGCATCAGTTTTTCCAGAAAGATAAGACGACTTCCTCCTaGTCTGACTTTCCAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ESCARILYQSMHQFFQKDKTTSS*SDFPES Trigger: GCTCTCTGGAAAGTCAGAGCAGGAGGAAGTCGTCTT...ATCTTTCTGGAAAAACTGATGCATAGATTGGTATAGAATTCGAGCACAGCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR GCA 90 bp | TACCAATCTATGCATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGGTAGCCACCGTGTCCTaGAGAGAATATGAGGATGAA | + |
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Preference number: 4 (lower is better) Translates to: YQSMHQFFQKDEQVHDVQVATVS*REYEDE Trigger: TTCATCCTCATATTCTCTGCAGGACACGGTGGCTAC...CTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGATGCATAGATTGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CCA 90 bp | CTTGTACAATGCCGTGTCTACTCACGTTTACTGTTAACTTCATTCTTCTGTGTTGGAGGACACAGAGTCTaGATCTCATCATCATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LVQCRVYSRLLLTSFFCVGGHRV*ISSSWC Trigger: ACACCATGATGATGAGATCCAGACTCTGTGTCCTCC...AACACAGAAGAATGAAGTTAACAGTAAACGTGAGTAGACACGGCATTGTACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR GCA 90 bp | GTATCTTTTATTATGCCACCATATCCTCTGCCTACAAGAATAATGTTGTCTACTAAGACGACTTCCTCCTaGTCTGACTTTCCAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VSFIMPPYPLPTRIMLSTKTTSS*SDFPES Trigger: GCTCTCTGGAAAGTCAGAGCAGGAGGAAGTCGTCTT...AGTAGACAACATTATTCTTGTAGGCAGAGGATATGGTGGCATAATAAAAGATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR GCA 90 bp | CATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGGAATCCTCTCAGAATAGATCTGGATCATaGACTCTGTGTAAGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: HQFFQKDEQVHDVQESSQNRSGS*TLCKRW Trigger: CCATCTCTTACACAGAGTGCATGATCCAGATCTATT...CTGAGAGGATTCCTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR GCA 90 bp | GTATCTTTTATTATGCCACCATATCCTCTGCCTACAAGAATAATGTTGTCTACTGTAGCCACCGTGTCCTaGAGAGAATATGAGGATGAA | + |
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Preference number: 4 (lower is better) Translates to: VSFIMPPYPLPTRIMLSTVATVS*REYEDE Trigger: TTCATCCTCATATTCTCTGCAGGACACGGTGGCTAC...AGTAGACAACATTATTCTTGTAGGCAGAGGATATGGTGGCATAATAAAAGATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR CAA 72 bp | ATTATGCCACCATATCCTCTGCCTACAAGAATAATGTaGTCTACTGTCTGCAGCTCCTGGTATTTATCTCTA | + |
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Preference number: 4 (lower is better) Translates to: IMPPYPLPTRIM*STVCSSWYLSL Trigger: TAGAGATAAATACCAGGAGCTGCAGACAGTAGACAACATTATTCTTGTAGGCAGAGGATATGGTGGCATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR CAA 72 bp | TCCACACAGTGTGCTCTTATTATAAGTGTGATCTCCTaGCCCTTTTTGTTTTGTACCTGGATATTGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: STQCALIISVIS*PFLFCTWILSM Trigger: CATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCACACTTATAATAAGAGCACACTGTGTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR TCA 90 bp | CAATCTATGCATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGGAAGGAAACAACAATGCATaGAAACGGTGTCAGGAATAT | + |
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Preference number: 4 (lower is better) Translates to: QSMHQFFQKDEQVHDVQEGNNNA*KRCQEY Trigger: ATATTCCTGACACCGTTTTCATGCATTGTTGTTTCC...TTCCTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGATGCATAGATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR TCA 90 bp | CAATTACAACTAGTTATCCCAGAGTTTCTTGTCTGTGAAATGAGCTCCTCAGAAGGAAACAACAATGCATaGAAACGGTGTCAGGAATAT | + |
