Pregenerated sensors for OLFR1368 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045474Ensembl transcript IDs: ENSMUST00000055298.6, ENSMUST00000216039.3
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCAACACATCCACTGCATCCCAGTCAGAACATGAAGCAACTGACTaGATTGCATCCACAGCTGTGAAGTTAAACATAGTGAAAGTCAAC | + |
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Preference number: 1 (lower is better) Translates to: FNTSTASQSEHEATD*IASTAVKLNIVKVN Trigger: GTTGACTTTCACTATGTTTAACTTCACAGCTGTGGATGCAATGCAGTCAGTTGCTTCATGTTCTGACTGGGATGCAGTGGATGTGTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216039.3 |
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| 3UTR GCA 72 bp | TCCACTGCATCCCAGTCAGAACATGAAGCAACTGACTaGATTGCATCCACAGCTGTGAAGTTAAACATAGTG | + |
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Preference number: 3 (lower is better) Translates to: STASQSEHEATD*IASTAVKLNIV Trigger: CACTATGTTTAACTTCACAGCTGTGGATGCAATGCAGTCAGTTGCTTCATGTTCTGACTGGGATGCAGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216039.3 |
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| 3UTR GCA 72 bp | GATGATGCCAGGGAAATGGTCCTGAATGAACTGATCTaGCACTATGACAAGGGCCAAGATATATTTCCACAT | + |
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Preference number: 3 (lower is better) Translates to: DDAREMVLNELI*HYDKGQDIFPH Trigger: ATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCATTTCCCTGGCATCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | CTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAGGAATAAGAGGAGACATTCTGTaGCTCCCAGGTCCAGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LICHYDKGQDIFPHSGGIRGDIL*LPGPGQ Trigger: TTGCCCTGGACCTGGGAGCCACAGAATGTCTCCTCT...TATTCCTCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | ATTCTAGGTACAGATGATGCCAGGGAAATGGTCCTGAATGAACTGATCTGCCACGACAGCACCATCTTCTaGCAAAGCACAGGGTGCATT | + |
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Preference number: 4 (lower is better) Translates to: ILGTDDAREMVLNELICHDSTIF*QSTGCI Trigger: AATGCACCCTGTGCTTTGCCAGAAGATGGTGCTGTC...GTGGCAGATCAGTTCATTCAGGACCATTTCCCTGGCATCATCTGTACCTAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | AGGGAAATGGTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATACCGGTGCCCACACCTTaGCAACTTCAAAGTCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: REMVLNELICHYDKGQDIPVPTP*QLQSQG Trigger: TCCTTGACTTTGAAGTTGCCAAGGTGTGGGCACCGG...TATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCATTTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR GCA 90 bp | ATGGTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCATTATCCACTTCCCGGTaGCCACACCTTGGCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: MVLNELICHYDKGQDIFPLSTSR*PHLGNF Trigger: GAAGTTGCCAAGGTGTGGGCACCGGGAAGTGGATAA...TGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR TCA 90 bp | GAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAGGAACCTTGTCGCTGACTTaGTCTTCATCACAGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: ELICHYDKGQDIFPHSGGTLSLT*SSSQLE Trigger: CTCAAGCTGTGATGAAGATCAAGTCAGCGACAAGGT...TCCTCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR GCA 90 bp | AATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGATTATCCACTTCCCGGTaGCCACACCTTGGCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: NELICHYDKGQDIFPHSGLSTSR*PHLGNF Trigger: GAAGTTGCCAAGGTGTGGGCACCGGGAAGTGGATAA...TCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | AATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAGACAGCACCATCTTCTaGCAAAGCACAGGGTGCATT | + |
