Pregenerated sensors for OLFR1346 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054938Ensembl transcript IDs: ENSMUST00000056144.7, ENSMUST00000207658.4, ENSMUST00000215302.3
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGCAGCCTTTGTATCCACTCCTGCTCTATTTGAGTTCCTGTCCTaGCTTCCTTCAATAATGAACAATAATGTGGAAGTGAAAGCCAAA | + |
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Preference number: 1 (lower is better) Translates to: EAAFVSTPALFEFLS*LPSIMNNNVEVKAK Trigger: TTTGGCTTTCACTTCCACATTATTGTTCATTATTGAAGGAAGTCAGGACAGGAACTCAAATAGAGCAGGAGTGGATACAAAGGCTGCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR CCA 90 bp | AGAGAAACAAACAGCAGGTTGTCTGTGTACAGAACACCCACACAATaGAATACTATGATGTCATTAGAAAGGTTATTTACGTCTCATGAA | + |
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Preference number: 1 (lower is better) Translates to: RETNSRLSVYRTPTQ*NTMMSLERLFTSHE Trigger: TTCATGAGACGTAAATAACCTTTCTAATGACATCATAGTATTCCATTGTGTGGGTGTTCTGTACACAGACAACCTGCTGTTTGTTTCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | ATGAATGTGGGAGGGCACAGCCCATTGTGGGTGGTATCACCCCCTAGGCTGGTGGCCTGGTCTACAAAGTaGGTTCGAGGACAGCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: MNVGGHSPLWVVSPPRLVAWSTK*VRGQPR Trigger: CCTTGGCTGTCCTCGAACTCACTTTGTAGACCAGGC...CACCAGCCTAGGGGGTGATACCACCCACAATGGGCTGTGCCCTCCCACATTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAAGCCTGGTCTACAAAGTaGGTTCGAGGACAGCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: GRPLNFPPVNCSDPFRPEAWSTK*VRGQPR Trigger: CCTTGGCTGTCCTCGAACTCACTTTGTAGACCAGGC...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | ATGAATGTGGGAGGGCACAGCCCATTGTGGGTGGTATCACCCCCTAGGCTGGTGCACTCCTGCTCTATTTaGGTTCCTGTCCTGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: MNVGGHSPLWVVSPPRLVHSCSI*VPVLTS Trigger: GGAAGTCAGGACAGGAACTCAAATAGAGCAGGAGTG...CACCAGCCTAGGGGGTGATACCACCCACAATGGGCTGTGCCCTCCCACATTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR CCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAAACTCAACCACCTACCTaGGCTGACTCCCCCATGTCA | + |
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Preference number: 2 (lower is better) Translates to: GRPLNFPPVNCSDPFRPETQPPT*ADSPMS Trigger: TGACATGGGGGAGTCAGCCCAGGTAGGTGGTTGAGT...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAATTGCCTCCAGAGTACTaGGATTTAAGGCATGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GRPLNFPPVNCSDPFRPELPPEY*DLRHEP Trigger: TGGCTCATGCCTTAAATCTCAGTACTCTGGAGGCAA...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR GCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAATCCATAAGATCTGGCTaGAGGCAAGCATGTGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: GRPLNFPPVNCSDPFRPESIRSG*RQACEA Trigger: AGCTTCACATGCTTGCCTGCAGCCAGATCTTATGGA...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR GCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAATTTTTGCCCCCAAGTTaGTTTGGTCGTGGTGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: GRPLNFPPVNCSDPFRPEFLPPS*FGRGVS Trigger: TGAAACACCACGACCAAAGCAACTTGGGGGCAAAAA...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR GCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAAATACACATGCCACCATaGATGTGTGAAATCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: GRPLNFPPVNCSDPFRPEIHMPP*MCEIRG Trigger: ACCTCTGATTTCACACATGCATGGTGGCATGTGTAT...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAAATGTGTATTTGGCCATaGATTGGTTTCCAAACAAGG | + |
