Pregenerated sensors for OLFR1366 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048996Ensembl transcript IDs: ENSMUST00000168629.2, ENSMUST00000175637.3, ENSMUST00000205976.3, ENSMUST00000218154.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATATACACCAGGTTGGTCTTGAGCTTACAGAGATCCTTCTGCCCCTaGCTCCTGAGTGCTGGGCTACATGAGATGCTAGCCCACGCGCTA | + |
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Preference number: 1 (lower is better) Translates to: IYTRLVLSLQRSFCP*LLSAGLHEMLAHAL Trigger: TAGCGCGTGGGCTAGCATCTCATGTAGCCCAGCACTCAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCACTCAGGGGGCAGAGGTAGGCAGAACTCTGTGAACCTGAGGCCAGCATGGTTTTGCAGCTTTACATaGAGTTGCCTTACCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: QHSGGRGRQNSVNLRPAWFCSFT*SCLTIS Trigger: GGAGATGGTAAGGCAACTTCATGTAAAGCTGCAAAA...CCATGCTGGCCTCAGGTTCACAGAGTTCTGCCTACCTCTGCCCCCTGAGTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCACTCAGGGGGCAGAGGTAGGCAGAACTCTGTGAACCTGAGGCCAGCATGGCTTCCCCATAGCCTTTaGATATTCTCATCATTCCTA | + |
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Preference number: 2 (lower is better) Translates to: QHSGGRGRQNSVNLRPAWLPHSL*IFSSFL Trigger: TAGGAATGATGAGAATATTCAAAGGCTATGGGGAAG...CCATGCTGGCCTCAGGTTCACAGAGTTCTGCCTACCTCTGCCCCCTGAGTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR TCA 90 bp | ATATACACCAGGTTGGTCTTGAGCTTACAGAGATCCTTCTGCCCCTGCCTCCTGGGCTTTCCTGCCTGTTaGACTCCTTTCAGAGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: IYTRLVLSLQRSFCPCLLGFPAC*TPFREV Trigger: CACTTCTCTGAAAGGAGTTCAACAGGCAGGAAAGCC...CAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCACTCAGGGGGCAGAGGTAGGCAGAACTCTGTGAACCTGAGGCCAGCATGGATTCAATACTCCCTGTaGGGTATAATTTGTACTGTT | + |
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Preference number: 2 (lower is better) Translates to: QHSGGRGRQNSVNLRPAWIQYSL*GIICTV Trigger: AACAGTACAAATTATACCCCACAGGGAGTATTGAAT...CCATGCTGGCCTCAGGTTCACAGAGTTCTGCCTACCTCTGCCCCCTGAGTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CCA 90 bp | ATATACACCAGGTTGGTCTTGAGCTTACAGAGATCCTTCTGCCCCTGCCTCCTGCTGTCTCCTGAGTTTTaGGATTACAGGTTTGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: IYTRLVLSLQRSFCPCLLLSPEF*DYRFAP Trigger: TGGTGCAAACCTGTAATCCCAAAACTCAGGAGACAG...CAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR TCA 90 bp | GTATTTCTTGGTAGTTGGATGTGGTTGCGTGTCTTTAATACCAGCACTCAGGGGCACCAGGTTCTTAGGTaGCCTTTCACTCCATACAGG | + |
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Preference number: 2 (lower is better) Translates to: VFLGSWMWLRVFNTSTQGHQVLR*PFTPYR Trigger: CCTGTATGGAGTGAAAGGTCACCTAAGAACCTGGTG...CCCCTGAGTGCTGGTATTAAAGACACGCAACCACATCCAACTACCAAGAAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR TCA 90 bp | ATCCTTTTACTGCTGTCTCCTGAGTTTTGGGATTACAGGTTTGCACCACCACATGGCTTTCCTGCCTGTTaGACTCCTTTCAGAGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: ILLLLSPEFWDYRFAPPHGFPAC*TPFREV Trigger: CACTTCTCTGAAAGGAGTTCAACAGGCAGGAAAGCC...ATGTGGTGGTGCAAACCTGTAATCCCAAAACTCAGGAGACAGCAGTAAAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CCA 90 bp | ATATACACCAGGTTGGTCTTGAGCTTACAGAGATCCTTCTGCCCCTGCCTCCTGCCACATCTGGCAATTTaGGCTGTCTTAATAATACAT | + |
