Pregenerated sensors for OLFR1348 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093877Ensembl transcript IDs: ENSMUST00000086319.5, ENSMUST00000207624.2, ENSMUST00000208066.3, ENSMUST00000209029.4, ENSMUST00000209097.2, ENSMUST00000213549.2, ENSMUST00000214383.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCATGTGAGTGCAAGTGCCTGCAGTGGTCAGAAGAGGACACCAGCTaGACTGGAGTTGCAGTTACAGGCTGTGGTGAGCCATCTGAAATA | + |
|
Preference number: 1 (lower is better) Translates to: ACECKCLQWSEEDTS*TGVAVTGCGEPSEI Trigger: TATTTCAGATGGCTCACCACAGCCTGTAACTGCAACTCCAGTGCAGCTGGTGTCCTCTTCTGACCACTGCAGGCACTTGCACTCACATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR GCA 90 bp | TGTATCAATGTCATCTGTGTAGGAGTATGTGCATGTGAGTGCAAGTaGCTGCAGTGGTCAGAAGAGGACACCAGCTGCACTGGAGTTGCA | + |
|
Preference number: 1 (lower is better) Translates to: CINVICVGVCACECK*LQWSEEDTSCTGVA Trigger: TGCAACTCCAGTGCAGCTGGTGTCCTCTTCTGACCACTGCAGGCACTTGCACTCACATGCACATACTCCTACACAGATGACATTGATACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR CCA 90 bp | AGGGCATCAGATTCCTCTTTAGCAATAGTTACCAGCTGTTGTGACTaGGTGCTGGGAACTAAACTCAGGTTCTCTGAAAAAGCAGCAAGC | + |
|
Preference number: 1 (lower is better) Translates to: RASDSSLAIVTSCCD*VLGTKLRFSEKAAS Trigger: GCTTGCTGCTTTTTCAGAGAACCTGAGTTTAGTTCCCAGCACCCAGTCACAACAGCTGGTAACTATTGCTAAAGAGGAATCTGATGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR CCA 90 bp | AATCATGTATTTCTATGTGTTTGTGCACATGAGTGCAGGTACCTGTaGAGGCCAGAAGAGGGCATCAGATTCCTCTTTAGCAATAGTTAC | + |
|
Preference number: 1 (lower is better) Translates to: NHVFLCVCAHECRYL*RPEEGIRFLFSNSY Trigger: GTAACTATTGCTAAAGAGGAATCTGATGCCCTCTTCTGGCCTCCACAGGTACCTGCACTCATGTGCACAAACACATAGAAATACATGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR TCA 90 bp | CTTCTACTGAAACTTGGTATAGAAGAGCATGCCAACATGGAACCATaGTTATATAATGTGGTTAAAGAATCTCAGTTGGTGCTGAAGACA | + |
|
Preference number: 1 (lower is better) Translates to: LLLKLGIEEHANMEP*LYNVVKESQLVLKT Trigger: TGTCTTCAGCACCAACTGAGATTCTTTAACCACATTATATAATCATGGTTCCATGTTGGCATGCTCTTCTATACCAAGTTTCAGTAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGACAAGACAACAGACCTTACATATCCCTGCCACAAAAGTAACCATGTGCACAAGCACTCCTAACCACTaGGCCATCATCTCTCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LTRQQTLHIPATKVTMCTSTPNH*AIISPA Trigger: TGCTGGAGAGATGATGGCTCAGTGGTTAGGAGTGCT...TGTGCACATGGTTACTTTTGTGGCAGGGATATGTAAGGTCTGTTGTCTTGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGCAGTGGTCAGAAGAGGACACCAGCTGCACTGGAGTTGCAGTTACAGGCTGTTTTCTATTGGACTTTaGAAACTTCTCCTTGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: PAVVRRGHQLHWSCSYRLFSIGL*KLLLGY Trigger: ATACCCAAGGAGAAGTTTGCAAAGTCCAATAGAAAA...CAGCCTGTAACTGCAACTCCAGTGCAGCTGGTGTCCTCTTCTGACCACTGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCAGTGGTCAGAAGAGGACACCAGCTGCACTGGAGTTGCAGTTACAGGCTGTGTCTTGTTTTCTATTaGACTTTGCAAACTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PAVVRRGHQLHWSCSYRLCLVFY*TLQTSP Trigger: AGGAGAAGTTTGCAAAGTCCAATAGAAAACAAGACA...CAGCCTGTAACTGCAACTCCAGTGCAGCTGGTGTCCTCTTCTGACCACTGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAATACGTACTGGTGACTGAACTTGGGTCCTCTGCACAAGCACTATGTGCCTTGGAAGGAGACTATTaGAAAGAGGAAAGAGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: LKYVLVTELGSSAQALCALEGDY*KEERDQ Trigger: