Pregenerated sensors for OLFR1359 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000108674Ensembl transcript IDs: ENSMUST00000214435.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GATGGAGCGTGGTGTTCAGTGGCTTTCTCCTTGGCATCCTGCCCGTaGAAGCCACAACACCCAGCTCCTCACAGATCTCTAAAAGGCACT | + |
Preference number: 1 (lower is better) Translates to: DGAWCSVAFSLASCP*KPQHPAPHRSLKGT Trigger: AGTGCCTTTTAGAGATCTGTGAGGAGCTGGGTGTTGTGGCTTTCACGGGCAGGATGCCAAGGAGAAAGCCACTGAACACCACGCTCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR TCA 90 bp | TGGGGCTGGAGAGATGCTCTGTGGTTAAGAGCACACACTGTTCTTTaGGAGGACCTCAGTTCAGTTCTCAGTACCCACATGGCCTCTCAC | + |
Preference number: 1 (lower is better) Translates to: WGWRDALWLRAHTVL*EDLSSVLSTHMASH Trigger: GTGAGAGGCCATGTGGGTACTGAGAACTGAACTGAGGTCCTCTCAAAGAACAGTGTGTGCTCTTAACCACAGAGCATCTCTCCAGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR TCA 90 bp | CCTACCGTGCTAGAAACACTGAGCATTGTAGGACACAGTGTAAATGTTTCCTGCCTCAGGGCTTGCAAATaGATATGTCCAGGCAGGACA | + |
Preference number: 2 (lower is better) Translates to: PTVLETLSIVGHSVNVSCLRACK*ICPGRT Trigger: TGTCCTGCCTGGACATATTCATTTGCAAGCCCTGAG...GCAGGAAACATTTACACTGTGTCCTACAATGCTCAGTGTTTCTAGCACGGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR TCA 90 bp | CCTACCGTGCTAGAAACACTGAGCATTGTAGGACACAGTGTAAATGTTTCCTGCTCGTTCCAGACTTGCTaGCTCAAGGCAATCAACGGA | + |
Preference number: 2 (lower is better) Translates to: PTVLETLSIVGHSVNVSCSFQTC*LKAING Trigger: TCCGTTGATTGCCTTGAGTCAGCAAGTCTGGAACGA...GCAGGAAACATTTACACTGTGTCCTACAATGCTCAGTGTTTCTAGCACGGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR TCA 90 bp | CCTACCGTGCTAGAAACACTGAGCATTGTAGGACACAGTGTAAATGTTTCCTGCGCACACACTGTTCTTTaGGAGGACCTCAGTTCAGTT | + |
Preference number: 2 (lower is better) Translates to: PTVLETLSIVGHSVNVSCAHTVL*EDLSSV Trigger: AACTGAACTGAGGTCCTCTCAAAGAACAGTGTGTGC...GCAGGAAACATTTACACTGTGTCCTACAATGCTCAGTGTTTCTAGCACGGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR CCA 90 bp | TCTTTGAGAGGACCTCAGTTCAGTTCTCAGTACCCACATGGCCTCTCACAACTGGTAGGGATAGCAGACTaGGAAAATCATAGAGTCACT | + |
Preference number: 2 (lower is better) Translates to: SLRGPQFSSQYPHGLSQLVGIAD*ENHRVT Trigger: AGTGACTCTATGATTTTCCCAGTCTGCTATCCCTAC...CAGTTGTGAGAGGCCATGTGGGTACTGAGAACTGAACTGAGGTCCTCTCAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR CCA 90 bp | CCTACCGTGCTAGAAACACTGAGCATTGTAGGACACAGTGTAAATGTTTCCTGCTACAGTGAACAGGAGTaGACATCATGGTGGACTGCT | + |
Preference number: 2 (lower is better) Translates to: PTVLETLSIVGHSVNVSCYSEQE*TSWWTA Trigger: AGCAGTCCACCATGATGTCCACTCCTGTTCACTGTA...GCAGGAAACATTTACACTGTGTCCTACAATGCTCAGTGTTTCTAGCACGGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR TCA 90 bp | CCTACCGTGCTAGAAACACTGAGCATTGTAGGACACAGTGTAAATGTTTCCTGCAGAAGAAAAGTACAGTaGACAGGAGTGGACATCATG | + |
