Pregenerated sensors for OLFR1353 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042774Ensembl transcript IDs: ENSMUST00000039718.9, ENSMUST00000205193.3
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCACAGACAGGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTaGGGGATCCACATGGAGACTGAGCTACACATCTGCTACATATAT | + |
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Preference number: 1 (lower is better) Translates to: SQTGNSFNHSHYSNC*GIHMETELHICYIY Trigger: ATATATGTAGCAGATGTGTAGCTCAGTCTCCATGTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCCTGTCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR-3UTR TCA 90 bp | CAGACAGGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACAGAAAACAAATGGGATaGCATAAAGCTAGGAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: QTGNSFNHSHYSNCWGIHRKQMG*HKARRN Trigger: GTTCCTCCTAGCTTTATGTCATCCCATTTGTTTTCT...GTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCCTGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACATGGAGAAAACAAATGGGATaGCATAAAGCTAGGAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: QATALITATTPIVGGSTWRKQMG*HKARRN Trigger: GTTCCTCCTAGCTTTATGTCATCCCATTTGTTTTCT...CCATGTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTCATTTTGCAATAACTTTGGGGGAGGGCACAATGAAGATTGTTTCAGTAACCCCAGGAATGTTCTTTaGTTGGTGGCTCAGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: VSFCNNFGGGHNEDCFSNPRNVL*LVAQSL Trigger: CAGAGACTGAGCCACCAACCAAAGAACATTCCTGGG...GTTACTGAAACAATCTTCATTGTGCCCTCCCCCAAAGTTATTGCAAAATGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR-3UTR CAA 90 bp | CAGACAGGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACGCCCAGGAATGTTCTTaGGTTGGTGGCTCAGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: QTGNSFNHSHYSNCWGIHAQECS*VGGSVS Trigger: AGAGACTGAGCCACCAACCAAAGAACATTCCTGGGC...GTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCCTGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACATGGAGACTGGCCCAGGAATGTTCTTaGGTTGGTGGCTCAGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: TALITATTPIVGGSTWRLAQECS*VGGSVS Trigger: AGAGACTGAGCCACCAACCAAAGAACATTCCTGGGC...CAGTCTCCATGTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR GCA 72 bp | TGTTGGGGGATCCACATGGAGACTGAGCTACACATCTaGTACATATATGTCAAGAGCCTTGGTCAAGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: CWGIHMETELHI*YIYVKSLGQAQ Trigger: CTGGGCTTGACCAAGGCTCTTGACATATATGTAGCAGATGTGTAGCTCAGTCTCCATGTGGATCCCCCAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR CCA 72 bp | GGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTaGGGGATCCACATGGAGACTGAGCTACACATCTGC | + |
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Preference number: 3 (lower is better) Translates to: GNSFNHSHYSNC*GIHMETELHIC Trigger: GCAGATGTGTAGCTCAGTCTCCATGTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR-3UTR CAA 90 bp | CAGGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACATGGCTCTCCCTTGGAGATTaGGTGACTAGTAGATTGCTC | + |
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Preference number: 3 (lower is better) Translates to: QATALITATTPIVGGSTWLSLGD*VTSRLL Trigger: GAGCAATCTACTAGTCACCAAATCTCCAAGGGAGAG...CCATGTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR-3UTR CAA 90 bp | CAGGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACATGGAGGAATGTTCTTTGGTaGGTGGCTCAGTCTCTGACA | + |