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Preference number: 2 (lower is better) Translates to: GRPLNFPPVNCSDPFRPEMCIWP*IGFQTR Trigger: CCTTGTTTGGAAACCAATTCATGGCCAAATACACAT...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAACAAAGTATAGTCATCTaGGAGGAGAAAATGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: GRPLNFPPVNCSDPFRPEQSIVI*EEKMLP Trigger: TGGAAGCATTTTCTCCTCTCAGATGACTATACTTTG...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAATGTCTGGATACTTTCTaGGGAACATTTGATCATATG | + |
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Preference number: 2 (lower is better) Translates to: GRPLNFPPVNCSDPFRPECLDTF*GTFDHM Trigger: CATATGATCAAATGTTCCTCAGAAAGTATCCAGACA...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTCTGGGTCATCAGGCTTaGGAGAAACTGTCTTTACCC | + |
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Preference number: 2 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPLGHQA*EKLSLP Trigger: GGGTAAAGACAGTTTCTCTCAAGCCTGATGACCCAG...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGGTGATCCTGAGTTGTATAAGCCATGATGAGGAAGCAGCCTTTGTATCCTTTGAGTTCCTGTCCTaGCTTCCTTCAATAATGAAC | + |
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Preference number: 2 (lower is better) Translates to: RLVILSCISHDEEAAFVSFEFLS*LPSIMN Trigger: GTTCATTATTGAAGGAAGTCAGGACAGGAACTCAAA...GGATACAAAGGCTGCTTCCTCATCATGGCTTATACAACTCAGGATCACCAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTCGTATTGCGCAGACGTaGGAACTTGAGAATGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPRIAQT*ELENEQ Trigger: TTGCTCATTCTCAAGTTCCCACGTCTGCGCAATACG...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTAGAAATACAGAGAAACAAACAGCAGGTTGTCTGTGTACAGAACACCCAAGACCAGGCTGGTCTTaGACTCACAAAATATTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LSRNTEKQTAGCLCTEHPRPGWS*THKILP Trigger: AGGCAATATTTTGTGAGTTCAAGACCAGCCTGGTCT...TGGGTGTTCTGTACACAGACAACCTGCTGTTTGTTTCTCTGTATTTCTAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTGCATCCACCCAGCTATaGGAAAAGTTCATAAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPASTQL*EKFIKV Trigger: AACCTTTATGAACTTTTCTCATAGCTGGGTGGATGC...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR GCA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTATACACATGCCACCATaGATGTGTGAAATCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPIHMPP*MCEIRG Trigger: ACCTCTGATTTCACACATGCATGGTGGCATGTGTAT...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR GCA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTTCTGAGAGGAGAAAATaGTTCCATAAGATCTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPSERRK*FHKIWL Trigger: CAGCCAGATCTTATGGAAGCATTTTCTCCTCTCAGA...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTATGTGTATTTGGCCATaGATTGGTTTCCAAACAAGG | + |
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Preference number: 2 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPMCIWP*IGFQTR Trigger: CCTTGTTTGGAAACCAATTCATGGCCAAATACACAT...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTCTGCAGGCAAGCATGTaGAGCTTAATTAATGATGAA | + |
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Preference number: 2 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPLQASM*SLINDE Trigger: TTCATCATTAATTAAGCTTCACATGCTTGCCTGCAG...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTAGAAATACAGAGAAACAAACAGCAGGTTGTCTGTGTACAGAACACCCACATACCCATTTCTCTTaGGTGACTGTCAACACAAAT | + |
