Pregenerated sensors for OLFR1364 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046016Ensembl transcript IDs: ENSMUST00000057453.2, ENSMUST00000206526.3, ENSMUST00000213912.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTGCTTTTCCGCTTCCTTTAAGTTCCTGCTGTGCCCACAGAGGTaGGGAATTACAGAGACTCTTATACAATGTAGAGTTCTAGGTACT | + |
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Preference number: 1 (lower is better) Translates to: GCFSASFKFLLCPQR*GITETLIQCRVLGT Trigger: AGTACCTAGAACTCTACATTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAAAGGAAGCGGAAAAGCACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR GCA 90 bp | TGTAGTTTTTATTATAAAGAAGATCATATGAGGCAAACAGCAGGGTaGTTTTCCGCTTCCTTTAAGTTCCTGCTGTGCCCACAGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: CSFYYKEDHMRQTAG*FSASFKFLLCPQRW Trigger: CCACCTCTGTGGGCACAGCAGGAACTTAAAGGAAGCGGAAAAGCACCCTGCTGTTTGCCTCATATGATCTTCTTTATAATAAAAACTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR TCA 90 bp | CCCAACAGATGTCTGATTGTAGTTTTTATTATAAAGAAGATCATATaGGGCAAACAGCAGGGTGCTTTTCCGCTTCCTTTAAGTTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: PNRCLIVVFIIKKII*GKQQGAFPLPLSSC Trigger: GCAGGAACTTAAAGGAAGCGGAAAAGCACCCTGCTGTTTGCCTCATATGATCTTCTTTATAATAAAAACTACAATCAGACATCTGTTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAGGGTGCTTTTCCGCTTCCTTTAAGTTCCTGCTGTGCCCACAGAGGTGGATTGTGTCATACAGATaGACACACGTACATGCGTGC | + |
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Preference number: 2 (lower is better) Translates to: TAGCFSASFKFLLCPQRWIVSYR*THVHAC Trigger: GCACGCATGTACGTGTGTGCATCTGTATGACACAAT...CCACCTCTGTGGGCACAGCAGGAACTTAAAGGAAGCGGAAAAGCACCCTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAACCAGTCAGCCCTAGCACTGGCAGACACCCAACAGATGTCTGATTGTAGTTTTAAGTTCCTGCTGTaGCCACAGAGGTGGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: GNQSALALADTQQMSDCSFKFLL*PQRWGI Trigger: AATTCCCCACCTCTGTGGGCACAGCAGGAACTTAAA...ACTACAATCAGACATCTGTTGGGTGTCTGCCAGTGCTAGGGCTGACTGGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAGGGTGCTTTTCCGCTTCCTTTAAGTTCCTGCTGTGCCCACAGAGGTGGGATGAGAGACAAACCTaGGATACAGAACACAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: TAGCFSASFKFLLCPQRWDERQT*DTEHKN Trigger: ATTCTTGTGTTCTGTATCTCAGGTTTGTCTCTCATC...CCACCTCTGTGGGCACAGCAGGAACTTAAAGGAAGCGGAAAAGCACCCTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAACCAGTCAGCCCTAGCACTGGCAGACACCCAACAGATGTCTGATTGTAGTATTGTGTCATACAGATaGACACACGTACATGCGTGC | + |
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Preference number: 2 (lower is better) Translates to: GNQSALALADTQQMSDCSIVSYR*THVHAC Trigger: GCACGCATGTACGTGTGTGCATCTGTATGACACAAT...ACTACAATCAGACATCTGTTGGGTGTCTGCCAGTGCTAGGGCTGACTGGTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAATGACGGGGCACTTACATaGCTCTTTCTTCAAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: LSSCCAHRGGELQRLLYNDGALT*LFLQRT Trigger: TGTCCTTTGAAGAAAGAGTCATGTAAGTGCCCCGTC...ATTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR-3UTR GCA 90 bp | TTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAATATGCACACACGTACATaGGTGCAAGCAAATAAATGT | + |
