RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1342 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000043383

Ensembl transcript IDs: ENSMUST00000060562.6, ENSMUST00000216226.2

Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGTCTCCCAGTCTACTTCACATTATTTTCAAATCCAGATTCCAGTaGTCATGTCAGATATTCAGCTGTGCCCATGCTGAACTGACATCA +
Preference number: 1 (lower is better)
Translates to: WSPSLLHIIFKSRFQ*SCQIFSCAHAELTS
Trigger: TGATGTCAGTTCAGCATGGGCACAGCTGAATATCTGACATGAGCACTGGAATCTGGATTTGAAAATAATGTGAAGTAGACTGGGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
3UTR GCA 90 bp TCCCTAACAGAATTTGTTTATCTAATTTTATGTGGATGGGTGTTTTaGCTGCATGTGTGCATGTATGCATGTGTGCATGTGTGCCTGTAT +
Preference number: 1 (lower is better)
Translates to: SLTEFVYLILCGWVF*LHVCMYACVHVCLY
Trigger: ATACAGGCACACATGCACACATGCATACATGCACACATGCAGGCAAAACACCCATCCACATAAAATTAGATAAACAAATTCTGTTAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
3UTR CAA 90 bp CTCCCTAACAGAATTTGTTTATCTAATTTTATGTGGATGGGTGTTTaGCCTGCATGTGTGCATGTATGCATGTGTGCATGTGTGCCTGTA +
Preference number: 2 (lower is better)
Translates to: LPNRICLSNFMWMGV*PACVHVCMCACVPV
Trigger: TACAGGCACACATGCACACATGCATACATGCACACATGCAGGCAAAACACCCATCCACATAAAATTAGATAAACAAATTCTGTTAGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
3UTR TCA 72 bp TCAGACAGTTGTGAACTGCCATGGGGTGCTGGGAACTaGACCCAAGTCTTCTCCAAGAGCCATCTCTCCAGC +
Preference number: 3 (lower is better)
Translates to: SDSCELPWGAGN*TQVFSKSHLSS
Trigger: GCTGGAGAGATGGCTCTTGGAGAAGACTTGGGTTCAGTTCCCAGCACCCCATGGCAGTTCACAACTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
3UTR TCA 72 bp CCTAGGTACTTGGAAGGAGAGGCAGGTGGATCTCTGTaGGTTCTAGGCCAGCCTGATTTAAACAGTGCATTC +
Preference number: 3 (lower is better)
Translates to: PRYLEGEAGGSL*VLGQPDLNSAF
Trigger: GAATGCACTGTTTAAATCAGGCTGGCCTAGAACTCACAGAGATCCACCTGCCTCTCCTTCCAAGTACCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
3UTR CCA 72 bp GGGACTCATAAAGTCTCACGCATCCCTGAGAGTCCCTaGGCTGTTAAGGGCATACTATTTTCTTCAGTGGTG +
Preference number: 3 (lower is better)
Translates to: GTHKVSRIPESP*AVKGILFSSVV
Trigger: CACCACTGAAGAAAATAGTATGCCCTTAACAGCCCAGGGACTCTCAGGGATGCGTGAGACTTTATGAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
3UTR TCA 72 bp CTCACAAACACTTGTAAGTCTGGCTCCAAGGGAATATaGCACCTCCACAGATTCCTGCACACACACACACAC +
Preference number: 3 (lower is better)
Translates to: LTNTCKSGSKGI*HLHRFLHTHTH
Trigger: GTGTGTGTGTGTGTGCAGGAATCTGTGGAGGTGTCATATTCCCTTGGAGCCAGACTTACAAGTGTTTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
3UTR TCA 72 bp GCTCATGTCAGATATTCAGCTGTGCCCATGCTGAACTaGCATCAACACCTAGACATATGGAAAAAGCCCATG +
Preference number: 3 (lower is better)
Translates to: AHVRYSAVPMLN*HQHLDIWKKPM
Trigger: CATGGGCTTTTTCCATATGTCTAGGTGTTGATGTCAGTTCAGCATGGGCACAGCTGAATATCTGACATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
3UTR CCA 72 bp AAGGACCTGAATTTTGTTCCTAGCAACCCTATTAGGTaGCTCACAAACACTTGTAAGTCTGGCTCCAAGGGA +
Preference number: 3 (lower is better)
Translates to: KDLNFVPSNPIR*LTNTCKSGSKG
Trigger: TCCCTTGGAGCCAGACTTACAAGTGTTTGTGAGCCACCTAATAGGGTTGCTAGGAACAAAATTCAGGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
3UTR-3UTR CAA 90 bp ATAATCCAATGGGGTGGGAGGAGCTGTAAGACTAAAGGAATATTTGAGCAGGAAATGTGGATGGGTGTTTaGCCTGCATGTGTGCATGTA +
Preference number: 3 (lower is better)
Translates to: IIQWGGRSCKTKGIFEQEMWMGV*PACVHV
