Pregenerated sensors for OLFR1354 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094673Ensembl transcript IDs: ENSMUST00000075859.5, ENSMUST00000204587.4, ENSMUST00000217073.3
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTCCAAACCTTCCAAAAATATTCATAGGTATCTTATCCCTTTATaGTCTGAAGACAGAGTCCCAATCTCTGGCTCTGCAGCTTCACAG | + |
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Preference number: 1 (lower is better) Translates to: FSKPSKNIHRYLIPL*SEDRVPISGSAASQ Trigger: CTGTGAAGCTGCAGAGCCAGAGATTGGGACTCTGTCTTCAGACCATAAAGGGATAAGATACCTATGAATATTTTTGGAAGGTTTGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR TCA 90 bp | TATACATCTCAAATTGTTACACTTGAATGTACTCATATAAGAGAGTaGTCACACTGCAGTTTTGTTAGAAGCCATCTAGGAAGGGCTAGG | + |
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Preference number: 1 (lower is better) Translates to: YTSQIVTLECTHIRE*SHCSFVRSHLGRAR Trigger: CCTAGCCCTTCCTAGATGGCTTCTAACAAAACTGCAGTGTGATCACTCTCTTATATGAGTACATTCAAGTGTAACAATTTGAGATGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR TCA 90 bp | GAAGTAAATTTTGCTCTGGAGAGCAGCATTTACTCTTCCTACCTTTaGACACGTTCTCCAAACCTTCCAAAAATATTCATAGGTATCTTA | + |
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Preference number: 1 (lower is better) Translates to: EVNFALESSIYSSYL*TRSPNLPKIFIGIL Trigger: TAAGATACCTATGAATATTTTTGGAAGGTTTGGAGAACGTGTTCAAAGGTAGGAAGAGTAAATGCTGCTCTCCAGAGCAAAATTTACTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR TCA 90 bp | TATGCAATATATGTCACATATGAGGAAATTATTTTCAAATGTTGCTaGCCCAAACACATTGAGTCCTGTGTTTGGAATAACTCTGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: YAIYVTYEEIIFKCC*PKHIESCVWNNSGK Trigger: CTTCCCAGAGTTATTCCAAACACAGGACTCAATGTGTTTGGGTCAGCAACATTTGAAAATAATTTCCTCATATGTGACATATATTGCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR TCA 90 bp | ACAATAACAAGTGGTTGTTCAGCCCTAGAAACACACTGCCAATACTaGAGGACTCAACAGTTTGCATTTATATTCATTCAAACATTTGTT | + |
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Preference number: 1 (lower is better) Translates to: TITSGCSALETHCQY*RTQQFAFIFIQTFV Trigger: AACAAATGTTTGAATGAATATAAATGCAAACTGTTGAGTCCTTCAGTATTGGCAGTGTGTTTCTAGGGCTGAACAACCACTTGTTATTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR-3UTR CCA 90 bp | AGATCTCCAATTCTGCTCCAAGGGTATCTACCTCACCTAGAAGCCAGGTATCCTGCCTACTGGTTTGCATaGCTGCAATGGGTGAGCATT | + |
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Preference number: 2 (lower is better) Translates to: RSPILLQGYLPHLEARYPAYWFA*LQWVSI Trigger: AATGCTCACCCATTGCAGCCATGCAAACCAGTAGGC...AGGATACCTGGCTTCTAGGTGAGGTAGATACCCTTGGAGCAGAATTGGAGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR-3UTR TCA 90 bp | ATGGATGAGTCCCCTCACTGGTTATACAATAACAAGTGGTTGTTCAGCCCTAGAGCTAGGGAATGCAAGTaGATGTTCTGGAGAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: MDESPHWLYNNKWLFSPRARECK*MFWRRP Trigger: AGGCCTTCTCCAGAACATTCACTTGCATTCCCTAGC...TCTAGGGCTGAACAACCACTTGTTATTGTATAACCAGTGAGGGGACTCATCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR-3UTR CCA 90 bp | GGTATCTTATCCCTTTATGGTCTGAAGACAGAGTCCCAATCTCTGGCTCTGCAGCACAGTCTGCAACAATaGAAACTTCAGCCAGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: GILSLYGLKTESQSLALQHSLQQ*KLQPVQ Trigger: TTGGACTGGCTGAAGTTTCCATTGTTGCAGACTGTG...CTGCAGAGCCAGAGATTGGGACTCTGTCTTCAGACCATAAAGGGATAAGATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR-3UTR TCA 90 bp | TTGTTCAGCCCTAGAAACACACTGCCAATACTGAAGGACTCAACAGTTTGCATTGCTAGGGAATGCAAGTaGATGTTCTGGAGAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LFSPRNTLPILKDSTVCIARECK*MFWRRP Trigger: AGGCCTTCTCCAGAACATTCACTTGCATTCCCTAGC...AATGCAAACTGTTGAGTCCTTCAGTATTGGCAGTGTGTTTCTAGGGCTGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCAATTCTGCTCCAAGGGTATCTACCTCACCTAGAAGCCAGGTATCCTTGCACAGCATTTACAACTaGACCAGGCAAAACACAGAA | + |
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Preference number: 2 (lower is better) Translates to: ISNSAPRVSTSPRSQVSLHSIYN*TRQNTE Trigger: TTCTGTGTTTTGCCTGGTGCAGTTGTAAATGCTGTG...CAAGGATACCTGGCTTCTAGGTGAGGTAGATACCCTTGGAGCAGAATTGGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR CAA 90 bp | GCACCAGGCAAAACACAGAACATTTCTATCAGCGAAATATCACTATaGTTGCCCTTTAAGGCCGCATTAGCCTCTCTCCTTTCCCATAAC | + |
|
Preference number: 2 (lower is better) Translates to: APGKTQNISISEISL*LPFKAALASLLSHN Trigger: GTTATGGGAAAGGAGAGAGGCTAATGCGGCCTTAAAGGGCAACAATAGTGATATTTCGCTGATAGAAATGTTCTGTGTTTTGCCTGGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR CAA 90 bp | CCTGAAATGGATGAGTCCCCTCACTGGTTATACAATAACAAGTGGTaGTTCAGCCCTAGAAACACACTGCCAATACTGAAGGACTCAACA | + |
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Preference number: 2 (lower is better) Translates to: PEMDESPHWLYNNKW*FSPRNTLPILKDST Trigger: TGTTGAGTCCTTCAGTATTGGCAGTGTGTTTCTAGGGCTGAACAACCACTTGTTATTGTATAACCAGTGAGGGGACTCATCCATTTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR-3UTR CCA 90 bp | TTCCTACCTTTGAACACGTTCTCCAAACCTTCCAAAAATATTCATAGGTATCTTCAGAGTCCCAATCTCTaGCTCTGCAGCTTCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: FLPLNTFSKPSKNIHRYLQSPNL*LCSFTV Trigger: GACTGTGAAGCTGCAGAGCCAGAGATTGGGACTCTG...AAGATACCTATGAATATTTTTGGAAGGTTTGGAGAACGTGTTCAAAGGTAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGATAACTGATTGCCCAAAGTTGTCCTATGATATACTCACATCATACTGCAGGTATCTTGAAAGTTaGGAAAGGGTGATGCATCCC | + |
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Preference number: 2 (lower is better) Translates to: KEITDCPKLSYDILTSYCRYLES*ERVMHP Trigger: GGGATGCATCACCCTTTCTCAACTTTCAAGATACCT...GCAGTATGATGTGAGTATATCATAGGACAACTTTGGGCAATCAGTTATCTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR CAA 90 bp | TCACATATGAGGAAATTATTTTCAAATGTTGCTGACCCAAACACATaGAGTCCTGTGTTTGGAATAACTCTGGGAAGCCAGGACGACTAT | + |
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Preference number: 2 (lower is better) Translates to: SHMRKLFSNVADPNT*SPVFGITLGSQDDY Trigger: ATAGTCGTCCTGGCTTCCCAGAGTTATTCCAAACACAGGACTCAATGTGTTTGGGTCAGCAACATTTGAAAATAATTTCCTCATATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR CAA 90 bp | GGAAGTAAATTTTGCTCTGGAGAGCAGCATTTACTCTTCCTACCTTaGAACACGTTCTCCAAACCTTCCAAAAATATTCATAGGTATCTT | + |
|