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Preference number: 3 (lower is better) Translates to: QATALITATTPIVGGSTWRNVLW*VAQSLT Trigger: TGTCAGAGACTGAGCCACCAACCAAAGAACATTCCT...CCATGTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR-3UTR CAA 90 bp | GGATCCACATGGAGACTGAGCTACACATCTGCTACATATATGTCAAGAGCCTTGAGGAATGTTCTTTGGTaGGTGGCTCAGTCTCTGACA | + |
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Preference number: 3 (lower is better) Translates to: GSTWRLSYTSATYMSRALRNVLW*VAQSLT Trigger: TGTCAGAGACTGAGCCACCAACCAAAGAACATTCCT...CAAGGCTCTTGACATATATGTAGCAGATGTGTAGCTCAGTCTCCATGTGGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR TCA 72 bp | GGTGCATTAAATCTCTGCAGGTATTTCTTCTCCCACTaGGGTGAGATATTGCAGCCCAGTCTGGAGACAGAA | + |
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Preference number: 3 (lower is better) Translates to: GALNLCRYFFSH*GEILQPSLETE Trigger: TTCTGTCTCCAGACTGGGCTGCAATATCTCACCTCAGTGGGAGAAGAAATACCTGCAGAGATTTAATGCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR CCA 72 bp | TCTTCTCCCACTGAGGTGAGATATTGCAGCCCAGTCTaGAGACAGAATTCACAGACAGGCAACAGCTTTAAT | + |
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Preference number: 3 (lower is better) Translates to: SSPTEVRYCSPV*RQNSQTGNSFN Trigger: ATTAAAGCTGTTGCCTGTCTGTGAATTCTGTCTCCAGACTGGGCTGCAATATCTCACCTCAGTGGGAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR CCA 72 bp | ATCACAGCCACTACTCCAATTGTTGGGGGATCCACATaGAGACTGAGCTACACATCTGCTACATATATGTCA | + |
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Preference number: 3 (lower is better) Translates to: ITATTPIVGGST*RLSYTSATYMS Trigger: TGACATATATGTAGCAGATGTGTAGCTCAGTCTCCATGTGGATCCCCCAACAATTGGAGTAGTGGCTGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR TCA 72 bp | ATTAAATCTCTGCAGGTATTTCTTCTCCCACTGAGGTaGGATATTGCAGCCCAGTCTGGAGACAGAATTCAC | + |
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Preference number: 3 (lower is better) Translates to: IKSLQVFLLPLR*DIAAQSGDRIH Trigger: GTGAATTCTGTCTCCAGACTGGGCTGCAATATCTCACCTCAGTGGGAGAAGAAATACCTGCAGAGATTTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR TCA 72 bp | AGCCCAGGAATGTTCTTTGGTTGGTGGCTCAGTCTCTaGCAGTCTGAGAGCATAAATGTTAATCAAATGAGT | + |
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Preference number: 3 (lower is better) Translates to: SPGMFFGWWLSL*QSESINVNQMS Trigger: ACTCATTTGATTAACATTTATGCTCTCAGACTGTCAGAGACTGAGCCACCAACCAAAGAACATTCCTGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR CAA 72 bp | TATGTCAAGAGCCTTGGTCAAGCCCAGGAATGTTCTTaGGTTGGTGGCTCAGTCTCTGACAGTCTGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: YVKSLGQAQECS*VGGSVSDSLRA Trigger: TGCTCTCAGACTGTCAGAGACTGAGCCACCAACCAAAGAACATTCCTGGGCTTGACCAAGGCTCTTGACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR TCA 90 bp | CAGGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACATGGGCTTTGTACTTCCCATaGACTGAGGACATTGCACGT | + |
