Pregenerated sensors for OLFR1361 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049737Ensembl transcript IDs: ENSMUST00000055615.2, ENSMUST00000214321.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCAGGGGTGTGCAGATGGGGCTCCTCACAGCCTCAGATGTCAGTaGAACAGGAAGCAGAATGCAGACAAGAAAGTATGGTGGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: VQGCADGAPHSLRCQ*NRKQNADKKVWWAS Trigger: GCTGGCCCACCATACTTTCTTGTCTGCATTCTGCTTCCTGTTCCACTGACATCTGAGGCTGTGAGGAGCCCCATCTGCACACCCCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR TCA 90 bp | ATTTTCATAATGTATGGGAAGAGTAGAGAAATGAAACCAAACGTTTaGAGCAAGAAGACCCCTCTGTCTTCTCTTGGCATCGATGGGTTA | + |
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Preference number: 1 (lower is better) Translates to: IFIMYGKSREMKPNV*SKKTPLSSLGIDGL Trigger: TAACCCATCGATGCCAAGAGAAGACAGAGGGGTCTTCTTGCTTCAAACGTTTGGTTTCATTTCTCTACTCTTCCCATACATTATGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR GCA 90 bp | TCTCCTCTTAATCTTGCTTTGCATGTGTTCTCCTTTAGCTTTTCTTaGTTGAAAGGCAAACATGAACCATTAAGGTCAATTATGTATGTG | + |
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Preference number: 1 (lower is better) Translates to: SPLNLALHVFSFSFS*LKGKHEPLRSIMYV Trigger: CACATACATAATTGACCTTAATGGTTCATGTTTGCCTTTCAAGCAAGAAAAGCTAAAGGAGAACACATGCAAAGCAAGATTAAGAGGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGCAATATCATGGTGCAGGGGTGTGCAGATGGGGCTCCTCACAGCCTCAGCTCTTAATCTTGCTTTaGATGTGTTCTCCTTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: WQQYHGAGVCRWGSSQPQLLILL*MCSPLA Trigger: AGCTAAAGGAGAACACATGCAAAGCAAGATTAAGAG...CTGAGGCTGTGAGGAGCCCCATCTGCACACCCCTGCACCATGATATTGCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCAGCTCTCAGTGACCCACTTCCATTAGTGAAGTCCCATGTCCCACAGTGTAACACCATTCCCAGCTaGTATTTTGCAGGGATAGAT | + |
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Preference number: 2 (lower is better) Translates to: GPALSDPLPLVKSHVPQCNTIPS*YFAGID Trigger: ATCTATCCCTGCAAAATACCAGCTGGGAATGGTGTT...ACACTGTGGGACATGGGACTTCACTAATGGAAGTGGGTCACTGAGAGCTGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCCCACAGTGTTCCACAACTTTCCCACACAGTACCACCAGCTGGGCATCCAGTCCCAGCTGGTATTTTaGAGGGATAGATTGTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: CPTVFHNFPTQYHQLGIQSQLVF*RDRLLY Trigger: ATACAACAATCTATCCCTGCAAAATACCAGCTGGGA...CTGGATGCCCAGCTGGTGGTACTGTGTGGGAAAGTTGTGGAACACTGTGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCAGCTCTCAGTGACCCACTTCCATTAGTGAAGTCCCATGTCCCACAGTGTTTAGCTTTTCTTGCTTaGAAGGCAAACATGAACCAT | + |
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Preference number: 2 (lower is better) Translates to: GPALSDPLPLVKSHVPQCLAFLA*KANMNH Trigger: ATGGTTCATGTTTGCCTTTCAAGCAAGAAAAGCTAA...ACACTGTGGGACATGGGACTTCACTAATGGAAGTGGGTCACTGAGAGCTGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAGTGAAGTCCCATGTCCCACAGTGTTCCACAACTTTCCCACACAGTACCACTTAAAGCTAGGCGATTaGACCATTTGTTTTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: ISEVPCPTVFHNFPTQYHLKLGD*TICFGS Trigger: AGAGCCAAAACAAATGGTTCAATCGCCTAGCTTTAA...GTGGTACTGTGTGGGAAAGTTGTGGAACACTGTGGGACATGGGACTTCACTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR CAA 90 bp | GTCAATTTTGGTGTTGGAGATGTTAAAGCTAGGCGATTGAACCATTaGTTTTGGCTCTTGGGTAGGCATTTGGCACTAGAAATGCACATT | + |