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Preference number: 2 (lower is better) Translates to: LSRNTEKQTAGCLCTEHPHTHFS*VTVNTN Trigger: ATTTGTGTTGACAGTCACTCAAGAGAAATGGGTATG...TGGGTGTTCTGTACACAGACAACCTGCTGTTTGTTTCTCTGTATTTCTAGACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTTGTCTGTCTGTATATTaGAGTATACACATGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPCLSVY*SIHMPP Trigger: TGGTGGCATGTGTATACTCCAATATACAGACAGACA...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTAGAAATACAGAGAAACAAACAGCAGGTTGTCTGTGTACAGAACACCCATGTCTGTCTGTATATTaGAGTATACACATGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: LSRNTEKQTAGCLCTEHPCLSVY*SIHMPP Trigger: TGGTGGCATGTGTATACTCCAATATACAGACAGACA...TGGGTGTTCTGTACACAGACAACCTGCTGTTTGTTTCTCTGTATTTCTAGACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTTGTCTGGATACTTTCTaGGGAACATTTGATCATATG | + |
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Preference number: 2 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPCLDTF*GTFDHM Trigger: CATATGATCAAATGTTCCTCAGAAAGTATCCAGACA...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR CAA 90 bp | TCTAGAAACATCTATCATGTTTCTTTGGAATTTCTTTATGTGTATTaGGCCATGAATTGGTTTCCAAACAAGGAGAGAAAGGACATCAGC | + |
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Preference number: 2 (lower is better) Translates to: SRNIYHVSLEFLYVY*AMNWFPNKERKDIS Trigger: GCTGATGTCCTTTCTCTCCTTGTTTGGAAACCAATTCATGGCCAAATACACATAAAGAAATTCCAAAGAAACATGATAGATGTTTCTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR CAA 90 bp | ATGAAAGACGTTAATCAAACTGTCTGGATACTTTCTGAGGAACATTaGATCATATGCATGAAAAACTACAAACCTTATGGGTTCTGCGAT | + |
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Preference number: 2 (lower is better) Translates to: MKDVNQTVWILSEEH*IICMKNYKPYGFCD Trigger: ATCGCAGAACCCATAAGGTTTGTAGTTTTTCATGCATATGATCAAATGTTCCTCAGAAAGTATCCAGACAGTTTGATTAACGTCTTTCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR CAA 90 bp | ATGAATGTGGGAGGGCACAGCCCATTGTGGGTGGTATCACCCCCTAGGCTGGTGCCTGGGTCATCAGGCTaGAGAGAAACTGTCTTTACC | + |
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Preference number: 3 (lower is better) Translates to: MNVGGHSPLWVVSPPRLVPGSSG*RETVFT Trigger: GGTAAAGACAGTTTCTCTCAAGCCTGATGACCCAGG...CACCAGCCTAGGGGGTGATACCACCCACAATGGGCTGTGCCCTCCCACATTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR GCA 72 bp | CAGGAGGGACGGCCCTTGAACTTTCCCCCAGTTAACTaGTCTGACCCTTTCAGGCCAGAACCAAAGGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: QEGRPLNFPPVN*SDPFRPEPKGS Trigger: ACTTCCCTTTGGTTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCCCTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR GCA 72 bp | GAGCATGAGAACCTGAATCCTGTTATCTACAGGAAATaGAGGGGGACGGTAACGGCGTATTGCGCAGACGTG | + |
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Preference number: 3 (lower is better) Translates to: EHENLNPVIYRK*RGTVTAYCADV Trigger: CACGTCTGCGCAATACGCCGTTACCGTCCCCCTGCATTTCCTGTAGATAACAGGATTCAGGTTCTCATGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR CAA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAAATGAGGAAGCAGCCTTaGTATCCACTCCTGCTCTAT | + |
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Preference number: 3 (lower is better) Translates to: GRPLNFPPVNCSDPFRPEMRKQP*YPLLLY Trigger: ATAGAGCAGGAGTGGATACAAAGGCTGCTTCCTCAT...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR TCA 72 bp | AGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTaGGTTCGAGGACAGCCAAGGCTACACATAGAAACC | + |
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Preference number: 3 (lower is better) Translates to: RFLSSRPAWSTK*VRGQPRLHIET Trigger: GGTTTCTATGTGTAGCCTTGGCTGTCCTCGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR TCA 72 bp | TATAATGTGAGTCCTGGGGACCTGGGTCATCAGGCTTaGGAGAAACTGTCTTTACCCACTGAGCCATCCTGT | + |