CTGGTCTCTTTCCTCTTTCCAATAGTCTCCTTCCAA...GGCACATAGTGCTTGTGCAGAGGACCCAAGTTCAGTCACCAGTACGTATTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGAAAGAACATAACAGTTCTGACAAGACAACAGACCTTACATATCCCTGCCAGCACTCCTAACCACTaGGCCATCATCTCTCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TRKNITVLTRQQTLHIPASTPNH*AIISPA Trigger: TGCTGGAGAGATGATGGCTCAGTGGTTAGGAGTGCT...GGCAGGGATATGTAAGGTCTGTTGTCTTGTCAGAACTGTTATGTTCTTTCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGTTGCAGTTACAGGCTGTGGTGAGCCATCTGAAATACGTACTGGTGACTGAAGACCTTACATATCCCTaGCACAAAAGTAACCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: ELQLQAVVSHLKYVLVTEDLTYP*HKSNHV Trigger: CACATGGTTACTTTTGTGGCAGGGATATGTAAGGTC...TTCAGTCACCAGTACGTATTTCAGATGGCTCACCACAGCCTGTAACTGCAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGTTGCAGTTACAGGCTGTGGTGAGCCATCTGAAATACGTACTGGTGACTGAATTGGAAGGAGACTATTaGAAAGAGGAAAGAGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: ELQLQAVVSHLKYVLVTELEGDY*KEERDQ Trigger: CTGGTCTCTTTCCTCTTTCCAATAGTCTCCTTCCAA...TTCAGTCACCAGTACGTATTTCAGATGGCTCACCACAGCCTGTAACTGCAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTGCAAAAACCTGGTCCAATCTTCTACTGAAACTTGGTATAGAAGAGCATGCCACAAAAGTAACCATGTaGACAATAAATACAGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: GAKTWSNLLLKLGIEEHATKVTM*TINTGQ Trigger: TTGGCCTGTATTTATTGTGCACATGGTTACTTTTGT...GGCATGCTCTTCTATACCAAGTTTCAGTAGAAGATTGGACCAGGTTTTTGCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGACAAGACAACAGACCTTACATATCCCTGCCACAAAAGTAACCATGTGCACATGTCTTGTTTTCTATTaGACTTTGCAAACTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LTRQQTLHIPATKVTMCTCLVFY*TLQTSP Trigger: AGGAGAAGTTTGCAAAGTCCAATAGAAAACAAGACA...TGTGCACATGGTTACTTTTGTGGCAGGGATATGTAAGGTCTGTTGTCTTGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGTGCAAAAACCTGGTCCAATCTTCTACTGAAACTTGGTATAGAAGAGCATACAAACTTTGGATCATaGCTTAAGAAGGATGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: KGAKTWSNLLLKLGIEEHTNFGS*LKKDVT Trigger: AGTGACATCCTTCTTAAGTCATGATCCAAAGTTTGT...ATGCTCTTCTATACCAAGTTTCAGTAGAAGATTGGACCAGGTTTTTGCACCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTAGCTGATTGCTCATCCAATGGGAAGACTATAAATGGAGTGCAGAGTTTTTTTTCTATTGGACTTTaGAAACTTCTCCTTGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: TVADCSSNGKTINGVQSFFSIGL*KLLLGY Trigger: ATACCCAAGGAGAAGTTTGCAAAGTCCAATAGAAAA...AAAACTCTGCACTCCATTTATAGTCTTCCCATTGGATGAGCAATCAGCTACTGT 38% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTCAGTCATCTAGGAATAAAAATGATGGGATGCTCAAGCCACAAACTTTGGTGTCTTGTTTTCTATTaGACTTTGCAAACTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CVSHLGIKMMGCSSHKLWCLVFY*TLQTSP Trigger: AGGAGAAGTTTGCAAAGTCCAATAGAAAACAAGACA...CCAAAGTTTGTGGCTTGAGCATCCCATCATTTTTATTCCTAGATGACTGACACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAGGTGCAAAAACCTGGTCCAATCTTCTACTGAAACTTGGTATAGAAGAGCATTTTTCTATTGGACTTTaGAAACTTCTCCTTGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: KGAKTWSNLLLKLGIEEHFSIGL*KLLLGY Trigger: ATACCCAAGGAGAAGTTTGCAAAGTCCAATAGAAAA...ATGCTCTTCTATACCAAGTTTCAGTAGAAGATTGGACCAGGTTTTTGCACCTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAAGACACAAGAAAGAACATAACAGTTCTGACAAGACAACAGACCTTACATACAAAAGTAACCATGTaGACAATAAATACAGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: AEDTRKNITVLTRQQTLHTKVTM*TINTGQ Trigger: TTGGCCTGTATTTATTGTGCACATGGTTACTTTTGT...ATGTAAGGTCTGTTGTCTTGTCAGAACTGTTATGTTCTTTCTTGTGTCTTCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR CAA 90 bp | GAAGGATGTCACTGGCCACTTAGACAATCTTTGTCTTGTTTTCTATaGGACTTTGCAAACTTCTCCTTGGGTATTTCAGATTTAATTATT | + |
