Pregenerated sensors for OLFR1349 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048067Ensembl transcript IDs: ENSMUST00000051982.6, ENSMUST00000207043.2, ENSMUST00000207075.2, ENSMUST00000207820.3, ENSMUST00000213504.2, ENSMUST00000213656.2, ENSMUST00000216447.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTCTTACATTTCAGCTACTGTAATGAAAAGCCATTCCTGCTCTTaGGTCTCAAGAGACGTATATGAACCAAAGCATCTTCAGCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: PSYISATVMKSHSCS*VSRDVYEPKHLQLN Trigger: ATTCAGCTGAAGATGCTTTGGTTCATATACGTCTCTTGAGACCCAAGAGCAGGAATGGCTTTTCATTACAGTAGCTGAAATGTAAGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR TCA 90 bp | ATGTCTCCAGTTCCTCAATTCCTCTATGAAGGTTATAAACTTAGATaGAACTTTAGCCTCCTTCATATAAAGGCTGAGAGTTATCGGCTG | + |
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Preference number: 1 (lower is better) Translates to: MSPVPQFLYEGYKLR*NFSLLHIKAESYRL Trigger: CAGCCGATAACTCTCAGCCTTTATATGAAGGAGGCTAAAGTTTCATCTAAGTTTATAACCTTCATAGAGGAATTGAGGAACTGGAGACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGGCAGAGACAGGTGGATTTCTGAGTTTGAGGACAGCCTGGGCTACAGAGTCTGACGCTGAAAGCTaGCAGAGGAGAGAGTTCATT | + |
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Preference number: 2 (lower is better) Translates to: WEAETGGFLSLRTAWATESDAES*QRREFI Trigger: AATGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGA...CTCTGTAGCCCAGGCTGTCCTCAAACTCAGAAATCCACCTGTCTCTGCCTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGGCAGAGACAGGTGGATTTCTGAGTTTGAGGACAGCCTGGGCTACAGAGGGGTTTGGATTGTCTTaGAATTCCTCATTCCTCATG | + |
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Preference number: 2 (lower is better) Translates to: WEAETGGFLSLRTAWATEGFGLS*NSSFLM Trigger: CATGAGGAATGAGGAATTGCAAGACAATCCAAACCC...CTCTGTAGCCCAGGCTGTCCTCAAACTCAGAAATCCACCTGTCTCTGCCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGGCAGAGACAGGTGGATTTCTGAGTTTGAGGACAGCCTGGGCTACAGAGCAAAGCATCTTCAGCTaGATCATACTAACATTGATC | + |
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Preference number: 2 (lower is better) Translates to: WEAETGGFLSLRTAWATEQSIFS*IILTLI Trigger: GATCAATGTTAGTATGATTCAGCTGAAGATGCTTTG...CTCTGTAGCCCAGGCTGTCCTCAAACTCAGAAATCCACCTGTCTCTGCCTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR CAA 90 bp | CCCATAGGGTTTGGATTGTCTTGCAATTCCTCATTCCTCATGCAATaGGGTCTACCCTCTTACATTTCAGCTACTGTAATGAAAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PIGFGLSCNSSFLMQ*GLPSYISATVMKSH Trigger: ATGGCTTTTCATTACAGTAGCTGAAATGTAAGAGGGTAGACCCAATTGCATGAGGAATGAGGAATTGCAAGACAATCCAAACCCTATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGAAATATCGAGATCTGGCTTTCTGAAGGTTGCTTTGTTAATGTCTCCAGTTATGAAAAGCCATTCCTaGTCTTGGGTCTCAAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: KEISRSGFLKVALLMSPVMKSHS*SWVSRD Trigger: GTCTCTTGAGACCCAAGAGCAGGAATGGCTTTTCAT...AACTGGAGACATTAACAAAGCAACCTTCAGAAAGCCAGATCTCGATATTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGAGACGTATATGAACCAAAGCATCTTCAGCTGAATCATACTAACATTGATTCTGACGCTGAAAGCTaGCAGAGGAGAGAGTTCATT | + |
|