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Preference number: 2 (lower is better) Translates to: LSSCCAHRGGELQRLLYNMHTRT*VQANKC Trigger: ACATTTATTTGCTTGCACGCATGTACGTGTGTGCAT...ATTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAAATGCACACACGTACATaGGTGCAAGCAAATAAATGT | + |
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Preference number: 2 (lower is better) Translates to: FKFLLCPQRWGITETLIQMHTRT*VQANKC Trigger: ACATTTATTTGCTTGCACGCATGTACGTGTGTGCAT...TTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR CCA 72 bp | TGGCTCCTGCCTCCTCCTTCATCCGGAATCTTTCAGTaGAAACCAGTCAGCCCTAGCACTGGCAGACACCCA | + |
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Preference number: 3 (lower is better) Translates to: WLLPPPSSGIFQ*KPVSPSTGRHP Trigger: TGGGTGTCTGCCAGTGCTAGGGCTGACTGGTTTCCACTGAAAGATTCCGGATGAAGGAGGAGGCAGGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR GCA 72 bp | GCAGGGTGCTTTTCCGCTTCCTTTAAGTTCCTGCTGTaGCCACAGAGGTGGGGAATTACAGAGACTCTTATA | + |
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Preference number: 3 (lower is better) Translates to: AGCFSASFKFLL*PQRWGITETLI Trigger: TATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAAAGGAAGCGGAAAAGCACCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGCAGGGTGCTTTTCCGCTTCCTTTAAGTTCCTGCTGTGCCCACAGAGGTGGAGCATCTATTTGAGATaGTACAACACATACTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: TAGCFSASFKFLLCPQRWSIYLR*YNTYSQ Trigger: CTGGGAGTATGTGTTGTACAATCTCAAATAGATGCT...CCACCTCTGTGGGCACAGCAGGAACTTAAAGGAAGCGGAAAAGCACCCTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR CCA 72 bp | TCCGCTTCCTTTAAGTTCCTGCTGTGCCCACAGAGGTaGGGAATTACAGAGACTCTTATACAATGTAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: SASFKFLLCPQR*GITETLIQCRV Trigger: AACTCTACATTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAAAGGAAGCGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAATGTAGAGTGTAAGTATGAAGAATaGACTCATGATTGTGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: SCCAHRGGELQRLLYNVECKYEE*THDCAE Trigger: CTCAGCACAATCATGAGTCAATTCTTCATACTTACA...CTCTACATTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR GCA 72 bp | TATTATAAAGAAGATCATATGAGGCAAACAGCAGGGTaGTTTTCCGCTTCCTTTAAGTTCCTGCTGTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: YYKEDHMRQTAG*FSASFKFLLCP Trigger: TGGGCACAGCAGGAACTTAAAGGAAGCGGAAAAGCACCCTGCTGTTTGCCTCATATGATCTTCTTTATAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR-3UTR CAA 90 bp | TTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAATAGCTTGATACTTAAATaGTGTCATACAGATGCACAC | + |
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Preference number: 3 (lower is better) Translates to: LSSCCAHRGGELQRLLYNSLILK*CHTDAH Trigger: GTGTGCATCTGTATGACACAATTTAAGTATCAAGCT...ATTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR-3UTR CAA 90 bp | CACTTACATGACTCTTTCTTCAAAGGACACTGTGGACCACATCTAGACAAATGTAGCATCTATTTGAGATaGTACAACACATACTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: HLHDSFFKGHCGPHLDKCSIYLR*YNTYSQ Trigger: CTGGGAGTATGTGTTGTACAATCTCAAATAGATGCT...ACATTTGTCTAGATGTGGTCCACAGTGTCCTTTGAAGAAAGAGTCATGTAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR-3UTR