Preference number: 2 (lower is better) Translates to: PTVLETLSIVGHSVNVSCRRKVQ*TGVDIM Trigger: CATGATGTCCACTCCTGTTCACTGTACTTTTCTTCT...GCAGGAAACATTTACACTGTGTCCTACAATGCTCAGTGTTTCTAGCACGGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR TCA 90 bp | CCTACCGTGCTAGAAACACTGAGCATTGTAGGACACAGTGTAAATGTTTCCTGCAGCACTGTTGAATTGTaGAAGCAATATGAGAGAAGT | + |
Preference number: 2 (lower is better) Translates to: PTVLETLSIVGHSVNVSCSTVEL*KQYERS Trigger: ACTTCTCTCATATTGCTTTCACAATTCAACAGTGCT...GCAGGAAACATTTACACTGTGTCCTACAATGCTCAGTGTTTCTAGCACGGTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR GCA 90 bp | ACATATGATATACATGATCAGTTATGGCCTTTAGTGTGCAACTGTTTTCTTCAGGTGGGGCTGGAGAGATaGTCTGTGGTTAAGAGCACA | + |
Preference number: 2 (lower is better) Translates to: TYDIHDQLWPLVCNCFLQVGLER*SVVKST Trigger: TGTGCTCTTAACCACAGAGCATCTCTCCAGCCCCAC...CTGAAGAAAACAGTTGCACACTAAAGGCCATAACTGATCATGTATATCATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR CCA 90 bp | ACATATGATATACATGATCAGTTATGGCCTTTAGTGTGCAACTGTTTTCTTCAGAAAGTACGGTGGGGCTaGAGAGATGCTCTGTGGTTA | + |
Preference number: 2 (lower is better) Translates to: TYDIHDQLWPLVCNCFLQKVRWG*RDALWL Trigger: TAACCACAGAGCATCTCTCCAGCCCCACCGTACTTT...CTGAAGAAAACAGTTGCACACTAAAGGCCATAACTGATCATGTATATCATATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR CCA 90 bp | ACATATGATATACATGATCAGTTATGGCCTTTAGTGTGCAACTGTTTTCTTCAGATACGAAAAGTACGGTaGGGCTGGAGAGATGCTCTG | + |
Preference number: 2 (lower is better) Translates to: TYDIHDQLWPLVCNCFLQIRKVR*GWRDAL Trigger: CAGAGCATCTCTCCAGCCCCACCGTACTTTTCGTAT...CTGAAGAAAACAGTTGCACACTAAAGGCCATAACTGATCATGTATATCATATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR CCA 90 bp | TATTTTTCAAGATTGTCAAACGGTCAACTCTATCAGCATTGTAGAGTGCTGATAGTATCCAGCCTCTACTaGCCTCACCCTAGTTCTGAA | + |
Preference number: 2 (lower is better) Translates to: YFSRLSNGQLYQHCRVLIVSSLY*PHPSSE Trigger: TTCAGAACTAGGGTGAGGCCAGTAGAGGCTGGATAC...TATCAGCACTCTACAATGCTGATAGAGTTGACCGTTTGACAATCTTGAAAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR TCA 90 bp | TATTTTTCAAGATTGTCAAACGGTCAACTCTATCAGCATTGTAGAGTGCTGATAACAGTTCTTAATGTCTaGTCCCAGCGAGGGAACATC | + |
Preference number: 2 (lower is better) Translates to: YFSRLSNGQLYQHCRVLITVLNV*SQRGNI Trigger: GATGTTCCCTCGCTGGGATCAGACATTAAGAACTGT...TATCAGCACTCTACAATGCTGATAGAGTTGACCGTTTGACAATCTTGAAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR CCA 90 bp | ACATATGATATACATGATCAGTTATGGCCTTTAGTGTGCAACTGTTTTCTTCAGTGGAGAGATGCTCTGTaGTTAAGAGCACACACTGTT | + |
Preference number: 2 (lower is better) Translates to: TYDIHDQLWPLVCNCFLQWRDAL*LRAHTV Trigger: AACAGTGTGTGCTCTTAACCACAGAGCATCTCTCCA...CTGAAGAAAACAGTTGCACACTAAAGGCCATAACTGATCATGTATATCATATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR GCA 90 bp | CTGTTTTCTTCAGCACTGTTGAATTGTGAAAGCAATATGAGAGAAGTGTTCGTTAGAAAACAATGTTCTTaGATACGAAAAGTACGGTGG | + |