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Preference number: 3 (lower is better) Translates to: YNVSPGDLGHQA*EKLSLPTEPSC Trigger: ACAGGATGGCTCAGTGGGTAAAGACAGTTTCTCTCAAGCCTGATGACCCAGGTCCCCAGGACTCACATTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR CAA 90 bp | AGGCTGGTGATCCTGAGTTGTATAAGCCATGATGAGGAAGCAGCCTTTGTATCCCCTGGGTCATCAGGCTaGAGAGAAACTGTCTTTACC | + |
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Preference number: 3 (lower is better) Translates to: RLVILSCISHDEEAAFVSPGSSG*RETVFT Trigger: GGTAAAGACAGTTTCTCTCAAGCCTGATGACCCAGG...GGATACAAAGGCTGCTTCCTCATCATGGCTTATACAACTCAGGATCACCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR CAA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTCAGGAGGGACGGCCCTaGAACTTTCCCCCAGTTAAC | + |
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Preference number: 3 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPQEGRP*NFPPVN Trigger: GTTAACTGGGGGAAAGTTCAAGGGCCGTCCCTCCTG...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR-3UTR CAA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTGAAACAAACAGCAGGTaGTCTGTGTACAGAACACCC | + |
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Preference number: 3 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPETNSR*SVYRTP Trigger: GGGTGTTCTGTACACAGACAACCTGCTGTTTGTTTC...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR GCA 72 bp | TGTCTGTCTGTATATTGGAGTATACACATGCCACCATaGATGTGTGAAATCAGAGGTCAACCTGTGGATATC | + |
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Preference number: 3 (lower is better) Translates to: CLSVYWSIHMPP*MCEIRGQPVDI Trigger: GATATCCACAGGTTGACCTCTGATTTCACACATGCATGGTGGCATGTGTATACTCCAATATACAGACAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR GCA 72 bp | ACTGTCTGGATACTTTCTGAGGAACATTTGATCATATaGATGAAAAACTACAAACCTTATGGGTTCTGCGAT | + |
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Preference number: 3 (lower is better) Translates to: TVWILSEEHLII*MKNYKPYGFCD Trigger: ATCGCAGAACCCATAAGGTTTGTAGTTTTTCATGCATATGATCAAATGTTCCTCAGAAAGTATCCAGACAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR TCA 72 bp | CAAAATATTGCCTCCAGAGTACTGAGATTTAAGGCATaGGCCACCACATATAGCTTATTTCCTCTTTTAATT | + |
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Preference number: 3 (lower is better) Translates to: QNIASRVLRFKA*ATTYSLFPLLI Trigger: AATTAAAAGAGGAAATAAGCTATATGTGGTGGCTCATGCCTTAAATCTCAGTACTCTGGAGGCAATATTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR CCA 72 bp | ATCTTAGTAGCAATGAAAGACGTTAATCAAACTGTCTaGATACTTTCTGAGGAACATTTGATCATATGCATG | + |
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Preference number: 3 (lower is better) Translates to: ILVAMKDVNQTV*ILSEEHLIICM Trigger: CATGCATATGATCAAATGTTCCTCAGAAAGTATCCAGACAGTTTGATTAACGTCTTTCATTGCTACTAAGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAACCCATTACAAGGAGGTaGGAAGCACAGGTGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GRPLNFPPVNCSDPFRPEPITRR*EAQVER Trigger: CCTCTCCACCTGTGCTTCCCACCTCCTTGTAATGGG...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CCA 90 bp | CATCAGCTCTCTCAAGAATGTCAGCACAGAGCCGGGCATGGTGGCACACTCCTTCCCATTACAAGGAGGTaGGAAGCACAGGTGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: HQLSQECQHRAGHGGTLLPITRR*EAQVER Trigger: CCTCTCCACCTGTGCTTCCCACCTCCTTGTAATGGG...AAGGAGTGTGCCACCATGCCCGGCTCTGTGCTGACATTCTTGAGAGAGCTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR TCA 90 bp | ATGAATGTGGGAGGGCACAGCCCATTGTGGGTGGTATCACCCCCTAGGCTGGTGACATTTCCAGGCAGCTaGGATTGCCCAAGAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: MNVGGHSPLWVVSPPRLVTFPGS*DCPRRS Trigger: ACTTCTTCTTGGGCAATCTCAGCTGCCTGGAAATGT...CACCAGCCTAGGGGGTGATACCACCCACAATGGGCTGTGCCCTCCCACATTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAAAATCCCCAACAGACCTaGGGCCTCATGATCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: GRPLNFPPVNCSDPFRPENPQQT*GLMITE Trigger: CTCAGTGATCATGAGGCCCCAGGTCTGTTGGGGATT...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR TCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAACAGAGCAACCAGCAATaGCCCACAGAAGATGATGAT | + |