Preference number: 2 (lower is better) Translates to: GSKFCSGEQHLLFLP*NTFSKPSKNIHRYL Trigger: AAGATACCTATGAATATTTTTGGAAGGTTTGGAGAACGTGTTCAAAGGTAGGAAGAGTAAATGCTGCTCTCCAGAGCAAAATTTACTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR CCA 72 bp | CAAGTGAATGTTCTGGAGAAGGCCTACTGGTTTGCATaGCTGCAATGGGTGAGCATTAAGACTGCAGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: QVNVLEKAYWFA*LQWVSIKTAGS Trigger: GGACCCTGCAGTCTTAATGCTCACCCATTGCAGCCATGCAAACCAGTAGGCCTTCTCCAGAACATTCACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR GCA 72 bp | CAGAGTCCCAATCTCTGGCTCTGCAGCTTCACAGTCTaGAACAATGGAAACTTCAGCCAGTCCAACAATACA | + |
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Preference number: 3 (lower is better) Translates to: QSPNLWLCSFTV*NNGNFSQSNNT Trigger: TGTATTGTTGGACTGGCTGAAGTTTCCATTGTTGCAGACTGTGAAGCTGCAGAGCCAGAGATTGGGACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR-3UTR CAA 90 bp | AGATCTCCAATTCTGCTCCAAGGGTATCTACCTCACCTAGAAGCCAGGTATCCTTCCCAGGATTCCTTGTaGTTGCTGATATGGCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: RSPILLQGYLPHLEARYPSQDSL*LLIWLS Trigger: GGAAAGCCATATCAGCAACAACAAGGAATCCTGGGA...AGGATACCTGGCTTCTAGGTGAGGTAGATACCCTTGGAGCAGAATTGGAGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR CCA 72 bp | ATGGATGAGTCCCCTCACTGGTTATACAATAACAAGTaGTTGTTCAGCCCTAGAAACACACTGCCAATACTG | + |
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Preference number: 3 (lower is better) Translates to: MDESPHWLYNNK*LFSPRNTLPIL Trigger: CAGTATTGGCAGTGTGTTTCTAGGGCTGAACAACCACTTGTTATTGTATAACCAGTGAGGGGACTCATCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR-3UTR CAA 90 bp | ATGGATGAGTCCCCTCACTGGTTATACAATAACAAGTGGTTGTTCAGCCCTAGATTACTCTTCCTACCTTaGAACACGTTCTCCAAACCT | + |
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Preference number: 3 (lower is better) Translates to: MDESPHWLYNNKWLFSPRLLFLP*NTFSKP Trigger: AGGTTTGGAGAACGTGTTCAAAGGTAGGAAGAGTAA...TCTAGGGCTGAACAACCACTTGTTATTGTATAACCAGTGAGGGGACTCATCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR TCA 72 bp | TTGTGCACATGTGTATATTTTAGGCACCCACTAATATaGAGGGACAGCAATCCTATAGGAAGACCAAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: LCTCVYFRHPLI*RDSNPIGRPRV Trigger: GACTCTTGGTCTTCCTATAGGATTGCTGTCCCTTCATATTAGTGGGTGCCTAAAATATACACATGTGCACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR CCA 72 bp | AAAGAGGAGACTATAAATCTTGGGTACAAAGAGATATaGAGGGGGAGGAGAAACGATGTGAATCTCTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: KEETINLGYKEI*RGRRNDVNLCE Trigger: TTCACAGAGATTCACATCGTTTCTCCTCCCCCTCCATATCTCTTTGTACCCAAGATTTATAGTCTCCTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR TCA 72 bp | TTTGCTCTGGAGAGCAGCATTTACTCTTCCTACCTTTaGACACGTTCTCCAAACCTTCCAAAAATATTCATA | + |
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Preference number: 3 (lower is better) Translates to: FALESSIYSSYL*TRSPNLPKIFI Trigger: TATGAATATTTTTGGAAGGTTTGGAGAACGTGTTCAAAGGTAGGAAGAGTAAATGCTGCTCTCCAGAGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR TCA 72 bp | AGTGGTTGTTCAGCCCTAGAAACACACTGCCAATACTaGAGGACTCAACAGTTTGCATTTATATTCATTCAA | + |