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Preference number: 2 (lower is better) Translates to: VNFGVGDVKARRLNH*FWLLGRHLALEMHI Trigger: AATGTGCATTTCTAGTGCCAAATGCCTACCCAAGAGCCAAAACAAATGGTTCAATCGCCTAGCTTTAACATCTCCAACACCAAAATTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGGGGAGGCACTGTTGTCAGCATTGTAAACATGAACAGATCAATATTCAGTCCTTTAGCTTTTCTTaGTTGAAAGGCAAACATGAA | + |
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Preference number: 2 (lower is better) Translates to: SRGRHCCQHCKHEQINIQSFSFS*LKGKHE Trigger: TTCATGTTTGCCTTTCAAGCAAGAAAAGCTAAAGGA...CTGAATATTGATCTGTTCATGTTTACAATGCTGACAACAGTGCCTCCCCCTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR CAA 90 bp | CCTCTTAATCTTGCTTTGCATGTGTTCTCCTTTAGCTTTTCTTGCTaGAAAGGCAAACATGAACCATTAAGGTCAATTATGTATGTGACT | + |
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Preference number: 2 (lower is better) Translates to: PLNLALHVFSFSFSC*KGKHEPLRSIMYVT Trigger: AGTCACATACATAATTGACCTTAATGGTTCATGTTTGCCTTTCAAGCAAGAAAAGCTAAAGGAGAACACATGCAAAGCAAGATTAAGAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR CCA 72 bp | CCCTGGCAGCAATATCATGGTGCAGGGGTGTGCAGATaGGGCTCCTCACAGCCTCAGATGTCAGTGGAACAG | + |
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Preference number: 3 (lower is better) Translates to: PWQQYHGAGVCR*GSSQPQMSVEQ Trigger: CTGTTCCACTGACATCTGAGGCTGTGAGGAGCCCCATCTGCACACCCCTGCACCATGATATTGCTGCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCAGCAATATCATGGTGCAGGGGTGTGCAGATGGGGCTCCTCACAGCCTCAGGTTAAAGCTAGGCGATaGAACCATTTGTTTTGGCTC | + |
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Preference number: 3 (lower is better) Translates to: WQQYHGAGVCRWGSSQPQVKARR*NHLFWL Trigger: GAGCCAAAACAAATGGTTCAATCGCCTAGCTTTAAC...CTGAGGCTGTGAGGAGCCCCATCTGCACACCCCTGCACCATGATATTGCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR GCA 72 bp | TCACAGCCTCAGATGTCAGTGGAACAGGAAGCAGAATaGAGACAAGAAAGTATGGTGGGCCAGCTCTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SQPQMSVEQEAE*RQESMVGQLSV Trigger: CACTGAGAGCTGGCCCACCATACTTTCTTGTCTGCATTCTGCTTCCTGTTCCACTGACATCTGAGGCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCCAGCTCTCAGTGACCCACTTCCATTAGTGAAGTCCCATGTCCCACAGTGTGAGTCAATTTTGGTGTaGGAGATGTTAAAGCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: GPALSDPLPLVKSHVPQCESILV*EMLKLG Trigger: GCCTAGCTTTAACATCTCCAACACCAAAATTGACTC...ACACTGTGGGACATGGGACTTCACTAATGGAAGTGGGTCACTGAGAGCTGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCCAGCTCTCAGTGACCCACTTCCATTAGTGAAGTCCCATGTCCCACAGTGTAATGAAACCAAACGTTaGAAGCAAGAAGACCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GPALSDPLPLVKSHVPQCNETKR*KQEDPS Trigger: AGAGGGGTCTTCTTGCTTCAAACGTTTGGTTTCATT...ACACTGTGGGACATGGGACTTCACTAATGGAAGTGGGTCACTGAGAGCTGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR CCA 72 bp | CAGTGTTCCACAACTTTCCCACACAGTACCACCAGCTaGGCATCCAGTGTCCAAACAAGAGATCTCAATGTG | + |
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Preference number: 3 (lower is better) Translates to: QCSTTFPHSTTS*ASSVQTRDLNV Trigger: CACATTGAGATCTCTTGTTTGGACACTGGATGCCCAGCTGGTGGTACTGTGTGGGAAAGTTGTGGAACACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAATAATTTCTGTGACAGCAGGGGGAGGCACTGTTGTCAGCATTGTAAACATCCTCTTAATCTTGCTTaGCATGTGTTCTCCTTTAGC | + |