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Preference number: 4 (lower is better) Translates to: QATALITATTPIVGGSTWALYFP*TEDIAR Trigger: ACGTGCAATGTCCTCAGTTCATGGGAAGTACAAAGC...CCATGTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR TCA 90 bp | GCTCATGCTCCAGTGGAAGGCCACATGCTTATAGGCACCATAAACTGTCCTCATTGTTGCACTTGTTTGTaGCCCATGGTTTGCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AHAPVEGHMLIGTINCPHCCTCL*PMVCSR Trigger: TCTGCTGCAAACCATGGGTCACAAACAAGTGCAACA...ATGAGGACAGTTTATGGTGCCTATAAGCATGTGGCCTTCCACTGGAGCATGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR TCA 90 bp | CAGACAGGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACTGTTGCACTTGTTTGTaGCCCATGGTTTGCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QTGNSFNHSHYSNCWGIHCCTCL*PMVCSR Trigger: TCTGCTGCAAACCATGGGTCACAAACAAGTGCAACA...GTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCCTGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CCA 90 bp | CAGACAGGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACTTCACAGAAGAAGTGTaGGATTTCTGGCTGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: QTGNSFNHSHYSNCWGIHFTEEV*DFWLCA Trigger: TGCACACAGCCAGAAATCCCACACTTCTTCTGTGAA...GTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCCTGTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CCA 90 bp | ATCTCTGCAGGTATTTCTTCTCCCACTGAGGTGAGATATTGCAGCCCAGTCTGGTTCACAGAAGAAGTGTaGGATTTCTGGCTGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ISAGISSPTEVRYCSPVWFTEEV*DFWLCA Trigger: TGCACACAGCCAGAAATCCCACACTTCTTCTGTGAA...CCAGACTGGGCTGCAATATCTCACCTCAGTGGGAGAAGAAATACCTGCAGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| 3UTR CAA 72 bp | CTGAGCTACACATCTGCTACATATATGTCAAGAGCCTaGGTCAAGCCCAGGAATGTTCTTTGGTTGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LSYTSATYMSRA*VKPRNVLWLVA Trigger: AGCCACCAACCAAAGAACATTCCTGGGCTTGACCAAGGCTCTTGACATATATGTAGCAGATGTGTAGCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR TCA 90 bp | CAGGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACATGGGATACAACTAATAGATaGGATGCACAGGTGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: QATALITATTPIVGGSTWDTTNR*DAQVEN Trigger: ATTCTCCACCTGTGCATCTCATCTATTAGTTGTATC...CCATGTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR TCA 90 bp | GCTCATGCTCCAGTGGAAGGCCACATGCTTATAGGCACCATAAACTGTCCTCATGATACAACTAATAGATaGGATGCACAGGTGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: AHAPVEGHMLIGTINCPHDTTNR*DAQVEN Trigger: ATTCTCCACCTGTGCATCTCATCTATTAGTTGTATC...ATGAGGACAGTTTATGGTGCCTATAAGCATGTGGCCTTCCACTGGAGCATGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR GCA 90 bp | ACATGGAGACTGAGCTACACATCTGCTACATATATGTCAAGAGCCTTGGTCAAGAAATACATGGGGGTATaGAGTCGGGGGCCTGAAATA | + |
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Preference number: 4 (lower is better) Translates to: TWRLSYTSATYMSRALVKKYMGV*SRGPEI Trigger: TATTTCAGGCCCCCGACTGCATACCCCCATGTATTT...CTTGACCAAGGCTCTTGACATATATGTAGCAGATGTGTAGCTCAGTCTCCATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR GCA 90 bp | GTGTCATTTTGCAATAACTTTGGGGGAGGGCACAATGAAGATTGTTTCAGTAACGGATTTCTGGCTGTGTaGAGAAGGGCAGCTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: VSFCNNFGGGHNEDCFSNGFLAV*RRAAPT Trigger: TGTTGGAGCTGCCCTTCTGCACACAGCCAGAAATCC...GTTACTGAAACAATCTTCATTGTGCCCTCCCCCAAAGTTATTGCAAAATGACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR TCA 90 bp | ATCTCTGCAGGTATTTCTTCTCCCACTGAGGTGAGATATTGCAGCCCAGTCTGGCTTTGGAATAGTAGTTaGAATGAAACAGATGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ISAGISSPTEVRYCSPVWLWNSS*NETDVH Trigger: GTGGACATCTGTTTCATTTCAACTACTATTCCAAAG...CCAGACTGGGCTGCAATATCTCACCTCAGTGGGAGAAGAAATACCTGCAGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR TCA 90 bp | CAGACAGGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACCTTTGGAATAGTAGTTaGAATGAAACAGATGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: QTGNSFNHSHYSNCWGIHLWNSS*NETDVH Trigger: GTGGACATCTGTTTCATTTCAACTACTATTCCAAAG...GTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCCTGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR GCA 90 bp | GTGTCATTTTGCAATAACTTTGGGGGAGGGCACAATGAAGATTGTTTCAGTAACAAATACATGGGGGTATaGAGTCGGGGGCCTGAAATA | + |
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Preference number: 4 (lower is better) Translates to: VSFCNNFGGGHNEDCFSNKYMGV*SRGPEI Trigger: TATTTCAGGCCCCCGACTGCATACCCCCATGTATTT...GTTACTGAAACAATCTTCATTGTGCCCTCCCCCAAAGTTATTGCAAAATGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CCA 90 bp | GTGTCATTTTGCAATAACTTTGGGGGAGGGCACAATGAAGATTGTTTCAGTAACCTTGTTTGTGACCCATaGTTTGCAGCAGAACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VSFCNNFGGGHNEDCFSNLVCDP*FAAELR Trigger: CCTCAGTTCTGCTGCAAACCATGGGTCACAAACAAG...GTTACTGAAACAATCTTCATTGTGCCCTCCCCCAAAGTTATTGCAAAATGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR GCA 90 bp | ACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACATGGAGACTGAAGAAGAAGAAATTCTaGAACTCTTGTCCTGTTACT | + |
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Preference number: 4 (lower is better) Translates to: TALITATTPIVGGSTWRLKKKKF*NSCPVT Trigger: AGTAACAGGACAAGAGTTGCAGAATTTCTTCTTCTT...CAGTCTCCATGTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CCA 90 bp | GGATCCACATGGAGACTGAGCTACACATCTGCTACATATATGTCAAGAGCCTTGGTGATGACCTTGTTTTaGGTCTGTATGTTTACTAAC | + |
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Preference number: 4 (lower is better) Translates to: GSTWRLSYTSATYMSRALVMTLF*VCMFTN Trigger: GTTAGTAAACATACAGACCCAAAACAAGGTCATCAC...CAAGGCTCTTGACATATATGTAGCAGATGTGTAGCTCAGTCTCCATGTGGATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CCA 90 bp | ACATGGAGACTGAGCTACACATCTGCTACATATATGTCAAGAGCCTTGGTCAAGGTGATGACCTTGTTTTaGGTCTGTATGTTTACTAAC | + |
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Preference number: 4 (lower is better) Translates to: TWRLSYTSATYMSRALVKVMTLF*VCMFTN Trigger: GTTAGTAAACATACAGACCCAAAACAAGGTCATCAC...CTTGACCAAGGCTCTTGACATATATGTAGCAGATGTGTAGCTCAGTCTCCATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR GCA 90 bp | GTGTCATTTTGCAATAACTTTGGGGGAGGGCACAATGAAGATTGTTTCAGTAACAAGAAGAAGAAATTCTaGAACTCTTGTCCTGTTACT | + |