CAA 90 bp | CACTTACATGACTCTTTCTTCAAAGGACACTGTGGACCACATCTAGACAAATGTTGTAAGTATGAAGAATaGACTCATGATTGTGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: HLHDSFFKGHCGPHLDKCCKYEE*THDCAE Trigger: CTCAGCACAATCATGAGTCAATTCTTCATACTTACA...ACATTTGTCTAGATGTGGTCCACAGTGTCCTTTGAAGAAAGAGTCATGTAAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| 3UTR TCA 72 bp | TTGAGATTGTACAACACATACTCCCAGTCTCACCATTaGGGATTTTATTGGACAAGCAAAAGTATTTGGATG | + |
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Preference number: 3 (lower is better) Translates to: LRLYNTYSQSHH*GFYWTSKSIWM Trigger: CATCCAAATACTTTTGCTTGTCCAATAAAATCCTCAATGGTGAGACTGGGAGTATGTGTTGTACAATCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CCA 90 bp | ACAGCAGGGTGCTTTTCCGCTTCCTTTAAGTTCCTGCTGTGCCCACAGAGGTGGAATTTCCCTTGGTCCTaGGAAGCCTTGTGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TAGCFSASFKFLLCPQRWNFPWS*EALCPG Trigger: GCCTGGACACAAGGCTTCCCAGGACCAAGGGAAATT...CCACCTCTGTGGGCACAGCAGGAACTTAAAGGAAGCGGAAAAGCACCCTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR GCA 90 bp | ACAGCAGGGTGCTTTTCCGCTTCCTTTAAGTTCCTGCTGTGCCCACAGAGGTGGAAGGGGCTTGCAGATTaGAGTGAAACGGTCGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: TAGCFSASFKFLLCPQRWKGLAD*SETVVS Trigger: GCTTACGACCGTTTCACTGCAATCTGCAAGCCCCTT...CCACCTCTGTGGGCACAGCAGGAACTTAAAGGAAGCGGAAAAGCACCCTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | ACAGCAGGGTGCTTTTCCGCTTCCTTTAAGTTCCTGCTGTGCCCACAGAGGTGGAATGTCCAGCAGAGCTaGGAATGCATAATGACCGAG | + |
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Preference number: 4 (lower is better) Translates to: TAGCFSASFKFLLCPQRWNVQQS*ECIMTE Trigger: CTCGGTCATTATGCATTCTCAGCTCTGCTGGACATT...CCACCTCTGTGGGCACAGCAGGAACTTAAAGGAAGCGGAAAAGCACCCTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | TTTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAAAGAAGCCCAGCAGGATaGACTGTTCCTGGCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FKFLLCPQRWGITETLIQRSPAG*TVPGSS Trigger: AGAGCTGCCAGGAACAGTTCATCCTGCTGGGCTTCT...TTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR GCA 90 bp | TCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAATGTAGAGAAGGGGCTTGCAGATTaGAGTGAAACGGTCGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: SCCAHRGGELQRLLYNVEKGLAD*SETVVS Trigger: GCTTACGACCGTTTCACTGCAATCTGCAAGCCCCTT...CTCTACATTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR GCA 90 bp | TTTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAAGCCTCACCTGACATCTaGCACATCGAGGCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FKFLLCPQRWGITETLIQASPDI*HIEAAS Trigger: TGAAGCTGCCTCGATGTGGCAGATGTCAGGTGAGGC...TTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CCA 90 bp | GGAAACCAGTCAGCCCTAGCACTGGCAGACACCCAACAGATGTCTGATTGTAGTCAAACACAAAGAGGATaGATTCTAGCCTCGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GNQSALALADTQQMSDCSQTQRG*ILASVC Trigger: ACAGACCGAGGCTAGAATCCATCCTCTTTGTGTTTG...ACTACAATCAGACATCTGTTGGGTGTCTGCCAGTGCTAGGGCTGACTGGTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | TTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAATCTAGGCCAAGAAACATaGACAGCTGGACTGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LSSCCAHRGGELQRLLYNLGQET*TAGLHS Trigger: GCTGTGCAGTCCAGCTGTTCATGTTTCTTGGCCTAG...ATTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | TCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAATGTAGAGAAGTTGAAGAGCAATTaGGGGATGGAACTGGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: SCCAHRGGELQRLLYNVEKLKSN*GMELVV Trigger: CACTACCAGTTCCATCCCTCAATTGCTCTTCAACTT...CTCTACATTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CCA 90 bp | TCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAATGTAGAGGTAAGAAATTTCCCTTaGTCCTGGGAAGCCTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SCCAHRGGELQRLLYNVEVRNFP*SWEALC Trigger: ACACAAGGCTTCCCAGGACCAAGGGAAATTTCTTAC...CTCTACATTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | TTTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAAAATGTCCAGCAGAGCTaGGAATGCATAATGACCGAG | + |
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Preference number: 4 (lower is better) Translates to: FKFLLCPQRWGITETLIQNVQQS*ECIMTE Trigger: CTCGGTCATTATGCATTCTCAGCTCTGCTGGACATT...TTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | TTAGTTAGAGTTAATAGAAGACAAAAGTGTTTCAGGATTCCAGTGGCTCAGTTCAGGAAGTGCCTCACCTaGCATCTGCCACATCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LVRVNRRQKCFRIPVAQFRKCLT*HLPHRG Trigger: GCCTCGATGTGGCAGATGTCAGGTGAGGCACTTCCT...GAACTGAGCCACTGGAATCCTGAAACACTTTTGTCTTCTATTAACTCTAACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | TTCTTCAAAGGACACTGTGGACCACATCTAGACAAATGTTTTATCTTATCCTTGAGGAAGTGCCTCACCTaGCATCTGCCACATCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FFKGHCGPHLDKCFILSLRKCLT*HLPHRG Trigger: GCCTCGATGTGGCAGATGTCAGGTGAGGCACTTCCT...CAAGGATAAGATAAAACATTTGTCTAGATGTGGTCCACAGTGTCCTTTGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR GCA 90 bp | TTTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAACACAAGCCTCTTCAGTaGGCCCTTTACATCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: FKFLLCPQRWGITETLIQHKPLQ*ALYILV Trigger: AACAAGGATGTAAAGGGCGCACTGAAGAGGCTTGTG...TTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CCA 90 bp | TTTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAAAGGATGAACTGTTCCTaGCAGCTCTGGTTGATCATG | + |
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Preference number: 4 (lower is better) Translates to: FKFLLCPQRWGITETLIQRMNCS*QLWLIM Trigger: CATGATCAACCAGAGCTGCCAGGAACAGTTCATCCT...TTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CCA 90 bp | CACTTACATGACTCTTTCTTCAAAGGACACTGTGGACCACATCTAGACAAATGTAATTTCCCTTGGTCCTaGGAAGCCTTGTGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: HLHDSFFKGHCGPHLDKCNFPWS*EALCPG Trigger: GCCTGGACACAAGGCTTCCCAGGACCAAGGGAAATT...ACATTTGTCTAGATGTGGTCCACAGTGTCCTTTGAAGAAAGAGTCATGTAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | TTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAATAAGTTGAAGAGCAATTaGGGGATGGAACTGGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: LSSCCAHRGGELQRLLYNKLKSN*GMELVV Trigger: CACTACCAGTTCCATCCCTCAATTGCTCTTCAACTT...ATTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | TTCTTCAAAGGACACTGTGGACCACATCTAGACAAATGTTTTATCTTATCCTTGAGCCTTCCTCCTTCCTaGGGCCGACTTGATCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: FFKGHCGPHLDKCFILSLSLPPS*GRLDPH Trigger: ATGAGGATCAAGTCGGCCTCAGGAAGGAGGAAGGCT...CAAGGATAAGATAAAACATTTGTCTAGATGTGGTCCACAGTGTCCTTTGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | TTAGTTAGAGTTAATAGAAGACAAAAGTGTTTCAGGATTCCAGTGGCTCAGTTCAGCCTTCCTCCTTCCTaGGGCCGACTTGATCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LVRVNRRQKCFRIPVAQFSLPPS*GRLDPH Trigger: ATGAGGATCAAGTCGGCCTCAGGAAGGAGGAAGGCT...GAACTGAGCCACTGGAATCCTGAAACACTTTTGTCTTCTATTAACTCTAACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CCA 90 bp | TTTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAATGTTCCTGGCAGCTCTaGTTGATCATGGCATTAATG | + |
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Preference number: 4 (lower is better) Translates to: FKFLLCPQRWGITETLIQCSWQL*LIMALM Trigger: CATTAATGCCATGATCAACCAGAGCTGCCAGGAACA...TTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CCA 90 bp | TTAAGTTCCTGCTGTGCCCACAGAGGTGGGGAATTACAGAGACTCTTATACAATGTAAGAAATTTCCCTTaGTCCTGGGAAGCCTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LSSCCAHRGGELQRLLYNVRNFP*SWEALC Trigger: ACACAAGGCTTCCCAGGACCAAGGGAAATTTCTTAC...ATTGTATAAGAGTCTCTGTAATTCCCCACCTCTGTGGGCACAGCAGGAACTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | TTAGTTAGAGTTAATAGAAGACAAAAGTGTTTCAGGATTCCAGTGGCTCAGTTCCCTGGCCTCCTAAGTTaGAGAGCAATTGAGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LVRVNRRQKCFRIPVAQFPGLLS*RAIEGW Trigger: CCATCCCTCAATTGCTCTTCAACTTAGGAGGCCAGG...GAACTGAGCCACTGGAATCCTGAAACACTTTTGTCTTCTATTAACTCTAACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | TTCTTCAAAGGACACTGTGGACCACATCTAGACAAATGTTTTATCTTATCCTTGCCTGGCCTCCTAAGTTaGAGAGCAATTGAGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: FFKGHCGPHLDKCFILSLPGLLS*RAIEGW Trigger: CCATCCCTCAATTGCTCTTCAACTTAGGAGGCCAGG...CAAGGATAAGATAAAACATTTGTCTAGATGTGGTCCACAGTGTCCTTTGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CCA 90 bp | TTAGTTAGAGTTAATAGAAGACAAAAGTGTTTCAGGATTCCAGTGGCTCAGTTCAGGATGAACTGTTCCTaGCAGCTCTGGTTGATCATG | + |
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Preference number: 4 (lower is better) Translates to: LVRVNRRQKCFRIPVAQFRMNCS*QLWLIM Trigger: CATGATCAACCAGAGCTGCCAGGAACAGTTCATCCT...GAACTGAGCCACTGGAATCCTGAAACACTTTTGTCTTCTATTAACTCTAACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CCA 90 bp | TTAGTTAGAGTTAATAGAAGACAAAAGTGTTTCAGGATTCCAGTGGCTCAGTTCTGTTCCTGGCAGCTCTaGTTGATCATGGCATTAATG | + |