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Preference number: 3 (lower is better) Translates to: QNNFCDSRGRHCCQHCKHPLNLA*HVFSFS Trigger: GCTAAAGGAGAACACATGCAAAGCAAGATTAAGAGG...ATGTTTACAATGCTGACAACAGTGCCTCCCCCTGCTGTCACAGAAATTATTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGGGGAGGCACTGTTGTCAGCATTGTAAACATGAACAGATCAATATTCAGTTTCTCCTCTTAATCTaGCTTTGCATGTGTTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SRGRHCCQHCKHEQINIQFLLLI*LCMCSP Trigger: AGGAGAACACATGCAAAGCAAGATTAAGAGGAGAAA...CTGAATATTGATCTGTTCATGTTTACAATGCTGACAACAGTGCCTCCCCCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAATAATTTCTGTGACAGCAGGGGGAGGCACTGTTGTCAGCATTGTAAACATATGATGAATGCTAAGTaGGAGGAACTTGAAAGGACA | + |
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Preference number: 3 (lower is better) Translates to: QNNFCDSRGRHCCQHCKHMMNAK*EELERT Trigger: TGTCCTTTCAAGTTCCTCCAACTTAGCATTCATCAT...ATGTTTACAATGCTGACAACAGTGCCTCCCCCTGCTGTCACAGAAATTATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAATAATTTCTGTGACAGCAGGGGGAGGCACTGTTGTCAGCATTGTAAACATCTCTGTGAGTCAATTTaGGTGTTGGAGATGTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: QNNFCDSRGRHCCQHCKHLCESI*VLEMLK Trigger: CTTTAACATCTCCAACACCAAAATTGACTCACAGAG...ATGTTTACAATGCTGACAACAGTGCCTCCCCCTGCTGTCACAGAAATTATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAATAATTTCTGTGACAGCAGGGGGAGGCACTGTTGTCAGCATTGTAAACATTTTAGCTTTTCTTGCTaGAAAGGCAAACATGAACCA | + |
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Preference number: 3 (lower is better) Translates to: QNNFCDSRGRHCCQHCKHFSFSC*KGKHEP Trigger: TGGTTCATGTTTGCCTTTCAAGCAAGAAAAGCTAAA...ATGTTTACAATGCTGACAACAGTGCCTCCCCCTGCTGTCACAGAAATTATTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR TCA 72 bp | TCAATTATGTATGTGACTCAAAACAGACAGGCTCTGTaGGTCAATTTTGGTGTTGGAGATGTTAAAGCTAGG | + |
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Preference number: 3 (lower is better) Translates to: SIMYVTQNRQAL*VNFGVGDVKAR Trigger: CCTAGCTTTAACATCTCCAACACCAAAATTGACTCACAGAGCCTGTCTGTTTTGAGTCACATACATAATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR GCA 72 bp | AATCTTGCTTTGCATGTGTTCTCCTTTAGCTTTTCTTaGTTGAAAGGCAAACATGAACCATTAAGGTCAATT | + |
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Preference number: 3 (lower is better) Translates to: NLALHVFSFSFS*LKGKHEPLRSI Trigger: AATTGACCTTAATGGTTCATGTTTGCCTTTCAAGCAAGAAAAGCTAAAGGAGAACACATGCAAAGCAAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR TCA 90 bp | AGGGGTGTGCAGATGGGGCTCCTCACAGCCTCAGATGTCAGTGGAACAGGAAGCGCTCAACCATGCCACTaGAGCCAGCTGCCCGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RGVQMGLLTASDVSGTGSAQPCH*SQLPAE Trigger: CTCTGCGGGCAGCTGGCTTCAGTGGCATGGTTGAGC...GCTTCCTGTTCCACTGACATCTGAGGCTGTGAGGAGCCCCATCTGCACACCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR TCA 90 bp | TGGCAGCAATATCATGGTGCAGGGGTGTGCAGATGGGGCTCCTCACAGCCTCAGAGGATAAGTTCTAGGTaGGGACGGTCAGAGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: WQQYHGAGVCRWGSSQPQRISSR*GRSEKP Trigger: GGGCTTCTCTGACCGTCCTCACCTAGAACTTATCCT...CTGAGGCTGTGAGGAGCCCCATCTGCACACCCCTGCACCATGATATTGCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR CCA 90 bp | TGGCAGCAATATCATGGTGCAGGGGTGTGCAGATGGGGCTCCTCACAGCCTCAGGTTGTAGAGCATCTGTaGGATGGAACCCGTGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: WQQYHGAGVCRWGSSQPQVVEHL*DGTRGK Trigger: TTTACCACGGGTTCCATCCCACAGATGCTCTACAAC...CTGAGGCTGTGAGGAGCCCCATCTGCACACCCCTGCACCATGATATTGCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR TCA 90 bp | CCCATGTCCCACAGTGTTCCACAACTTTCCCACACAGTACCACCAGCTGGGCATAGAAGCCCACCAGGATaGAGCCTTCAAAAGAACTCG | + |