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Preference number: 4 (lower is better) Translates to: GRPLNFPPVNCSDPFRPEQSNQQ*PTEDDD Trigger: ATCATCATCTTCTGTGGGTCATTGCTGGTTGCTCTG...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR TCA 90 bp | CATCAGCTCTCTCAAGAATGTCAGCACAGAGCCGGGCATGGTGGCACACTCCTTTTGAGCCATGCAGAATaGAAAGGACACATGGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: HQLSQECQHRAGHGGTLLLSHAE*KGHMVR Trigger: CCTTACCATGTGTCCTTTTCATTCTGCATGGCTCAA...AAGGAGTGTGCCACCATGCCCGGCTCTGTGCTGACATTCTTGAGAGAGCTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR TCA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAATCTGTGGATTTGACATaGCTGGGCCTGGAATACATA | + |
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Preference number: 4 (lower is better) Translates to: GRPLNFPPVNCSDPFRPESVDLT*LGLEYI Trigger: TATGTATTCCAGGCCCAGTCATGTCAAATCCACAGA...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CCA 90 bp | AGGCTGGTGATCCTGAGTTGTATAAGCCATGATGAGGAAGCAGCCTTTGTATCCACACATGGTAAGGGCTaGACCTCAGGCCCACGAGTA | + |
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Preference number: 4 (lower is better) Translates to: RLVILSCISHDEEAAFVSTHGKG*TSGPRV Trigger: TACTCGTGGGCCTGAGGTCCAGCCCTTACCATGTGT...GGATACAAAGGCTGCTTCCTCATCATGGCTTATACAACTCAGGATCACCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR TCA 90 bp | AGGCTGGTGATCCTGAGTTGTATAAGCCATGATGAGGAAGCAGCCTTTGTATCCGGTGGGCATGGTGACTaGCACATAGCACATTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RLVILSCISHDEEAAFVSGGHGD*HIAHFQ Trigger: CTGGAAATGTGCTATGTGTCAGTCACCATGCCCACC...GGATACAAAGGCTGCTTCCTCATCATGGCTTATACAACTCAGGATCACCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR TCA 90 bp | CCATGCATGTGTGAAATCAGAGGTCAACCTGTGGATATCAGTCCACCCTTTTATAGTCGATCAGCTCTGTaGGGGCCACATGGGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: PCMCEIRGQPVDISPPFYSRSAL*GPHGYR Trigger: CCTGTACCCATGTGGCCCTCACAGAGCTGATCGACT...ATAAAAGGGTGGACTGATATCCACAGGTTGACCTCTGATTTCACACATGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR GCA 90 bp | CATCAGCTCTCTCAAGAATGTCAGCACAGAGCCGGGCATGGTGGCACACTCCTTACAGTAGGACAGACTTaGAATGCATGTGGTCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: HQLSQECQHRAGHGGTLLTVGQT*NACGLD Trigger: ATCAAGACCACATGCATTGCAAGTCTGTCCTACTGT...AAGGAGTGTGCCACCATGCCCGGCTCTGTGCTGACATTCTTGAGAGAGCTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CCA 90 bp | ACATGCCACCATGCATGTGTGAAATCAGAGGTCAACCTGTGGATATCAGTCCACAATCCCCAACAGACCTaGGGCCTCATGATCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: TCHHACVKSEVNLWISVHNPQQT*GLMITE Trigger: CTCAGTGATCATGAGGCCCCAGGTCTGTTGGGGATT...GTGGACTGATATCCACAGGTTGACCTCTGATTTCACACATGCATGGTGGCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CCA 90 bp | AGGCTGGTGATCCTGAGTTGTATAAGCCATGATGAGGAAGCAGCCTTTGTATCCTCTGTGAGGGCCACATaGGTACAGGACAAATTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RLVILSCISHDEEAAFVSSVRAT*VQDKLS Trigger: GCTCAATTTGTCCTGTACCCATGTGGCCCTCACAGA...GGATACAAAGGCTGCTTCCTCATCATGGCTTATACAACTCAGGATCACCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR TCA 90 bp | AGGCTGGTGATCCTGAGTTGTATAAGCCATGATGAGGAAGCAGCCTTTGTATCCCAGAGCAACCAGCAATaGCCCACAGAAGATGATGAT | + |