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Preference number: 2 (lower is better) Translates to: IYTRLVLSLQRSFCPCLLPHLAI*AVLIIH Trigger: ATGTATTATTAAGACAGCCCAAATTGCCAGATGTGG...CAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR TCA 90 bp | GTATTTCTTGGTAGTTGGATGTGGTTGCGTGTCTTTAATACCAGCACTCAGGGGCAGCCTCTTTGGTACTaGGATTACAGATATGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: VFLGSWMWLRVFNTSTQGQPLWY*DYRYES Trigger: TGACTCATATCTGTAATCTCAGTACCAAAGAGGCTG...CCCCTGAGTGCTGGTATTAAAGACACGCAACCACATCCAACTACCAAGAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CCA 90 bp | ATATACACCAGGTTGGTCTTGAGCTTACAGAGATCCTTCTGCCCCTGCCTCCTGATTCAATACTCCCTGTaGGGTATAATTTGTACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: IYTRLVLSLQRSFCPCLLIQYSL*GIICTV Trigger: AACAGTACAAATTATACCCCACAGGGAGTATTGAAT...CAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CCA 90 bp | CTAGTGACTATCCATCCAGTCTTTGTTTTCACCAGGTTCTTAGGTGACCTTTCACTGTCTCCTGAGTTTTaGGATTACAGGTTTGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: LVTIHPVFVFTRFLGDLSLSPEF*DYRFAP Trigger: TGGTGCAAACCTGTAATCCCAAAACTCAGGAGACAG...TGAAAGGTCACCTAAGAACCTGGTGAAAACAAAGACTGGATGGATAGTCACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR TCA 90 bp | CTAGTGACTATCCATCCAGTCTTTGTTTTCACCAGGTTCTTAGGTGACCTTTCAACCATCTCCACCCTTTaGCTTCATATTGTCTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LVTIHPVFVFTRFLGDLSTISTL*LHIVFL Trigger: TAGAAAGACAATATGAAGTCAAAGGGTGGAGATGGT...TGAAAGGTCACCTAAGAACCTGGTGAAAACAAAGACTGGATGGATAGTCACTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR GCA 90 bp | CAGGTTTGCACCACCACATCTGGCAATTTGGGCTGTCTTAATAATACATTAAATATCAGAAGGCTTTCCTaGCTGTTGAACTCCTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: QVCTTTSGNLGCLNNTLNIRRLS*LLNSFQ Trigger: CTGAAAGGAGTTCAACAGGCAGGAAAGCCTTCTGAT...ATTTAATGTATTATTAAGACAGCCCAAATTGCCAGATGTGGTGGTGCAAACCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTACTGTGAGTTTACGTTATTGACACTACTTTTGTTGGTTGCAAACACTTTTATCAGAAGGCTTTCCTaGCTGTTGAACTCCTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: GYCEFTLLTLLLLVANTFIRRLS*LLNSFQ Trigger: CTGAAAGGAGTTCAACAGGCAGGAAAGCCTTCTGAT...AAAAGTGTTTGCAACCAACAAAAGTAGTGTCAATAACGTAAACTCACAGTAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR CAA 90 bp | GTCATTTTGATAAGTAGAAGACTCAGATTTAGTGCAATCTGTCTTTaGCAGCTTTACATGAAGTTGCCTTACCATCTCCACCCTTTGACT | + |
|
Preference number: 2 (lower is better) Translates to: VILISRRLRFSAICL*QLYMKLPYHLHPLT Trigger: AGTCAAAGGGTGGAGATGGTAAGGCAACTTCATGTAAAGCTGCAAAAGACAGATTGCACTAAATCTGAGTCTTCTACTTATCAAAATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR TCA 90 bp | TCCATACAGGTTAACTTATTCATCGTCTTTACTTTTAAATGCCATGCTCTTCCCGGGCTCAAATGGTCATaGTCTGTGATTATGTCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SIQVNLFIVFTFKCHALPGLKWS*SVIMSV Trigger: AACTGACATAATCACAGATCATGACCATTTGAGCCC...GGGAAGAGCATGGCATTTAAAAGTAAAGACGATGAATAAGTTAACCTGTATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR TCA 90 bp | TCCATACAGGTTAACTTATTCATCGTCTTTACTTTTAAATGCCATGCTCTTCCCTTTACTGCTGTCTCCTaGGTTTTGGGATTACAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SIQVNLFIVFTFKCHALPFTAVS*VLGLQV Trigger: AACCTGTAATCCCAAAACTCAGGAGACAGCAGTAAA...GGGAAGAGCATGGCATTTAAAAGTAAAGACGATGAATAAGTTAACCTGTATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR GCA 90 bp | CTAGTGACTATCCATCCAGTCTTTGTTTTCACCAGGTTCTTAGGTGACCTTTCAACTACTTTTGTTGGTTaGAAACACTTTTTGCCAACA | + |
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Preference number: 2 (lower is better) Translates to: LVTIHPVFVFTRFLGDLSTTFVG*KHFLPT Trigger: TGTTGGCAAAAAGTGTTTGCAACCAACAAAAGTAGT...TGAAAGGTCACCTAAGAACCTGGTGAAAACAAAGACTGGATGGATAGTCACTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR CAA 90 bp | AGACTCAGATTTAGTGCAATCTGTCTTTTGCAGCTTTACATGAAGTaGCCTTACCATCTCCACCCTTTGACTTCATATTGTCTTTCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: RLRFSAICLLQLYMK*PYHLHPLTSYCLSN Trigger: ATTAGAAAGACAATATGAAGTCAAAGGGTGGAGATGGTAAGGCAACTTCATGTAAAGCTGCAAAAGACAGATTGCACTAAATCTGAGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR CAA 90 bp | CTACGTAGCTTTGGCTACTGTGAGTTTACGTTATTGACACTACTTTaGTTGGTTGCAAACACTTTTTGCCAACATATACTACTTTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: LRSFGYCEFTLLTLL*LVANTFCQHILLSF Trigger: AAAAGAAAGTAGTATATGTTGGCAAAAAGTGTTTGCAACCAACAAAAGTAGTGTCAATAACGTAAACTCACAGTAGCCAAAGCTACGTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR GCA 72 bp | AGGTTGGTCTTGAGCTTACAGAGATCCTTCTGCCCCTaGCTCCTGAGTGCTGGGCTACATGAGATGCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: RLVLSLQRSFCP*LLSAGLHEMLA Trigger: GGCTAGCATCTCATGTAGCCCAGCACTCAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR GCA 72 bp | TACACCAGGTTGGTCTTGAGCTTACAGAGATCCTTCTaGCCCTGCCTCCTGAGTGCTGGGCTACATGAGATG | + |
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Preference number: 3 (lower is better) Translates to: YTRLVLSLQRSF*PCLLSAGLHEM Trigger: CATCTCATGTAGCCCAGCACTCAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGGGCAGAGGTAGGCAGAACTCTGTGAACCTGAGGCCAGCATGGTCTACATACACCAGGTTGGTCTaGAGCTTACAGAGATCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SGGRGRQNSVNLRPAWSTYTRLV*SLQRSF Trigger: GAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTA...TGTAGACCATGCTGGCCTCAGGTTCACAGAGTTCTGCCTACCTCTGCCCCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | CAGCACTCAGGGGGCAGAGGTAGGCAGAACTCTGTGAACCTGAGGCCAGCATGGCACTACTTTTGTTGGTaGCAAACACTTTTTGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: QHSGGRGRQNSVNLRPAWHYFCW*QTLFAN Trigger: GTTGGCAAAAAGTGTTTGCAACCAACAAAAGTAGTG...CCATGCTGGCCTCAGGTTCACAGAGTTCTGCCTACCTCTGCCCCCTGAGTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGGGCAGAGGTAGGCAGAACTCTGTGAACCTGAGGCCAGCATGGTCTACACCCTTCCACAATGAGTaGCATCAATATCTACTTCAC | + |
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Preference number: 3 (lower is better) Translates to: SGGRGRQNSVNLRPAWSTPFHNE*HQYLLH Trigger: GTGAAGTAGATATTGATGCAACTCATTGTGGAAGGG...TGTAGACCATGCTGGCCTCAGGTTCACAGAGTTCTGCCTACCTCTGCCCCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGGGCAGAGGTAGGCAGAACTCTGTGAACCTGAGGCCAGCATGGTCTACATATATATACACCAGGTaGGTCTTGAGCTTACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: SGGRGRQNSVNLRPAWSTYIYTR*VLSLQR Trigger: TCTCTGTAAGCTCAAGACCAACCTGGTGTATATATA...TGTAGACCATGCTGGCCTCAGGTTCACAGAGTTCTGCCTACCTCTGCCCCCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | GTATTTCTTGGTAGTTGGATGTGGTTGCGTGTCTTTAATACCAGCACTCAGGGGCTCTGTAGCCCAGGCTaGCCTTACACTCCTGATGTT | + |
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Preference number: 3 (lower is better) Translates to: VFLGSWMWLRVFNTSTQGLCSPG*PYTPDV Trigger: AACATCAGGAGTGTAAGGCAAGCCTGGGCTACAGAG...CCCCTGAGTGCTGGTATTAAAGACACGCAACCACATCCAACTACCAAGAAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | CTCTTTGGTACTGAGATTACAGATATGAGTCACCGTATATATACACCAGGTTGGAGGCTTTCCTGCCTGTaGAACTCCTTTCAGAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: LFGTEITDMSHRIYTPGWRLSCL*NSFQRS Trigger: ACTTCTCTGAAAGGAGTTCAACAGGCAGGAAAGCCT...CCAACCTGGTGTATATATACGGTGACTCATATCTGTAATCTCAGTACCAAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | GAGATGCTAGCCCACGCGCTACATTTTACACAAGAGAATGAAACAGTTATAGAAAGGCTTTCCTGCCTGTaGAACTCCTTTCAGAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: EMLAHALHFTQENETVIERLSCL*NSFQRS Trigger: ACTTCTCTGAAAGGAGTTCAACAGGCAGGAAAGCCT...TTCTATAACTGTTTCATTCTCTTGTGTAAAATGTAGCGCGTGGGCTAGCATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | CTAGTGACTATCCATCCAGTCTTTGTTTTCACCAGGTTCTTAGGTGACCTTTCACATTCCTACGTAGCTTaGGCTACTGTGAGTTTACGT | + |