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Preference number: 4 (lower is better) Translates to: QLQLVIPEFLVCEMSSSEGNNNA*KRCQEY Trigger: ATATTCCTGACACCGTTTTCATGCATTGTTGTTTCC...TTCTGAGGAGCTCATTTCACAGACAAGAAACTCTGGGATAACTAGTTGTAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR GCA 90 bp | CAGGAAAGCTGTGCTCGAATTCTATACCAATCTATGCATCAGTTTTTCCAGAAAAATAGATCTGGATCATaGACTCTGTGTAAGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: QESCARILYQSMHQFFQKNRSGS*TLCKRW Trigger: CCATCTCTTACACAGAGTGCATGATCCAGATCTATT...TTTCTGGAAAAACTGATGCATAGATTGGTATAGAATTCGAGCACAGCTTTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR GCA 90 bp | CAGGAAAGCTGTGCTCGAATTCTATACCAATCTATGCATCAGTTTTTCCAGAAACATAGGAAACAACAATaGATGAAAACGGTGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QESCARILYQSMHQFFQKHRKQQ*MKTVSG Trigger: TCCTGACACCGTTTTCATGCATTGTTGTTTCCTATG...TTTCTGGAAAAACTGATGCATAGATTGGTATAGAATTCGAGCACAGCTTTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR GCA 90 bp | CAATCTATGCATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGGAACATAGGAAACAACAATaGATGAAAACGGTGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QSMHQFFQKDEQVHDVQEHRKQQ*MKTVSG Trigger: TCCTGACACCGTTTTCATGCATTGTTGTTTCCTATG...TTCCTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGATGCATAGATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR CAA 72 bp | ATCTGCCATCTTGAAATAAAATACAACCACAAGCATTaGGTATTAGTCCCAGGAAAGCTGTGCTCGAATTCT | + |
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Preference number: 4 (lower is better) Translates to: ICHLEIKYNHKH*VLVPGKLCSNS Trigger: AGAATTCGAGCACAGCTTTCCTGGGACTAATACCAAATGCTTGTGGTTGTATTTTATTTCAAGATGGCAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR GCA 90 bp | GAAAGCTGTGCTCGAATTCTATACCAATCTATGCATCAGTTTTTCCAGAAAGATCATAGGAAACAACAATaGATGAAAACGGTGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ESCARILYQSMHQFFQKDHRKQQ*MKTVSG Trigger: TCCTGACACCGTTTTCATGCATTGTTGTTTCCTATG...ATCTTTCTGGAAAAACTGATGCATAGATTGGTATAGAATTCGAGCACAGCTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR CAA 72 bp | GTGATCTCCTTGCCCTTTTTGTTTTGTACCTGGATATaGTCCATGCATATGAAGGCTATTAATTGCTATTTG | + |
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Preference number: 4 (lower is better) Translates to: VISLPFLFCTWI*SMHMKAINCYL Trigger: CAAATAGCAATTAATAGCCTTCATATGCATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR CAA 72 bp | TCTTATTATAAGTGTGATCTCCTTGCCCTTTTTGTTTaGTACCTGGATATTGTCCATGCATATGAAGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SYYKCDLLALFV*YLDIVHAYEGY Trigger: ATAGCCTTCATATGCATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCACACTTATAATAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| 3UTR CAA 72 bp | AGACAAAAGGAACACCACATCTCAGTAATGTTGAAATaGGCTATTTATTCTAAAGATGCATTCCCTTGTACA | + |
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Preference number: 4 (lower is better) Translates to: RQKEHHISVMLK*AIYSKDAFPCT Trigger: TGTACAAGGGAATGCATCTTTAGAATAAATAGCCAATTTCAACATTACTGAGATGTGGTGTTCCTTTTGTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS TCA 90 bp | CATGAGGAGAGTATGCAAGAGAGCATGCAGGTTTGTGATGACCCATaGTATGGCCACCAGGAGGACACAGAGTCTGGATCTCATCATCAT | + |
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Preference number: 5 (lower is better) Translates to: HEESMQESMQVCDDP*YGHQEDTESGSHHH Trigger: ATGATGATGAGATCCAGACTCTGTGTCCTCCTGGTGGCCATATCATGGGTCATCACAAACCTGCATGCTCTCTTGCATACTCTCCTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CAA 90 bp | ATGCATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGGAATCCTCTTGGTTCACCAGAGCCTaGGGGACAGTGACTGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: MHQFFQKDEQVHDVQESSWFTRA*GTVTEE Trigger: TTCCTCAGTCACTGTCCCCAAGGCTCTGGTGAACCA...AGAGGATTCCTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGATGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CAA 90 bp | CATTCCCTTGTACAATGCCGTGTCTACTCACGTTTACTGTTAACTTCATTCTTCTGGTTCACCAGAGCCTaGGGGACAGTGACTGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: HSLVQCRVYSRLLLTSFFWFTRA*GTVTEE Trigger: TTCCTCAGTCACTGTCCCCAAGGCTCTGGTGAACCA...GAAGAATGAAGTTAACAGTAAACGTGAGTAGACACGGCATTGTACAAGGGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CAA 90 bp | CAATCTATGCATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGGAATGGTTCACCAGAGCCTaGGGGACAGTGACTGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: QSMHQFFQKDEQVHDVQEWFTRA*GTVTEE Trigger: TTCCTCAGTCACTGTCCCCAAGGCTCTGGTGAACCA...TTCCTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGATGCATAGATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CAA 90 bp | TGCATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGGAATCCTCTCAAGTGGTGCACTGCATaGTGGGAACAGAAGGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: CISFSRKMNKCMMSRNPLKWCTA*WEQKVS Trigger: ACTCACCTTCTGTTCCCACAATGCAGTGCACCACTT...GAGAGGATTCCTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS TCA 90 bp | CTTCAGGACCTTAGAGAAGATGTAAACATAGGAAACAACAATGCATaGAAACGGTGTCAGGAATATCACTCCACCCACAGTGAAGACCAT | + |
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Preference number: 5 (lower is better) Translates to: LQDLREDVNIGNNNA*KRCQEYHSTHSEDH Trigger: ATGGTCTTCACTGTGGGTGGAGTGATATTCCTGACACCGTTTTCATGCATTGTTGTTTCCTATGTTTACATCTTCTCTAAGGTCCTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CAA 90 bp | AGCATCTGCCATCTTGAAATAAAATACAACCACAAGCATTTGGTATTAGTCCCAAAGTGGTGCACTGCATaGTGGGAACAGAAGGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: SICHLEIKYNHKHLVLVPKWCTA*WEQKVS Trigger: ACTCACCTTCTGTTCCCACAATGCAGTGCACCACTT...TGGGACTAATACCAAATGCTTGTGGTTGTATTTTATTTCAAGATGGCAGATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CAA 90 bp | CCAGGAAAGCTGTGCTCGAATTCTATACCAATCTATGCATCAGTTTTTCCAGAAAAGACCATCAGGTCATaGATGAAGGTGTCAGAACAA | + |
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Preference number: 5 (lower is better) Translates to: PGKLCSNSIPIYASVFPEKTIRS*MKVSEQ Trigger: TTGTTCTGACACCTTCATCAATGACCTGATGGTCTT...TTCTGGAAAAACTGATGCATAGATTGGTATAGAATTCGAGCACAGCTTTCCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CAA 90 bp | ATAAGTGTGATCTCCTTGCCCTTTTTGTTTTGTACCTGGATATTGTCCATGCATAAGACCATCAGGTCATaGATGAAGGTGTCAGAACAA | + |
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Preference number: 5 (lower is better) Translates to: ISVISLPFLFCTWILSMHKTIRS*MKVSEQ Trigger: TTGTTCTGACACCTTCATCAATGACCTGATGGTCTT...ATGCATGGACAATATCCAGGTACAAAACAAAAAGGGCAAGGAGATCACACTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS-3UTR CAA 90 bp | TACCAATCTATGCATCAGTTTTTCCAGAAAGATGAACAAGTGCATGATGTCCAGAAGACCATCAGGTCATaGATGAAGGTGTCAGAACAA | + |
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Preference number: 5 (lower is better) Translates to: YQSMHQFFQKDEQVHDVQKTIRS*MKVSEQ Trigger: TTGTTCTGACACCTTCATCAATGACCTGATGGTCTT...CTGGACATCATGCACTTGTTCATCTTTCTGGAAAAACTGATGCATAGATTGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS GCA 72 bp | AGATCTGGATCATGCACTCTGTGTAAGAGATGGACTTaGTTCCCAACACGTGGTTCACCAGAGCCTTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: RSGSCTLCKRWT*FPTRGSPEPWG Trigger: TCCCCAAGGCTCTGGTGAACCACGTGTTGGGAAGCAAGTCCATCTCTTACACAGAGTGCATGATCCAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS GCA 72 bp | TACATGCCTAAGAACATTCCAAAGACGACTTCCTCCTaGTCTGACTTTCCAGAGAGCCCCAGAAGGAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: YMPKNIPKTTSS*SDFPESPRRRN Trigger: ATTCCTCCTTCTGGGGCTCTCTGGAAAGTCAGAGCAGGAGGAAGTCGTCTTTGGAATGTTCTTAGGCATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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| CDS CCA 72 bp | ACATGTAGACAGGGCTTTCCTTATCCCGCGGGCAGATaGTATCTTCAGGACCTTAGAGAAGATGTAAACATA | + |
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Preference number: 6 (lower is better) Translates to: TCRQGFPYPAGR*YLQDLREDVNI Trigger: TATGTTTACATCTTCTCTAAGGTCCTGAAGATACCATCTGCCCGCGGGATAAGGAAAGCCCTGTCTACATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075177.5 ENSMUST00000213291.3 ENSMUST00000216101.3 |
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