Preference number: 2 (lower is better) Translates to: SRDVYEPKHLQLNHTNIDSDAES*QRREFI Trigger: AATGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGA...ATCAATGTTAGTATGATTCAGCTGAAGATGCTTTGGTTCATATACGTCTCTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAGAGACGTATATGAACCAAAGCATCTTCAGCTGAATCATACTAACATTGATCAGAATTTGCTGTTCTaGATTCTCTTAGGTAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SRDVYEPKHLQLNHTNIDQNLLF*ILLGRE Trigger: TTCTCTACCTAAGAGAATGCAGAACAGCAAATTCTG...ATCAATGTTAGTATGATTCAGCTGAAGATGCTTTGGTTCATATACGTCTCTTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGAGGCAGAGACAGGTGGATTTCTGAGTTTGAGGACAGCCTGGGCTACAGAGCCCATAGGGTTTGGATaGTCTTGCAATTCCTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: WEAETGGFLSLRTAWATEPIGFG*SCNSSF Trigger: GAATGAGGAATTGCAAGACAATCCAAACCCTATGGG...CTCTGTAGCCCAGGCTGTCCTCAAACTCAGAAATCCACCTGTCTCTGCCTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR CCA 72 bp | ATTTCAGCTACTGTAATGAAAAGCCATTCCTGCTCTTaGGTCTCAAGAGACGTATATGAACCAAAGCATCTT | + |
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Preference number: 3 (lower is better) Translates to: ISATVMKSHSCS*VSRDVYEPKHL Trigger: AAGATGCTTTGGTTCATATACGTCTCTTGAGACCCAAGAGCAGGAATGGCTTTTCATTACAGTAGCTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGAAATATCGAGATCTGGCTTTCTGAAGGTTGCTTTGTTAATGTCTCCAGTTTGTTACATGTCATTCTaGCCGAAGATGCTAGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: KEISRSGFLKVALLMSPVCYMSF*PKMLAS Trigger: ACTAGCTAGCATCTTCGGCAAGAATGACATGTAACA...AACTGGAGACATTAACAAAGCAACCTTCAGAAAGCCAGATCTCGATATTTCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGAAATATCGAGATCTGGCTTTCTGAAGGTTGCTTTGTTAATGTCTCCAGTTGTTATCGGCTGCCTCTaGATTTTAAATCTCCCCATA | + |
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Preference number: 3 (lower is better) Translates to: KEISRSGFLKVALLMSPVVIGCL*ILNLPI Trigger: TATGGGGAGATTTAAAATCAAGAGGCAGCCGATAAC...AACTGGAGACATTAACAAAGCAACCTTCAGAAAGCCAGATCTCGATATTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGAGACGTATATGAACCAAAGCATCTTCAGCTGAATCATACTAACATTGATTGTTACATGTCATTCTaGCCGAAGATGCTAGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SRDVYEPKHLQLNHTNIDCYMSF*PKMLAS Trigger: ACTAGCTAGCATCTTCGGCAAGAATGACATGTAACA...ATCAATGTTAGTATGATTCAGCTGAAGATGCTTTGGTTCATATACGTCTCTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | GGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCGCGTGCTCGGCTCTaGTTGGCCCAGGGTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKVGLNNYLTLKAGRGESSRARL*LAQGGA Trigger: AGCGCCACCCTGGGCCAATCAGAGCCGAGCACGCGA...ACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CCA 90 bp | GGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTGTGGACAGGGCCTTGTaGCGCCCAGAGGCCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKVGLNNYLTLKAGRGESVDRAL*RPEADG Trigger: GCCATCGGCCTCTGGGCGCCACAAGGCCCTGTCCAC...ACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | GTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCATTCTCGCGTGCTCGGCTCTaGTTGGCCCAGGGTGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: VGLNNYLTLKAGRGESSFSRARL*LAQGGA Trigger: AGCGCCACCCTGGGCCAATCAGAGCCGAGCACGCGA...GAATGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR GCA 90 bp | GGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTACCCCACGTCCAGGCTaGAGCAGGGTCACCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GKVGLNNYLTLKAGRGESTPRPG*SRVTSR Trigger: CCTGCTGGTGACCCTGCTGCAGCCTGGACGTGGGGT...ACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR GCA 90 bp | ACTGGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGACCCCACGTCCAGGCTaGAGCAGGGTCACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGKVGLNNYLTLKAGRGETPRPG*SRVTSR Trigger: CCTGCTGGTGACCCTGCTGCAGCCTGGACGTGGGGT...CTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CCA 90 bp | GTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCATTCGTGGACAGGGCCTTGTaGCGCCCAGAGGCCGATGGC | + |