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Preference number: 3 (lower is better) Translates to: LVTIHPVFVFTRFLGDLSHSYVA*ATVSLR Trigger: ACGTAAACTCACAGTAGCCAAAGCTACGTAGGAATG...TGAAAGGTCACCTAAGAACCTGGTGAAAACAAAGACTGGATGGATAGTCACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | CTAGTGACTATCCATCCAGTCTTTGTTTTCACCAGGTTCTTAGGTGACCTTTCATACCATCTCCACCCTTaGACTTCATATTGTCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: LVTIHPVFVFTRFLGDLSYHLHP*TSYCLS Trigger: AGAAAGACAATATGAAGTCAAAGGGTGGAGATGGTA...TGAAAGGTCACCTAAGAACCTGGTGAAAACAAAGACTGGATGGATAGTCACTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | GAGATGCTAGCCCACGCGCTACATTTTACACAAGAGAATGAAACAGTTATAGAAACCACATCTGGCAATTaGGGCTGTCTTAATAATACA | + |
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Preference number: 3 (lower is better) Translates to: EMLAHALHFTQENETVIETTSGN*GCLNNT Trigger: TGTATTATTAAGACAGCCCAAATTGCCAGATGTGGT...TTCTATAACTGTTTCATTCTCTTGTGTAAAATGTAGCGCGTGGGCTAGCATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | CTCTTTGGTACTGAGATTACAGATATGAGTCACCGTATATATACACCAGGTTGGCACTACTTTTGTTGGTaGCAAACACTTTTTGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: LFGTEITDMSHRIYTPGWHYFCW*QTLFAN Trigger: GTTGGCAAAAAGTGTTTGCAACCAACAAAAGTAGTG...CCAACCTGGTGTATATATACGGTGACTCATATCTGTAATCTCAGTACCAAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR TCA 72 bp | TATCCATCCAGTCTTTGTTTTCACCAGGTTCTTAGGTaGCCTTTCACTCCATACAGGTTAACTTATTCATCG | + |
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Preference number: 3 (lower is better) Translates to: YPSSLCFHQVLR*PFTPYRLTYSS Trigger: CGATGAATAAGTTAACCTGTATGGAGTGAAAGGTCACCTAAGAACCTGGTGAAAACAAAGACTGGATGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | GAGATGCTAGCCCACGCGCTACATTTTACACAAGAGAATGAAACAGTTATAGAATTGACACTACTTTTGTaGGTTGCAAACACTTTTTGC | + |
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Preference number: 3 (lower is better) Translates to: EMLAHALHFTQENETVIELTLLL*VANTFC Trigger: GCAAAAAGTGTTTGCAACCAACAAAAGTAGTGTCAA...TTCTATAACTGTTTCATTCTCTTGTGTAAAATGTAGCGCGTGGGCTAGCATCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR-3UTR CAA 90 bp | GGCTACTGTGAGTTTACGTTATTGACACTACTTTTGTTGGTTGCAAACACTTTTACCACATCTGGCAATTaGGGCTGTCTTAATAATACA | + |
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Preference number: 3 (lower is better) Translates to: GYCEFTLLTLLLLVANTFTTSGN*GCLNNT Trigger: TGTATTATTAAGACAGCCCAAATTGCCAGATGTGGT...AAAAGTGTTTGCAACCAACAAAAGTAGTGTCAATAACGTAAACTCACAGTAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| CDS-3UTR TCA 90 bp | CAGCACTCAGGGGGCAGAGGTAGGCAGAACTCTGTGAACCTGAGGCCAGCATGGGAAGTCGGGCCATCATaGGGGTATGCAAGAGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: QHSGGRGRQNSVNLRPAWEVGPS*GYARED Trigger: ATCCTCTCTTGCATACCCTCATGATGGCCCGACTTC...CCATGCTGGCCTCAGGTTCACAGAGTTCTGCCTACCTCTGCCCCCTGAGTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| CDS-3UTR TCA 90 bp | CAGCACTCAGGGGGCAGAGGTAGGCAGAACTCTGTGAACCTGAGGCCAGCATGGGTGGGATCCACAGGTTaGGAATGCTTTGAGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: QHSGGRGRQNSVNLRPAWVGSTG*ECFELS Trigger: GGAAAGCTCAAAGCATTCTCAACCTGTGGATCCCAC...CCATGCTGGCCTCAGGTTCACAGAGTTCTGCCTACCTCTGCCCCCTGAGTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| CDS-3UTR TCA 90 bp | CAGCACTCAGGGGGCAGAGGTAGGCAGAACTCTGTGAACCTGAGGCCAGCATGGCGTATGCCATCACAGTaGGAAGGAAGTTGTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: QHSGGRGRQNSVNLRPAWRMPSQ*EGSCPC Trigger: ACATGGACAACTTCCTTCTCACTGTGATGGCATACG...CCATGCTGGCCTCAGGTTCACAGAGTTCTGCCTACCTCTGCCCCCTGAGTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| CDS-3UTR TCA 90 bp | ATATACACCAGGTTGGTCTTGAGCTTACAGAGATCCTTCTGCCCCTGCCTCCTGCTTGGGGACTGTAGCTaGAGGAAGGCAGAGGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: IYTRLVLSLQRSFCPCLLLGDCS*RKAEVY Trigger: GTAGACCTCTGCCTTCCTTCAGCTACAGTCCCCAAG...CAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| CDS-3UTR TCA 90 bp | TCAGGGGGCAGAGGTAGGCAGAACTCTGTGAACCTGAGGCCAGCATGGTCTACATTTTCAGAGCAGAAATaGAGTCGGGCCATCATGAGG | + |
