Pregenerated sensors for OLFR1350 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056696Ensembl transcript IDs: ENSMUST00000070985.4, ENSMUST00000207221.3, ENSMUST00000219278.2
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTTCACTTCAGCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCTaGGCCCCTGCGCAAAATGCTGGCAGCTACCTCAAGTCTGTTTGC | + |
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Preference number: 1 (lower is better) Translates to: ASLQHGQSLGKAVLL*APAQNAGSYLKSVC Trigger: GCAAACAGACTTGAGGTAGCTGCCAGCATTTTGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGAAGTGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR GCA 90 bp | TCAGCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTaGGCAAAATGCTGGCAGCTACCTCAAGTCTGTTTGCTTAACCTT | + |
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Preference number: 1 (lower is better) Translates to: SAWPESWESCVTLGP*AKCWQLPQVCLLNL Trigger: AAGGTTAAGCAAACAGACTTGAGGTAGCTGCCAGCATTTTGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR CCA 90 bp | TACAGCAGCATTGTTGTGGGGTTAAGTAGGGGAATGTGGACACCTTaGGCAGCAGCTTCACTTCAGCATGGCCAGAGTCTTGGGAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: YSSIVVGLSRGMWTP*AAASLQHGQSLGKA Trigger: AGCTTTCCCAAGACTCTGGCCATGCTGAAGTGAAGCTGCTGCCCAAGGTGTCCACATTCCCCTACTTAACCCCACAACAATGCTGCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR GCA 90 bp | CCAGAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTGCGCAAAATaGTGGCAGCTACCTCAAGTCTGTTTGCTTAACCTTTGTGAGTGT | + |
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Preference number: 1 (lower is better) Translates to: PESWESCVTLGPCAK*WQLPQVCLLNLCEC Trigger: ACACTCACAAAGGTTAAGCAAACAGACTTGAGGTAGCTGCCAGCATTTTGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR CCA 90 bp | GAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTGCGCAAAATGCTaGCAGCTACCTCAAGTCTGTTTGCTTAACCTTTGTGAGTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: ESWESCVTLGPCAKC*QLPQVCLLNLCECL Trigger: AAGACACTCACAAAGGTTAAGCAAACAGACTTGAGGTAGCTGCCAGCATTTTGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR CCA 90 bp | CTAATAAGTAAACAGTTTACCTTGGCCCCTAAAAAGCAACACAAGTaGCCAGTAACTATTCCAGAGAGTAACAGTGGCCTTTCTGATGGT | + |
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Preference number: 1 (lower is better) Translates to: LISKQFTLAPKKQHK*PVTIPESNSGLSDG Trigger: ACCATCAGAAAGGCCACTGTTACTCTCTGGAATAGTTACTGGCCACTTGTGTTGCTTTTTAGGGGCCAAGGTAAACTGTTTACTTATTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR-3UTR GCA 90 bp | AATGTGGACACCTTGGGCAGCAGCTTCACTTCAGCATGGCCAGAGTCTTGGGAATACCTCAAGTCTGTTTaGTTAACCTTTGTGAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: NVDTLGSSFTSAWPESWEYLKSV*LTFVSV Trigger: GACACTCACAAAGGTTAAGCAAACAGACTTGAGGTA...TTCCCAAGACTCTGGCCATGCTGAAGTGAAGCTGCTGCCCAAGGTGTCCACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCCACATGTTTCAGTCTGGAGGAAACAGAAACACTAGAAAGTGGGCAGCCAAAAAGCAACACAAGTaGCCAGTAACTATTCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PGHMFQSGGNRNTRKWAAKKQHK*PVTIPE Trigger: CTCTGGAATAGTTACTGGCCACTTGTGTTGCTTTTT...GGCTGCCCACTTTCTAGTGTTTCTGTTTCCTCCAGACTGAAACATGTGGCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGAATTACAGCAGCATTGTTGTGGGGTTAAGTAGGGGAATGTGGACACCTAGAAACACTAGAAAGTaGGCAGCCATGGAAGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: RVNYSSIVVGLSRGMWTPRNTRK*AAMEVN Trigger: GTTTACTTCCATGGCTGCCCACTTTCTAGTGTTTCT...AGGTGTCCACATTCCCCTACTTAACCCCACAACAATGCTGCTGTAATTCACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR-3UTR TCA 90 bp | TTTATTAGAGTGAATTACAGCAGCATTGTTGTGGGGTTAAGTAGGGGAATGTGGCTTCTAAGTTTCTTGTaGGTGCCTCAAGCCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: FIRVNYSSIVVGLSRGMWLLSFL*VPQAIS Trigger: GGAGATGGCTTGAGGCACTCACAAGAAACTTAGAAG...CCACATTCCCCTACTTAACCCCACAACAATGCTGCTGTAATTCACTCTAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR GCA 72 bp | CCAGAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTaGGCAAAATGCTGGCAGCTACCTCAAGTCTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PESWESCVTLGP*AKCWQLPQVCL Trigger: CAAACAGACTTGAGGTAGCTGCCAGCATTTTGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR CCA 72 bp | ATTGTTGTGGGGTTAAGTAGGGGAATGTGGACACCTTaGGCAGCAGCTTCACTTCAGCATGGCCAGAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: IVVGLSRGMWTP*AAASLQHGQSL Trigger: AAGACTCTGGCCATGCTGAAGTGAAGCTGCTGCCCAAGGTGTCCACATTCCCCTACTTAACCCCACAACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGCAGCAGCTTCACTTCAGCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCCTACCTCAAGTCTGTTaGCTTAACCTTTGTGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: WAAASLQHGQSLGKAVLLLPQVC*LNLCEC Trigger: ACACTCACAAAGGTTAAGCAAACAGACTTGAGGTAG...GAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGAAGTGAAGCTGCTGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGTGAATTACAGCAGCATTGTTGTGGGGTTAAGTAGGGGAATGTGGACACCTAGCATGGCCAGAGTCTaGGGAAAGCTGTGTTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: RVNYSSIVVGLSRGMWTPSMARV*GKLCYS Trigger: AGAGTAACACAGCTTTCCCAAGACTCTGGCCATGCT...AGGTGTCCACATTCCCCTACTTAACCCCACAACAATGCTGCTGTAATTCACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR CCA 72 bp | ATGGTCTTCAGCATGGTTTCAAGAGGGAAAGTAAGCTaGTTTCTGGAACTTCCCGTGTCTAAGTGTCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: MVFSMVSRGKVS*FLELPVSKCQD Trigger: ATCCTGACACTTAGACACGGGAAGTTCCAGAAACCAGCTTACTTTCCCTCTTGAAACCATGCTGAAGACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR CCA 72 bp | ATGTTTCAGTCTGGAGGAAACAGAAACACTAGAAAGTaGGCAGCCATGGAAGTAAACTACCAGTCAACACAT | + |
|
Preference number: 3 (lower is better) Translates to: MFQSGGNRNTRK*AAMEVNYQSTH Trigger: ATGTGTTGACTGGTAGTTTACTTCCATGGCTGCCCACTTTCTAGTGTTTCTGTTTCCTCCAGACTGAAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | CTTCAGCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTGCGCAAGCAGCCTCATGGCCTTaGGTGTCACCACAAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQHGQSLGKAVLLWAPAQAASWP*VSPQAR Trigger: TCTAGCTTGTGGTGACACCCAAGGCCATGAGGCTGC...TTGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| 3UTR CAA 72 bp | CTTGGGCAGCAGCTTCACTTCAGCATGGCCAGAGTCTaGGGAAAGCTGTGTTACTCTGGGCCCCTGCGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LGQQLHFSMARV*GKLCYSGPLRK Trigger: TTTGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGAAGTGAAGCTGCTGCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR TCA 90 bp | TGGGCAGCAGCTTCACTTCAGCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCCCGCAGCCAGGTATATaGGAAGAAAGATGGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: WAAASLQHGQSLGKAVLLPQPGI*EERWPC Trigger: GCATGGCCATCTTTCTTCTCATATACCTGGCTGCGG...GAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGAAGTGAAGCTGCTGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | TTCACTTCAGCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTGCATGGGTGTGTGCAGATaGGAGTCAAGAGTCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: FTSAWPESWESCVTLGPCMGVCR*ESRVTA Trigger: AGCTGTGACTCTTGACTCCCATCTGCACACACCCAT...GCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGAAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | TTCACTTCAGCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTGCAAAACAGAAGCACTGTaGCCAGATGGGAGGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: FTSAWPESWESCVTLGPCKTEAL*PDGRNT Trigger: CGTGTTCCTCCCATCTGGCCACAGTGCTTCTGTTTT...GCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGAAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR TCA 90 bp | CTTCAGCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTGCGCAAGCTGCAGAACGGATGTaGACCACTGTGTATACAATA | + |
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Preference number: 4 (lower is better) Translates to: LQHGQSLGKAVLLWAPAQAAERM*TTVYTI Trigger: TATTGTATACACAGTGGTTCACATCCGTTCTGCAGC...TTGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR GCA 90 bp | GCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTGCGCAAAATGCAGGCTGAACTTCCAGTaGCATAAAACAGAAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: AWPESWESCVTLGPCAKCRLNFQ*HKTEAL Trigger: CAGTGCTTCTGTTTTATGGCACTGGAAGTTCAGCCT...GCATTTTGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGGCCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | GAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTGCGCAAAATGCTGGCAGCTATTGAGATGCACAGGCTaGGAGGGATATCTCTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: ESWESCVTLGPCAKCWQLLRCTG*EGYLFG Trigger: ACCAAAGAGATATCCCTCCCAGCCTGTGCATCTCAA...TAGCTGCCAGCATTTTGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR TCA 90 bp | GAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTGCGCAAAATGCTGGCAGCTAGCTGCAGAACGGATGTaGACCACTGTGTATACAATA | + |
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Preference number: 4 (lower is better) Translates to: ESWESCVTLGPCAKCWQLAAERM*TTVYTI Trigger: TATTGTATACACAGTGGTTCACATCCGTTCTGCAGC...TAGCTGCCAGCATTTTGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR GCA 90 bp | TTCACTTCAGCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTGCGAAGAAAGATGGCCATaGTCAGCAACTGTAATGCAG | + |
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Preference number: 4 (lower is better) Translates to: FTSAWPESWESCVTLGPCEERWP*SATVMQ Trigger: CTGCATTACAGTTGCTGAGCATGGCCATCTTTCTTC...GCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGAAGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCCACATGTTTCAGTCTGGAGGAAACAGAAACACTAGAAAGTGGGCAGCCAAAACAGAAGCACTGTaGCCAGATGGGAGGAACACG | + |
