Pregenerated sensors for OLFR1356 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051190Ensembl transcript IDs: ENSMUST00000205100.3
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGCAATGGTGTCAGCGTTTGGAAGCTGATTATGGGGTGGATCCCTaGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: MQWCQRLEADYGVDP*IWQSLDGPSFCLSS Trigger: AGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCACCCCATAATCAGCTTCCAAACGCTGACACCATTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR GCA 90 bp | ACCTGGAAATTTCACATCAGAAGAGGTTCTAGTGGCCACACATCCTaGTCCCCAACTTTTCCTCTGTTTCCTGCCTGGAAATCAGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: TWKFHIRRGSSGHTS*SPTFPLFPAWKSES Trigger: GCTTTCTGATTTCCAGGCAGGAAACAGAGGAAAAGTTGGGGAGCAGGATGTGTGGCCACTAGAACCTCTTCTGATGTGAAATTTCCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CCA 90 bp | TGGTGTCAGCGTTTGGAAGCTGATTATGGGGTGGATCCCTGGATATaGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCTAAACTT | + |
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Preference number: 1 (lower is better) Translates to: WCQRLEADYGVDPWI*QSLDGPSFCLSSKL Trigger: AAGTTTAGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCACCCCATAATCAGCTTCCAAACGCTGACACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CCA 90 bp | CATAATGTTGTTCCACCTATAGAGTTGCAGATCCCTTTAGCTCCTTaGGTACTTTCTCTAGCTCCTCCACTGGGAGCCCTGAGATCTATC | + |
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Preference number: 1 (lower is better) Translates to: HNVVPPIELQIPLAP*VLSLAPPLGALRSI Trigger: GATAGATCTCAGGGCTCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACTCTATAGGTGGAACAACATTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CCA 90 bp | AGAATCTTTCAGGATGTTGTGTTAAAGGACCTAGAATCTGCAACATaGACCATAACAACTCATCAGAGCTACTGCCATGCTGTCTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: RIFQDVVLKDLESAT*TITTHQSYCHAVCL Trigger: GAGACAGACAGCATGGCAGTAGCTCTGATGAGTTGTTATGGTCCATGTTGCAGATTCTAGGTCCTTTAACACAACATCCTGAAAGATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CCA 90 bp | ATTACAAAGTTGGTAATTTTGGAGGAATCCTGTTGTCCCATCCCTTaGTTCCCATATTTCTATATTTGTGTTCCAGAATGGAGGGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: ITKLVILEESCCPIP*FPYFYICVPEWRGK Trigger: TTTTCCCCTCCATTCTGGAACACAAATATAGAAATATGGGAACCAAGGGATGGGACAACAGGATTCCTCCAAAATTACCAACTTTGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR GCA 90 bp | CTAGGCCCCGGCATAGTGTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAATCAGAGCTACTGCCATaGTGTCTGTCTCTGGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: LGPGIVSQETAISGSFQQSELLP*CLSLVL Trigger: TAGCACCAGAGACAGACAGCATGGCAGTAGCTCTGA...TTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTGACACTATGCCGGGGCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR GCA 90 bp | CTAGGCCCCGGCATAGTGTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAACTCATCAGAGCTACTaGCATGCTGTCTGTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LGPGIVSQETAISGSFQQTHQSY*HAVCLW Trigger: CCAGAGACAGACAGCATGGCAGTAGCTCTGATGAGT...TTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTGACACTATGCCGGGGCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR CCA 90 bp | TATAGAGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTCCTCTGTTTCCTGCCTaGAAATCAGAAAGCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: YRVADPFSSLGTFSSSSTPLFPA*KSESLG Trigger: ACCCAGGCTTTCTGATTTCCAGGCAGGAAACAGAGG...AGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACTCTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR GCA 90 bp | CTAGGCCCCGGCATAGTGTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAAAGGACCTAGAATCTaGAACATGGACCATAACAAC | + |