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Preference number: 4 (lower is better) Translates to: NELICHYDKGQDIFPHSGDSTIF*QSTGCI Trigger: AATGCACCCTGTGCTTTGCCAGAAGATGGTGCTGTC...TCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | ATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAGGAATATTTCCGGTGCCCACACCTTaGCAACTTCAAAGTCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: ICHYDKGQDIFPHSGGIFPVPTP*QLQSQG Trigger: TCCTTGACTTTGAAGTTGCCAAGGTGTGGGCACCGG...AAATATTCCTCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | ATGGTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCAGTTACAACTGTGAGGTaGGAGCCACATGTATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: MVLNELICHYDKGQDIFPVTTVR*EPHVLR Trigger: CCTCAATACATGTGGCTCCCACCTCACAGTTGTAAC...TGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR TCA 90 bp | AGGGAAATGGTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATAAAAATCCCAGAAGGATaGAGTCTGTCTCAGAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: REMVLNELICHYDKGQDIKIPEG*SLSQSF Trigger: AAAGCTCTGAGACAGACTTCATCCTTCTGGGATTTT...TATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCATTTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | GAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAGGACGATCTCAATCACTCTaGAGTAAACACAAGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: ELICHYDKGQDIFPHSGGRSQSL*SKHKPS Trigger: AGATGGCTTGTGTTTACTCCAGAGTGATTGAGATCG...TCCTCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | CTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGTTACAACTGTGAGGTaGGAGCCACATGTATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LNELICHYDKGQDIFPHSVTTVR*EPHVLR Trigger: CCTCAATACATGTGGCTCCCACCTCACAGTTGTAAC...AGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR TCA 90 bp | AATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAAAACACAAGCCATCTTaGTCAATGCAGGCATTTCGC | + |
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Preference number: 4 (lower is better) Translates to: NELICHYDKGQDIFPHSGKHKPS*SMQAFR Trigger: GCGAAATGCCTGCATTGATCAAGATGGCTTGTGTTT...TCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR TCA 90 bp | GTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATAATTGTCCTTCCTCATaGGATATGGTGTTCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: VLNELICHYDKGQDIFPHNCPSS*DMVFCG Trigger: ACCACAGAACACCATATCTCATGAGGAAGGACAATT...ATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR TCA 90 bp | GAGAAAATTCTAGGTACAGATGATGCCAGGGAAATGGTCCTGAATGAACTGATCAATTGTCCTTCCTCATaGGATATGGTGTTCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: EKILGTDDAREMVLNELINCPSS*DMVFCG Trigger: ACCACAGAACACCATATCTCATGAGGAAGGACAATT...GATCAGTTCATTCAGGACCATTTCCCTGGCATCATCTGTACCTAGAATTTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216039.3 |
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| CDS-3UTR GCA 90 bp | GAAATGGTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTGAAGACAAAGACAACTaGAGAGATGATGTGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: EMVLNELICHYDKGQDIFEDKDN*RDDVLQ Trigger: CTGGAGCACATCATCTCTGCAGTTGTCTTTGTCTTC...AAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | TCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAGGAATATTTTAGGGCAAAGAAGAACTaGAGTACACACCCTCCGTAT | + |
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Preference number: 4 (lower is better) Translates to: SATMTRAKIYFHILEEYFRAKKN*STHPPY Trigger: ATACGGAGGGTGTGTACTCCAGTTCTTCTTTGCCCT...AAAATATTCCTCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR TCA 90 bp | GAAATGGTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTAAAATCCCAGAAGGATaGAGTCTGTCTCAGAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: EMVLNELICHYDKGQDIFKIPEG*SLSQSF Trigger: AAAGCTCTGAGACAGACTTCATCCTTCTGGGATTTT...AAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR TCA 90 bp | ATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAGGAATATTTAAACACAAGCCATCTTaGTCAATGCAGGCATTTCGC | + |
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Preference number: 4 (lower is better) Translates to: ICHYDKGQDIFPHSGGIFKHKPS*SMQAFR Trigger: GCGAAATGCCTGCATTGATCAAGATGGCTTGTGTTT...AAATATTCCTCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | AGGGAAATGGTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATAATTTACCAGCATCTGTaGGACAATGCTAGTAGTATA | + |