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Preference number: 4 (lower is better) Translates to: VGLNNYLTLKAGRGESSFVDRAL*RPEADG Trigger: GCCATCGGCCTCTGGGCGCCACAAGGCCCTGTCCAC...GAATGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | AAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCATCGCGTGCTCGGCTCTaGTTGGCCCAGGGTGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: KVGLNNYLTLKAGRGESSSRARL*LAQGGA Trigger: AGCGCCACCCTGGGCCAATCAGAGCCGAGCACGCGA...TGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | TGGGAGGCAGAGACAGGTGGATTTCTGAGTTTGAGGACAGCCTGGGCTACAGAGAGTTCCCTGACATTGTaGGCAGGAAGGCTGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: WEAETGGFLSLRTAWATESSLTL*AGRLPG Trigger: TCCTGGCAGCCTTCCTGCTCACAATGTCAGGGAACT...CTCTGTAGCCCAGGCTGTCCTCAAACTCAGAAATCCACCTGTCTCTGCCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGGCCCAAAGGCAGCCTTaGCCTCCTTGTTCCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TGKVGLNNYLTLKAGRGEAQRQP*PPCSAG Trigger: GCCTGCGGAACAAGGAGGTCAAGGCTGCCTTTGGGC...CTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | GGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTGCCCAAAGGCAGCCTTaGCCTCCTTGTTCCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GKVGLNNYLTLKAGRGESAQRQP*PPCSAG Trigger: GCCTGCGGAACAAGGAGGTCAAGGCTGCCTTTGGGC...ACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | GTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCATTCGCCCAAAGGCAGCCTTaGCCTCCTTGTTCCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VGLNNYLTLKAGRGESSFAQRQP*PPCSAG Trigger: GCCTGCGGAACAAGGAGGTCAAGGCTGCCTTTGGGC...GAATGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CCA 90 bp | GGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTGGCGCCATAGCGCAGTaGCCTGCAGATGGCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: GKVGLNNYLTLKAGRGESGAIAQ*PADGQK Trigger: TTTCTGGCCATCTGCAGGCCACTGCGCTATGGCGCC...ACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | AAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCAGCCCAAAGGCAGCCTTaGCCTCCTTGTTCCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KVGLNNYLTLKAGRGESSAQRQP*PPCSAG Trigger: GCCTGCGGAACAAGGAGGTCAAGGCTGCCTTTGGGC...TGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGTCTCTGGAGAGTAGCTaGCCTTGGGGCGCAAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TGKVGLNNYLTLKAGRGESLESS*PWGASG Trigger: TCCACTTGCGCCCCAAGGCCAGCTACTCTCCAGAGA...CTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCCCTGACATTGTaGGCAGGAAGGCTGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TGKVGLNNYLTLKAGRGESSLTL*AGRLPG Trigger: TCCTGGCAGCCTTCCTGCTCACAATGTCAGGGAACT...CTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | GGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTAGTTCCCTGACATTGTaGGCAGGAAGGCTGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GKVGLNNYLTLKAGRGESSSLTL*AGRLPG Trigger: TCCTGGCAGCCTTCCTGCTCACAATGTCAGGGAACT...ACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR GCA 90 bp | ACTGGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGGCGACACCACTTGCTTaGTCTCTGGAGAGTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TGKVGLNNYLTLKAGRGEATPLA*SLESSW Trigger: CCAGCTACTCTCCAGAGAGCAAGCAAGTGGTGTCGC...CTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CCA 90 bp | GTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCATTCTCTCTGGAGAGTAGCTaGCCTTGGGGCGCAAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: VGLNNYLTLKAGRGESSFSLESS*PWGASG Trigger: TCCACTTGCGCCCCAAGGCCAGCTACTCTCCAGAGA...GAATGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CCA 90 bp | GGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTCACTTGCTTGCTCTCTaGAGAGTAGCTGGCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: GKVGLNNYLTLKAGRGESHLLAL*RVAGLG Trigger: CCCAAGGCCAGCTACTCTCCAGAGAGCAAGCAAGTG...ACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGGGAAGCACTCAGATGTaGCACAGGACAGCACAAGGA | + |
