Pregenerated sensors for OLFR1357 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071185Ensembl transcript IDs: ENSMUST00000095473.6, ENSMUST00000203305.3, ENSMUST00000205085.2, ENSMUST00000213877.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCAAAATTCCCAACCAGGTGGTaGACAACTGTCATCCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: SGWVRPPIGGKQFQEQAKFPTRW*TTVILA Trigger: TGCTAGGATGACAGTTGTGCACCACCTGGTTGGGAA...TTTTGCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| 3UTR-3UTR GCA 90 bp | CCCATATCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGTTTAAGCATGGTATTTaGAAGTCATTAACTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: PISGWVRPPIGGKQFQEQFKHGI*KSLTLP Trigger: GGGAAGAGTTAATGACTTGCAAATACCATGCTTAAA...CTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGATATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACTGTCATCCTAGCACTCAGGAGGCTGAAACACCAAACTCAGCTCCTCTGTTCATCTATTCCTTTGTaGCACATTTACCACACTCTA | + |
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Preference number: 2 (lower is better) Translates to: TTVILALRRLKHQTQLLCSSIPL*HIYHTL Trigger: TAGAGTGTGGTAAATGTGTCACAAAGGAATAGATGA...ACAGAGGAGCTGAGTTTGGTGTTTCAGCCTCCTGAGTGCTAGGATGACAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGAGGCTGAAACACCAAACTCAGCTCCTCTGTAAGATCACCAAGTACTTTTCATCTATTCCTTTGTaGCACATTTACCACACTCTA | + |
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Preference number: 2 (lower is better) Translates to: LRRLKHQTQLLCKITKYFSSIPL*HIYHTL Trigger: TAGAGTGTGGTAAATGTGTCACAAAGGAATAGATGA...AAAGTACTTGGTGATCTTACAGAGGAGCTGAGTTTGGTGTTTCAGCCTCCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR GCA 90 bp | CATATCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCATGAGACTGCTTTGCTaGCAAGCTTCCTCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HIRVGEASHRRKAVPRAGMRLLC*QASSGL Trigger: CAGCCCTGAGGAAGCTTGGCAGCAAAGCAGTCTCAT...GCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGATATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CCA 90 bp | CCCATATCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGAAGGATGCAGGACAGTaGGCTGAGGCCCATGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: PISGWVRPPIGGKQFQEQKDAGQ*AEAHDN Trigger: ATTGTCATGGGCCTCAGCCCACTGTCCTGCATCCTT...CTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGATATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CCA 90 bp | CATATCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCCTTTCTGGGAGGAGCTaGGGGATGCTGGCAGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: HIRVGEASHRRKAVPRAGLSGRS*GMLAVN Trigger: ATTTACTGCCAGCATCCCCCAGCTCCTCCCAGAAAG...GCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGATATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR TCA 90 bp | CATATCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCATGGGTGTGTGCAGGTaGGAGTCTGATATGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HIRVGEASHRRKAVPRAGMGVCR*ESDMMA Trigger: AGCCATCATATCAGACTCTCACCTGCACACACCCAT...GCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR TCA 90 bp | ACAACTGTCATCCTAGCACTCAGGAGGCTGAAACACCAAACTCAGCTCCTCTGTTGGGCTCATGAGCACTaGGTAGCGGAGTGGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: TTVILALRRLKHQTQLLCWAHEH*VAEWVG Trigger: GCCTACCCACTCCGCTACTCAGTGCTCATGAGCCCA...ACAGAGGAGCTGAGTTTGGTGTTTCAGCCTCCTGAGTGCTAGGATGACAGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR GCA 90 bp | ATATCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCAAGAAGGCTTTCCACTTaGCCTGAGCAGAAGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ISGWVRPPIGGKQFQEQARRLST*PEQKGS Trigger: GGATCCCTTCTGCTCAGGGCAAGTGGAAAGCCTTCT...TGCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR GCA 90 bp | CATATCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCGTCAATGGCCATCACTaGCAGAAGGAAGCTGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HIRVGEASHRRKAVPRAGVNGHH*QKEAVY Trigger: ATAGACAGCTTCCTTCTGGCAGTGATGGCCATTGAC...GCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR TCA 90 bp | TCACCTCTGTATCCCAAGCACCTAGCAGTAGTCTTAAAAATCAGTGGCCACACATGGGCTCATGAGCACTaGGTAGCGGAGTGGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: SPLYPKHLAVVLKISGHTWAHEH*VAEWVG Trigger: GCCTACCCACTCCGCTACTCAGTGCTCATGAGCCCA...TGTGTGGCCACTGATTTTTAAGACTACTGCTAGGTGCTTGGGATACAGAGGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR TCA 90 bp | TCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCAAAAGCACAGAAGGTTAGTTaGGCCATGAGACAAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGWVRPPIGGKQFQEQAKAQKVS*AMRQVC Trigger: ACACACTTGTCTCATGGCTCAACTAACCTTCTGTGC...TTTTGCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR TCA 90 bp | ATATCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCAAGGTCACAGAAGAAGTaGGGGATTTCTGATCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISGWVRPPIGGKQFQEQARSQKK*GISDLA Trigger: TGCAAGATCAGAAATCCCTCACTTCTTCTGTGACCT...TGCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR GCA 90 bp | CATATCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCAGGGATCCTGAAAACTaGCCTGAAAATGCAGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: HIRVGEASHRRKAVPRAGRDPEN*PENADV Trigger: TACATCTGCATTTTCAGGGCAGTTTTCAGGATCCCT...GCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR GCA 90 bp | ACAACTGTCATCCTAGCACTCAGGAGGCTGAAACACCAAACTCAGCTCCTCTGTAGAAGGCTTTCCACTTaGCCTGAGCAGAAGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TTVILALRRLKHQTQLLCRRLST*PEQKGS Trigger: GGATCCCTTCTGCTCAGGGCAAGTGGAAAGCCTTCT...ACAGAGGAGCTGAGTTTGGTGTTTCAGCCTCCTGAGTGCTAGGATGACAGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CCA 90 bp | TGGGGTTCACCTCTGTATCCCAAGCACCTAGCAGTAGTCTTAAAAATCAGTGGCAAGGATGCAGGACAGTaGGCTGAGGCCCATGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: WGSPLYPKHLAVVLKISGKDAGQ*AEAHDN Trigger: ATTGTCATGGGCCTCAGCCCACTGTCCTGCATCCTT...GCCACTGATTTTTAAGACTACTGCTAGGTGCTTGGGATACAGAGGTGAACCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR TCA 90 bp | AGGTGGTGCACAACTGTCATCCTAGCACTCAGGAGGCTGAAACACCAAACTCAGAGGTCACAGAAGAAGTaGGGGATTTCTGATCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RWCTTVILALRRLKHQTQRSQKK*GISDLA Trigger: TGCAAGATCAGAAATCCCTCACTTCTTCTGTGACCT...CTGAGTTTGGTGTTTCAGCCTCCTGAGTGCTAGGATGACAGTTGTGCACCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR GCA 90 bp | ACAACTGTCATCCTAGCACTCAGGAGGCTGAAACACCAAACTCAGCTCCTCTGTGTCAATGGCCATCACTaGCAGAAGGAAGCTGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TTVILALRRLKHQTQLLCVNGHH*QKEAVY Trigger: ATAGACAGCTTCCTTCTGGCAGTGATGGCCATTGAC...ACAGAGGAGCTGAGTTTGGTGTTTCAGCCTCCTGAGTGCTAGGATGACAGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR GCA 90 bp | TTGGGGTTCACCTCTGTATCCCAAGCACCTAGCAGTAGTCTTAAAAATCAGTGGAGAAGGCTTTCCACTTaGCCTGAGCAGAAGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGFTSVSQAPSSSLKNQWRRLST*PEQKGS Trigger: GGATCCCTTCTGCTCAGGGCAAGTGGAAAGCCTTCT...CCACTGATTTTTAAGACTACTGCTAGGTGCTTGGGATACAGAGGTGAACCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR GCA 90 bp | TTGGGGTTCACCTCTGTATCCCAAGCACCTAGCAGTAGTCTTAAAAATCAGTGGATGAGACTGCTTTGCTaGCAAGCTTCCTCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LGFTSVSQAPSSSLKNQWMRLLC*QASSGL Trigger: CAGCCCTGAGGAAGCTTGGCAGCAAAGCAGTCTCAT...CCACTGATTTTTAAGACTACTGCTAGGTGCTTGGGATACAGAGGTGAACCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR TCA 90 bp | TGGGGTTCACCTCTGTATCCCAAGCACCTAGCAGTAGTCTTAAAAATCAGTGGCGCACAGAAGGTTAGTTaGGCCATGAGACAAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WGSPLYPKHLAVVLKISGAQKVS*AMRQVC Trigger: ACACACTTGTCTCATGGCTCAACTAACCTTCTGTGC...GCCACTGATTTTTAAGACTACTGCTAGGTGCTTGGGATACAGAGGTGAACCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR GCA 90 bp | AGGTGGTGCACAACTGTCATCCTAGCACTCAGGAGGCTGAAACACCAAACTCAGAGGGATCCTGAAAACTaGCCTGAAAATGCAGATGTA | + |
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Preference number: 4 (lower is better) Translates to: RWCTTVILALRRLKHQTQRDPEN*PENADV Trigger: TACATCTGCATTTTCAGGGCAGTTTTCAGGATCCCT...CTGAGTTTGGTGTTTCAGCCTCCTGAGTGCTAGGATGACAGTTGTGCACCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR GCA 90 bp | AACAACCAACCAACCAACCAACCAACCAACCAACCAATCATAAACTTTCCCAACATGAGACTGCTTTGCTaGCAAGCTTCCTCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NNQPTNQPTNQPIINFPNMRLLC*QASSGL Trigger: CAGCCCTGAGGAAGCTTGGCAGCAAAGCAGTCTCAT...GTTGGGAAAGTTTATGATTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR GCA 90 bp | AGTAAACAACCAACCAACCAACCAACCAACCAACCAACCAATCATAAACTTTCCGTCAATGGCCATCACTaGCAGAAGGAAGCTGTCTAT | + |
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Preference number: 4 (lower is better) Translates to: SKQPTNQPTNQPTNHKLSVNGHH*QKEAVY Trigger: ATAGACAGCTTCCTTCTGGCAGTGATGGCCATTGAC...GGAAAGTTTATGATTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGTTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CCA 90 bp | TCACCTCTGTATCCCAAGCACCTAGCAGTAGTCTTAAAAATCAGTGGCCACACAGTGTGTACCAAGGACTaGAGATTAGTAATAACCCAT | + |
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Preference number: 4 (lower is better) Translates to: SPLYPKHLAVVLKISGHTVCTKD*RLVITH Trigger: ATGGGTTATTACTAATCTCCAGTCCTTGGTACACAC...TGTGTGGCCACTGATTTTTAAGACTACTGCTAGGTGCTTGGGATACAGAGGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CCA 90 bp | CTCAGGAGGCTGAAACACCAAACTCAGCTCCTCTGTAAGATCACCAAGTACTTTGTGTGTACCAAGGACTaGAGATTAGTAATAACCCAT | + |