|
Preference number: 2 (lower is better) Translates to: EGCHWPLRQSLSCFL*DFANFSLGISDLII Trigger: AATAATTAAATCTGAAATACCCAAGGAGAAGTTTGCAAAGTCCAATAGAAAACAAGACAAAGATTGTCTAAGTGGCCAGTGACATCCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR GCA 72 bp | TGCAAGTGCCTGCAGTGGTCAGAAGAGGACACCAGCTaGACTGGAGTTGCAGTTACAGGCTGTGGTGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CKCLQWSEEDTS*TGVAVTGCGEP Trigger: TGGCTCACCACAGCCTGTAACTGCAACTCCAGTGCAGCTGGTGTCCTCTTCTGACCACTGCAGGCACTTGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR CCA 72 bp | GTAGGAGTATGTGCATGTGAGTGCAAGTGCCTGCAGTaGTCAGAAGAGGACACCAGCTGCACTGGAGTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VGVCACECKCLQ*SEEDTSCTGVA Trigger: TGCAACTCCAGTGCAGCTGGTGTCCTCTTCTGACCACTGCAGGCACTTGCACTCACATGCACATACTCCTAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR GCA 72 bp | ATCAATGTCATCTGTGTAGGAGTATGTGCATGTGAGTaGAAGTGCCTGCAGTGGTCAGAAGAGGACACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: INVICVGVCACE*KCLQWSEEDTS Trigger: GCTGGTGTCCTCTTCTGACCACTGCAGGCACTTGCACTCACATGCACATACTCCTACACAGATGACATTGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR CCA 72 bp | TTTCTATGTGTTTGTGCACATGAGTGCAGGTACCTGTaGAGGCCAGAAGAGGGCATCAGATTCCTCTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: FLCVCAHECRYL*RPEEGIRFLFS Trigger: GCTAAAGAGGAATCTGATGCCCTCTTCTGGCCTCCACAGGTACCTGCACTCATGTGCACAAACACATAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGCCTGCAGTGGTCAGAAGAGGACACCAGCTGCACTGGAGTTGCAGTTACAGTTAAAGAATCTCAGTaGGTGCTGAAGACACAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KCLQWSEEDTSCTGVAVTVKESQ*VLKTQE Trigger: TTCTTGTGTCTTCAGCACCAACTGAGATTCTTTAAC...TGTAACTGCAACTCCAGTGCAGCTGGTGTCCTCTTCTGACCACTGCAGGCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR GCA 72 bp | TTCCTAGGGTATCTTTCCAGCCCCACAGTAGCTGATTaGTCATCCAATGGGAAGACTATAAATGGAGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLGYLSSPTVAD*SSNGKTINGVQ Trigger: CTGCACTCCATTTATAGTCTTCCCATTGGATGAGCAATCAGCTACTGTGGGGCTGGAAAGATACCCTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR CCA 72 bp | GATTCCTCTTTAGCAATAGTTACCAGCTGTTGTGACTaGGTGCTGGGAACTAAACTCAGGTTCTCTGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: DSSLAIVTSCCD*VLGTKLRFSEK Trigger: TTTTTCAGAGAACCTGAGTTTAGTTCCCAGCACCCAGTCACAACAGCTGGTAACTATTGCTAAAGAGGAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAAAAACCTGGTCCAATCTTCTACTGAAACTTGGTATAGAAGAGCATGCCAACATTGGAAGGAGACTATaGGAAAGAGGAAAGAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: AKTWSNLLLKLGIEEHANIGRRL*ERGKRP Trigger: TGGTCTCTTTCCTCTTTCCAATAGTCTCCTTCCAAT...GTTGGCATGCTCTTCTATACCAAGTTTCAGTAGAAGATTGGACCAGGTTTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR CCA 72 bp | AGGTGCAAAAACCTGGTCCAATCTTCTACTGAAACTTaGTATAGAAGAGCATGCCAACATGGAACCATGATT | + |
|