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Preference number: 4 (lower is better) Translates to: SGGRGRQNSVNLRPAWSTFSEQK*SRAIMR Trigger: CCTCATGATGGCCCGACTTCATTTCTGCTCTGAAAA...TGTAGACCATGCTGGCCTCAGGTTCACAGAGTTCTGCCTACCTCTGCCCCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| CDS-3UTR TCA 90 bp | ATATACACCAGGTTGGTCTTGAGCTTACAGAGATCCTTCTGCCCCTGCCTCCTGATGCCCTGGCCAACTTaGAAAACCCAGGAGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: IYTRLVLSLQRSFCPCLLMPWPT*KTQEEK Trigger: TTTCTCCTCCTGGGTTTTTCAAGTTGGCCAGGGCAT...CAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| CDS-3UTR TCA 90 bp | ATATACACCAGGTTGGTCTTGAGCTTACAGAGATCCTTCTGCCCCTGCCTCCTGAGTGGAATGGTTGGATaGAGGGCTCATATAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: IYTRLVLSLQRSFCPCLLSGMVG*RAHIDS Trigger: GGAATCTATATGAGCCCTTCATCCAACCATTCCACT...CAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| 3UTR CAA 72 bp | AGATATGAGTCACCGTATATATACACCAGGTTGGTCTaGAGCTTACAGAGATCCTTCTGCCCCTGCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RYESPYIYTRLV*SLQRSFCPCLL Trigger: CAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTATATATACGGTGACTCATATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | GTATTTCTTGGTAGTTGGATGTGGTTGCGTGTCTTTAATACCAGCACTCAGGGGGTGGGATCCACAGGTTaGGAATGCTTTGAGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFLGSWMWLRVFNTSTQGVGSTG*ECFELS Trigger: GGAAAGCTCAAAGCATTCTCAACCTGTGGATCCCAC...CCCCTGAGTGCTGGTATTAAAGACACGCAACCACATCCAACTACCAAGAAATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| CDS-3UTR CCA 90 bp | ATATACACCAGGTTGGTCTTGAGCTTACAGAGATCCTTCTGCCCCTGCCTCCTGCTGAATCTTTTTCAGTaGAATGGTTGGATGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IYTRLVLSLQRSFCPCLLLNLFQ*NGWMKG Trigger: GCCCTTCATCCAACCATTCCACTGAAAAAGATTCAG...CAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | CTAGTGACTATCCATCCAGTCTTTGTTTTCACCAGGTTCTTAGGTGACCTTTCAGAAGTCGGGCCATCATaGGGGTATGCAAGAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVTIHPVFVFTRFLGDLSEVGPS*GYARED Trigger: ATCCTCTCTTGCATACCCTCATGATGGCCCGACTTC...TGAAAGGTCACCTAAGAACCTGGTGAAAACAAAGACTGGATGGATAGTCACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| 3UTR CAA 72 bp | GATTACAGATATGAGTCACCGTATATATACACCAGGTaGGTCTTGAGCTTACAGAGATCCTTCTGCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DYRYESPYIYTR*VLSLQRSFCPC Trigger: GCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTATATATACGGTGACTCATATCTGTAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | TCTCATTATATAACCCTGGTTGGCTTCAAACTCTTAGCAATCCTTTTACTGCTGGCAAAGAGAAGCCCTTaGTGCCCTGGCCAACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHYITLVGFKLLAILLLLAKRSP*CPGQLE Trigger: TTCAAGTTGGCCAGGGCATCAAGGGCTTCTCTTTGC...CAGCAGTAAAAGGATTGCTAAGAGTTTGAAGCCAACCAGGGTTATATAATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTACTGCTGTCTCCTGAGTTTTGGGATTACAGGTTTGCACCACCACATAGTGGAATGGTTGGATaGAGGGCTCATATAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILLLLSPEFWDYRFAPPHSGMVG*RAHIDS Trigger: GGAATCTATATGAGCCCTTCATCCAACCATTCCACT...ATGTGGTGGTGCAAACCTGTAATCCCAAAACTCAGGAGACAGCAGTAAAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR CCA 90 bp | CTAGTGACTATCCATCCAGTCTTTGTTTTCACCAGGTTCTTAGGTGACCTTTCAATCCAGGGTAGGAGATaGACTGAGACTTGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVTIHPVFVFTRFLGDLSIQGRR*TETWFG Trigger: TCCAAACCAAGTCTCAGTCCATCTCCTACCCTGGAT...TGAAAGGTCACCTAAGAACCTGGTGAAAACAAAGACTGGATGGATAGTCACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | TCCATACAGGTTAACTTATTCATCGTCTTTACTTTTAAATGCCATGCTCTTCCCGCAAAGAGAAGCCCTTaGTGCCCTGGCCAACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIQVNLFIVFTFKCHALPAKRSP*CPGQLE