Preference number: 2 (lower is better) Translates to: LFSSALLNCESNMREVFVRKQCS*IRKVRW Trigger: CCACCGTACTTTTCGTATGCAAGAACATTGTTTTCT...AACGAACACTTCTCTCATATTGCTTTCACAATTCAACAGTGCTGAAGAAAACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR TCA 90 bp | ACATATGATATACATGATCAGTTATGGCCTTTAGTGTGCAACTGTTTTCTTCAGTGTCAAGAAGAGCTTTaGCTCAAGGTTAAAGTATTG | + |
Preference number: 2 (lower is better) Translates to: TYDIHDQLWPLVCNCFLQCQEEL*LKVKVL Trigger: CAATACTTTAACCTTGAGTCAAAGCTCTTCTTGACA...CTGAAGAAAACAGTTGCACACTAAAGGCCATAACTGATCATGTATATCATATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR CCA 90 bp | TATTTTTCAAGATTGTCAAACGGTCAACTCTATCAGCATTGTAGAGTGCTGATAGAGGTCAGTTCTCTGTaGATTTTAAATTGTGTTGGT | + |
Preference number: 2 (lower is better) Translates to: YFSRLSNGQLYQHCRVLIEVSSL*ILNCVG Trigger: ACCAACACAATTTAAAATCCACAGAGAACTGACCTC...TATCAGCACTCTACAATGCTGATAGAGTTGACCGTTTGACAATCTTGAAAAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR TCA 72 bp | TGGTGTTCAGTGGCTTTCTCCTTGGCATCCTGCCCGTaGAAGCCACAACACCCAGCTCCTCACAGATCTCTA | + |
Preference number: 3 (lower is better) Translates to: WCSVAFSLASCP*KPQHPAPHRSL Trigger: TAGAGATCTGTGAGGAGCTGGGTGTTGTGGCTTTCACGGGCAGGATGCCAAGGAGAAAGCCACTGAACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR TCA 72 bp | AGAGATGCTCTGTGGTTAAGAGCACACACTGTTCTTTaGGAGGACCTCAGTTCAGTTCTCAGTACCCACATG | + |
Preference number: 3 (lower is better) Translates to: RDALWLRAHTVL*EDLSSVLSTHM Trigger: CATGTGGGTACTGAGAACTGAACTGAGGTCCTCTCAAAGAACAGTGTGTGCTCTTAACCACAGAGCATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR TCA 72 bp | CTCACCCTAGTTCTGAAAGCTGAATCTGAACCCAGATaGTCCCTAGGAAACACCAGTAATAGCTCCAAAGGC | + |
Preference number: 3 (lower is better) Translates to: LTLVLKAESEPR*SLGNTSNSSKG Trigger: GCCTTTGGAGCTATTACTGGTGTTTCCTAGGGATCATCTGGGTTCAGATTCAGCTTTCAGAACTAGGGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR GCA 72 bp | TTCTTGCATACGAAAAGTACGGTGGGGCTGGAGAGATaGTCTGTGGTTAAGAGCACACACTGTTCTTTGAGA | + |
Preference number: 3 (lower is better) Translates to: FLHTKSTVGLER*SVVKSTHCSLR Trigger: TCTCAAAGAACAGTGTGTGCTCTTAACCACAGAGCATCTCTCCAGCCCCACCGTACTTTTCGTATGCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR CCA 72 bp | GATAGAAAACAATGTTCTTGCATACGAAAAGTACGGTaGGGCTGGAGAGATGCTCTGTGGTTAAGAGCACAC | + |
Preference number: 3 (lower is better) Translates to: DRKQCSCIRKVR*GWRDALWLRAH Trigger: GTGTGCTCTTAACCACAGAGCATCTCTCCAGCCCCACCGTACTTTTCGTATGCAAGAACATTGTTTTCTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR TCA 72 bp | GGGAAAATCATAGAGTCACTTCTCAGGGCTTGCAAATaGATATGTCCAGGCAGGACAACACTATATAGTCCT | + |
Preference number: 3 (lower is better) Translates to: GKIIESLLRACK*ICPGRTTLYSP Trigger: AGGACTATATAGTGTTGTCCTGCCTGGACATATTCATTTGCAAGCCCTGAGAAGTGACTCTATGATTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR CCA 72 bp | AAACTTGAAAATATGCAGCTTGTAGGGATAGCAGACTaGGAAAATCATAGAGTCACTTCTCAGGGCTTGCAA | + |