Trigger: TACATGCACACATGCAGGCAAAACACCCATCCACAT...TTCCTGCTCAAATATTCCTTTAGTCTTACAGCTCCTCCCACCCCATTGGATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
3UTR GCA 72 bp GCCTTAGCTGATCCACAAGGGTGTGGAGAACCACACTaGACTATGGAGCTTATAACTTCCTTTTTAAAAATG +
Preference number: 3 (lower is better)
Translates to: ALADPQGCGEPH*TMELITSFLKM
Trigger: CATTTTTAAAAAGGAAGTTATAAGCTCCATAGTGCAGTGTGGTTCTCCACACCCTTGTGGATCAGCTAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
3UTR GCA 72 bp AGTCTACTTCACATTATTTTCAAATCCAGATTCCAGTaGTCATGTCAGATATTCAGCTGTGCCCATGCTGAA +
Preference number: 3 (lower is better)
Translates to: SLLHIIFKSRFQ*SCQIFSCAHAE
Trigger: TTCAGCATGGGCACAGCTGAATATCTGACATGAGCACTGGAATCTGGATTTGAAAATAATGTGAAGTAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
3UTR CCA 72 bp TTATTTATTTCACGACTCCAAGAGTTGATAATCCAATaGGGTGGGAGGAGCTGTAAGACTAAAGGAATATTT +
Preference number: 3 (lower is better)
Translates to: LFISRLQELIIQ*GGRSCKTKGIF
Trigger: AAATATTCCTTTAGTCTTACAGCTCCTCCCACCCCATTGGATTATCAACTCTTGGAGTCGTGAAATAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS-3UTR TCA 90 bp ATAATCCAATGGGGTGGGAGGAGCTGTAAGACTAAAGGAATATTTGAGCAGGAAACGTGGAGAAGGACTTaGGCCTCCCCTGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: IIQWGGRSCKTKGIFEQETWRRT*ASPGMS
Trigger: GCTCATCCCAGGGGAGGCTCAAGTCCTTCTCCACGT...TTCCTGCTCAAATATTCCTTTAGTCTTACAGCTCCTCCCACCCCATTGGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS-3UTR GCA 90 bp TCATGTCAGATATTCAGCTGTGCCCATGCTGAACTGACATCAACACCTAGACATAGATGGAGGCAAAGATaGAGGCATAGGAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SCQIFSCAHAELTSTPRHRWRQR*RHRRPG
Trigger: TCCTGGCCTCCTATGCCTGCATCTTTGCCTCCATCT...ATGTCTAGGTGTTGATGTCAGTTCAGCATGGGCACAGCTGAATATCTGACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS-3UTR CCA 90 bp CCCAATCCAAGTAAAAGTCACTTTCCCAGACTGAGCTTCAGTAGATCAGTCTCTGACTTGAGCCTCCCCTaGGATGAGCGGATTCTTAAG +
Preference number: 4 (lower is better)
Translates to: PNPSKSHFPRLSFSRSVSDLSLP*DERILK
Trigger: CTTAAGAATCCGCTCATCCCAGGGGAGGCTCAAGTC...AGAGACTGATCTACTGAAGCTCAGTCTGGGAAAGTGACTTTTACTTGGATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS-3UTR TCA 90 bp TCATGTCAGATATTCAGCTGTGCCCATGCTGAACTGACATCAACACCTAGACATCGTTGCCCAGGAGGGTaGTCATGTAGAGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SCQIFSCAHAELTSTPRHRCPGG*SCREEE
Trigger: TTCTTCTTCTCTACATGATCACCCTCCTGGGCAACG...ATGTCTAGGTGTTGATGTCAGTTCAGCATGGGCACAGCTGAATATCTGACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS-3UTR TCA 90 bp AAATTTAACAAGCAATGGTGGGACTTTTGTTTAGGAGTGGCCACAACCTCTCCTCCAGCAGCAGGAAGATaGACATCTGGGCTACACAAG +
Preference number: 4 (lower is better)
Translates to: KFNKQWWDFCLGVATTSPPAAGR*TSGLHK
Trigger: CTTGTGTAGCCCAGATGTTCATCTTCCTGCTGCTGG...AGGAGAGGTTGTGGCCACTCCTAAACAAAAGTCCCACCATTGCTTGTTAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS-3UTR TCA 90 bp GGAAAACTCATGTTATTCAGAACCGATGTCTTTAGCAAGCCAAAAGAGCTCCATCGGGCCTCATGTACATaGTCATGGCTGGCCCATAGA +
Preference number: 4 (lower is better)
Translates to: GKLMLFRTDVFSKPKELHRASCT*SWLAHR
Trigger: TCTATGGGCCAGCCATGATCATGTACATGAGGCCCG...ATGGAGCTCTTTTGGCTTGCTAAAGACATCGGTTCTGAATAACATGAGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS-3UTR GCA 90 bp CCCAATCCAAGTAAAAGTCACTTTCCCAGACTGAGCTTCAGTAGATCAGTCTCTATTGAAGGATGTGTCTaGACAGGCCAACTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: PNPSKSHFPRLSFSRSVSIEGCV*TGQLQD