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Preference number: 4 (lower is better) Translates to: PMSHSVPQLSHTVPPAGHRSPPG*SLQKNS Trigger: CGAGTTCTTTTGAAGGCTTCATCCTGGTGGGCTTCT...ATGCCCAGCTGGTGGTACTGTGTGGGAAAGTTGTGGAACACTGTGGGACATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR TCA 90 bp | TGGCAGCAATATCATGGTGCAGGGGTGTGCAGATGGGGCTCCTCACAGCCTCAGGAGCTGAAAGCAAGATaGTGGTCATGTTGCCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: WQQYHGAGVCRWGSSQPQELKAR*WSCCQE Trigger: TTCTTGGCAACATGACCATCATCTTGCTTTCAGCTC...CTGAGGCTGTGAGGAGCCCCATCTGCACACCCCTGCACCATGATATTGCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR GCA 90 bp | CCCATGTCCCACAGTGTTCCACAACTTTCCCACACAGTACCACCAGCTGGGCATCATCAACGTCTGGGGTaGCATGATGAGAGAATTGCC | + |
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Preference number: 4 (lower is better) Translates to: PMSHSVPQLSHTVPPAGHHQRLG*HDERIA Trigger: GGCAATTCTCTCATCATGGCACCCCAGACGTTGATG...ATGCCCAGCTGGTGGTACTGTGTGGGAAAGTTGTGGAACACTGTGGGACATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR GCA 90 bp | ACAACTTTCCCACACAGTACCACCAGCTGGGCATCCAGTGTCCAAACAAGAGATTGTCCACACAGGCCATaGCAATCAGGGCCGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: TTFPHSTTSWASSVQTRDCPHRP*QSGPAS Trigger: AGATGCCGGCCCTGATTGGCATGGCCTGTGTGGACA...ATCTCTTGTTTGGACACTGGATGCCCAGCTGGTGGTACTGTGTGGGAAAGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR GCA 90 bp | TGGCAGCAATATCATGGTGCAGGGGTGTGCAGATGGGGCTCCTCACAGCCTCAGGATGAGGATGAGCGGTaGCAAGATGATAAAAATCGC | + |
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Preference number: 4 (lower is better) Translates to: WQQYHGAGVCRWGSSQPQDEDER*QDDKNR Trigger: GCGATTTTTATCATCTTGGCACCGCTCATCCTCATC...CTGAGGCTGTGAGGAGCCCCATCTGCACACCCCTGCACCATGATATTGCTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR TCA 90 bp | ATTAGTGAAGTCCCATGTCCCACAGTGTTCCACAACTTTCCCACACAGTACCACCCGTCGCCCAGCAGCTaGCTTGATCCTAAACACTGC | + |
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Preference number: 4 (lower is better) Translates to: ISEVPCPTVFHNFPTQYHPSPSS*LDPKHC Trigger: GCAGTGTTTAGGATCAAGTCAGCTGCTGGGCGACGG...GTGGTACTGTGTGGGAAAGTTGTGGAACACTGTGGGACATGGGACTTCACTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR CCA 90 bp | CCCATGTCCCACAGTGTTCCACAACTTTCCCACACAGTACCACCAGCTGGGCATGAGACAACGATTAAGTaGGAGCTGCAAGTGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PMSHSVPQLSHTVPPAGHETTIK*ELQVLK Trigger: CTTCAACACTTGCAGCTCCCACTTAATCGTTGTCTC...ATGCCCAGCTGGTGGTACTGTGTGGGAAAGTTGTGGAACACTGTGGGACATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR CCA 90 bp | ATTAGTGAAGTCCCATGTCCCACAGTGTTCCACAACTTTCCCACACAGTACCACATCTCACAGAGAAAGTaGTCCACCCGCCTGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ISEVPCPTVFHNFPTQYHISQRK*STRLCP Trigger: TGGACACAGGCGGGTGGACCACTTTCTCTGTGAGAT...GTGGTACTGTGTGGGAAAGTTGTGGAACACTGTGGGACATGGGACTTCACTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR GCA 90 bp | ACAACTTTCCCACACAGTACCACCAGCTGGGCATCCAGTGTCCAAACAAGAGATTTGGGAGTAAGTGTTTaGCGGCTGGAGGTACATGTA | + |