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Preference number: 2 (lower is better) Translates to: LGPGIVSQETAISGSFQQKGPRI*NMDHNN Trigger: GTTGTTATGGTCCATGTTGCAGATTCTAGGTCCTTT...TTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTGACACTATGCCGGGGCCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAGAGCCATTCTTCTTCAGGCATGTGGTTGCTGGTAGGTTGCCCATGTTCCTAGAATCTGCAACATaGACCATAACAACTCATCAG | + |
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Preference number: 2 (lower is better) Translates to: AREPFFFRHVVAGRLPMFLESAT*TITTHQ Trigger: CTGATGAGTTGTTATGGTCCATGTTGCAGATTCTAG...GAACATGGGCAACCTACCAGCAACCACATGCCTGAAGAAGAATGGCTCTCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR CCA 90 bp | CTAGGCCCCGGCATAGTGTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAATTTGTGTTCCAGAATaGAGGGGAAAAGGAATCATG | + |
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Preference number: 2 (lower is better) Translates to: LGPGIVSQETAISGSFQQICVPE*RGKGIM Trigger: CATGATTCCTTTTCCCCTCCATTCTGGAACACAAAT...TTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTGACACTATGCCGGGGCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGTCATTACAAAGTTGGTAATTTTGGAGGAATCCTGTTGTCCCATCCCTTGGAGTGGCCACACATCCTaGTCCCCAACTTTTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FVITKLVILEESCCPIPWSGHTS*SPTFPL Trigger: CAGAGGAAAAGTTGGGGAGCAGGATGTGTGGCCACT...CCAAGGGATGGGACAACAGGATTCCTCCAAAATTACCAACTTTGTAATGACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR GCA 90 bp | GCAAGAGAGCCATTCTTCTTCAGGCATGTGGTTGCTGGTAGGTTGCCCATGTTCTCTGTACTAGATTGTTaGTTAAGGTTTCAATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: AREPFFFRHVVAGRLPMFSVLDC*LRFQFL Trigger: CAGGAATTGAAACCTTAAGCAACAATCTAGTACAGA...GAACATGGGCAACCTACCAGCAACCACATGCCTGAAGAAGAATGGCTCTCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CAA 90 bp | ATGATACTGGAAGCAGGTCACATTGGTGGGAGATTGGAGGAAAGTTaGAATAATAAAAGGTGTGTGAGTGTGTGTGTACGTGTTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: MILEAGHIGGRLEES*NNKRCVSVCVRVCV Trigger: CACACAAACACGTACACACACACTCACACACCTTTTATTATTCAAACTTTCCTCCAATCTCCCACCAATGTGACCTGCTTCCAGTATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR TCA 90 bp | CTAGATGGTCCATCCTTTTGTCTCAGCTCTAAACTTTGTCTCTGTAACTCCTTTAAAAAGGAGTGGAGATaGTACTGGAAGCAGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: LDGPSFCLSSKLCLCNSFKKEWR*YWKQVT Trigger: TGTGACCTGCTTCCAGTATCATCTCCACTCCTTTTT...AAAGGAGTTACAGAGACAAAGTTTAGAGCTGAGACAAAAGGATGGACCATCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGTCATTACAAAGTTGGTAATTTTGGAGGAATCCTGTTGTCCCATCCCTTGGATCAGAAAGCCTGGGTaGAGACTGTGCTGTAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: FVITKLVILEESCCPIPWIRKPG*RLCCKY Trigger: ATACTTACAGCACAGTCTGCACCCAGGCTTTCTGAT...CCAAGGGATGGGACAACAGGATTCCTCCAAAATTACCAACTTTGTAATGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR CCA 90 bp | TATAGAGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTTGTTGTCCCATCCCTTaGTTCCCATATTTCTATATT | + |