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Preference number: 4 (lower is better) Translates to: RLVILSCISHDEEAAFVSQSNQQ*PTEDDD Trigger: ATCATCATCTTCTGTGGGTCATTGCTGGTTGCTCTG...GGATACAAAGGCTGCTTCCTCATCATGGCTTATACAACTCAGGATCACCAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR GCA 90 bp | CATCAGCTCTCTCAAGAATGTCAGCACAGAGCCGGGCATGGTGGCACACTCCTTAAAACAGTTGAGCCATaGAGAATGAAAAGGACACAT | + |
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Preference number: 4 (lower is better) Translates to: HQLSQECQHRAGHGGTLLKTVEP*RMKRTH Trigger: ATGTGTCCTTTTCATTCTGCATGGCTCAACTGTTTT...AAGGAGTGTGCCACCATGCCCGGCTCTGTGCTGACATTCTTGAGAGAGCTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR TCA 90 bp | CTGTATATTGGAGTATACACATGCCACCATGCATGTGTGAAATCAGAGGTCAACGGTGGGCATGGTGACTaGCACATAGCACATTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LYIGVYTCHHACVKSEVNGGHGD*HIAHFQ Trigger: CTGGAAATGTGCTATGTGTCAGTCACCATGCCCACC...GTTGACCTCTGATTTCACACATGCATGGTGGCATGTGTATACTCCAATATACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR GCA 90 bp | AGGCTGGTGATCCTGAGTTGTATAAGCCATGATGAGGAAGCAGCCTTTGTATCCACAGTAGGACAGACTTaGAATGCATGTGGTCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: RLVILSCISHDEEAAFVSTVGQT*NACGLD Trigger: ATCAAGACCACATGCATTGCAAGTCTGTCCTACTGT...GGATACAAAGGCTGCTTCCTCATCATGGCTTATACAACTCAGGATCACCAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CCA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTTCTGTGAGGGCCACATaGGTACAGGACAAATTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPSVRAT*VQDKLS Trigger: GCTCAATTTGTCCTGTACCCATGTGGCCCTCACAGA...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR TCA 90 bp | CTGTATATTGGAGTATACACATGCCACCATGCATGTGTGAAATCAGAGGTCAACACATTTCCAGGCAGCTaGGATTGCCCAAGAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LYIGVYTCHHACVKSEVNTFPGS*DCPRRS Trigger: ACTTCTTCTTGGGCAATCTCAGCTGCCTGGAAATGT...GTTGACCTCTGATTTCACACATGCATGGTGGCATGTGTATACTCCAATATACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR TCA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTTCTGTGGATTTGACATaGCTGGGCCTGGAATACATA | + |
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Preference number: 4 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPSVDLT*LGLEYI Trigger: TATGTATTCCAGGCCCAGTCATGTCAAATCCACAGA...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| 3UTR CAA 72 bp | TTTTCTCATAACAAGAACACTCTTCAGAAGAAGGAATaGTTTATCAGCAGACCCAAGGACATCCTCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: FSHNKNTLQKKE*FISRPKDILLS Trigger: GGAGAGGAGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTGTTATGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR GCA 90 bp | CCATGCATGTGTGAAATCAGAGGTCAACCTGTGGATATCAGTCCACCCTTTTATAAAACAGTTGAGCCATaGAGAATGAAAAGGACACAT | + |
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Preference number: 4 (lower is better) Translates to: PCMCEIRGQPVDISPPFYKTVEP*RMKRTH Trigger: ATGTGTCCTTTTCATTCTGCATGGCTCAACTGTTTT...ATAAAAGGGTGGACTGATATCCACAGGTTGACCTCTGATTTCACACATGCATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CCA 90 bp | CAAGAACACTCTTCAGAAGAAGGAATTGTTTATCAGCAGACCCAAGGACATCCTAGTAGAATAAAATCCTaGTCATCAGACCTATTGGCC | + |