Preference number: 3 (lower is better) Translates to: RCKNLVQSSTET*YRRACQHGTMI Trigger: AATCATGGTTCCATGTTGGCATGCTCTTCTATACCAAGTTTCAGTAGAAGATTGGACCAGGTTTTTGCACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTAGCTGATTGCTCATCCAATGGGAAGACTATAAATGGAGTGCAGAGTTTTATTGGAAGGAGACTATaGGAAAGAGGAAAGAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: TVADCSSNGKTINGVQSFIGRRL*ERGKRP Trigger: TGGTCTCTTTCCTCTTTCCAATAGTCTCCTTCCAAT...AAAACTCTGCACTCCATTTATAGTCTTCCCATTGGATGAGCAATCAGCTACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGAAAGAACATAACAGTTCTGACAAGACAACAGACCTTACATATCCCTGCCGTTTTCTATTGGACTTaGCAAACTTCTCCTTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: TRKNITVLTRQQTLHIPAVFYWT*QTSPWV Trigger: TACCCAAGGAGAAGTTTGCAAAGTCCAATAGAAAAC...GGCAGGGATATGTAAGGTCTGTTGTCTTGTCAGAACTGTTATGTTCTTTCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCATCTAGGAATAAAAATGATGGGATGCTCAAGCCACAAACTTTGGATCATGGTTTTCTATTGGACTTaGCAAACTTCTCCTTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SHLGIKMMGCSSHKLWIMVFYWT*QTSPWV Trigger: TACCCAAGGAGAAGTTTGCAAAGTCCAATAGAAAAC...CATGATCCAAAGTTTGTGGCTTGAGCATCCCATCATTTTTATTCCTAGATGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTAGCTGATTGCTCATCCAATGGGAAGACTATAAATGGAGTGCAGAGTTTTTTGTCTTGTTTTCTATaGGACTTTGCAAACTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TVADCSSNGKTINGVQSFLSCFL*DFANFS Trigger: GGAGAAGTTTGCAAAGTCCAATAGAAAACAAGACAA...AAAACTCTGCACTCCATTTATAGTCTTCCCATTGGATGAGCAATCAGCTACTGT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGTGCAAAAACCTGGTCCAATCTTCTACTGAAACTTGGTATAGAAGAGCATGTTAAAGAATCTCAGTaGGTGCTGAAGACACAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KGAKTWSNLLLKLGIEEHVKESQ*VLKTQE Trigger: TTCTTGTGTCTTCAGCACCAACTGAGATTCTTTAAC...ATGCTCTTCTATACCAAGTTTCAGTAGAAGATTGGACCAGGTTTTTGCACCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR TCA 72 bp | AAACTTGGTATAGAAGAGCATGCCAACATGGAACCATaGTTATATAATGTGGTTAAAGAATCTCAGTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KLGIEEHANMEP*LYNVVKESQLV Trigger: CACCAACTGAGATTCTTTAACCACATTATATAATCATGGTTCCATGTTGGCATGCTCTTCTATACCAAGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR TCA 72 bp | GATTATATAATGTGGTTAAAGAATCTCAGTTGGTGCTaGAGACACAAGAAAGAACATAACAGTTCTGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: DYIMWLKNLSWC*RHKKEHNSSDK Trigger: CTTGTCAGAACTGTTATGTTCTTTCTTGTGTCTTCAGCACCAACTGAGATTCTTTAACCACATTATATAATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR CAA 72 bp | TGCAGTGGTCAGAAGAGGACACCAGCTGCACTGGAGTaGCAGTTACAGGCTGTGGTGAGCCATCTGAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: CSGQKRTPAALE*QLQAVVSHLKY Trigger: GTATTTCAGATGGCTCACCACAGCCTGTAACTGCAACTCCAGTGCAGCTGGTGTCCTCTTCTGACCACTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR TCA 90 bp | CACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGTCAGAGGGGGATACTTGGGGCCTCATaGGCAGTGGGTAGTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HQTTPLDLKECLVHGQRGILGAS*AVGSVV Trigger: CACTACACTACCCACTGCTCATGAGGCCCCAAGTAT...CCCCCTCTGACCATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CCA 90 bp | CACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGTCAGAGGGGGGGAACTTCTGAACCCTaGTCATGTTGGCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HQTTPLDLKECLVHGQRGGTSEP*SCWPAP Trigger: TGGAGCTGGCCAACATGACCAGGGTTCAGAAGTTCC...CCCCCTCTGACCATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTG 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR TCA 90 bp | TTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGTCAGAGGGTGTCATGCAGAGTGTaGAGGGAATGTGGTAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FHQTTPLDLKECLVHGQRVSCRV*RECGRA Trigger: GGCCCTACCACATTCCCTTCACACTCTGCATGACAC...CCTCTGACCATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAATACGTACTGGTGACTGAACTTGGGTCCTCTGCACAAGCACTATGTGCCATACTTGGGGCCTCATaGGCAGTGGGTAGTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKYVLVTELGSSAQALCAILGAS*AVGSVV Trigger: CACTACACTACCCACTGCTCATGAGGCCCCAAGTAT...GGCACATAGTGCTTGTGCAGAGGACCCAAGTTCAGTCACCAGTACGTATTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR TCA 90 bp | TTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGTCAGAGGATACTTGGGGCCTCATaGGCAGTGGGTAGTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FHQTTPLDLKECLVHGQRILGAS*AVGSVV Trigger: CACTACACTACCCACTGCTCATGAGGCCCCAAGTAT...CCTCTGACCATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTGCAGTTACAGGCTGTGGTGAGCCATCTGAAATACGTACTGGTGACTGAAGGAACTTCTGAACCCTaGTCATGTTGGCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELQLQAVVSHLKYVLVTEGTSEP*SCWPAP Trigger: TGGAGCTGGCCAACATGACCAGGGTTCAGAAGTTCC...TTCAGTCACCAGTACGTATTTCAGATGGCTCACCACAGCCTGTAACTGCAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR TCA 90 bp | TTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGTCAGAGGGTAAGGTGGGCATGGTaGCTGACACATAGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FHQTTPLDLKECLVHGQRVRWAW*LTHSTS Trigger: AGATGTGCTATGTGTCAGTCACCATGCCCACCTTAC...CCTCTGACCATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR GCA 90 bp | CTGAAATACGTACTGGTGACTGAACTTGGGTCCTCTGCACAAGCACTATGTGCCAAGACAGACTGGCAATaGATGTTGTTTTGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LKYVLVTELGSSAQALCAKTDWQ*MLFWPL Trigger: CAGTGGCCAAAACAACATGCATTGCCAGTCTGTCTT...GGCACATAGTGCTTGTGCAGAGGACCCAAGTTCAGTCACCAGTACGTATTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAGGTATTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGAACTTCTGAACCCTaGTCATGTTGGCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IEVFHQTTPLDLKECLVHGTSEP*SCWPAP Trigger: TGGAGCTGGCCAACATGACCAGGGTTCAGAAGTTCC...ATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAATACCTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CCA 90 bp | CACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGTCAGAGGGGGTTTTTCAGCACAGTGTaGACCTCCTTATTTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HQTTPLDLKECLVHGQRGFFSTV*TSLFLR Trigger: TCTGAGAAATAAGGAGGTCCACACTGTGCTGAAAAA...CCCCCTCTGACCATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR TCA 90 bp | ATAGAGGTATTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGTAAGGTGGGCATGGTaGCTGACACATAGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: IEVFHQTTPLDLKECLVHVRWAW*LTHSTS Trigger: AGATGTGCTATGTGTCAGTCACCATGCCCACCTTAC...ATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAATACCTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR TCA 90 bp | ATGATAGAGGTATTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGGTAAGGTGGGCATGGTaGCTGACACATAGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: MIEVFHQTTPLDLKECLVVRWAW*LTHSTS Trigger: AGATGTGCTATGTGTCAGTCACCATGCCCACCTTAC...CACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAATACCTCTATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGAAAGAACATAACAGTTCTGACAAGACAACAGACCTTACATATCCCTGCCATACTTGGGGCCTCATaGGCAGTGGGTAGTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TRKNITVLTRQQTLHIPAILGAS*AVGSVV Trigger: CACTACACTACCCACTGCTCATGAGGCCCCAAGTAT...GGCAGGGATATGTAAGGTCTGTTGTCTTGTCAGAACTGTTATGTTCTTTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR GCA 90 bp | GTATTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGTCAGAAGACAGACTGGCAATaGATGTTGTTTTGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VFHQTTPLDLKECLVHGQKTDWQ*MLFWPL Trigger: CAGTGGCCAAAACAACATGCATTGCCAGTCTGTCTT...CTGACCATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTATTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGTCAATGCATGTTGTTTTaGCCACTGAGACAATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVFHQTTPLDLKECLVHGQCMLF*PLRQSA Trigger: GGCTGATTGTCTCAGTGGCCAAAACAACATGCATTG...ACCATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAATACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGAAAGAACATAACAGTTCTGACAAGACAACAGACCTTACATATCCCTGCCGTAAGGTGGGCATGGTaGCTGACACATAGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: TRKNITVLTRQQTLHIPAVRWAW*LTHSTS Trigger: AGATGTGCTATGTGTCAGTCACCATGCCCACCTTAC...GGCAGGGATATGTAAGGTCTGTTGTCTTGTCAGAACTGTTATGTTCTTTCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR GCA 90 bp | ATAGAGGTATTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATAAGACAGACTGGCAATaGATGTTGTTTTGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: IEVFHQTTPLDLKECLVHKTDWQ*MLFWPL Trigger: CAGTGGCCAAAACAACATGCATTGCCAGTCTGTCTT...ATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAATACCTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CCA 90 bp | ACATATCCCTGCCACAAAAGTAACCATGTGCACAATAAATACAGGCCAACAGATCAATGCATGTTGTTTTaGCCACTGAGACAATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TYPCHKSNHVHNKYRPTDQCMLF*PLRQSA Trigger: GGCTGATTGTCTCAGTGGCCAAAACAACATGCATTG...ATCTGTTGGCCTGTATTTATTGTGCACATGGTTACTTTTGTGGCAGGGATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR CAA 72 bp | AGGAATAAAAATGATGGGATGCTCAAGCCACAAACTTaGGATCATGACTTAAGAAGGATGTCACTGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RNKNDGMLKPQT*DHDLRRMSLAT Trigger: AGTGGCCAGTGACATCCTTCTTAAGTCATGATCCAAAGTTTGTGGCTTGAGCATCCCATCATTTTTATTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGTGCAAAAACCTGGTCCAATCTTCTACTGAAACTTGGTATAGAAGAGCATAAGACAGACTGGCAATaGATGTTGTTTTGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KGAKTWSNLLLKLGIEEHKTDWQ*MLFWPL Trigger: CAGTGGCCAAAACAACATGCATTGCCAGTCTGTCTT...ATGCTCTTCTATACCAAGTTTCAGTAGAAGATTGGACCAGGTTTTTGCACCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAGGTATTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATTTTTTCAGCACAGTGTaGACCTCCTTATTTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IEVFHQTTPLDLKECLVHFFSTV*TSLFLR Trigger: TCTGAGAAATAAGGAGGTCCACACTGTGCTGAAAAA...ATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAATACCTCTAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CCA 90 bp | AGTCATCTAGGAATAAAAATGATGGGATGCTCAAGCCACAAACTTTGGATCATGTTTTTCAGCACAGTGTaGACCTCCTTATTTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHLGIKMMGCSSHKLWIMFFSTV*TSLFLR Trigger: TCTGAGAAATAAGGAGGTCCACACTGTGCTGAAAAA...CATGATCCAAAGTTTGTGGCTTGAGCATCCCATCATTTTTATTCCTAGATGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR CAA 72 bp | CACTGGCCACTTAGACAATCTTTGTCTTGTTTTCTATaGGACTTTGCAAACTTCTCCTTGGGTATTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HWPLRQSLSCFL*DFANFSLGISD Trigger: ATCTGAAATACCCAAGGAGAAGTTTGCAAAGTCCAATAGAAAACAAGACAAAGATTGTCTAAGTGGCCAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| 3UTR CAA 72 bp | TTGTCTTGTTTTCTATTGGACTTTGCAAACTTCTCCTaGGGTATTTCAGATTTAATTATTGCTTGGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSCFLLDFANFS*GISDLIIAWCG Trigger: ACCACACCAAGCAATAATTAAATCTGAAATACCCAAGGAGAAGTTTGCAAAGTCCAATAGAAAACAAGACAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGTGGTCAGAAGAGGACACCAGCTGCACTGGAGTTGCAGTTACAGGCTGATGACAGACAGCACCTaGTTGAGGTCCATGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PAVVRRGHQLHWSCSYRLMTDST*LRSMDL Trigger: CAAGTCCATGGACCTCAACAAGGTGCTGTCTGTCAT...CAGCCTGTAACTGCAACTCCAGTGCAGCTGGTGTCCTCTTCTGACCACTGCAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGCCTGCAGTGGTCAGAAGAGGACACCAGCTGCACTGGAGTTGCAGTTACAACAGACAGCACCTTGTaGAGGTCCATGGACTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KCLQWSEEDTSCTGVAVTTDSTL*RSMDLM Trigger: CATCAAGTCCATGGACCTCAACAAGGTGCTGTCTGT...TGTAACTGCAACTCCAGTGCAGCTGGTGTCCTCTTCTGACCACTGCAGGCACTT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS CCA 90 bp | GGACATTGGGGCCACAGTAAGACAGACTGGCAATGCATGTTGTTTTaGCCACTGAGACAATCAGCCCACCTAGCCATGAAGACAAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GHWGHSKTDWQCMLF*PLRQSAHLAMKTRL Trigger: TAGCCTTGTCTTCATGGCTAGGTGGGCTGATTGTCTCAGTGGCCAAAACAACATGCATTGCCAGTCTGTCTTACTGTGGCCCCAATGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000086319.5 ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGTGGTCAGAAGAGGACACCAGCTGCACTGGAGTTGCAGTTACAGGCTGTATAAAGAAGAAGAGTaGTGTCATGCAGAGTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PAVVRRGHQLHWSCSYRLYKEEE*CHAECE Trigger: TTCACACTCTGCATGACACAACTCTTCTTCTTTATA...CAGCCTGTAACTGCAACTCCAGTGCAGCTGGTGTCCTCTTCTGACCACTGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CAA 90 bp | TTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGTCAGAGGACAGACAGCACCTTGTaGAGGTCCATGGACTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FHQTTPLDLKECLVHGQRTDSTL*RSMDLM Trigger: CATCAAGTCCATGGACCTCAACAAGGTGCTGTCTGT...CCTCTGACCATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CAA 90 bp | TTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGTCAGAGGGCAATGCATGTTGTTTaGGCCACTGAGACAATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FHQTTPLDLKECLVHGQRAMHVV*ATETIS Trigger: GCTGATTGTCTCAGTGGCCAAAACAACATGCATTGC...CCTCTGACCATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CAA 90 bp | GTATTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGTCAGATGACAGACAGCACCTaGTTGAGGTCCATGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VFHQTTPLDLKECLVHGQMTDST*LRSMDL Trigger: CAAGTCCATGGACCTCAACAAGGTGCTGTCTGTCAT...CTGACCATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CAA 90 bp | ATAGAGGTATTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATACAGACAGCACCTTGTaGAGGTCCATGGACTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: IEVFHQTTPLDLKECLVHTDSTL*RSMDLM Trigger: CATCAAGTCCATGGACCTCAACAAGGTGCTGTCTGT...ATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAATACCTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTAGCTGATTGCTCATCCAATGGGAAGACTATAAATGGAGTGCAGAGTTTTACAGACAGCACCTTGTaGAGGTCCATGGACTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TVADCSSNGKTINGVQSFTDSTL*RSMDLM Trigger: CATCAAGTCCATGGACCTCAACAAGGTGCTGTCTGT...AAAACTCTGCACTCCATTTATAGTCTTCCCATTGGATGAGCAATCAGCTACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGTCATCTAGGAATAAAAATGATGGGATGCTCAAGCCACAAACTTTGGATGACAGACAGCACCTaGTTGAGGTCCATGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CVSHLGIKMMGCSSHKLWMTDST*LRSMDL