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Preference number: 4 (lower is better) Translates to: REMVLNELICHYDKGQDIIYQHL*DNASSI Trigger: TATACTACTAGCATTGTCCCACAGATGCTGGTAAAT...TATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCATTTCCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | CTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAGGAATAATTTACCAGCATCTGTaGGACAATGCTAGTAGTATA | + |
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Preference number: 4 (lower is better) Translates to: LICHYDKGQDIFPHSGGIIYQHL*DNASSI Trigger: TATACTACTAGCATTGTCCCACAGATGCTGGTAAAT...TATTCCTCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | ACAGCTGTGAAGTTAAACATAGTGAAAGTCAACATTGTGCCTGAGAAAATTCTAAGGGCAAAGAAGAACTaGAGTACACACCCTCCGTAT | + |
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Preference number: 4 (lower is better) Translates to: TAVKLNIVKVNIVPEKILRAKKN*STHPPY Trigger: ATACGGAGGGTGTGTACTCCAGTTCTTCTTTGCCCT...TAGAATTTTCTCAGGCACAATGTTGACTTTCACTATGTTTAACTTCACAGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | CTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAGGAATACTTCCTCATGAGATATaGTGTTCTGTGGTTTCATAT | + |
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Preference number: 4 (lower is better) Translates to: LICHYDKGQDIFPHSGGILPHEI*CSVVSY Trigger: ATATGAAACCACAGAACACCATATCTCATGAGGAAG...TATTCCTCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CCA 90 bp | ATGGTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACTTCCTCATGAGATATaGTGTTCTGTGGTTTCATAT | + |
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Preference number: 4 (lower is better) Translates to: MVLNELICHYDKGQDIFPLPHEI*CSVVSY Trigger: ATATGAAACCACAGAACACCATATCTCATGAGGAAG...TGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS CCA 90 bp | AAGAGGAGACATTCTGTGGCTCCCAGGTCCAGGGCAAAGAAGAACTaGAGTACACACCCTCCGTATGTAATAGACTTCTTTGGGCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: KRRHSVAPRSRAKKN*STHPPYVIDFFGPH Trigger: ATGGGGCCCAAAGAAGTCTATTACATACGGAGGGTGTGTACTCCAGTTCTTCTTTGCCCTGGACCTGGGAGCCACAGAATGTCTCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CAA 90 bp | CTAGGTACAGATGATGCCAGGGAAATGGTCCTGAATGAACTGATCTGCCACTATGATGATGTGCTCCAGTaGGGGTCGACTGGAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: LGTDDAREMVLNELICHYDDVLQ*GSTGKS Trigger: GGATTTTCCAGTCGACCCCAACTGGAGCACATCATC...ATAGTGGCAGATCAGTTCATTCAGGACCATTTCCCTGGCATCATCTGTACCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216039.3 |
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| CDS-3UTR CAA 90 bp | GAAGCAACTGACTGCATTGCATCCACAGCTGTGAAGTTAAACATAGTGAAAGTCCCCGGTGCCCACACCTaGGCAACTTCAAAGTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: EATDCIASTAVKLNIVKVPGAHT*ATSKSR Trigger: CCTTGACTTTGAAGTTGCCAAGGTGTGGGCACCGGG...GACTTTCACTATGTTTAACTTCACAGCTGTGGATGCAATGCAGTCAGTTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216039.3 |
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| CDS-3UTR CAA 90 bp | GAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAGGAGATGATGTGCTCCAGTaGGGGTCGACTGGAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: ELICHYDKGQDIFPHSGGDDVLQ*GSTGKS Trigger: GGATTTTCCAGTCGACCCCAACTGGAGCACATCATC...TCCTCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CAA 90 bp | GAAATGGTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCCGGTGCCCACACCTaGGCAACTTCAAAGTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: EMVLNELICHYDKGQDIFPGAHT*ATSKSR Trigger: CCTTGACTTTGAAGTTGCCAAGGTGTGGGCACCGGG...AAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS GCA 90 bp | GGTTGTGTTTCCTACCAGAGTCACAATATAGAAGACAAAGACAACTaGAGAGATGATGTGCTCCAGTTGGGGTCGACTGGAAAATCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GCVSYQSHNIEDKDN*RDDVLQLGSTGKSQ Trigger: CTGGGATTTTCCAGTCGACCCCAACTGGAGCACATCATCTCTGCAGTTGTCTTTGTCTTCTATATTGTGACTCTGGTAGGAAACACAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CAA 90 bp | ATGGTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCATGGGAGCCACATGTATaGAGGACCTTTCTCCACCTT | + |