Preference number: 3 (lower is better) Translates to: KLENMQLVGIAD*ENHRVTSQGLQ Trigger: TTGCAAGCCCTGAGAAGTGACTCTATGATTTTCCCAGTCTGCTATCCCTACAAGCTGCATATTTTCAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR-3UTR CAA 90 bp | TATTTTTCAAGATTGTCAAACGGTCAACTCTATCAGCATTGTAGAGTGCTGATAAGCACACACTGTTCTTaGAGAGGACCTCAGTTCAGT | + |
Preference number: 3 (lower is better) Translates to: YFSRLSNGQLYQHCRVLISTHCS*RGPQFS Trigger: ACTGAACTGAGGTCCTCTCAAAGAACAGTGTGTGCT...TATCAGCACTCTACAATGCTGATAGAGTTGACCGTTTGACAATCTTGAAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR CCA 72 bp | AATGACAGTTTAACATATGATATACATGATCAGTTATaGCCTTTAGTGTGCAACTGTTTTCTTCAGCACTGT | + |
Preference number: 3 (lower is better) Translates to: NDSLTYDIHDQL*PLVCNCFLQHC Trigger: ACAGTGCTGAAGAAAACAGTTGCACACTAAAGGCCATAACTGATCATGTATATCATATGTTAAACTGTCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR CAA 72 bp | TCCCTTCTGCTAATCCCTCCAATGCCACCCCCAGCTTaGATCAAGATGCCAGTATCCAGCCTCTACTGGCCT | + |
Preference number: 4 (lower is better) Translates to: SLLLIPPMPPPA*IKMPVSSLYWP Trigger: AGGCCAGTAGAGGCTGGATACTGGCATCTTGATCAAAGCTGGGGGTGGCATTGGAGGGATTAGCAGAAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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CDS-3UTR CCA 90 bp | CCTACCGTGCTAGAAACACTGAGCATTGTAGGACACAGTGTAAATGTTTCCTGCCTTGTGTCCACACAGTaGCATCTGAAGGGTCCACGT | + |
Preference number: 4 (lower is better) Translates to: PTVLETLSIVGHSVNVSCLVSTQ*HLKGPR Trigger: ACGTGGACCCTTCAGATGCCACTGTGTGGACACAAG...GCAGGAAACATTTACACTGTGTCCTACAATGCTCAGTGTTTCTAGCACGGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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CDS-3UTR GCA 90 bp | TCTTTGAGAGGACCTCAGTTCAGTTCTCAGTACCCACATGGCCTCTCACAACTGACATGTAGATGGCAGTaGCATAGAAAAGGACCACCA | + |
Preference number: 4 (lower is better) Translates to: SLRGPQFSSQYPHGLSQLTCRWQ*HRKGPP Trigger: TGGTGGTCCTTTTCTATGGCACTGCCATCTACATGT...CAGTTGTGAGAGGCCATGTGGGTACTGAGAACTGAACTGAGGTCCTCTCAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR CAA 72 bp | GAGAGATGCTCTGTGGTTAAGAGCACACACTGTTCTTaGAGAGGACCTCAGTTCAGTTCTCAGTACCCACAT | + |
Preference number: 4 (lower is better) Translates to: ERCSVVKSTHCS*RGPQFSSQYPH Trigger: ATGTGGGTACTGAGAACTGAACTGAGGTCCTCTCAAAGAACAGTGTGTGCTCTTAACCACAGAGCATCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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3UTR CAA 72 bp | GCAGACTGGGAAAATCATAGAGTCACTTCTCAGGGCTaGCAAATGAATATGTCCAGGCAGGACAACACTATA | + |
Preference number: 4 (lower is better) Translates to: ADWENHRVTSQG*QMNMSRQDNTI Trigger: TATAGTGTTGTCCTGCCTGGACATATTCATTTGCAAGCCCTGAGAAGTGACTCTATGATTTTCCCAGTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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CDS-3UTR TCA 90 bp | TATTTTTCAAGATTGTCAAACGGTCAACTCTATCAGCATTGTAGAGTGCTGATACCAAGGCCAGGAAAATaGAAAGCTGGGCCACACAGC | + |