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Preference number: 3 (lower is better) Translates to: SGCSALETHCQY*RTQQFAFIFIQ Trigger: TTGAATGAATATAAATGCAAACTGTTGAGTCCTTCAGTATTGGCAGTGTGTTTCTAGGGCTGAACAACCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR GCA 90 bp | CTCTGGCTCTGCAGCTTCACAGTCTGCAACAATGGAAACTTCAGCCAGTCCAACCATCACAGAGGCTCTTaGAGCAGAGTGAGAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LWLCSFTVCNNGNFSQSNHHRGS*SRVRAL Trigger: CAAAGCTCTCACTCTGCTGCAAGAGCCTCTGTGATG...GTTGGACTGGCTGAAGTTTCCATTGTTGCAGACTGTGAAGCTGCAGAGCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR GCA 90 bp | CCTTTATGGTCTGAAGACAGAGTCCCAATCTCTGGCTCTGCAGCTTCACAGTCTCATCACAGAGGCTCTTaGAGCAGAGTGAGAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PLWSEDRVPISGSAASQSHHRGS*SRVRAL Trigger: CAAAGCTCTCACTCTGCTGCAAGAGCCTCTGTGATG...AGACTGTGAAGCTGCAGAGCCAGAGATTGGGACTCTGTCTTCAGACCATAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR GCA 90 bp | AGACAGAGTCCCAATCTCTGGCTCTGCAGCTTCACAGTCTGCAACAATGGAAACCATCACAGAGGCTCTTaGAGCAGAGTGAGAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: RQSPNLWLCSFTVCNNGNHHRGS*SRVRAL Trigger: CAAAGCTCTCACTCTGCTGCAAGAGCCTCTGTGATG...GTTTCCATTGTTGCAGACTGTGAAGCTGCAGAGCCAGAGATTGGGACTCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR TCA 90 bp | AGGTATCTTATCCCTTTATGGTCTGAAGACAGAGTCCCAATCTCTGGCTCTGCAATGGGTGTGTGCAGGTaGGACTGTGTGATGATGACC | + |
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Preference number: 4 (lower is better) Translates to: RYLIPLWSEDRVPISGSAMGVCR*DCVMMT Trigger: GGTCATCATCACACAGTCTCACCTGCACACACCCAT...TGCAGAGCCAGAGATTGGGACTCTGTCTTCAGACCATAAAGGGATAAGATACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR TCA 90 bp | GGTATCTTATCCCTTTATGGTCTGAAGACAGAGTCCCAATCTCTGGCTCTGCAGGCTCTTGCAGCAGAGTaGGAGCTTTGGATCACAACA | + |
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Preference number: 4 (lower is better) Translates to: GILSLYGLKTESQSLALQALAAE*ELWITT Trigger: TGTTGTGATCCAAAGCTCTCACTCTGCTGCAAGAGC...CTGCAGAGCCAGAGATTGGGACTCTGTCTTCAGACCATAAAGGGATAAGATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR TCA 90 bp | AGGTATCTTATCCCTTTATGGTCTGAAGACAGAGTCCCAATCTCTGGCTCTGCAGCTCTTGCAGCAGAGTaGGAGCTTTGGATCACAACA | + |
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Preference number: 4 (lower is better) Translates to: RYLIPLWSEDRVPISGSAALAAE*ELWITT Trigger: TGTTGTGATCCAAAGCTCTCACTCTGCTGCAAGAGC...TGCAGAGCCAGAGATTGGGACTCTGTCTTCAGACCATAAAGGGATAAGATACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR TCA 90 bp | TTGTTCAGCCCTAGAAACACACTGCCAATACTGAAGGACTCAACAGTTTGCATTATGGGTGTGTGCAGGTaGGACTGTGTGATGATGACC | + |
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Preference number: 4 (lower is better) Translates to: LFSPRNTLPILKDSTVCIMGVCR*DCVMMT Trigger: GGTCATCATCACACAGTCTCACCTGCACACACCCAT...AATGCAAACTGTTGAGTCCTTCAGTATTGGCAGTGTGTTTCTAGGGCTGAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR GCA 90 bp | AGACAGAGTCCCAATCTCTGGCTCTGCAGCTTCACAGTCTGCAACAATGGAAACCTGGCTAATACAGTCTaGATATGTAATGGCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: RQSPNLWLCSFTVCNNGNLANTV*ICNGLA Trigger: AGCAAGGCCATTACATATGCAGACTGTATTAGCCAG...GTTTCCATTGTTGCAGACTGTGAAGCTGCAGAGCCAGAGATTGGGACTCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR GCA 90 bp | ACAGAGTCCCAATCTCTGGCTCTGCAGCTTCACAGTCTGCAACAATGGAAACTTCTGGCTAATACAGTCTaGATATGTAATGGCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: TESQSLALQLHSLQQWKLLANTV*ICNGLA Trigger: AGCAAGGCCATTACATATGCAGACTGTATTAGCCAG...AAGTTTCCATTGTTGCAGACTGTGAAGCTGCAGAGCCAGAGATTGGGACTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR CAA 72 bp | ACTGCAGGGTCCTTACACACTTCATCCCAGGATTCCTaGTTGTTGCTGATATGGCTTTCCTGTCATTATTAC | + |