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Preference number: 4 (lower is better) Translates to: PGHMFQSGGNRNTRKWAAKTEAL*PDGRNT Trigger: CGTGTTCCTCCCATCTGGCCACAGTGCTTCTGTTTT...GGCTGCCCACTTTCTAGTGTTTCTGTTTCCTCCAGACTGAAACATGTGGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR GCA 90 bp | AATGTGGACACCTTGGGCAGCAGCTTCACTTCAGCATGGCCAGAGTCTTGGGAAACTAACTATAAAACCTaGAGCCTCATGGCCTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: NVDTLGSSFTSAWPESWETNYKT*SLMALG Trigger: ACCCAAGGCCATGAGGCTGCAGGTTTTATAGTTAGT...TTCCCAAGACTCTGGCCATGCTGAAGTGAAGCTGCTGCCCAAGGTGTCCACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | GGGCTAATAAGTAAACAGTTTACCTTGGCCCCTAAAAAGCAACACAAGTGGCCAGGGAGTAGTGGGCTGTaGGCTGCATGTAGGCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GLISKQFTLAPKKQHKWPGSSGL*AACRLN Trigger: GTTCAGCCTACATGCAGCCCACAGCCCACTACTCCC...TGGCCACTTGTGTTGCTTTTTAGGGGCCAAGGTAAACTGTTTACTTATTAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | GTAACTATTCCAGAGAGTAACAGTGGCCTTTCTGATGGTCTTCAGCATGGTTTCGGGAGTAGTGGGCTGTaGGCTGCATGTAGGCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: VTIPESNSGLSDGLQHGFGSSGL*AACRLN Trigger: GTTCAGCCTACATGCAGCCCACAGCCCACTACTCCC...GAAACCATGCTGAAGACCATCAGAAAGGCCACTGTTACTCTCTGGAATAGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR TCA 90 bp | ACTATTCCAGAGAGTAACAGTGGCCTTTCTGATGGTCTTCAGCATGGTTTCAAGAAAAGAGGAGTCCACTaGCCCAGGCCACCACTACCA | + |
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Preference number: 4 (lower is better) Translates to: TIPESNSGLSDGLQHGFKKRGVH*PRPPLP Trigger: TGGTAGTGGTGGCCTGGGTCAGTGGACTCCTCTTTT...CTTGAAACCATGCTGAAGACCATCAGAAAGGCCACTGTTACTCTCTGGAATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | GGGCTAATAAGTAAACAGTTTACCTTGGCCCCTAAAAAGCAACACAAGTGGCCAGCAGCCTCATGGCCTTaGGTGTCACCACAAGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: GLISKQFTLAPKKQHKWPAASWP*VSPQAR Trigger: TCTAGCTTGTGGTGACACCCAAGGCCATGAGGCTGC...TGGCCACTTGTGTTGCTTTTTAGGGGCCAAGGTAAACTGTTTACTTATTAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR TCA 90 bp | TCTGGAGGAAACAGAAACACTAGAAAGTGGGCAGCCATGGAAGTAAACTACCAGAGAAGCCCTGGAGAATaGACACAGACACTGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SGGNRNTRKWAAMEVNYQRSPGE*TQTLWR Trigger: TCTCCACAGTGTCTGTGTTCATTCTCCAGGGCTTCT...CTGGTAGTTTACTTCCATGGCTGCCCACTTTCTAGTGTTTCTGTTTCCTCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR TCA 90 bp | ACTATTCCAGAGAGTAACAGTGGCCTTTCTGATGGTCTTCAGCATGGTTTCAAGCCGCAGCCAGGTATATaGGAAGAAAGATGGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: TIPESNSGLSDGLQHGFKPQPGI*EERWPC Trigger: GCATGGCCATCTTTCTTCTCATATACCTGGCTGCGG...CTTGAAACCATGCTGAAGACCATCAGAAAGGCCACTGTTACTCTCTGGAATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR TCA 90 bp | CTATTCCAGAGAGTAACAGTGGCCTTTCTGATGGTCTTCAGCATGGTTTCAAGAAGAAGCCCTGGAGAATaGACACAGACACTGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LFQRVTVAFLMVFSMVSRRSPGE*TQTLWR Trigger: TCTCCACAGTGTCTGTGTTCATTCTCCAGGGCTTCT...TCTTGAAACCATGCTGAAGACCATCAGAAAGGCCACTGTTACTCTCTGGAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR GCA 90 bp | CCAGAGAGTAACAGTGGCCTTTCTGATGGTCTTCAGCATGGTTTCAAGAGGGAAGAAGAAAGATGGCCATaGTCAGCAACTGTAATGCAG | + |