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Preference number: 4 (lower is better) Translates to: VSFCNNFGGGHNEDCFSNKKKKF*NSCPVT Trigger: AGTAACAGGACAAGAGTTGCAGAATTTCTTCTTCTT...GTTACTGAAACAATCTTCATTGTGCCCTCCCCCAAAGTTATTGCAAAATGACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CAA 90 bp | GTAGATTGCTCATGCTCCAGTGGAAGGCCACATGCTTATAGGCACCATAAACTGCTGAGGCTGTTGCACTaGTTTGTGACCCATGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: VDCSCSSGRPHAYRHHKLLRLLH*FVTHGL Trigger: CAAACCATGGGTCACAAACAAGTGCAACAGCCTCAG...CAGTTTATGGTGCCTATAAGCATGTGGCCTTCCACTGGAGCATGAGCAATCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CAA 90 bp | GGATCCACATGGAGACTGAGCTACACATCTGCTACATATATGTCAAGAGCCTTGCTGAGGCTGTTGCACTaGTTTGTGACCCATGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: GSTWRLSYTSATYMSRALLRLLH*FVTHGL Trigger: CAAACCATGGGTCACAAACAAGTGCAACAGCCTCAG...CAAGGCTCTTGACATATATGTAGCAGATGTGTAGCTCAGTCTCCATGTGGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CAA 90 bp | ATCTCTGCAGGTATTTCTTCTCCCACTGAGGTGAGATATTGCAGCCCAGTCTGGGAAATTCTGCAACTCTaGTCCTGTTACTTGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: ISAGISSPTEVRYCSPVWEILQL*SCYLSP Trigger: TGGACTCAAGTAACAGGACAAGAGTTGCAGAATTTC...CCAGACTGGGCTGCAATATCTCACCTCAGTGGGAGAAGAAATACCTGCAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CAA 90 bp | ATCTCTGCAGGTATTTCTTCTCCCACTGAGGTGAGATATTGCAGCCCAGTCTGGATAGTGAGCAAGAAGTaGTCCAATTCCACAAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: ISAGISSPTEVRYCSPVWIVSKK*SNSTKS Trigger: GCTTTTTGTGGAATTGGACAACTTCTTGCTCACTAT...CCAGACTGGGCTGCAATATCTCACCTCAGTGGGAGAAGAAATACCTGCAGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CAA 90 bp | GGATCCACATGGAGACTGAGCTACACATCTGCTACATATATGTCAAGAGCCTTGGAAATTCTGCAACTCTaGTCCTGTTACTTGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: GSTWRLSYTSATYMSRALEILQL*SCYLSP Trigger: TGGACTCAAGTAACAGGACAAGAGTTGCAGAATTTC...CAAGGCTCTTGACATATATGTAGCAGATGTGTAGCTCAGTCTCCATGTGGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CAA 90 bp | ATCTCTGCAGGTATTTCTTCTCCCACTGAGGTGAGATATTGCAGCCCAGTCTGGATGGGTTGCAGGTCTTaGTTTTCTAAAAATCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: ISAGISSPTEVRYCSPVWMGCRS*FSKNPR Trigger: TCTTGGATTTTTAGAAAACAAAGACCTGCAACCCAT...CCAGACTGGGCTGCAATATCTCACCTCAGTGGGAGAAGAAATACCTGCAGAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CAA 90 bp | CAGACAGGCAACAGCTTTAATCACAGCCACTACTCCAATTGTTGGGGGATCCACATGGGTTGCAGGTCTTaGTTTTCTAAAAATCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: QTGNSFNHSHYSNCWGIHMGCRS*FSKNPR Trigger: TCTTGGATTTTTAGAAAACAAAGACCTGCAACCCAT...GTGGATCCCCCAACAATTGGAGTAGTGGCTGTGATTAAAGCTGTTGCCTGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CAA 90 bp | GGATCCACATGGAGACTGAGCTACACATCTGCTACATATATGTCAAGAGCCTTGATCAGAACAAGTGAGTaGAATCACCTGATTAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: GSTWRLSYTSATYMSRALIRTSE*NHLIRF Trigger: GAACCTAATCAGGTGATTCAACTCACTTGTTCTGAT...CAAGGCTCTTGACATATATGTAGCAGATGTGTAGCTCAGTCTCCATGTGGATCC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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| CDS-3UTR CAA 90 bp | GTGTCATTTTGCAATAACTTTGGGGGAGGGCACAATGAAGATTGTTTCAGTAACATCAGAACAAGTGAGTaGAATCACCTGATTAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: VSFCNNFGGGHNEDCFSNIRTSE*NHLIRF Trigger: GAACCTAATCAGGTGATTCAACTCACTTGTTCTGAT...GTTACTGAAACAATCTTCATTGTGCCCTCCCCCAAAGTTATTGCAAAATGACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039718.9 ENSMUST00000205193.3 |
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