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Preference number: 4 (lower is better) Translates to: TAGSLHTSSQDS*LLLIWLSCHYY Trigger: GTAATAATGACAGGAAAGCCATATCAGCAACAACAAGGAATCCTGGGATGAAGTGTGTAAGGACCCTGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR CAA 72 bp | GATGAGTCCCCTCACTGGTTATACAATAACAAGTGGTaGTTCAGCCCTAGAAACACACTGCCAATACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: DESPHWLYNNKW*FSPRNTLPILK Trigger: CTTCAGTATTGGCAGTGTGTTTCTAGGGCTGAACAACCACTTGTTATTGTATAACCAGTGAGGGGACTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR TCA 90 bp | CTTATCCCTTTATGGTCTGAAGACAGAGTCCCAATCTCTGGCTCTGCAGCTTCAGTACAAGATTCATTATaGGTTGGCTTGAAAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LIPLWSEDRVPISGSAASVQDSL*VGLKSC Trigger: ACAGCTTTTCAAGCCAACTCATAATGAATCTTGTAC...TGAAGCTGCAGAGCCAGAGATTGGGACTCTGTCTTCAGACCATAAAGGGATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR CCA 90 bp | AATCTCTGGCTCTGCAGCTTCACAGTCTGCAACAATGGAAACTTCAGCCAGTCCAGATTCATTATGAGTTaGCTTGAAAAGCTGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: NLWLCSFTVCNNGNFSQSRFIMS*LEKLSE Trigger: TTCAGACAGCTTTTCAAGCCAACTCATAATGAATCT...GGACTGGCTGAAGTTTCCATTGTTGCAGACTGTGAAGCTGCAGAGCCAGAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR CAA 72 bp | GCAGGGTCCTTACACACTTCATCCCAGGATTCCTTGTaGTTGCTGATATGGCTTTCCTGTCATTATTACATA | + |
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Preference number: 4 (lower is better) Translates to: AGSLHTSSQDSL*LLIWLSCHYYI Trigger: TATGTAATAATGACAGGAAAGCCATATCAGCAACAACAAGGAATCCTGGGATGAAGTGTGTAAGGACCCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR TCA 90 bp | AGGTATCTTATCCCTTTATGGTCTGAAGACAGAGTCCCAATCTCTGGCTCTGCAGTACAAGATTCATTATaGGTTGGCTTGAAAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RYLIPLWSEDRVPISGSAVQDSL*VGLKSC Trigger: ACAGCTTTTCAAGCCAACTCATAATGAATCTTGTAC...TGCAGAGCCAGAGATTGGGACTCTGTCTTCAGACCATAAAGGGATAAGATACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR CCA 90 bp | GGTATCTTATCCCTTTATGGTCTGAAGACAGAGTCCCAATCTCTGGCTCTGCAGAGATTCATTATGAGTTaGCTTGAAAAGCTGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: GILSLYGLKTESQSLALQRFIMS*LEKLSE Trigger: TTCAGACAGCTTTTCAAGCCAACTCATAATGAATCT...CTGCAGAGCCAGAGATTGGGACTCTGTCTTCAGACCATAAAGGGATAAGATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR TCA 90 bp | TTCATAGGTATCTTATCCCTTTATGGTCTGAAGACAGAGTCCCAATCTCTGGCTGTACAAGATTCATTATaGGTTGGCTTGAAAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FIGILSLYGLKTESQSLAVQDSL*VGLKSC Trigger: ACAGCTTTTCAAGCCAACTCATAATGAATCTTGTAC...AGCCAGAGATTGGGACTCTGTCTTCAGACCATAAAGGGATAAGATACCTATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR CAA 72 bp | AAAACACAGAACATTTCTATCAGCGAAATATCACTATaGTTGCCCTTTAAGGCCGCATTAGCCTCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: KTQNISISEISL*LPFKAALASLL Trigger: AAGGAGAGAGGCTAATGCGGCCTTAAAGGGCAACAATAGTGATATTTCGCTGATAGAAATGTTCTGTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| 3UTR CAA 72 bp | TTTTGCTCTGGAGAGCAGCATTTACTCTTCCTACCTTaGAACACGTTCTCCAAACCTTCCAAAAATATTCAT | + |