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Preference number: 2 (lower is better) Translates to: YRVADPFSSLGTFSSSSTCCPIP*FPYFYI Trigger: AATATAGAAATATGGGAACCAAGGGATGGGACAACA...AGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACTCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CAA 90 bp | CATTACAAAGTTGGTAATTTTGGAGGAATCCTGTTGTCCCATCCCTaGGTTCCCATATTTCTATATTTGTGTTCCAGAATGGAGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: HYKVGNFGGILLSHP*VPIFLYLCSRMEGK Trigger: TTTCCCCTCCATTCTGGAACACAAATATAGAAATATGGGAACCAAGGGATGGGACAACAGGATTCCTCCAAAATTACCAACTTTGTAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CAA 90 bp | ATTGGAATTTGTCATTACAAAGTTGGTAATTTTGGAGGAATCCTGTaGTCCCATCCCTTGGTTCCCATATTTCTATATTTGTGTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: IGICHYKVGNFGGIL*SHPLVPIFLYLCSR Trigger: TCTGGAACACAAATATAGAAATATGGGAACCAAGGGATGGGACAACAGGATTCCTCCAAAATTACCAACTTTGTAATGACAAATTCCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR CAA 90 bp | GGGGTGGATCCCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTTTGGAGGAATCCTGTaGTCCCATCCCTTGGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: GVDPWIWQSLDGPSFCLSFGGIL*SHPLVP Trigger: GGGAACCAAGGGATGGGACAACAGGATTCCTCCAAA...GCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR CAA 90 bp | CTAGGCCCCGGCATAGTGTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAATCTTCAGGCATGTGGTaGCTGGTAGGTTGCCCATGT | + |
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Preference number: 3 (lower is better) Translates to: LGPGIVSQETAISGSFQQSSGMW*LVGCPC Trigger: ACATGGGCAACCTACCAGCAACCACATGCCTGAAGA...TTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTGACACTATGCCGGGGCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR GCA 72 bp | AACATGGACCATAACAACTCATCAGAGCTACTGCCATaGTGTCTGTCTCTGGTGCTAGGGCTTGTGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: NMDHNNSSELLP*CLSLVLGLVLF Trigger: GAAGAGCACAAGCCCTAGCACCAGAGACAGACAGCATGGCAGTAGCTCTGATGAGTTGTTATGGTCCATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CCA 72 bp | AAGTTTGCCTGTCCAATGGGCCTCTCTTTCCAGCGATaGCCGACTAGGCCATCTTTTGATACATATGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: KFACPMGLSFQR*PTRPSFDTYAA Trigger: AGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCGCTGGAAAGAGAGGCCCATTGGACAGGCAAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR CAA 90 bp | CTAGGCCCCGGCATAGTGTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAACCCTTCATCAGAGTGTaGAAGGACCTAGAATCTTTC | + |
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Preference number: 3 (lower is better) Translates to: LGPGIVSQETAISGSFQQPFIRV*KDLESF Trigger: GAAAGATTCTAGGTCCTTCAACACTCTGATGAAGGG...TTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTGACACTATGCCGGGGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR GCA 72 bp | TCCTGCCTGGAAATCAGAAAGCCTGGGTGCAGACTGTaGTGTAAGTATACCCTTCATCAGAGTGTTGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: SCLEIRKPGCRL*CKYTLHQSVEG Trigger: TCCTTCAACACTCTGATGAAGGGTATACTTACAGCACAGTCTGCACCCAGGCTTTCTGATTTCCAGGCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR GCA 72 bp | TTTCACATCAGAAGAGGTTCTAGTGGCCACACATCCTaGTCCCCAACTTTTCCTCTGTTTCCTGCCTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: FHIRRGSSGHTS*SPTFPLFPAWK Trigger: TTTCCAGGCAGGAAACAGAGGAAAAGTTGGGGAGCAGGATGTGTGGCCACTAGAACCTCTTCTGATGTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CCA 72 bp | TGTCAGCGTTTGGAAGCTGATTATGGGGTGGATCCCTaGATATGGCAGTCTCTAGATGGTCCATCCTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: CQRLEADYGVDP*IWQSLDGPSFC