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Preference number: 4 (lower is better) Translates to: LRRLKHQTQLLCKITKYFVCTKD*RLVITH Trigger: ATGGGTTATTACTAATCTCCAGTCCTTGGTACACAC...AAAGTACTTGGTGATCTTACAGAGGAGCTGAGTTTGGTGTTTCAGCCTCCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR TCA 90 bp | AGTAAACAACCAACCAACCAACCAACCAACCAACCAACCAATCATAAACTTTCCAGGTCACAGAAGAAGTaGGGGATTTCTGATCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: SKQPTNQPTNQPTNHKLSRSQKK*GISDLA Trigger: TGCAAGATCAGAAATCCCTCACTTCTTCTGTGACCT...GGAAAGTTTATGATTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR TCA 90 bp | TCTGTAAGATCACCAAGTACTTTTAAACCCAGCTACAGAAATCATCTATTCCTTATGGGTGTGTGCAGGTaGGAGTCTGATATGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: SVRSPSTFKPSYRNHLFLMGVCR*ESDMMA Trigger: AGCCATCATATCAGACTCTCACCTGCACACACCCAT...AAGGAATAGATGATTTCTGTAGCTGGGTTTAAAAGTACTTGGTGATCTTACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR TCA 90 bp | ACTTTTAAACCCAGCTACAGAAATCATCTATTCCTTTGTGACACATTTACCACAATGGGTGTGTGCAGGTaGGAGTCTGATATGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: TFKPSYRNHLFLCDTFTTMGVCR*ESDMMA Trigger: AGCCATCATATCAGACTCTCACCTGCACACACCCAT...TGTGGTAAATGTGTCACAAAGGAATAGATGATTTCTGTAGCTGGGTTTAAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR TCA 90 bp | TCTGTAAGATCACCAAGTACTTTTAAACCCAGCTACAGAAATCATCTATTCCTTGCACAGAAGGTTAGTTaGGCCATGAGACAAGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SVRSPSTFKPSYRNHLFLAQKVS*AMRQVC Trigger: ACACACTTGTCTCATGGCTCAACTAACCTTCTGTGC...AAGGAATAGATGATTTCTGTAGCTGGGTTTAAAAGTACTTGGTGATCTTACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| 3UTR CAA 72 bp | TATGGTGAATTAGGTTTTATTAGGTTGTTCTATTCCTaGCTAGACTTTGTACAACTTGGGGTTCACCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: YGELGFIRLFYS*LDFVQLGVHLC Trigger: ACAGAGGTGAACCCCAAGTTGTACAAAGTCTAGCAAGGAATAGAACAACCTAATAAAACCTAATTCACCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CAA 90 bp | CATATCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCTGGAATGAGACTGCTTaGCTGCCAAGCTTCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: HIRVGEASHRRKAVPRAGWNETA*LPSFLR Trigger: CCTGAGGAAGCTTGGCAGCAAAGCAGTCTCATTCCA...GCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGATATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CAA 90 bp | TCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCAAAAATTAACGCAGCTGCCTaGTCTTTCTGGGAGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SGWVRPPIGGKQFQEQAKINAAA*SFWEEL Trigger: CAGCTCCTCCCAGAAAGACAAGGCAGCTGCGTTAAT...TTTTGCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CAA 90 bp | ATATCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCATGGAATGAGACTGCTTaGCTGCCAAGCTTCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: ISGWVRPPIGGKQFQEQAWNETA*LPSFLR Trigger: CCTGAGGAAGCTTGGCAGCAAAGCAGTCTCATTCCA...TGCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CAA 90 bp | ATATCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCAGGAATTCCAAGACTGTaGTTTGGTTTTCTGGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: ISGWVRPPIGGKQFQEQAGIPRL*FGFLVP Trigger: TGGCACCAGAAAACCAAACAACAGTCTTGGAATTCC...TGCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CAA 90 bp | TCAGGGTGGGTGAGGCCTCCCATAGGAGGAAAGCAGTTCCAAGAGCAGGCAAAAGGAATTCCAAGACTGTaGTTTGGTTTTCTGGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: SGWVRPPIGGKQFQEQAKGIPRL*FGFLVP Trigger: TGGCACCAGAAAACCAAACAACAGTCTTGGAATTCC...TTTTGCCTGCTCTTGGAACTGCTTTCCTCCTATGGGAGGCCTCACCCACCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS CCA 90 bp | GTAGGGATAACCACCCCAAACATTAACGCAGCTGCCTTGTCTTTCTaGGAGGAGCTGGGGGATGCTGGCAGTAAATATCCAGTAAAGATG | + |
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Preference number: 5 (lower is better) Translates to: VGITTPNINAAALSF*EELGDAGSKYPVKM Trigger: CATCTTTACTGGATATTTACTGCCAGCATCCCCCAGCTCCTCCCAGAAAGACAAGGCAGCTGCGTTAATGTTTGGGGTGGTTATCCCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000205085.2 ENSMUST00000213877.2 |
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| CDS-3UTR CAA 90 bp | CTCAGGAGGCTGAAACACCAAACTCAGCTCCTCTGTAAGATCACCAAGTACTTTATTAACGCAGCTGCCTaGTCTTTCTGGGAGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LRRLKHQTQLLCKITKYFINAAA*SFWEEL Trigger: CAGCTCCTCCCAGAAAGACAAGGCAGCTGCGTTAAT...AAAGTACTTGGTGATCTTACAGAGGAGCTGAGTTTGGTGTTTCAGCCTCCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CAA 90 bp | AACAACCAACCAACCAACCAACCAACCAACCAACCAATCATAAACTTTCCCAACAAGATCACCAGCTCATaGATGTGTGTATCTGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: NNQPTNQPTNQPIINFPNKITSS*MCVSEQ Trigger: CTGCTCAGATACACACATCAATGAGCTGGTGATCTT...GTTGGGAAAGTTTATGATTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CAA 90 bp | AGTAAACAACCAACCAACCAACCAACCAACCAACCAACCAATCATAAACTTTCCGGAATTCCAAGACTGTaGTTTGGTTTTCTGGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: SKQPTNQPTNQPTNHKLSGIPRL*FGFLVP Trigger: TGGCACCAGAAAACCAAACAACAGTCTTGGAATTCC...GGAAAGTTTATGATTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CAA 90 bp | TCTGTAAGATCACCAAGTACTTTTAAACCCAGCTACAGAAATCATCTATTCCTTATTAACGCAGCTGCCTaGTCTTTCTGGGAGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SVRSPSTFKPSYRNHLFLINAAA*SFWEEL Trigger: CAGCTCCTCCCAGAAAGACAAGGCAGCTGCGTTAAT...AAGGAATAGATGATTTCTGTAGCTGGGTTTAAAAGTACTTGGTGATCTTACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS-3UTR CAA 90 bp | TCTGTAAGATCACCAAGTACTTTTAAACCCAGCTACAGAAATCATCTATTCCTTAAGATCACCAGCTCATaGATGTGTGTATCTGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: SVRSPSTFKPSYRNHLFLKITSS*MCVSEQ Trigger: CTGCTCAGATACACACATCAATGAGCTGGTGATCTT...AAGGAATAGATGATTTCTGTAGCTGGGTTTAAAAGTACTTGGTGATCTTACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000213877.2 |
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| CDS CAA 90 bp | CAGAAGGAAGCTGTCTATAGTCCCAAAGAGGTGAAAGGCATACATTaGGACAAGACAGCCTGTGAAAGAGATAGCTCTGCTCTGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: QKEAVYSPKEVKGIH*DKTACERDSSALGL Trigger: CAGACCCAGAGCAGAGCTATCTCTTTCACAGGCTGTCTTGTCCAAATGTATGCCTTTCACCTCTTTGGGACTATAGACAGCTTCCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095473.6 ENSMUST00000203305.3 ENSMUST00000205085.2 ENSMUST00000213877.2 |
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