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Preference number: 4 (lower is better) Translates to: QEHSSEEGIVYQQTQGHPSRIKS*SSDLLA Trigger: GGCCAATAGGTCTGATGACCAGGATTTTATTCTACT...AGGATGTCCTTGGGTCTGCTGATAAACAATTCCTTCTTCTGAAGAGTGTTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CCA 90 bp | CTGTATATTGGAGTATACACATGCCACCATGCATGTGTGAAATCAGAGGTCAACAGTAGAATAAAATCCTaGTCATCAGACCTATTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LYIGVYTCHHACVKSEVNSRIKS*SSDLLA Trigger: GGCCAATAGGTCTGATGACCAGGATTTTATTCTACT...GTTGACCTCTGATTTCACACATGCATGGTGGCATGTGTATACTCCAATATACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS TCA 90 bp | GGACATTGGGGCCACAGTAGGACAGACTTGCAATGCATGTGGTCTTaGTCGCAGAAACCAACAGTCCACCCACCCAGGAGGACAAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: GHWGHSRTDLQCMWS*SQKPTVHPPRRTRP Trigger: TGGCCTTGTCCTCCTGGGTGGGTGGACTGTTGGTTTCTGCGATCAAGACCACATGCATTGCAAGTCTGTCCTACTGTGGCCCCAATGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056144.7 ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CAA 90 bp | CATCAGCTCTCTCAAGAATGTCAGCACAGAGCCGGGCATGGTGGCACACTCCTTACTGACAGCACCTTGTaGAGGTCTGTGGATTTGACA | + |
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Preference number: 5 (lower is better) Translates to: HQLSQECQHRAGHGGTLLTDSTL*RSVDLT Trigger: TGTCAAATCCACAGACCTCAACAAGGTGCTGTCAGT...AAGGAGTGTGCCACCATGCCCGGCTCTGTGCTGACATTCTTGAGAGAGCTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CAA 90 bp | GGACGGCCCTTGAACTTTCCCCCAGTTAACTGCTCTGACCCTTTCAGGCCAGAAATGACTGACAGCACCTaGTTGAGGTCTGTGGATTTG | + |
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Preference number: 5 (lower is better) Translates to: GRPLNFPPVNCSDPFRPEMTDST*LRSVDL Trigger: CAAATCCACAGACCTCAACAAGGTGCTGTCAGTCAT...TTCTGGCCTGAAAGGGTCAGAGCAGTTAACTGGGGGAAAGTTCAAGGGCCGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CAA 90 bp | AGGCTGGTGATCCTGAGTTGTATAAGCCATGATGAGGAAGCAGCCTTTGTATCCACTGACAGCACCTTGTaGAGGTCTGTGGATTTGACA | + |
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Preference number: 5 (lower is better) Translates to: RLVILSCISHDEEAAFVSTDSTL*RSVDLT Trigger: TGTCAAATCCACAGACCTCAACAAGGTGCTGTCAGT...GGATACAAAGGCTGCTTCCTCATCATGGCTTATACAACTCAGGATCACCAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CAA 90 bp | AGGCTGGTGATCCTGAGTTGTATAAGCCATGATGAGGAAGCAGCCTTTGTATCCGCTGCTGAAGGCATTTaGATTAGTACCCTACCAATA | + |
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Preference number: 5 (lower is better) Translates to: RLVILSCISHDEEAAFVSAAEGI*ISTLPI Trigger: TATTGGTAGGGTACTAATCAAAATGCCTTCAGCAGC...GGATACAAAGGCTGCTTCCTCATCATGGCTTATACAACTCAGGATCACCAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS-3UTR CAA 90 bp | CTGTCTAGAAATACAGAGAAACAAACAGCAGGTTGTCTGTGTACAGAACACCCAGCTGCTGAAGGCATTTaGATTAGTACCCTACCAATA | + |
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Preference number: 5 (lower is better) Translates to: LSRNTEKQTAGCLCTEHPAAEGI*ISTLPI Trigger: TATTGGTAGGGTACTAATCAAAATGCCTTCAGCAGC...TGGGTGTTCTGTACACAGACAACCTGCTGTTTGTTTCTCTGTATTTCTAGACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS CCA 72 bp | GCTGAGATAAAGTCGATCAGCTCTGTGAGGGCCACATaGGTACAGGACAAATTGAGCAGAGGGGAGACATCA | + |
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Preference number: 6 (lower is better) Translates to: AEIKSISSVRAT*VQDKLSRGETS Trigger: TGATGTCTCCCCTCTGCTCAATTTGTCCTGTACCCATGTGGCCCTCACAGAGCTGATCGACTTTATCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056144.7 ENSMUST00000207658.4 ENSMUST00000215302.3 |
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| CDS TCA 72 bp | ACTGACAGCACCTTGTTGAGGTCTGTGGATTTGACATaGCTGGGCCTGGAATACATAAAGAGGACAACAGAG | + |
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Preference number: 6 (lower is better) Translates to: TDSTLLRSVDLT*LGLEYIKRTTE Trigger: CTCTGTTGTCCTCTTTATGTATTCCAGGCCCAGTCATGTCAAATCCACAGACCTCAACAAGGTGCTGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056144.7 ENSMUST00000207658.4 ENSMUST00000215302.3 |
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