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Preference number: 4 (lower is better) Translates to: LVRVNRRQKCFRIPVAQFCSWQL*LIMALM Trigger: CATTAATGCCATGATCAACCAGAGCTGCCAGGAACA...GAACTGAGCCACTGGAATCCTGAAACACTTTTGTCTTCTATTAACTCTAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | CACTTACATGACTCTTTCTTCAAAGGACACTGTGGACCACATCTAGACAAATGTTTATCACCGATAAAATaGAAACAGTGCTTTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: HLHDSFFKGHCGPHLDKCLSPIK*KQCFPQ Trigger: CTGTGGAAAGCACTGTTTTCATTTTATCGGTGATAA...ACATTTGTCTAGATGTGGTCCACAGTGTCCTTTGAAGAAAGAGTCATGTAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR TCA 90 bp | TTCTTCAAAGGACACTGTGGACCACATCTAGACAAATGTTTTATCTTATCCTTGTTATCACCGATAAAATaGAAACAGTGCTTTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: FFKGHCGPHLDKCFILSLLSPIK*KQCFPQ Trigger: CTGTGGAAAGCACTGTTTTCATTTTATCGGTGATAA...CAAGGATAAGATAAAACATTTGTCTAGATGTGGTCCACAGTGTCCTTTGAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CAA 90 bp | ACAGCAGGGTGCTTTTCCGCTTCCTTTAAGTTCCTGCTGTGCCCACAGAGGTGGTGGTCCTGGGAAGCCTaGTGTCCAGGCTGCATATAC | + |
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Preference number: 5 (lower is better) Translates to: TAGCFSASFKFLLCPQRWWSWEA*CPGCIY Trigger: GTATATGCAGCCTGGACACAAGGCTTCCCAGGACCA...CCACCTCTGTGGGCACAGCAGGAACTTAAAGGAAGCGGAAAAGCACCCTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CAA 90 bp | TTCTTCAAAGGACACTGTGGACCACATCTAGACAAATGTTTTATCTTATCCTTGGACATGACCAGGGAGTaGAGGAGTCCCACACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: FFKGHCGPHLDKCFILSLDMTRE*RSPTLQ Trigger: CTGGAGTGTGGGACTCCTCAACTCCCTGGTCATGTC...CAAGGATAAGATAAAACATTTGTCTAGATGTGGTCCACAGTGTCCTTTGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CAA 90 bp | TTCTTCAAAGGACACTGTGGACCACATCTAGACAAATGTTTTATCTTATCCTTGGGTAAGAAATTTCCCTaGGTCCTGGGAAGCCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: FFKGHCGPHLDKCFILSLGKKFP*VLGSLV Trigger: CACAAGGCTTCCCAGGACCAAGGGAAATTTCTTACC...CAAGGATAAGATAAAACATTTGTCTAGATGTGGTCCACAGTGTCCTTTGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CAA 90 bp | CACTTACATGACTCTTTCTTCAAAGGACACTGTGGACCACATCTAGACAAATGTAAGATAATGATGATGTaGCCCACTAAAGTCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: HLHDSFFKGHCGPHLDKCKIMMM*PTKVTR Trigger: CCTGGTGACTTTAGTGGGCAACATCATCATTATCTT...ACATTTGTCTAGATGTGGTCCACAGTGTCCTTTGAAGAAAGAGTCATGTAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS-3UTR CAA 90 bp | TTCTTCAAAGGACACTGTGGACCACATCTAGACAAATGTTTTATCTTATCCTTGAAGATAATGATGATGTaGCCCACTAAAGTCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: FFKGHCGPHLDKCFILSLKIMMM*PTKVTR Trigger: CCTGGTGACTTTAGTGGGCAACATCATCATTATCTT...CAAGGATAAGATAAAACATTTGTCTAGATGTGGTCCACAGTGTCCTTTGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS CCA 72 bp | GGTCTGTCTGAGAAGCCCAGCAGGATGAACTGTTCCTaGCAGCTCTGGTTGATCATGGCATTAATGGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: GLSEKPSRMNCS*QLWLIMALMVS Trigger: ACTGACCATTAATGCCATGATCAACCAGAGCTGCCAGGAACAGTTCATCCTGCTGGGCTTCTCAGACAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057453.2 ENSMUST00000206526.3 ENSMUST00000213912.2 |
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| CDS TCA 72 bp | GAGTCAAAGGCACCAGCACGATTATCACCGATAAAATaGAAACAGTGCTTTCCACAGCCACAGTGTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: ESKAPARLSPIK*KQCFPQPQCPH Trigger: GTGTGGACACTGTGGCTGTGGAAAGCACTGTTTTCATTTTATCGGTGATAATCGTGCTGGTGCCTTTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057453.2 ENSMUST00000206526.3 ENSMUST00000213912.2 |
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