Preference number: 4 (lower is better) Translates to: YFSRLSNGQLYQHCRVLIPRPGK*KAGPHS Trigger: GCTGTGTGGCCCAGCTTTTCATTTTCCTGGCCTTGG...TATCAGCACTCTACAATGCTGATAGAGTTGACCGTTTGACAATCTTGAAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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CDS-3UTR CCA 90 bp | ACATATGATATACATGATCAGTTATGGCCTTTAGTGTGCAACTGTTTTCTTCAGCTTGGAAGTAGGGGATaGTGGCTGCAGATACATGTA | + |
Preference number: 4 (lower is better) Translates to: TYDIHDQLWPLVCNCFLQLGSRG*WLQIHV Trigger: TACATGTATCTGCAGCCACCATCCCCTACTTCCAAG...CTGAAGAAAACAGTTGCACACTAAAGGCCATAACTGATCATGTATATCATATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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CDS-3UTR GCA 90 bp | TATTTTTCAAGATTGTCAAACGGTCAACTCTATCAGCATTGTAGAGTGCTGATAGATGAAGAACAGCTCTaGTTCATTAGCTGTCGTATC | + |
Preference number: 4 (lower is better) Translates to: YFSRLSNGQLYQHCRVLIDEEQL*FISCRI Trigger: GATACGACAGCTAATGAAGCAGAGCTGTTCTTCATC...TATCAGCACTCTACAATGCTGATAGAGTTGACCGTTTGACAATCTTGAAAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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CDS-3UTR CAA 90 bp | TCTTTGAGAGGACCTCAGTTCAGTTCTCAGTACCCACATGGCCTCTCACAACTGATGGGGGTGTGGAGTTaGGAATCCAGGCGGGACACA | + |
Preference number: 5 (lower is better) Translates to: SLRGPQFSSQYPHGLSQLMGVWS*ESRRDT Trigger: TGTGTCCCGCCTGGATTCCAAACTCCACACCCCCAT...CAGTTGTGAGAGGCCATGTGGGTACTGAGAACTGAACTGAGGTCCTCTCAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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CDS-3UTR CAA 90 bp | CCTACCGTGCTAGAAACACTGAGCATTGTAGGACACAGTGTAAATGTTTCCTGCCGGGTGCTGCAGATGTaGATGAGCATCTGTGGGACC | + |
Preference number: 5 (lower is better) Translates to: PTVLETLSIVGHSVNVSCRVLQM*MSICGT Trigger: GGTCCCACAGATGCTCATCAACATCTGCAGCACCCG...GCAGGAAACATTTACACTGTGTCCTACAATGCTCAGTGTTTCTAGCACGGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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CDS-3UTR CAA 90 bp | TATTTTTCAAGATTGTCAAACGGTCAACTCTATCAGCATTGTAGAGTGCTGATACTTGTCACCAACCTCTaGAACGCTCCCTTTACCTCT | + |
Preference number: 5 (lower is better) Translates to: YFSRLSNGQLYQHCRVLILVTNL*NAPFTS Trigger: AGAGGTAAAGGGAGCGTTCAAGAGGTTGGTGACAAG...TATCAGCACTCTACAATGCTGATAGAGTTGACCGTTTGACAATCTTGAAAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |
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CDS-3UTR CAA 90 bp | CTGTTTTCTTCAGCACTGTTGAATTGTGAAAGCAATATGAGAGAAGTGTTCGTTGACTGTAATACTGAGTaGCTGAAGCCACTGATCCAA | + |
Preference number: 5 (lower is better) Translates to: LFSSALLNCESNMREVFVDCNTE*LKPLIQ Trigger: TTGGATCAGTGGCTTCAGCAACTCAGTATTACAGTC...AACGAACACTTCTCTCATATTGCTTTCACAATTCAACAGTGCTGAAGAAAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214435.2 |