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Preference number: 4 (lower is better) Translates to: TTFPHSTTSWASSVQTRDLGVSV*RLEVHV Trigger: TACATGTACCTCCAGCCGGCAAACACTTACTCCCAA...ATCTCTTGTTTGGACACTGGATGCCCAGCTGGTGGTACTGTGTGGGAAAGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR GCA 90 bp | GGACACAATGGTTTTCAATGTAAGAGGAGTATCATATTCTCTCAACTTATCCTCGCCACTGAAGCCAGCTaGCCGCAGAGACGAGGATGC | + |
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Preference number: 4 (lower is better) Translates to: GHNGFQCKRSIIFSQLILATEAS*PQRRGC Trigger: GCATCCTCGTCTCTGCGGGCAGCTGGCTTCAGTGGC...GAGGATAAGTTGAGAGAATATGATACTCCTCTTACATTGAAAACCATTGTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR GCA 90 bp | CAAAATAATTTCTGTGACAGCAGGGGGAGGCACTGTTGTCAGCATTGTAAACATCAACGCAAAAGCCAGTaGTTCCAAGGCCATAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: QNNFCDSRGRHCCQHCKHQRKSQ*FQGHSV Trigger: GACACTATGGCCTTGGAAGCACTGGCTTTTGCGTTG...ATGTTTACAATGCTGACAACAGTGCCTCCCCCTGCTGTCACAGAAATTATTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR CAA 72 bp | GGTGTTGGAGATGTTAAAGCTAGGCGATTGAACCATTaGTTTTGGCTCTTGGGTAGGCATTTGGCACTAGAA | + |
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Preference number: 4 (lower is better) Translates to: GVGDVKARRLNH*FWLLGRHLALE Trigger: TTCTAGTGCCAAATGCCTACCCAAGAGCCAAAACAAATGGTTCAATCGCCTAGCTTTAACATCTCCAACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR TCA 90 bp | CAAAATAATTTCTGTGACAGCAGGGGGAGGCACTGTTGTCAGCATTGTAAACATTGTTGCCAAGAAGAGTaGGCAGATAAAAGGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: QNNFCDSRGRHCCQHCKHCCQEE*ADKRRE Trigger: TTCTCTCCTTTTATCTGCTCACTCTTCTTGGCAACA...ATGTTTACAATGCTGACAACAGTGCCTCCCCCTGCTGTCACAGAAATTATTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR CAA 72 bp | CTTGCTTTGCATGTGTTCTCCTTTAGCTTTTCTTGCTaGAAAGGCAAACATGAACCATTAAGGTCAATTATG | + |
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Preference number: 4 (lower is better) Translates to: LALHVFSFSFSC*KGKHEPLRSIM Trigger: CATAATTGACCTTAATGGTTCATGTTTGCCTTTCAAGCAAGAAAAGCTAAAGGAGAACACATGCAAAGCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| 3UTR CAA 72 bp | TGGGAAACTAATTCATCTGGCGTTGCCTTAAAGGGCTaGCCAAGTTTGTGTATATATAGAAATATCTACTTT | + |
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Preference number: 4 (lower is better) Translates to: WETNSSGVALKG*PSLCIYRNIYF Trigger: AAAGTAGATATTTCTATATATACACAAACTTGGCAAGCCCTTTAAGGCAACGCCAGATGAATTAGTTTCCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS CCA 90 bp | AAGTGGTCCACCCGCCTGTGTCCACAGCGGGGCAACATCAACGTCTaGGGTGCCATGATGAGAGAATTGCCAAAGCCGCTCAACCATGCC | + |
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Preference number: 5 (lower is better) Translates to: KWSTRLCPQRGNINV*GAMMRELPKPLNHA Trigger: GGCATGGTTGAGCGGCTTTGGCAATTCTCTCATCATGGCACCCCAGACGTTGATGTTGCCCCGCTGTGGACACAGGCGGGTGGACCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055615.2 ENSMUST00000214321.2 |
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| CDS-3UTR CAA 90 bp | AGGGGTGTGCAGATGGGGCTCCTCACAGCCTCAGATGTCAGTGGAACAGGAAGCCGCCCAGCAGCTGACTaGATCCTAAACACTGCTCGG | + |