Trigger: TTCAAGTTGGCCAGGGCATCAAGGGCTTCTCTTTGC...GGGAAGAGCATGGCATTTAAAAGTAAAGACGATGAATAAGTTAACCTGTATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | GGCTACTGTGAGTTTACGTTATTGACACTACTTTTGTTGGTTGCAAACACTTTTATGCCCTGGCCAACTTaGAAAACCCAGGAGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GYCEFTLLTLLLLVANTFMPWPT*KTQEEK Trigger: TTTCTCCTCCTGGGTTTTTCAAGTTGGCCAGGGCAT...AAAAGTGTTTGCAACCAACAAAAGTAGTGTCAATAACGTAAACTCACAGTAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | CAGGTTTGCACCACCACATCTGGCAATTTGGGCTGTCTTAATAATACATTAAATCGTATGCCATCACAGTaGGAAGGAAGTTGTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: QVCTTTSGNLGCLNNTLNRMPSQ*EGSCPC Trigger: ACATGGACAACTTCCTTCTCACTGTGATGGCATACG...ATTTAATGTATTATTAAGACAGCCCAAATTGCCAGATGTGGTGGTGCAAACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | TCTCATTATATAACCCTGGTTGGCTTCAAACTCTTAGCAATCCTTTTACTGCTGTTTTCAGAGCAGAAATaGAGTCGGGCCATCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHYITLVGFKLLAILLLLFSEQK*SRAIMR Trigger: CCTCATGATGGCCCGACTTCATTTCTGCTCTGAAAA...CAGCAGTAAAAGGATTGCTAAGAGTTTGAAGCCAACCAGGGTTATATAATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTTGGTACTGAGATTACAGATATGAGTCACCGTATATATACACCAGGTTGGGAACCATCAACTGATTaGGACTGGTATCAGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFGTEITDMSHRIYTPGWEPSTD*DWYQNR Trigger: CCTGTTCTGATACCAGTCTCAATCAGTTGATGGTTC...CCAACCTGGTGTATATATACGGTGACTCATATCTGTAATCTCAGTACCAAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR CCA 90 bp | GAGATGCTAGCCCACGCGCTACATTTTACACAAGAGAATGAAACAGTTATAGAAGAAACTCAGAGAGGCTaGTTTGGTTTTCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EMLAHALHFTQENETVIEETQRG*FGFPSP Trigger: TGGAGAAGGAAAACCAAACCAGCCTCTCTGAGTTTC...TTCTATAACTGTTTCATTCTCTTGTGTAAAATGTAGCGCGTGGGCTAGCATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR CCA 90 bp | CTAGTGACTATCCATCCAGTCTTTGTTTTCACCAGGTTCTTAGGTGACCTTTCACTGAATCTTTTTCAGTaGAATGGTTGGATGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVTIHPVFVFTRFLGDLSLNLFQ*NGWMKG Trigger: GCCCTTCATCCAACCATTCCACTGAAAAAGATTCAG...TGAAAGGTCACCTAAGAACCTGGTGAAAACAAAGACTGGATGGATAGTCACTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR CCA 90 bp | CAGGTTTGCACCACCACATCTGGCAATTTGGGCTGTCTTAATAATACATTAAATGAAACTCAGAGAGGCTaGTTTGGTTTTCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVCTTTSGNLGCLNNTLNETQRG*FGFPSP Trigger: TGGAGAAGGAAAACCAAACCAGCCTCTCTGAGTTTC...ATTTAATGTATTATTAAGACAGCCCAAATTGCCAGATGTGGTGGTGCAAACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR CCA 90 bp | AAATACTATGGGGCTCAAATGGTCATGATCTGTGATTATGTCAGTTTCAGCATTATCCAGGGTAGGAGATaGACTGAGACTTGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KYYGAQMVMICDYVSFSIIQGRR*TETWFG Trigger: TCCAAACCAAGTCTCAGTCCATCTCCTACCCTGGAT...AATGCTGAAACTGACATAATCACAGATCATGACCATTTGAGCCCCATAGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | AAATACTATGGGGCTCAAATGGTCATGATCTGTGATTATGTCAGTTTCAGCATTGAACCATCAACTGATTaGGACTGGTATCAGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KYYGAQMVMICDYVSFSIEPSTD*DWYQNR Trigger: CCTGTTCTGATACCAGTCTCAATCAGTTGATGGTTC...AATGCTGAAACTGACATAATCACAGATCATGACCATTTGAGCCCCATAGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | TCTCATTATATAACCCTGGTTGGCTTCAAACTCTTAGCAATCCTTTTACTGCTGGACAGAACCATCAACTaGTTGAGACTGGTATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHYITLVGFKLLAILLLLDRTIN*LRLVSE Trigger: TTCTGATACCAGTCTCAATCAGTTGATGGTTCTGTC...CAGCAGTAAAAGGATTGCTAAGAGTTTGAAGCCAACCAGGGTTATATAATGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | CAGGTTTGCACCACCACATCTGGCAATTTGGGCTGTCTTAATAATACATTAAATTCCTTAAGCTGTAAATaGAAGGATTCAATACGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QVCTTTSGNLGCLNNTLNSLSCK*KDSIRG