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Preference number: 4 (lower is better) Translates to: FCSGEQHLLFLP*NTFSKPSKNIH Trigger: ATGAATATTTTTGGAAGGTTTGGAGAACGTGTTCAAAGGTAGGAAGAGTAAATGCTGCTCTCCAGAGCAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR GCA 90 bp | TTCCTACCTTTGAACACGTTCTCCAAACCTTCCAAAAATATTCATAGGTATCTTCTGGCTAATACAGTCTaGATATGTAATGGCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: FLPLNTFSKPSKNIHRYLLANTV*ICNGLA Trigger: AGCAAGGCCATTACATATGCAGACTGTATTAGCCAG...AAGATACCTATGAATATTTTTGGAAGGTTTGGAGAACGTGTTCAAAGGTAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR GCA 90 bp | AATATTCATAGGTATCTTATCCCTTTATGGTCTGAAGACAGAGTCCCAATCTCTAAAGTTGTCCAATTCTaGAAAAACCAAGAAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: NIHRYLIPLWSEDRVPISKVVQF*KNQEDR Trigger: TCTGTCTTCTTGGTTTTTGCAGAATTGGACAACTTT...AGAGATTGGGACTCTGTCTTCAGACCATAAAGGGATAAGATACCTATGAATATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR GCA 90 bp | TCCAAAAATATTCATAGGTATCTTATCCCTTTATGGTCTGAAGACAGAGTCCCAAAAGTTGTCCAATTCTaGAAAAACCAAGAAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: SKNIHRYLIPLWSEDRVPKVVQF*KNQEDR Trigger: TCTGTCTTCTTGGTTTTTGCAGAATTGGACAACTTT...TGGGACTCTGTCTTCAGACCATAAAGGGATAAGATACCTATGAATATTTTTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS-3UTR CCA 90 bp | CTACCTTTGAACACGTTCTCCAAACCTTCCAAAAATATTCATAGGTATCTTATCAGATTCATTATGAGTTaGCTTGAAAAGCTGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LPLNTFSKPSKNIHRYLIRFIMS*LEKLSE Trigger: TTCAGACAGCTTTTCAAGCCAACTCATAATGAATCT...GATAAGATACCTATGAATATTTTTGGAAGGTTTGGAGAACGTGTTCAAAGGTAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS CAA 72 bp | ATACATCACAGAGGCTCTTGCAGCAGAGTGAGAGCTTaGGATCACAACAGAACTGACATACACTCCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: IHHRGSCSRVRA*DHNRTDIHSKA Trigger: GGCCTTGGAGTGTATGTCAGTTCTGTTGTGATCCAAAGCTCTCACTCTGCTGCAAGAGCCTCTGTGATGTAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS CAA 90 bp | GACCACAGTATACATCACAGAGGCTCTTGCAGCAGAGTGAGAGCTTaGGATCACAACAGAACTGACATACACTCCAAGGCCTGTACTATA | + |
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Preference number: 6 (lower is better) Translates to: DHSIHHRGSCSRVRA*DHNRTDIHSKACTI Trigger: TATAGTACAGGCCTTGGAGTGTATGTCAGTTCTGTTGTGATCCAAAGCTCTCACTCTGCTGCAAGAGCCTCTGTGATGTATACTGTGGTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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| CDS TCA 72 bp | ATGAGTTGGCTTGAAAAGCTGTCTGAACATGTGAGTTaGGACAGCTGGTTAAGCTCACAGAAGAAGTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: MSWLEKLSEHVS*DSWLSSQKKWG Trigger: TCCCCACTTCTTCTGTGAGCTTAACCAGCTGTCTCAACTCACATGTTCAGACAGCTTTTCAAGCCAACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075859.5 ENSMUST00000204587.4 ENSMUST00000217073.3 |
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