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Preference number: 5 (lower is better) Translates to: RGVQMGLLTASDVSGTGSRPAAD*ILNTAR Trigger: CCGAGCAGTGTTTAGGATCAAGTCAGCTGCTGGGCG...GCTTCCTGTTCCACTGACATCTGAGGCTGTGAGGAGCCCCATCTGCACACCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS TCA 90 bp | GGGTGCCATGATGAGAGAATTGCCAAAGCCGCTCAACCATGCCACTaGAGCCAGCTGCCCGCAGAGACGAGGATGCATGATGACGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: GCHDERIAKAAQPCH*SQLPAETRMHDDGV Trigger: TACACCGTCATCATGCATCCTCGTCTCTGCGGGCAGCTGGCTTCAGTGGCATGGTTGAGCGGCTTTGGCAATTCTCTCATCATGGCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055615.2 ENSMUST00000214321.2 |
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| CDS-3UTR CAA 90 bp | CCCATGTCCCACAGTGTTCCACAACTTTCCCACACAGTACCACCAGCTGGGCATAAACTTGCCCTGGTCTaGGGAGTAAGTGTTTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: PMSHSVPQLSHTVPPAGHKLALV*GVSVCR Trigger: CCGGCAAACACTTACTCCCAAGACCAGGGCAAGTTT...ATGCCCAGCTGGTGGTACTGTGTGGGAAAGTTGTGGAACACTGTGGGACATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS GCA 90 bp | GATGAGCGGTGCCAAGATGATAAAAATCGCCAACGCAAAAGCCAGTaGTTCCAAGGCCATAGTGTCCACACAGGCCATGCCAATCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: DERCQDDKNRQRKSQ*FQGHSVHTGHANQG Trigger: GCCCTGATTGGCATGGCCTGTGTGGACACTATGGCCTTGGAAGCACTGGCTTTTGCGTTGGCGATTTTTATCATCTTGGCACCGCTCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055615.2 ENSMUST00000214321.2 |
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| CDS-3UTR CAA 90 bp | CTCTTCTGTAATCCTAGACCATTCCTAGGTCTGATAGCATATAAAGAAGGTGGGCTTGGGAGTAAGTGTTaGCCGGCTGGAGGTACATGT | + |
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Preference number: 5 (lower is better) Translates to: LFCNPRPFLGLIAYKEGGLGSKC*PAGGTC Trigger: ACATGTACCTCCAGCCGGCAAACACTTACTCCCAAG...CCCACCTTCTTTATATGCTATCAGACCTAGGAATGGTCTAGGATTACAGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS-3UTR CAA 90 bp | TTGATGATGAATGCTAAGTTGGAGGAACTTGAAAGGACACAATGGTTTTCAATGAAGATGATGGTCATGTaGCCAAGAAGAGTGAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LMMNAKLEELERTQWFSMKMMVM*PRRVSR Trigger: TCTGCTCACTCTTCTTGGCAACATGACCATCATCTT...CATTGAAAACCATTGTGTCCTTTCAAGTTCCTCCAACTTAGCATTCATCATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214321.2 |
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| CDS CCA 72 bp | ACCCGCCTGTGTCCACAGCGGGGCAACATCAACGTCTaGGGTGCCATGATGAGAGAATTGCCAAAGCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: TRLCPQRGNINV*GAMMRELPKPL Trigger: GAGCGGCTTTGGCAATTCTCTCATCATGGCACCCCAGACGTTGATGTTGCCCCGCTGTGGACACAGGCGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055615.2 ENSMUST00000214321.2 |
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| CDS GCA 72 bp | CCTGTGTCCACAGCGGGGCAACATCAACGTCTGGGGTaGCATGATGAGAGAATTGCCAAAGCCGCTCAACCA | + |
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Preference number: 6 (lower is better) Translates to: PVSTAGQHQRLG*HDERIAKAAQP Trigger: TGGTTGAGCGGCTTTGGCAATTCTCTCATCATGGCACCCCAGACGTTGATGTTGCCCCGCTGTGGACACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055615.2 ENSMUST00000214321.2 |
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| CDS TCA 72 bp | GCTGCAAGTGTTGAAGGCTTTCCGTCGCCCAGCAGCTaGCTTGATCCTAAACACTGCTCGGGCAATGTAACC | + |
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Preference number: 6 (lower is better) Translates to: AASVEGFPSPSS*LDPKHCSGNVT Trigger: GGTTACATTGCCCGAGCAGTGTTTAGGATCAAGTCAGCTGCTGGGCGACGGAAAGCCTTCAACACTTGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055615.2 ENSMUST00000214321.2 |
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