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Preference number: 5 (lower is better) Translates to: MVLNELICHYDKGQDIFPWEPHV*RTFLHL Trigger: AAGGTGGAGAAAGGTCCTCAATACATGTGGCTCCCA...TGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CAA 90 bp | GAAATGGTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTTGGGAGCCACATGTATaGAGGACCTTTCTCCACCTT | + |
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Preference number: 5 (lower is better) Translates to: EMVLNELICHYDKGQDIFWEPHV*RTFLHL Trigger: AAGGTGGAGAAAGGTCCTCAATACATGTGGCTCCCA...AAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CAA 90 bp | GAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAGGAGATCTTCATCACAGCTaGAGTGATAACTGCATAGGA | + |
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Preference number: 5 (lower is better) Translates to: ELICHYDKGQDIFPHSGGDLHHS*SDNCIG Trigger: TCCTATGCAGTTATCACTCAAGCTGTGATGAAGATC...TCCTCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CAA 90 bp | AGGGAAATGGTCCTGAATGAACTGATCTGCCACTATGACAAGGGCCAAGATATAACTTTGCCAGAATGCTaGTCCATTCCTAGAATTCTC | + |
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Preference number: 5 (lower is better) Translates to: REMVLNELICHYDKGQDITLPEC*SIPRIL Trigger: GAGAATTCTAGGAATGGACAAGCATTCTGGCAAAGT...TATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTCATTCAGGACCATTTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS-3UTR CAA 90 bp | GAACTGATCTGCCACTATGACAAGGGCCAAGATATATTTCCACATTCTGGAGGAACTTTGCCAGAATGCTaGTCCATTCCTAGAATTCTC | + |
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Preference number: 5 (lower is better) Translates to: ELICHYDKGQDIFPHSGGTLPEC*SIPRIL Trigger: GAGAATTCTAGGAATGGACAAGCATTCTGGCAAAGT...TCCTCCAGAATGTGGAAATATATCTTGGCCCTTGTCATAGTGGCAGATCAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS CCA 72 bp | CATTCTGTGGCTCCCAGGTCCAGGGCAAAGAAGAACTaGAGTACACACCCTCCGTATGTAATAGACTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: HSVAPRSRAKKN*STHPPYVIDFF Trigger: AAAGAAGTCTATTACATACGGAGGGTGTGTACTCCAGTTCTTCTTTGCCCTGGACCTGGGAGCCACAGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS CAA 72 bp | GAAGACAAAGACAACTGCAGAGATGATGTGCTCCAGTaGGGGTCGACTGGAAAATCCCAGAAGGATGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: EDKDNCRDDVLQ*GSTGKSQKDEV Trigger: GACTTCATCCTTCTGGGATTTTCCAGTCGACCCCAACTGGAGCACATCATCTCTGCAGTTGTCTTTGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS TCA 72 bp | GCCACATGTATTGAGGACCTTTCTCCACCTTGTCGCTaGCTTGATCTTCATCACAGCTTGAGTGATAACTGC | + |
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Preference number: 6 (lower is better) Translates to: ATCIEDLSPPCR*LDLHHSLSDNC Trigger: GCAGTTATCACTCAAGCTGTGATGAAGATCAAGTCAGCGACAAGGTGGAGAAAGGTCCTCAATACATGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS GCA 72 bp | TCCTACCAGAGTCACAATATAGAAGACAAAGACAACTaGAGAGATGATGTGCTCCAGTTGGGGTCGACTGGA | + |
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Preference number: 6 (lower is better) Translates to: SYQSHNIEDKDN*RDDVLQLGSTG Trigger: TCCAGTCGACCCCAACTGGAGCACATCATCTCTGCAGTTGTCTTTGTCTTCTATATTGTGACTCTGGTAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS CCA 72 bp | AAGACAAAGACAACTGCAGAGATGATGTGCTCCAGTTaGGGTCGACTGGAAAATCCCAGAAGGATGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: KTKTTAEMMCSS*GRLENPRRMKS Trigger: AGACTTCATCCTTCTGGGATTTTCCAGTCGACCCCAACTGGAGCACATCATCTCTGCAGTTGTCTTTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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| CDS CAA 90 bp | CACAATATAGAAGACAAAGACAACTGCAGAGATGATGTGCTCCAGTaGGGGTCGACTGGAAAATCCCAGAAGGATGAAGTCTGTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: HNIEDKDNCRDDVLQ*GSTGKSQKDEVCLR Trigger: TCTGAGACAGACTTCATCCTTCTGGGATTTTCCAGTCGACCCCAACTGGAGCACATCATCTCTGCAGTTGTCTTTGTCTTCTATATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055298.6 ENSMUST00000216039.3 |
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