Trigger: ACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCACCCCATAATCAGCTTCCAAACGCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR CAA 90 bp | TGTTTGCTAGGCCCCGGCATAGTGTCACAAGAGACAGCTATATCTGGGTCCTTTACAAAGTTGGTAATTTaGGAGGAATCCTGTTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: CLLGPGIVSQETAISGSFTKLVI*EESCCP Trigger: GGGACAACAGGATTCCTCCAAAATTACCAACTTTGT...AAAGGACCCAGATATAGCTGTCTCTTGTGACACTATGCCGGGGCCTAGCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CCA 72 bp | CAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTaGAAGCTGATTATGGGGTGGATCCCTGGATATGGC | + |
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Preference number: 3 (lower is better) Translates to: QNLASVCNGVSV*KLIMGWIPGYG Trigger: GCCATATCCAGGGATCCACCCCATAATCAGCTTCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CCA 72 bp | CAGGATGTTGTGTTAAAGGACCTAGAATCTGCAACATaGACCATAACAACTCATCAGAGCTACTGCCATGCT | + |
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Preference number: 3 (lower is better) Translates to: QDVVLKDLESAT*TITTHQSYCHA Trigger: AGCATGGCAGTAGCTCTGATGAGTTGTTATGGTCCATGTTGCAGATTCTAGGTCCTTTAACACAACATCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR TCA 72 bp | CCTACTGAGGACATTTCCTATGAATCACGAGCTAACTaGTTTCCAGGTAGAAGTCTACCTGGAAATTTCACA | + |
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Preference number: 3 (lower is better) Translates to: PTEDISYESRAN*FPGRSLPGNFT Trigger: TGTGAAATTTCCAGGTAGACTTCTACCTGGAAATCAGTTAGCTCGTGATTCATAGGAAATGTCCTCAGTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR-3UTR CAA 90 bp | CTAGATGGTCCATCCTTTTGTCTCAGCTCTAAACTTTGTCTCTGTAACTCCTTTCCCATATTTCTATATTaGTGTTCCAGAATGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: LDGPSFCLSSKLCLCNSFPIFLY*CSRMEG Trigger: CCCCTCCATTCTGGAACACAAATATAGAAATATGGG...AAAGGAGTTACAGAGACAAAGTTTAGAGCTGAGACAAAAGGATGGACCATCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR GCA 72 bp | AATCTTTCAGGATGTTGTGTTAAAGGACCTAGAATCTaGAACATGGACCATAACAACTCATCAGAGCTACTG | + |
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Preference number: 3 (lower is better) Translates to: NLSGCCVKGPRI*NMDHNNSSELL Trigger: CAGTAGCTCTGATGAGTTGTTATGGTCCATGTTGCAGATTCTAGGTCCTTTAACACAACATCCTGAAAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CCA 72 bp | TTGGTAATTTTGGAGGAATCCTGTTGTCCCATCCCTTaGTTCCCATATTTCTATATTTGTGTTCCAGAATGG | + |
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Preference number: 3 (lower is better) Translates to: LVILEESCCPIP*FPYFYICVPEW Trigger: CCATTCTGGAACACAAATATAGAAATATGGGAACCAAGGGATGGGACAACAGGATTCCTCCAAAATTACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR GCA 72 bp | TATAGGAATATAGTTTCAGAATCTGTACTAGATTGTTaGTTAAGGTTTCAATTCCTGAAGGAGCCCTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: YRNIVSESVLDC*LRFQFLKEPFS Trigger: AGAAAAGGGCTCCTTCAGGAATTGAAACCTTAAGCAACAATCTAGTACAGATTCTGAAACTATATTCCTATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CAA 72 bp | TGTTCCACCTATAGAGTTGCAGATCCCTTTAGCTCCTaGGGTACTTTCTCTAGCTCCTCCACTGGGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: CSTYRVADPFSS*GTFSSSSTGSP Trigger: AGGGCTCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACTCTATAGGTGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CAA 72 bp | TATCCACTAGTTGACTGTGAGCACTCACTTCTGTGTTaGCTAGGCCCCGGCATAGTGTCACAAGAGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: YPLVDCEHSLLC*LGPGIVSQETA Trigger: AGCTGTCTCTTGTGACACTATGCCGGGGCCTAGCAAACACAGAAGTGAGTGCTCACAGTCAACTAGTGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CAA 72 bp | GAGCCATTCTTCTTCAGGCATGTGGTTGCTGGTAGGTaGCCCATGTTCTTATGTATAGTCCTACACCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: EPFFFRHVVAGR*PMFLCIVLHQC Trigger: GCACTGGTGTAGGACTATACATAAGAACATGGGCAACCTACCAGCAACCACATGCCTGAAGAAGAATGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| CDS-3UTR TCA 90 bp | TTATGGGGTGGATCCCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTACTCATTCTAGAAGATaGTGTGGCTGCAGAGCTAAG | + |
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Preference number: 4 (lower is better) Translates to: LWGGSLDMAVSRWSILLSTHSRR*CGCRAK Trigger: CTTAGCTCTGCAGCCACATCATCTTCTAGAATGAGT...AGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCACCCCATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| CDS-3UTR GCA 90 bp | TTCTTCAGGCATGTGGTTGCTGGTAGGTTGCCCATGTTCTTATGTATAGTCCTAAAAAGGCTTTGTACTTaGCCCCAGCTGAAGGAATTC | + |
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Preference number: 4 (lower is better) Translates to: FFRHVVAGRLPMFLCIVLKRLCT*PQLKEF Trigger: GAATTCCTTCAGCTGGGGGCAAGTACAAAGCCTTTT...TAGGACTATACATAAGAACATGGGCAACCTACCAGCAACCACATGCCTGAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| CDS-3UTR CCA 90 bp | AGAGGCATAGTGTTCACACTTCAGTCTTCATTCTTCTTGAGTTTCATGTGTTTAATGGGCATGTGCAGGTaGGGGTCAGATATGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: RGIVFTLQSSFFLSFMCLMGMCR*GSDMMA Trigger: GGCCATCATATCTGACCCCCACCTGCACATGCCCAT...TAAACACATGAAACTCAAGAAGAATGAAGACTGAAGTGTGAACACTATGCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CAA 72 bp | AAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTaGCTAGTGTATGCAATGGTGTCAGCGTTTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: KRQLYLGPFSKI*LVYAMVSAFGS Trigger: GCTTCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| CDS-3UTR TCA 90 bp | TTTGTCATTACAAAGTTGGTAATTTTGGAGGAATCCTGTTGTCCCATCCCTTGGAGCCCGAGAAAGAGATaGATTTGCTTTGTGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: FVITKLVILEESCCPIPWSPRKR*ICFVCG Trigger: TCCGCACACAAAGCAAATTCATCTCTTTCTCGGGCT...CCAAGGGATGGGACAACAGGATTCCTCCAAAATTACCAACTTTGTAATGACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CAA 72 bp | GAAGCAGGTCACATTGGTGGGAGATTGGAGGAAAGTTaGAATAATAAAAGGTGTGTGAGTGTGTGTGTACGT | + |
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Preference number: 4 (lower is better) Translates to: EAGHIGGRLEES*NNKRCVSVCVR Trigger: ACGTACACACACACTCACACACCTTTTATTATTCAAACTTTCCTCCAATCTCCCACCAATGTGACCTGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| CDS-3UTR GCA 90 bp | AATCTTTCAGGATGTTGTGTTAAAGGACCTAGAATCTTTCAGGATGTTGTGTTACCAAAGAAGAAGGACTaGAGGTCAGAGTCTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NLSGCCVKGPRIFQDVVLPKKKD*RSESSV Trigger: CACAGAAGACTCTGACCTGCAGTCCTTCTTCTTTGG...TAACACAACATCCTGAAAGATTCTAGGTCCTTTAACACAACATCCTGAAAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CAA 72 bp | GTTGGTAATTTTGGAGGAATCCTGTTGTCCCATCCCTaGGTTCCCATATTTCTATATTTGTGTTCCAGAATG | + |