Trigger: CCCCCGTATTGAATCCTTTCATTTACAGCTTAAGGA...ATTTAATGTATTATTAAGACAGCCCAAATTGCCAGATGTGGTGGTGCAAACCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | TCTCATTATATAACCCTGGTTGGCTTCAAACTCTTAGCAATCCTTTTACTGCTGTCCTTAAGCTGTAAATaGAAGGATTCAATACGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHYITLVGFKLLAILLLLSLSCK*KDSIRG Trigger: CCCCCGTATTGAATCCTTTCATTTACAGCTTAAGGA...CAGCAGTAAAAGGATTGCTAAGAGTTTGAAGCCAACCAGGGTTATATAATGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR TCA 90 bp | TCCATACAGGTTAACTTATTCATCGTCTTTACTTTTAAATGCCATGCTCTTCCCGACAGAACCATCAACTaGTTGAGACTGGTATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIQVNLFIVFTFKCHALPDRTIN*LRLVSE Trigger: TTCTGATACCAGTCTCAATCAGTTGATGGTTCTGTC...GGGAAGAGCATGGCATTTAAAAGTAAAGACGATGAATAAGTTAACCTGTATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR GCA 90 bp | TCCATACAGGTTAACTTATTCATCGTCTTTACTTTTAAATGCCATGCTCTTCCCGCCATCATGAGGGTATaGAAGAGAGGATTAAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIQVNLFIVFTFKCHALPAIMRV*KRGLKV Trigger: CACTTTTAATCCTCTCTTGCATACCCTCATGATGGC...GGGAAGAGCATGGCATTTAAAAGTAAAGACGATGAATAAGTTAACCTGTATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR GCA 90 bp | AAATACTATGGGGCTCAAATGGTCATGATCTGTGATTATGTCAGTTTCAGCATTGCCATCATGAGGGTATaGAAGAGAGGATTAAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KYYGAQMVMICDYVSFSIAIMRV*KRGLKV Trigger: CACTTTTAATCCTCTCTTGCATACCCTCATGATGGC...AATGCTGAAACTGACATAATCACAGATCATGACCATTTGAGCCCCATAGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
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| CDS-3UTR CCA 90 bp | GGCTACTGTGAGTTTACGTTATTGACACTACTTTTGTTGGTTGCAAACACTTTTATAACCAAAGCAAGGTaGGATCCACAGGTTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GYCEFTLLTLLLLVANTFITKAR*DPQVEN Trigger: ATTCTCAACCTGTGGATCCCACCTTGCTTTGGTTAT...AAAAGTGTTTGCAACCAACAAAAGTAGTGTCAATAACGTAAACTCACAGTAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR CCA 90 bp | TCTCATTATATAACCCTGGTTGGCTTCAAACTCTTAGCAATCCTTTTACTGCTGTCTTTTTCAGTGGAATaGTTGGATGAAGGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SHYITLVGFKLLAILLLLSFSVE*LDEGLI Trigger: TATGAGCCCTTCATCCAACCATTCCACTGAAAAAGA...CAGCAGTAAAAGGATTGCTAAGAGTTTGAAGCCAACCAGGGTTATATAATGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| 3UTR CAA 72 bp | ATAAGTAGAAGACTCAGATTTAGTGCAATCTGTCTTTaGCAGCTTTACATGAAGTTGCCTTACCATCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISRRLRFSAICL*QLYMKLPYHLH Trigger: GTGGAGATGGTAAGGCAACTTCATGTAAAGCTGCAAAAGACAGATTGCACTAAATCTGAGTCTTCTACTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR CCA 90 bp | TCCATACAGGTTAACTTATTCATCGTCTTTACTTTTAAATGCCATGCTCTTCCCTCTTTTTCAGTGGAATaGTTGGATGAAGGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SIQVNLFIVFTFKCHALPSFSVE*LDEGLI Trigger: TATGAGCCCTTCATCCAACCATTCCACTGAAAAAGA...GGGAAGAGCATGGCATTTAAAAGTAAAGACGATGAATAAGTTAACCTGTATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| 3UTR CAA 72 bp | GGCTACTGTGAGTTTACGTTATTGACACTACTTTTGTaGGTTGCAAACACTTTTTGCCAACATATACTACTT | + |
|
Preference number: 4 (lower is better) Translates to: GYCEFTLLTLLL*VANTFCQHILL Trigger: AAGTAGTATATGTTGGCAAAAAGTGTTTGCAACCAACAAAAGTAGTGTCAATAACGTAAACTCACAGTAGCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| 3UTR CAA 72 bp | TTTGGCTACTGTGAGTTTACGTTATTGACACTACTTTaGTTGGTTGCAAACACTTTTTGCCAACATATACTA | + |
|