Trigger: CAAGTCCATGGACCTCAACAAGGTGCTGTCTGTCAT...CCAAAGTTTGTGGCTTGAGCATCCCATCATTTTTATTCCTAGATGACTGACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTATTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATGGTTATAAAGAAGAAGAGTaGTGTCATGCAGAGTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EVFHQTTPLDLKECLVHGYKEEE*CHAECE Trigger: TTCACACTCTGCATGACACAACTCTTCTTCTTTATA...ACCATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAATACCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CAA 90 bp | ATAGAGGTATTCCACCAAACTACACCGCTAGACCTTAAGGAATGTTTGGTGCATTATAAAGAAGAAGAGTaGTGTCATGCAGAGTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IEVFHQTTPLDLKECLVHYKEEE*CHAECE Trigger: TTCACACTCTGCATGACACAACTCTTCTTCTTTATA...ATGCACCAAACATTCCTTAAGGTCTAGCGGTGTAGTTTGGTGGAATACCTCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGTGCAAAAACCTGGTCCAATCTTCTACTGAAACTTGGTATAGAAGAGCATTATAAAGAAGAAGAGTaGTGTCATGCAGAGTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KGAKTWSNLLLKLGIEEHYKEEE*CHAECE Trigger: TTCACACTCTGCATGACACAACTCTTCTTCTTTATA...ATGCTCTTCTATACCAAGTTTCAGTAGAAGATTGGACCAGGTTTTTGCACCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS TCA 72 bp | GATGCGGCTGGGGCGGCAATAGATGAAGAGAGCTGCTaGGTAAAAGATGCCCACCACTACCAGATGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: DAAGAAIDEESC*VKDAHHYQMGG Trigger: GCCTCCCATCTGGTAGTGGTGGGCATCTTTTACTCAGCAGCTCTCTTCATCTATTGCCGCCCCAGCCGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000086319.5 ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS CAA 72 bp | CATTGGGGCCACAGTAAGACAGACTGGCAATGCATGTaGTTTTGGCCACTGAGACAATCAGCCCACCTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HWGHSKTDWQCM*FWPLRQSAHLA Trigger: GGCTAGGTGGGCTGATTGTCTCAGTGGCCAAAACAACATGCATTGCCAGTCTGTCTTACTGTGGCCCCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000086319.5 ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS CAA 90 bp | CAAGAGGGTGCACTCTGTGCAGATGAGGACTATAAAGAAGAAGAGTaGTGTCATGCAGAGTGTGAAGGGAATGTGGTAGGGCCCCGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QEGALCADEDYKEEE*CHAECEGNVVGPRP Trigger: TGGACGGGGCCCTACCACATTCCCTTCACACTCTGCATGACACAACTCTTCTTCTTTATAGTCCTCATCTGCACAGAGTGCACCCTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000086319.5 ENSMUST00000207624.2 ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000209097.2 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS CCA 72 bp | GGCCACAGTAAGACAGACTGGCAATGCATGTTGTTTTaGCCACTGAGACAATCAGCCCACCTAGCCATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GHSKTDWQCMLF*PLRQSAHLAMK Trigger: CTTCATGGCTAGGTGGGCTGATTGTCTCAGTGGCCAAAACAACATGCATTGCCAGTCTGTCTTACTGTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086319.5 ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||
| CDS CAA 72 bp | GCACTCTGTGCAGATGAGGACTATAAAGAAGAAGAGTaGTGTCATGCAGAGTGTGAAGGGAATGTGGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ALCADEDYKEEE*CHAECEGNVVG Trigger: CCCTACCACATTCCCTTCACACTCTGCATGACACAACTCTTCTTCTTTATAGTCCTCATCTGCACAGAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000086319.5 ENSMUST00000207624.2 ENSMUST00000208066.3 ENSMUST00000209029.4 ENSMUST00000209097.2 ENSMUST00000213549.2 ENSMUST00000214383.2 |
||