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Preference number: 4 (lower is better) Translates to: TGKVGLNNYLTLKAGRGEGSTQM*HRTAQG Trigger: TCCTTGTGCTGTCCTGTGTCACATCTGAGTGCTTCC...CTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | GGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTGGAAGCACTCAGATGTaGCACAGGACAGCACAAGGA | + |
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Preference number: 4 (lower is better) Translates to: GKVGLNNYLTLKAGRGESGSTQM*HRTAQG Trigger: TCCTTGTGCTGTCCTGTGTCACATCTGAGTGCTTCC...ACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR GCA 90 bp | GTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCATTCGCGACACCACTTGCTTaGTCTCTGGAGAGTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VGLNNYLTLKAGRGESSFATPLA*SLESSW Trigger: CCAGCTACTCTCCAGAGAGCAAGCAAGTGGTGTCGC...GAATGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CCA 90 bp | GGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCTACCAGCGCCAGTTaGCGCAGGAAGAAGTACATG | + |
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Preference number: 4 (lower is better) Translates to: GKVGLNNYLTLKAGRGESSTSAS*RRKKYM Trigger: CATGTACTTCTTCCTGCGCCAACTGGCGCTGGTAGA...ACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CCA 90 bp | GTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCATTCCACTTGCTTGCTCTCTaGAGAGTAGCTGGCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: VGLNNYLTLKAGRGESSFHLLAL*RVAGLG Trigger: CCCAAGGCCAGCTACTCTCCAGAGAGCAAGCAAGTG...GAATGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | ACACTAAATTTTAAGATGGTGTGTTACATGTCATTCTTGCCGAAGATGCTAGCTTCGCGTGCTCGGCTCTaGTTGGCCCAGGGTGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: TLNFKMVCYMSFLPKMLASRARL*LAQGGA Trigger: AGCGCCACCCTGGGCCAATCAGAGCCGAGCACGCGA...AGCTAGCATCTTCGGCAAGAATGACATGTAACACACCATCTTAAAATTTAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | GTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCATTCGGAAGCACTCAGATGTaGCACAGGACAGCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGLNNYLTLKAGRGESSFGSTQM*HRTAQG Trigger: TCCTTGTGCTGTCCTGTGTCACATCTGAGTGCTTCC...GAATGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR GCA 90 bp | GTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCATTCGAAAACTCTGGTGTCTaGACACACCAGGCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGLNNYLTLKAGRGESSFENSGV*THQAQQ Trigger: CTGCTGAGCCTGGTGTGTGCAGACACCAGAGTTTTC...GAATGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR GCA 90 bp | AAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCAGCGACACCACTTGCTTaGTCTCTGGAGAGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KVGLNNYLTLKAGRGESSATPLA*SLESSW Trigger: CCAGCTACTCTCCAGAGAGCAAGCAAGTGGTGTCGC...TGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CCA 90 bp | GTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCATTCTCTACCAGCGCCAGTTaGCGCAGGAAGAAGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: VGLNNYLTLKAGRGESSFSTSAS*RRKKYM Trigger: CATGTACTTCTTCCTGCGCCAACTGGCGCTGGTAGA...GAATGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CCA 90 bp | ACACTAAATTTTAAGATGGTGTGTTACATGTCATTCTTGCCGAAGATGCTAGCTGTGGACAGGGCCTTGTaGCGCCCAGAGGCCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLNFKMVCYMSFLPKMLAVDRAL*RPEADG Trigger: GCCATCGGCCTCTGGGCGCCACAAGGCCCTGTCCAC...AGCTAGCATCTTCGGCAAGAATGACATGTAACACACCATCTTAAAATTTAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CCA 90 bp | AAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCACACTTGCTTGCTCTCTaGAGAGTAGCTGGCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVGLNNYLTLKAGRGESSHLLAL*RVAGLG Trigger: CCCAAGGCCAGCTACTCTCCAGAGAGCAAGCAAGTG...TGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | TCAAGAGACGTATATGAACCAAAGCATCTTCAGCTGAATCATACTAACATTGATTCGCGTGCTCGGCTCTaGTTGGCCCAGGGTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRDVYEPKHLQLNHTNIDSRARL*LAQGGA Trigger: AGCGCCACCCTGGGCCAATCAGAGCCGAGCACGCGA...ATCAATGTTAGTATGATTCAGCTGAAGATGCTTTGGTTCATATACGTCTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR TCA 90 bp | AAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCAGGAAGCACTCAGATGTaGCACAGGACAGCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KVGLNNYLTLKAGRGESSGSTQM*HRTAQG Trigger: TCCTTGTGCTGTCCTGTGTCACATCTGAGTGCTTCC...TGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCATCTACCAGCGCCAGTTaGCGCAGGAAGAAGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: KVGLNNYLTLKAGRGESSSTSAS*RRKKYM Trigger: CATGTACTTCTTCCTGCGCCAACTGGCGCTGGTAGA...TGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS-3UTR CCA 90 bp | GTGCACTCTAGTTGGCTAAGTGGATTCATTTGCCTACCTTTATTTAAAATAATCGTGGACAGGGCCTTGTaGCGCCCAGAGGCCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VHSSWLSGFICLPLFKIIVDRAL*RPEADG Trigger: GCCATCGGCCTCTGGGCGCCACAAGGCCCTGTCCAC...GATTATTTTAAATAAAGGTAGGCAAATGAATCCACTTAGCCAACTAGAGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS-3UTR TCA 90 bp | AAAGAAATATCGAGATCTGGCTTTCTGAAGGTTGCTTTGTTAATGTCTCCAGTTGCCCAAAGGCAGCCTTaGCCTCCTTGTTCCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEISRSGFLKVALLMSPVAQRQP*PPCSAG Trigger: GCCTGCGGAACAAGGAGGTCAAGGCTGCCTTTGGGC...AACTGGAGACATTAACAAAGCAACCTTCAGAAAGCCAGATCTCGATATTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS-3UTR GCA 90 bp | GTGCACTCTAGTTGGCTAAGTGGATTCATTTGCCTACCTTTATTTAAAATAATCACCCCACGTCCAGGCTaGAGCAGGGTCACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHSSWLSGFICLPLFKIITPRPG*SRVTSR Trigger: CCTGCTGGTGACCCTGCTGCAGCCTGGACGTGGGGT...GATTATTTTAAATAAAGGTAGGCAAATGAATCCACTTAGCCAACTAGAGTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS-3UTR GCA 90 bp | TCAAGAGACGTATATGAACCAAAGCATCTTCAGCTGAATCATACTAACATTGATACCCCACGTCCAGGCTaGAGCAGGGTCACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRDVYEPKHLQLNHTNIDTPRPG*SRVTSR Trigger: CCTGCTGGTGACCCTGCTGCAGCCTGGACGTGGGGT...ATCAATGTTAGTATGATTCAGCTGAAGATGCTTTGGTTCATATACGTCTCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATATCGAGATCTGGCTTTCTGAAGGTTGCTTTGTTAATGTCTCCAGTTTCTCTGGAGAGTAGCTaGCCTTGGGGCGCAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEISRSGFLKVALLMSPVSLESS*PWGASG Trigger: TCCACTTGCGCCCCAAGGCCAGCTACTCTCCAGAGA...AACTGGAGACATTAACAAAGCAACCTTCAGAAAGCCAGATCTCGATATTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS-3UTR CCA 90 bp | GTGCACTCTAGTTGGCTAAGTGGATTCATTTGCCTACCTTTATTTAAAATAATCTCTCTGGAGAGTAGCTaGCCTTGGGGCGCAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHSSWLSGFICLPLFKIISLESS*PWGASG Trigger: TCCACTTGCGCCCCAAGGCCAGCTACTCTCCAGAGA...GATTATTTTAAATAAAGGTAGGCAAATGAATCCACTTAGCCAACTAGAGTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS-3UTR CCA 90 bp | ACACTAAATTTTAAGATGGTGTGTTACATGTCATTCTTGCCGAAGATGCTAGCTCACTTGCTTGCTCTCTaGAGAGTAGCTGGCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLNFKMVCYMSFLPKMLAHLLAL*RVAGLG Trigger: CCCAAGGCCAGCTACTCTCCAGAGAGCAAGCAAGTG...AGCTAGCATCTTCGGCAAGAATGACATGTAACACACCATCTTAAAATTTAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS-3UTR TCA 90 bp | GTGCACTCTAGTTGGCTAAGTGGATTCATTTGCCTACCTTTATTTAAAATAATCAGTTCCCTGACATTGTaGGCAGGAAGGCTGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHSSWLSGFICLPLFKIISSLTL*AGRLPG Trigger: TCCTGGCAGCCTTCCTGCTCACAATGTCAGGGAACT...GATTATTTTAAATAAAGGTAGGCAAATGAATCCACTTAGCCAACTAGAGTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR GCA 90 bp | GTGCACTCTAGTTGGCTAAGTGGATTCATTTGCCTACCTTTATTTAAAATAATCGCGACACCACTTGCTTaGTCTCTGGAGAGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHSSWLSGFICLPLFKIIATPLA*SLESSW Trigger: CCAGCTACTCTCCAGAGAGCAAGCAAGTGGTGTCGC...GATTATTTTAAATAAAGGTAGGCAAATGAATCCACTTAGCCAACTAGAGTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CCA 90 bp | GTGCACTCTAGTTGGCTAAGTGGATTCATTTGCCTACCTTTATTTAAAATAATCTCTACCAGCGCCAGTTaGCGCAGGAAGAAGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: VHSSWLSGFICLPLFKIISTSAS*RRKKYM Trigger: CATGTACTTCTTCCTGCGCCAACTGGCGCTGGTAGA...GATTATTTTAAATAAAGGTAGGCAAATGAATCCACTTAGCCAACTAGAGTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS TCA 90 bp | TCCAGGCTGCAGCAGGGTCACCAGCAGGCGGGGTGCCACGTCCAGTaGGAAGCAGATCTCTACCAGCGCCAGTTGGCGCAGGAAGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SRLQQGHQQAGCHVQ*EADLYQRQLAQEEV Trigger: TACTTCTTCCTGCGCCAACTGGCGCTGGTAGAGATCTGCTTCTCACTGGACGTGGCACCCCGCCTGCTGGTGACCCTGCTGCAGCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000051982.6 ENSMUST00000207043.2 ENSMUST00000207075.2 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS GCA 90 bp | AGAAGGAAGCACTCAGATGTGACACAGGACAGCACAAGGAGCAGCTaGAGGGCACAGCTCGTGGGGGACACCCCACGTCCAGGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRKHSDVTQDSTRSS*RAQLVGDTPRPGCS Trigger: GCTGCAGCCTGGACGTGGGGTGTCCCCCACGAGCTGTGCCCTGCAGCTGCTCCTTGTGCTGTCCTGTGTCACATCTGAGTGCTTCCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000051982.6 ENSMUST00000207043.2 ENSMUST00000207075.2 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CAA 90 bp | TGGGAGGCAGAGACAGGTGGATTTCTGAGTTTGAGGACAGCCTGGGCTACAGAGCTCTACCAGCGCCAGTaGGCGCAGGAAGAAGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: WEAETGGFLSLRTAWATELYQRQ*AQEEVH Trigger: ATGTACTTCTTCCTGCGCCAACTGGCGCTGGTAGAG...CTCTGTAGCCCAGGCTGTCCTCAAACTCAGAAATCCACCTGTCTCTGCCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS GCA 90 bp | GAGGACGGTGGCCACAAACACATTGGCCTCGAAAACTCTGGTGTCTaGACACACCAGGCTCAGCAGAGGTGCTATGTCACAAAAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EDGGHKHIGLENSGV*THQAQQRCYVTKEV Trigger: CACTTCTTTTGTGACATAGCACCTCTGCTGAGCCTGGTGTGTGCAGACACCAGAGTTTTCGAGGCCAATGTGTTTGTGGCCACCGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS CCA 90 bp | GCTCAGCAGAGGTGCTATGTCACAAAAGAAGTGTCGGATGCCACGTaGCCCACAGAAGGGGAAGTTAAAGAGCCAGATGGTGAAGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: AQQRCYVTKEVSDAT*PTEGEVKEPDGEDE Trigger: CTCGTCTTCACCATCTGGCTCTTTAACTTCCCCTTCTGTGGGCCACGTGGCATCCGACACTTCTTTTGTGACATAGCACCTCTGCTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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| CDS-3UTR CAA 90 bp | GGGAAAGTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTCTCTACCAGCGCCAGTaGGCGCAGGAAGAAGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: GKVGLNNYLTLKAGRGESLYQRQ*AQEEVH Trigger: ATGTACTTCTTCCTGCGCCAACTGGCGCTGGTAGAG...ACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCACTTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGCCTCAATAATTATCTGACGCTGAAAGCTGGCAGAGGAGAGAGTTCATTCCTCTACCAGCGCCAGTaGGCGCAGGAAGAAGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: VGLNNYLTLKAGRGESSFLYQRQ*AQEEVH Trigger: ATGTACTTCTTCCTGCGCCAACTGGCGCTGGTAGAG...GAATGAACTCTCTCCTCTGCCAGCTTTCAGCGTCAGATAATTATTGAGGCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS-3UTR CAA 90 bp | ACACTAAATTTTAAGATGGTGTGTTACATGTCATTCTTGCCGAAGATGCTAGCTCTCTACCAGCGCCAGTaGGCGCAGGAAGAAGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: TLNFKMVCYMSFLPKMLALYQRQ*AQEEVH Trigger: ATGTACTTCTTCCTGCGCCAACTGGCGCTGGTAGAG...AGCTAGCATCTTCGGCAAGAATGACATGTAACACACCATCTTAAAATTTAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS TCA 72 bp | CCCAGCAGCACGAACTCCAGCTCGCGTGCTCGGCTCTaGTTGGCCCAGGGTGGCGCTTCCCAGAAGGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSSTNSSSRARL*LAQGGASQKGG Trigger: GCCACCCTTCTGGGAAGCGCCACCCTGGGCCAATCAGAGCCGAGCACGCGAGCTGGAGTTCGTGCTGCTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000051982.6 ENSMUST00000207043.2 ENSMUST00000207075.2 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS TCA 72 bp | CAGCAGGGTCACCAGCAGGCGGGGTGCCACGTCCAGTaGGAAGCAGATCTCTACCAGCGCCAGTTGGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QQGHQQAGCHVQ*EADLYQRQLAQ Trigger: CTGCGCCAACTGGCGCTGGTAGAGATCTGCTTCTCACTGGACGTGGCACCCCGCCTGCTGGTGACCCTGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000051982.6 ENSMUST00000207043.2 ENSMUST00000207075.2 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS GCA 72 bp | GTGTGCAAAACCCAGCAGCACGAACTCCAGCTCGCGTaGTCGGCTCTGATTGGCCCAGGGTGGCGCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VCKTQQHELQLA*SALIGPGWRFP Trigger: TGGGAAGCGCCACCCTGGGCCAATCAGAGCCGAGCACGCGAGCTGGAGTTCGTGCTGCTGGGTTTTGCACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000051982.6 ENSMUST00000207043.2 ENSMUST00000207075.2 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS GCA 72 bp | GGGTCACCATGGTGTATGACAGCGACACCACTTGCTTaGTCTCTGGAGAGTAGCTGGCCTTGGGGCGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSPWCMTATPLA*SLESSWPWGAS Trigger: ACTTGCGCCCCAAGGCCAGCTACTCTCCAGAGAGCAAGCAAGTGGTGTCGCTGTCATACACCATGGTGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS GCA 72 bp | GAAGGGGAAGTTAAAGAGCCAGATGGTGAAGACGAGTaGCACAGGGATTCCCGCCAGCCAGCAGGTAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: EGEVKEPDGEDE*HRDSRQPAGSS Trigger: GCTACTACCTGCTGGCTGGCGGGAATCCCTGTGGCACTCGTCTTCACCATCTGGCTCTTTAACTTCCCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000051982.6 ENSMUST00000207043.2 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS GCA 72 bp | GGCCACAAACACATTGGCCTCGAAAACTCTGGTGTCTaGACACACCAGGCTCAGCAGAGGTGCTATGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: GHKHIGLENSGV*THQAQQRCYVT Trigger: TGTGACATAGCACCTCTGCTGAGCCTGGTGTGTGCAGACACCAGAGTTTTCGAGGCCAATGTGTTTGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
||
| CDS TCA 72 bp | TCTCTGGAGAGTAGCTGGCCTTGGGGCGCAAGTGGATaGCCCCTGTTGTGCCATAGAACAGAATTACCACTA | + |
|
Preference number: 6 (lower is better) Translates to: SLESSWPWGASG*PLLCHRTELPL Trigger: TAGTGGTAATTCTGTTCTATGGCACAACAGGGGTCATCCACTTGCGCCCCAAGGCCAGCTACTCTCCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051982.6 ENSMUST00000207820.3 ENSMUST00000213504.2 ENSMUST00000213656.2 ENSMUST00000216447.2 |
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