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Preference number: 4 (lower is better) Translates to: PESNSGLSDGLQHGFKREEERWP*SATVMQ Trigger: CTGCATTACAGTTGCTGAGCATGGCCATCTTTCTTC...TTCCCTCTTGAAACCATGCTGAAGACCATCAGAAAGGCCACTGTTACTCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR GCA 90 bp | CTTCAGCATGGTTTCAAGAGGGAAAGTAAGCTGGTTTCTGGAACTTCCCGTGTCACTAACTATAAAACCTaGAGCCTCATGGCCTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LQHGFKRESKLVSGTSRVTNYKT*SLMALG Trigger: ACCCAAGGCCATGAGGCTGCAGGTTTTATAGTTAGT...GACACGGGAAGTTCCAGAAACCAGCTTACTTTCCCTCTTGAAACCATGCTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | ACTAGAAAGTGGGCAGCCATGGAAGTAAACTACCAGTCAACACATGGGCTAATAATGGGTGTGTGCAGATaGGAGTCAAGAGTCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: TRKWAAMEVNYQSTHGLIMGVCR*ESRVTA Trigger: AGCTGTGACTCTTGACTCCCATCTGCACACACCCAT...TATTAGCCCATGTGTTGACTGGTAGTTTACTTCCATGGCTGCCCACTTTCTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR GCA 90 bp | AACAGTGGCCTTTCTGATGGTCTTCAGCATGGTTTCAAGAGGGAAAGTAAGCTGAAGCTTCCGCAGAGCTaGTTTCATGTCCTTGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: NSGLSDGLQHGFKRESKLKLPQS*FHVLVS Trigger: AGAAACAAGGACATGAAAGCAGCTCTGCGGAAGCTT...CAGCTTACTTTCCCTCTTGAAACCATGCTGAAGACCATCAGAAAGGCCACTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | CTATTCCAGAGAGTAACAGTGGCCTTTCTGATGGTCTTCAGCATGGTTTCAAGATTGAGATGCACAGGCTaGGAGGGATATCTCTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: LFQRVTVAFLMVFSMVSRLRCTG*EGYLFG Trigger: ACCAAAGAGATATCCCTCCCAGCCTGTGCATCTCAA...TCTTGAAACCATGCTGAAGACCATCAGAAAGGCCACTGTTACTCTCTGGAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR GCA 90 bp | AACAGAAACACTAGAAAGTGGGCAGCCATGGAAGTAAACTACCAGTCAACACATAAGCTTCCGCAGAGCTaGTTTCATGTCCTTGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: NRNTRKWAAMEVNYQSTHKLPQS*FHVLVS Trigger: AGAAACAAGGACATGAAAGCAGCTCTGCGGAAGCTT...ATGTGTTGACTGGTAGTTTACTTCCATGGCTGCCCACTTTCTAGTGTTTCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | CTTCAGCATGGTTTCAAGAGGGAAAGTAAGCTGGTTTCTGGAACTTCCCGTGTCAAGTGGATTCAGAGTTaGCATGAGGATAGAATAGAA | + |
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Preference number: 4 (lower is better) Translates to: LQHGFKRESKLVSGTSRVKWIQS*HEDRIE Trigger: TTCTATTCTATCCTCATGCCAACTCTGAATCCACTT...GACACGGGAAGTTCCAGAAACCAGCTTACTTTCCCTCTTGAAACCATGCTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | GGGCTAATAAGTAAACAGTTTACCTTGGCCCCTAAAAAGCAACACAAGTGGCCAAAAGTGTTGACCATGTaGAAGGTAGAAAAGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GLISKQFTLAPKKQHKWPKVLTM*KVEKRS Trigger: ACTCCTCTTTTCTACCTTCCACATGGTCAACACTTT...TGGCCACTTGTGTTGCTTTTTAGGGGCCAAGGTAAACTGTTTACTTATTAGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CCA 90 bp | CAGTTTACCTTGGCCCCTAAAAAGCAACACAAGTGGCCAGTAACTATTCCAGAGAAGTGGATTCAGAGTTaGCATGAGGATAGAATAGAA | + |
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Preference number: 4 (lower is better) Translates to: QFTLAPKKQHKWPVTIPEKWIQS*HEDRIE Trigger: TTCTATTCTATCCTCATGCCAACTCTGAATCCACTT...CTCTGGAATAGTTACTGGCCACTTGTGTTGCTTTTTAGGGGCCAAGGTAAACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS TCA 90 bp | GCGCCCTTGCAGTGGGGAGTAGTGGGCTGTGGGCTGCATGTAGGCTaGACTTCCAGTGCCATAAAACAGAAGCACTGTGGCCAGATGGGA | + |