Trigger: GTCCTGAAGTTGGCCTGTGCAGACACATCCTTCAAT...AGAGACTGATCTACTGAAGCTCAGTCTGGGAAAGTGACTTTTACTTGGATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS-3UTR CCA 90 bp AAATTTAACAAGCAATGGTGGGACTTTTGTTTAGGAGTGGCCACAACCTCTCCTGGAGATGGTCCTCCTTaGACACACCATGTTAACCAG +
Preference number: 4 (lower is better)
Translates to: KFNKQWWDFCLGVATTSPGDGPP*THHVNQ
Trigger: CTGGTTAACATGGTGTGTCCAAGGAGGACCATCTCC...AGGAGAGGTTGTGGCCACTCCTAAACAAAAGTCCCACCATTGCTTGTTAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS-3UTR CCA 90 bp TCATGTTATTCAGAACCGATGTCTTTAGCAAGCCAAAAGAGCTCCATTCAGTTGATGTTAACCAGCATCTaGGGCACAGTGGTAGTGACG +
Preference number: 4 (lower is better)
Translates to: SCYSEPMSLASQKSSIQLMLTSI*GTVVVT
Trigger: CGTCACTACCACTGTGCCCCAGATGCTGGTTAACAT...CAACTGAATGGAGCTCTTTTGGCTTGCTAAAGACATCGGTTCTGAATAACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS-3UTR CCA 90 bp ATTTTCAAATCCAGATTCCAGTGCTCATGTCAGATATTCAGCTGTGCCCATGCTGTACATGATCATGGCTaGCCCATAGAACATGGTGAC +
Preference number: 4 (lower is better)
Translates to: IFKSRFQCSCQIFSCAHAVHDHG*PIEHGD
Trigger: GTCACCATGTTCTATGGGCCAGCCATGATCATGTAC...AGCATGGGCACAGCTGAATATCTGACATGAGCACTGGAATCTGGATTTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS CCA 90 bp GGCAGAGACAACATTGTAGAACAGAGCCAGCTTCTTGTCCCGTTCTaGGTCATACCAAGAACCGGGCCTCATGTACATGATCATGGCTGG +
Preference number: 5 (lower is better)
Translates to: GRDNIVEQSQLLVPF*VIPRTGPHVHDHGW
Trigger: CCAGCCATGATCATGTACATGAGGCCCGGTTCTTGGTATGACCCAGAACGGGACAAGAAGCTGGCTCTGTTCTACAATGTTGTCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060562.6
ENSMUST00000216226.2
CDS-3UTR CAA 90 bp CCCAATCCAAGTAAAAGTCACTTTCCCAGACTGAGCTTCAGTAGATCAGTCTCTCACGTGGAGAAGGACTaGAGCCTCCCCTGGGATGAG +
Preference number: 5 (lower is better)
Translates to: PNPSKSHFPRLSFSRSVSHVEKD*SLPWDE
Trigger: CTCATCCCAGGGGAGGCTCAAGTCCTTCTCCACGTG...AGAGACTGATCTACTGAAGCTCAGTCTGGGAAAGTGACTTTTACTTGGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS-3UTR CAA 90 bp CCCAATCCAAGTAAAAGTCACTTTCCCAGACTGAGCTTCAGTAGATCAGTCTCTAACAGAGCCAGCTTCTaGTCCCGTTCTGGGTCATAC +
Preference number: 5 (lower is better)
Translates to: PNPSKSHFPRLSFSRSVSNRASF*SRSGSY
Trigger: GTATGACCCAGAACGGGACAAGAAGCTGGCTCTGTT...AGAGACTGATCTACTGAAGCTCAGTCTGGGAAAGTGACTTTTACTTGGATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS-3UTR CAA 90 bp ATAATCCAATGGGGTGGGAGGAGCTGTAAGACTAAAGGAATATTTGAGCAGGAAAAGTCCAAGCGGTCATaGAAGGATGTGTCTGCACAG +
Preference number: 5 (lower is better)
Translates to: IIQWGGRSCKTKGIFEQEKSKRS*KDVSAQ
Trigger: CTGTGCAGACACATCCTTCAATGACCGCTTGGACTT...TTCCTGCTCAAATATTCCTTTAGTCTTACAGCTCCTCCCACCCCATTGGATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216226.2
CDS CCA 72 bp CACTCAGCAATACCCAGCAGCAGGAAGATGAACATCTaGGCTACACAAGCACCCCAGGAGATGGTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: HSAIPSSRKMNI*ATQAPQEMVLL
Trigger: AAGGAGGACCATCTCCTGGGGTGCTTGTGTAGCCCAGATGTTCATCTTCCTGCTGCTGGGTATTGCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000060562.6
ENSMUST00000216226.2
CDS TCA 72 bp AGAGAACACACTCAGCAATACCCAGCAGCAGGAAGATaGACATCTGGGCTACACAAGCACCCCAGGAGATGG +
Preference number: 6 (lower is better)
Translates to: REHTQQYPAAGR*TSGLHKHPRRW
Trigger: CCATCTCCTGGGGTGCTTGTGTAGCCCAGATGTTCATCTTCCTGCTGCTGGGTATTGCTGAGTGTGTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000060562.6
ENSMUST00000216226.2