Pregenerated sensors for OLFR1347 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034583Ensembl transcript IDs: ENSMUST00000036357.7, ENSMUST00000207339.4, ENSMUST00000209055.2, ENSMUST00000220413.2
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GGTTTTAGTTCACATTTAAAGATTACTAGTAATGGCTaGGCCATGAAAGATTTGAACCAGGGTGGGAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: GFSSHLKITSNG*AMKDLNQGGRG Trigger: ACCTCTCCCACCCTGGTTCAAATCTTTCATGGCCCAGCCATTACTAGTAATCTTTAAATGTGAACTAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| 3UTR GCA 72 bp | TTGTTCAAACAATGCCTCAGTAAGCTTGTAATTTTCTaGATAGTATCTGTTTATCCTTGTAGACTTCTACTG | + |
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Preference number: 3 (lower is better) Translates to: LFKQCLSKLVIF*IVSVYPCRLLL Trigger: CAGTAGAAGTCTACAAGGATAAACAGATACTATGCAGAAAATTACAAGCTTACTGAGGCATTGTTTGAACAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS-3UTR TCA 90 bp | AAGATTACTAGTAATGGCTGGGCCATGAAAGATTTGAACCAGGGTGGGAGAGGTAGACCTGTGGCCTCATaGGCAGTGGGTAGTGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: KITSNGWAMKDLNQGGRGRPVAS*AVGSVV Trigger: CACTACACTACCCACTGCTCATGAGGCCACAGGTCT...ACCTCTCCCACCCTGGTTCAAATCTTTCATGGCCCAGCCATTACTAGTAATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS-3UTR CCA 90 bp | AAGATTACTAGTAATGGCTGGGCCATGAAAGATTTGAACCAGGGTGGGAGAGGTGTCCCACGAGTAAGGTaGGCATGGTGGCTGACACAT | + |
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Preference number: 4 (lower is better) Translates to: KITSNGWAMKDLNQGGRGVPRVR*AWWLTH Trigger: ATGTGTCAGCCACCATGCCCACCTTACTCGTGGGAC...ACCTCTCCCACCCTGGTTCAAATCTTTCATGGCCCAGCCATTACTAGTAATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS-3UTR TCA 90 bp | AAGATTACTAGTAATGGCTGGGCCATGAAAGATTTGAACCAGGGTGGGAGAGGTGGGTACAGGACAAATTaGGCAGAGGGGAGACATCAC | + |
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Preference number: 4 (lower is better) Translates to: KITSNGWAMKDLNQGGRGGYRTN*AEGRHH Trigger: GTGATGTCTCCCCTCTGCTCAATTTGTCCTGTACCC...ACCTCTCCCACCCTGGTTCAAATCTTTCATGGCCCAGCCATTACTAGTAATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS-3UTR CCA 90 bp | AAGATTACTAGTAATGGCTGGGCCATGAAAGATTTGAACCAGGGTGGGAGAGGTCGAGTAAGGTGGGCATaGTGGCTGACACATAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KITSNGWAMKDLNQGGRGRVRWA*WLTHST Trigger: TGTGCTATGTGTCAGCCACCATGCCCACCTTACTCG...ACCTCTCCCACCCTGGTTCAAATCTTTCATGGCCCAGCCATTACTAGTAATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS-3UTR TCA 90 bp | CAATGCCTCAGTAAGCTTGTAATTTTCTGCATAGTATCTGTTTATCCTTGTAGAAGTCTACCAGCTCTGTaGGGGCCACATGGGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: QCLSKLVIFCIVSVYPCRSLPAL*GPHGYR Trigger: CCTGTACCCATGTGGCCCTCACAGAGCTGGTAGACT...TCTACAAGGATAAACAGATACTATGCAGAAAATTACAAGCTTACTGAGGCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS-3UTR TCA 90 bp | CAATGCCTCAGTAAGCTTGTAATTTTCTGCATAGTATCTGTTTATCCTTGTAGAACATCTCCAGGCAGCTaGGGTTGCCCAGGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QCLSKLVIFCIVSVYPCRTSPGS*GCPGRS Trigger: ACTTCTTCCTGGGCAACCTCAGCTGCCTGGAGATGT...TCTACAAGGATAAACAGATACTATGCAGAAAATTACAAGCTTACTGAGGCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| 3UTR CAA 72 bp | TTAAAGATTACTAGTAATGGCTGGGCCATGAAAGATTaGAACCAGGGTGGGAGAGGTTCACATATGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LKITSNGWAMKD*NQGGRGSHMED Trigger: ATCTTCCATATGTGAACCTCTCCCACCCTGGTTCAAATCTTTCATGGCCCAGCCATTACTAGTAATCTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS-3UTR TCA 90 bp | CAATGCCTCAGTAAGCTTGTAATTTTCTGCATAGTATCTGTTTATCCTTGTAGATGGGGCGGCAATAGATaGAGAGAGCTGCTGAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: QCLSKLVIFCIVSVYPCRWGGNR*RELLSK Trigger: TTTACTCAGCAGCTCTCTTCATCTATTGCCGCCCCA...TCTACAAGGATAAACAGATACTATGCAGAAAATTACAAGCTTACTGAGGCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS-3UTR CCA 90 bp | CAATGCCTCAGTAAGCTTGTAATTTTCTGCATAGTATCTGTTTATCCTTGTAGAGTAAGGTGGGCATGGTaGCTGACACATAGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: QCLSKLVIFCIVSVYPCRVRWAW*LTHSTS Trigger: AGATGTGCTATGTGTCAGCCACCATGCCCACCTTAC...TCTACAAGGATAAACAGATACTATGCAGAAAATTACAAGCTTACTGAGGCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS-3UTR CCA 90 bp | CAATGCCTCAGTAAGCTTGTAATTTTCTGCATAGTATCTGTTTATCCTTGTAGAGGACTCTGGTCATGTTaGTCAACTCAAGTGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QCLSKLVIFCIVSVYPCRGLWSC*STQVMS Trigger: AGACATCACTTGAGTTGACCAACATGACCAGAGTCC...TCTACAAGGATAAACAGATACTATGCAGAAAATTACAAGCTTACTGAGGCATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS-3UTR TCA 90 bp | CAATGCCTCAGTAAGCTTGTAATTTTCTGCATAGTATCTGTTTATCCTTGTAGATGCACTCTGTGCATATaGGAGAGACAAAGAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: QCLSKLVIFCIVSVYPCRCTLCI*ERQRRR Trigger: TCTTCTTCTTTGTCTCTCTCATATGCACAGAGTGCA...TCTACAAGGATAAACAGATACTATGCAGAAAATTACAAGCTTACTGAGGCATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS-3UTR CCA 90 bp | CAATGCCTCAGTAAGCTTGTAATTTTCTGCATAGTATCTGTTTATCCTTGTAGACAAACTGTTGGACTCTaGTCATGTTGGTCAACTCAA | + |
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Preference number: 4 (lower is better) Translates to: QCLSKLVIFCIVSVYPCRQTVGL*SCWSTQ Trigger: TTGAGTTGACCAACATGACCAGAGTCCAACAGTTTG...TCTACAAGGATAAACAGATACTATGCAGAAAATTACAAGCTTACTGAGGCATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS-3UTR GCA 90 bp | CAATGCCTCAGTAAGCTTGTAATTTTCTGCATAGTATCTGTTTATCCTTGTAGAACAGTAGATCAGGCTTaGAATGCATTTTGTCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: QCLSKLVIFCIVSVYPCRTVDQA*NAFCLY Trigger: ATAAAGACAAAATGCATTGCAAGCCTGATCTACTGT...TCTACAAGGATAAACAGATACTATGCAGAAAATTACAAGCTTACTGAGGCATTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207339.4 |
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| CDS CCA 72 bp | GCTGAGATGAAGTCTACCAGCTCTGTGAGGGCCACATaGGTACAGGACAAATTGAGCAGAGGGGAGACATCA | + |
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Preference number: 6 (lower is better) Translates to: AEMKSTSSVRAT*VQDKLSRGETS Trigger: TGATGTCTCCCCTCTGCTCAATTTGTCCTGTACCCATGTGGCCCTCACAGAGCTGGTAGACTTCATCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036357.7 ENSMUST00000207339.4 ENSMUST00000220413.2 |
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| CDS CAA 72 bp | CATTGGGACCACAGTAGATCAGGCTTGCAATGCATTTaGTCTTTATCGCCGAGACCACAAGGCCACCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: HWDHSRSGLQCI*SLSPRPQGHPA Trigger: GGCTGGGTGGCCTTGTGGTCTCGGCGATAAAGACAAAATGCATTGCAAGCCTGATCTACTGTGGTCCCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036357.7 ENSMUST00000207339.4 ENSMUST00000220413.2 |
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| CDS GCA 72 bp | TTGGTTGAGGACATTGGGACCACAGTAGATCAGGCTTaGAATGCATTTTGTCTTTATCGCCGAGACCACAAG | + |
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Preference number: 6 (lower is better) Translates to: LVEDIGTTVDQA*NAFCLYRRDHK Trigger: CTTGTGGTCTCGGCGATAAAGACAAAATGCATTGCAAGCCTGATCTACTGTGGTCCCAATGTCCTCAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036357.7 ENSMUST00000207339.4 ENSMUST00000220413.2 |
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| CDS CCA 72 bp | CCCAGCCTTGTAGGAAAACCTAACAGCACAAACTGTTaGACTCTGGTCATGTTGGTCAACTCAAGTGATGTC | + |
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Preference number: 6 (lower is better) Translates to: PSLVGKPNSTNC*TLVMLVNSSDV Trigger: GACATCACTTGAGTTGACCAACATGACCAGAGTCCAACAGTTTGTGCTGTTAGGTTTTCCTACAAGGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036357.7 ENSMUST00000207339.4 ENSMUST00000209055.2 ENSMUST00000220413.2 |
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| CDS CCA 72 bp | AACCTAACAGCACAAACTGTTGGACTCTGGTCATGTTaGTCAACTCAAGTGATGTCTCCATCTGTGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: NLTAQTVGLWSC*STQVMSPSVES Trigger: GCTCTCCACAGATGGAGACATCACTTGAGTTGACCAACATGACCAGAGTCCAACAGTTTGTGCTGTTAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220413.2 |
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