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Preference number: 5 (lower is better) Translates to: APLQWGVVGCGLHVG*TSSAIKQKHCGQMG Trigger: TCCCATCTGGCCACAGTGCTTCTGTTTTATGGCACTGGAAGTTCAGCCTACATGCAGCCCACAGCCCACTACTCCCCACTGCAAGGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070985.4 ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS GCA 90 bp | AAAGAGTTGAGATGCACAGGCTGGGAGGGATATCTCTTTGGTGTCTaGCATGGTAGCCACCAGGGCCCGAGGCAGGGTGGTGGATGTAGA | + |
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Preference number: 5 (lower is better) Translates to: KELRCTGWEGYLFGV*HGSHQGPRQGGGCR Trigger: TCTACATCCACCACCCTGCCTCGGGCCCTGGTGGCTACCATGGCAGACACCAAAGAGATATCCCTCCCAGCCTGTGCATCTCAACTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070985.4 ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS CCA 90 bp | AGAATATGGCGGCCATGCGCCCTTGCAGTGGGGAGTAGTGGGCTGTaGGCTGCATGTAGGCTGAACTTCCAGTGCCATAAAACAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: RIWRPCALAVGSSGL*AACRLNFQCHKTEA Trigger: TGCTTCTGTTTTATGGCACTGGAAGTTCAGCCTACATGCAGCCCACAGCCCACTACTCCCCACTGCAAGGGCGCATGGCCGCCATATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070985.4 ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CAA 90 bp | ACTTCAGCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTGCGCAGACAAAAGCAAAGAGTaGAGATGCACAGGCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: TSAWPESWESCVTLGPCADKSKE*RCTGWE Trigger: CTCCCAGCCTGTGCATCTCAACTCTTTGCTTTTGTC...TGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS CCA 90 bp | ATCATGTTGGGACCACAGAAGGGCAAGGAGAAAGTGTTGACCATGTaGAAGGTAGAAAAGAGGAGTCCACTGACCCAGGCCACCACTACC | + |
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Preference number: 5 (lower is better) Translates to: IMLGPQKGKEKVLTM*KVEKRSPLTQATTT Trigger: GGTAGTGGTGGCCTGGGTCAGTGGACTCCTCTTTTCTACCTTCCACATGGTCAACACTTTCTCCTTGCCCTTCTGTGGTCCCAACATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070985.4 ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CAA 90 bp | TGGGCAGCAGCTTCACTTCAGCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCGACAAAAGCAAAGAGTaGAGATGCACAGGCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: WAAASLQHGQSLGKAVLLDKSKE*RCTGWE Trigger: CTCCCAGCCTGTGCATCTCAACTCTTTGCTTTTGTC...GAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGAAGTGAAGCTGCTGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CAA 90 bp | TTCAGCATGGCCAGAGTCTTGGGAAAGCTGTGTTACTCTGGGCCCCTGCGCAAAGGCAAGGAGAAAGTGTaGACCATGTGGAAGGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: FSMARVLGKLCYSGPLRKGKEKV*TMWKVE Trigger: TTCTACCTTCCACATGGTCAACACTTTCTCCTTGCC...TTTGCGCAGGGGCCCAGAGTAACACAGCTTTCCCAAGACTCTGGCCATGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS-3UTR CAA 90 bp | ACTAGAAAGTGGGCAGCCATGGAAGTAAACTACCAGTCAACACATGGGCTAATAGGCAAGGAGAAAGTGTaGACCATGTGGAAGGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: TRKWAAMEVNYQSTHGLIGKEKV*TMWKVE Trigger: TTCTACCTTCCACATGGTCAACACTTTCTCCTTGCC...TATTAGCCCATGTGTTGACTGGTAGTTTACTTCCATGGCTGCCCACTTTCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS GCA 72 bp | AGATGCACAGGCTGGGAGGGATATCTCTTTGGTGTCTaGCATGGTAGCCACCAGGGCCCGAGGCAGGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: RCTGWEGYLFGV*HGSHQGPRQGG Trigger: ACCACCCTGCCTCGGGCCCTGGTGGCTACCATGGCAGACACCAAAGAGATATCCCTCCCAGCCTGTGCATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070985.4 ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS CCA 72 bp | CGGCCATGCGCCCTTGCAGTGGGGAGTAGTGGGCTGTaGGCTGCATGTAGGCTGAACTTCCAGTGCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: RPCALAVGSSGL*AACRLNFQCHK Trigger: TTTATGGCACTGGAAGTTCAGCCTACATGCAGCCCACAGCCCACTACTCCCCACTGCAAGGGCGCATGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070985.4 ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS TCA 72 bp | CTGACCCAGGCCACCACTACCAGGGACACACAGGTCTaGGAACTCATGGTTACCCCATATGTCAGGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LTQATTTRDTQV*ELMVTPYVRGL Trigger: CAGACCCCTGACATATGGGGTAACCATGAGTTCTCAGACCTGTGTGTCCCTGGTAGTGGTGGCCTGGGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070985.4 ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS TCA 72 bp | CAGTGGGGAGTAGTGGGCTGTGGGCTGCATGTAGGCTaGACTTCCAGTGCCATAAAACAGAAGCACTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QWGVVGCGLHVG*TSSAIKQKHCG Trigger: GCCACAGTGCTTCTGTTTTATGGCACTGGAAGTTCAGCCTACATGCAGCCCACAGCCCACTACTCCCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070985.4 ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS CAA 72 bp | CATGAGGATAGAATAGAATATGGCGGCCATGCGCCCTaGCAGTGGGGAGTAGTGGGCTGTGGGCTGCATGTA | + |
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Preference number: 6 (lower is better) Translates to: HEDRIEYGGHAP*QWGVVGCGLHV Trigger: TACATGCAGCCCACAGCCCACTACTCCCCACTGCAAGGGCGCATGGCCGCCATATTCTATTCTATCCTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070985.4 ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS CCA 72 bp | CCACCACTACCAGGGACACACAGGTCTGAGAACTCATaGTTACCCCATATGTCAGGGGTCTGTAGATGGCTA | + |
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Preference number: 6 (lower is better) Translates to: PPLPGTHRSENS*LPHMSGVCRWL Trigger: TAGCCATCTACAGACCCCTGACATATGGGGTAACCATGAGTTCTCAGACCTGTGTGTCCCTGGTAGTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070985.4 ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS CCA 72 bp | CTCAGCAACTGTAATGCAGGAACAGCAGAGAAGCCCTaGAGAATGAACACAGACACTGTGGAGAGATTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSNCNAGTAEKP*RMNTDTVERLA Trigger: GGCCAATCTCTCCACAGTGTCTGTGTTCATTCTCCAGGGCTTCTCTGCTGTTCCTGCATTACAGTTGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070985.4 ENSMUST00000207221.3 ENSMUST00000219278.2 |
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| CDS CCA 72 bp | ATGACACATCCACTAACTATAAAACCTGCAGCCTCATaGCCTTGGGTGTCACCACAAGCTAGATGCATGAGT | + |
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Preference number: 6 (lower is better) Translates to: MTHPLTIKPAAS*PWVSPQARCMS Trigger: ACTCATGCATCTAGCTTGTGGTGACACCCAAGGCCATGAGGCTGCAGGTTTTATAGTTAGTGGATGTGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070985.4 ENSMUST00000207221.3 ENSMUST00000219278.2 |
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