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Preference number: 4 (lower is better) Translates to: VGNFGGILLSHP*VPIFLYLCSRM Trigger: CATTCTGGAACACAAATATAGAAATATGGGAACCAAGGGATGGGACAACAGGATTCCTCCAAAATTACCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CAA 72 bp | TACTGGTTAGTTCATAATGTTGTTCCACCTATAGAGTaGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: YWLVHNVVPPIE*QIPLAPWVLSL Trigger: TAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACTCTATAGGTGGAACAACATTATGAACTAACCAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CAA 72 bp | CTAAACTTTGTCTCTGTAACTCCTTTTATGGGTGTTTaGTTCCCAATTCTAAGGAGAGGCATAGTGTTCACA | + |
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Preference number: 4 (lower is better) Translates to: LNFVSVTPFMGV*FPILRRGIVFT Trigger: TGTGAACACTATGCCTCTCCTTAGAATTGGGAACAAAACACCCATAAAAGGAGTTACAGAGACAAAGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| 3UTR CAA 72 bp | TGTCATTACAAAGTTGGTAATTTTGGAGGAATCCTGTaGTCCCATCCCTTGGTTCCCATATTTCTATATTTG | + |
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Preference number: 4 (lower is better) Translates to: CHYKVGNFGGIL*SHPLVPIFLYL Trigger: CAAATATAGAAATATGGGAACCAAGGGATGGGACAACAGGATTCCTCCAAAATTACCAACTTTGTAATGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| CDS-3UTR GCA 90 bp | AATCTTTCAGGATGTTGTGTTAAAGGACCTAGAATCTTTCAGGATGTTGTGTTAAGACCCCTAGACCATTaGTATAGAATAAGAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: NLSGCCVKGPRIFQDVVLRPLDH*YRIRRP Trigger: TGGTCTTCTTATTCTATAGCAATGGTCTAGGGGTCT...TAACACAACATCCTGAAAGATTCTAGGTCCTTTAACACAACATCCTGAAAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| CDS-3UTR CAA 90 bp | ATCAGAGCTACTGCCATGCTGTCTGTCTCTGGTGCTAGGGCTTGTGCTCTTCTCACAATGATGAGCAAGTaGCCTGTGATGGTGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: IRATAMLSVSGARACALLTMMSK*PVMVTR Trigger: CCTGGTCACCATCACAGGCAACTTGCTCATCATTGT...GAGAAGAGCACAAGCCCTAGCACCAGAGACAGACAGCATGGCAGTAGCTCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| CDS-3UTR CAA 90 bp | TGTTTGCTAGGCCCCGGCATAGTGTCACAAGAGACAGCTATATCTGGGTCCTTTATATTCTGCAGAACCTaGGGGATAGTGGTGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: CLLGPGIVSQETAISGSFIFCRT*GIVVEV Trigger: CACCTCCACCACTATCCCCAAGGTTCTGCAGAATAT...AAAGGACCCAGATATAGCTGTCTCTTGTGACACTATGCCGGGGCCTAGCAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| CDS-3UTR CAA 90 bp | ATCAGAGCTACTGCCATGCTGTCTGTCTCTGGTGCTAGGGCTTGTGCTCTTCTCACTGATAGGAGTAAATaGTCCAGGCATCCAAACACA | + |
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Preference number: 5 (lower is better) Translates to: IRATAMLSVSGARACALLTDRSK*SRHPNT Trigger: TGTGTTTGGATGCCTGGACAATTTACTCCTATCAGT...GAGAAGAGCACAAGCCCTAGCACCAGAGACAGACAGCATGGCAGTAGCTCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| CDS-3UTR CAA 90 bp | TTATGGGGTGGATCCCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTGAGAAAGAGATGAATTaGCTTTGTGTGCGGATATTC | + |
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Preference number: 5 (lower is better) Translates to: LWGGSLDMAVSRWSILLSEKEMN*LCVRIF Trigger: GAATATCCGCACACAAAGCAAATTCATCTCTTTCTC...AGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCACCCCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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| CDS-3UTR CAA 90 bp | AGAGGCATAGTGTTCACACTTCAGTCTTCATTCTTCTTGAGTTTCATGTGTTTACAGGTAGAAAAGGCTTaGTACTTGCCCCCAGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: RGIVFTLQSSFFLSFMCLQVEKA*YLPPAE Trigger: TTCAGCTGGGGGCAAGTACAAAGCCTTTTCTACCTG...TAAACACATGAAACTCAAGAAGAATGAAGACTGAAGTGTGAACACTATGCCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205100.3 |
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