Preference number: 4 (lower is better) Translates to: FGYCEFTLLTLL*LVANTFCQHIL Trigger: TAGTATATGTTGGCAAAAAGTGTTTGCAACCAACAAAAGTAGTGTCAATAACGTAAACTCACAGTAGCCAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| 3UTR CAA 72 bp | TTCATTTCAAATAGAAATACTGGATATCTTAGGTCATaGCCCATACTGTACAGAGCATCTGCTTCTATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FISNRNTGYLRS*PILYRASASMN Trigger: ATTCATAGAAGCAGATGCTCTGTACAGTATGGGCAATGACCTAAGATATCCAGTATTTCTATTTGAAATGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS TCA 90 bp | GATGGTACCACAAATATCAGGCCCACCACAGACAGAACCATCAACTaGTTGAGACTGGTATCAGAACAGGAGAGAGGGAGGAGAGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGTTNIRPTTDRTIN*LRLVSEQERGRREL Trigger: CAACTCTCTCCTCCCTCTCTCCTGTTCTGATACCAGTCTCAATCAGTTGATGGTTCTGTCTGTGGTGGGCCTGATATTTGTGGTACCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168629.2 ENSMUST00000175637.3 ENSMUST00000205976.3 ENSMUST00000218154.2 |
||
| CDS-3UTR CAA 90 bp | GTATTTCTTGGTAGTTGGATGTGGTTGCGTGTCTTTAATACCAGCACTCAGGGGGATGCCCTGGCCAACTaGAAAAACCCAGGAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VFLGSWMWLRVFNTSTQGDALAN*KNPGGE Trigger: TTCTCCTCCTGGGTTTTTCAAGTTGGCCAGGGCATC...CCCCTGAGTGCTGGTATTAAAGACACGCAACCACATCCAACTACCAAGAAATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR CAA 90 bp | ATATACACCAGGTTGGTCTTGAGCTTACAGAGATCCTTCTGCCCCTGCCTCCTGCACTTGGAACATATTTaGCTCTGGCCAAGAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IYTRLVLSLQRSFCPCLLHLEHI*LWPRVF Trigger: AAAGACTCTTGGCCAGAGCAAAATATGTTCCAAGTG...CAGGAGGCAGGGGCAGAAGGATCTCTGTAAGCTCAAGACCAACCTGGTGTATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR CAA 90 bp | CTAGTGACTATCCATCCAGTCTTTGTTTTCACCAGGTTCTTAGGTGACCTTTCAGATGCCCTGGCCAACTaGAAAAACCCAGGAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LVTIHPVFVFTRFLGDLSDALAN*KNPGGE Trigger: TTCTCCTCCTGGGTTTTTCAAGTTGGCCAGGGCATC...TGAAAGGTCACCTAAGAACCTGGTGAAAACAAAGACTGGATGGATAGTCACTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR CAA 90 bp | CTCTTTGGTACTGAGATTACAGATATGAGTCACCGTATATATACACCAGGTTGGATGTTCAATAGCATCTaGGGGACTGTAGCTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LFGTEITDMSHRIYTPGWMFNSI*GTVAEG Trigger: TCCTTCAGCTACAGTCCCCAAGATGCTATTGAACAT...CCAACCTGGTGTATATATACGGTGACTCATATCTGTAATCTCAGTACCAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS-3UTR CAA 90 bp | TCCATACAGGTTAACTTATTCATCGTCTTTACTTTTAAATGCCATGCTCTTCCCATGTTCAATAGCATCTaGGGGACTGTAGCTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SIQVNLFIVFTFKCHALPMFNSI*GTVAEG Trigger: TCCTTCAGCTACAGTCCCCAAGATGCTATTGAACAT...GGGAAGAGCATGGCATTTAAAAGTAAAGACGATGAATAAGTTAACCTGTATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175637.3 ENSMUST00000205976.3 |
||
| CDS TCA 72 bp | GAGTGCAAAGAGAAGCCCTTGATGCCCTGGCCAACTTaGAAAACCCAGGAGGAGAAACTCAGAGAGGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ECKEKPLMPWPT*KTQEEKLREAG Trigger: ACCAGCCTCTCTGAGTTTCTCCTCCTGGGTTTTTCAAGTTGGCCAGGGCATCAAGGGCTTCTCTTTGCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168629.2 ENSMUST00000175637.3 ENSMUST00000205976.3 ENSMUST00000218154.2 |
||
| CDS TCA 72 bp | ACAAATATCAGGCCCACCACAGACAGAACCATCAACTaGTTGAGACTGGTATCAGAACAGGAGAGAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TNIRPTTDRTIN*LRLVSEQERGR Trigger: CCTCCCTCTCTCCTGTTCTGATACCAGTCTCAATCAGTTGATGGTTCTGTCTGTGGTGGGCCTGATATTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168629.2 ENSMUST00000175637.3 ENSMUST00000205976.3 ENSMUST00000218154.2 |
||
| CDS CCA 72 bp | TTACTGATGCAGCTGAATCTTTTTCAGTGGAATGGTTaGATGAAGGGCTCATATAGATTCCTGCAATGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLMQLNLFQWNG*MKGSYRFLQWL Trigger: GAGCCATTGCAGGAATCTATATGAGCCCTTCATCCAACCATTCCACTGAAAAAGATTCAGCTGCATCAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000168629.2 ENSMUST00000175637.3 ENSMUST00000205976.3 ENSMUST00000218154.2 |
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