Pregenerated sensors for OLFR1341 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046790Ensembl transcript IDs: ENSMUST00000061215.6, ENSMUST00000214131.2, ENSMUST00000215117.3
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCTGTCAATTGAAAAGCCTATGGCCTATGGCTTGGGCAGGAAATaGAGGTGGGACATCTGGGAGGCAGAAAGGACTCTGGGAGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: HLSIEKPMAYGLGRK*RWDIWEAERTLGES Trigger: GCTCTCTCCCAGAGTCCTTTCTGCCTCCCAGATGTCCCACCTGCATTTCCTGCCCAAGCCATAGGCCATAGGCTTTTCAATTGACAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR GCA 90 bp | TGTTGTTGCTGTTGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGTTGTTGTTGTTTGTGGCCTTCTCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: CCCCCCCCCCCCCCC*CCCCCCCCLWPSQP Trigger: AGGCTGAGAAGGCCACAAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR GCA 90 bp | GAAGCACCTAGGCCCTATAGAACAAAGGAGAAAAGAGGACTGATGTaGCTGGGAGACAATTCACAGTGCCCCGTTCCACCAGCCAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: EAPRPYRTKEKRGLM*LGDNSQCPVPPAKD Trigger: GTCCTTGGCTGGTGGAACGGGGCACTGTGAATTGTCTCCCAGGCACATCAGTCCTCTTTTCTCCTTTGTTCTATAGGGCCTAGGTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR GCA 90 bp | TGTGGCCTTCTCAGCCTTGAGCAGGCTGAACAGACCTTGAACACTTaGCACAATGGAGCTTATTGTCCTTGGTGGAGTCACCTGCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: CGLLSLEQAEQTLNT*HNGAYCPWWSHLPW Trigger: CCAAGGCAGGTGACTCCACCAAGGACAATAAGCTCCATTGTGGCAAGTGTTCAAGGTCTGTTCAGCCTGCTCAAGGCTGAGAAGGCCACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR GCA 90 bp | AGGAATGGGCCAGGGCAAGATACACACTTCAAAGGCATGCCTTGGTaGCCACCTCCTCTAATCAGGCTCCACTTTCCACAGTATCCACCA | + |
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Preference number: 1 (lower is better) Translates to: RNGPGQDTHFKGMPW*PPPLIRLHFPQYPP Trigger: TGGTGGATACTGTGGAAAGTGGAGCCTGATTAGAGGAGGTGGGCACCAAGGCATGCCTTTGAAGTGTGTATCTTGCCCTGGCCCATTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
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| 3UTR TCA 90 bp | TTTGTGAAGCACCTAGGCCCTATAGAACAAAGGAGAAAAGAGGACTaGTGTGCCTGGGAGACAATTCACAGTGCCCCGTTCCACCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: FVKHLGPIEQRRKED*CAWETIHSAPFHQP Trigger: TGGCTGGTGGAACGGGGCACTGTGAATTGTCTCCCAGGCACATCAGTCCTCTTTTCTCCTTTGTTCTATAGGGCCTAGGTGCTTCACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR GCA 90 bp | ATGAAAGAGTGTTTTGCCTATGTACATGTAAGGGCACTGCGTGTGTaGCTGGTGCCCATGGAAACCAGAACAGGGCCCAGATCCCTTAGA | + |
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Preference number: 1 (lower is better) Translates to: MKECFAYVHVRALRV*LVPMETRTGPRSLR Trigger: TCTAAGGGATCTGGGCCCTGTTCTGGTTTCCATGGGCACCAGGCACACACGCAGTGCCCTTACATGTACATAGGCAAAACACTCTTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
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| 3UTR TCA 90 bp | ATGGAAACCAGAACAGGGCCCAGATCCCTTAGAACTGGACTGTTGTaGGCCACATGTGGGTGCTGGGAACTGAACATAAATCCTCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: METRTGPRSLRTGLL*ATCGCWELNINPLQ Trigger: TTGCAGAGGATTTATGTTCAGTTCCCAGCACCCACATGTGGCTCACAACAGTCCAGTTCTAAGGGATCTGGGCCCTGTTCTGGTTTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR GCA 90 bp | ACAAAGGAGAAAAGAGGACTGATGTGCCTGGGAGACAATTCACAGTaGCCCGTTCCACCAGCCAAGGACCTGAAAAGAGTTGAAATTAGA | + |
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Preference number: 1 (lower is better) Translates to: TKEKRGLMCLGDNSQ*PVPPAKDLKRVEIR Trigger: TCTAATTTCAACTCTTTTCAGGTCCTTGGCTGGTGGAACGGGGCACTGTGAATTGTCTCCCAGGCACATCAGTCCTCTTTTCTCCTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR GCA 90 bp | ACATCACCGGCAGTCATTTCATCCTCCTGCCTCGGGCTATATATGTaGTCTAGTACTTGTTCAACTGGGGTATCAACTACCAGAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: TSPAVISSSCLGLYM*SSTCSTGVSTTRGK Trigger: CTTTCCTCTGGTAGTTGATACCCCAGTTGAACAAGTACTAGAGCACATATATAGCCCGAGGCAGGAGGATGAAATGACTGCCGGTGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
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| 3UTR GCA 90 bp | CCTTCCTGTAAAGATGCATCCATACAATCTCGTGTATTGTATAGCTaGACCACCTGTCAATTGAAAAGCCTATGGCCTATGGCTTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: PSCKDASIQSRVLYS*TTCQLKSLWPMAWA Trigger: TGCCCAAGCCATAGGCCATAGGCTTTTCAATTGACAGGTGGTGCAGCTATACAATACACGAGATTGTATGGATGCATCTTTACAGGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR CCA 90 bp | ATTTACCTTGGCTCATGGTTTCAAAGGCTTTACTCCACAGTCACTTaGTCCTCAGATGAGGCTGAACATCATGACAGTGTATGTTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: IYLGSWFQRLYSTVT*SSDEAEHHDSVCWS Trigger: GCTCCAACATACACTGTCATGATGTTCAGCCTCATCTGAGGACCAAGTGACTGTGGAGTAAAGCCTTTGAAACCATGAGCCAAGGTAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
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| 3UTR-3UTR GCA 90 bp | TGCGTGTGTGCCTGGTGCCCATGGAAACCAGAACAGGGCCCAGATCCCTTAGAAGGCTTGGGCAGGAAATaGAGGTGGGACATCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: CVCAWCPWKPEQGPDPLEGLGRK*RWDIWE Trigger: CTCCCAGATGTCCCACCTGCATTTCCTGCCCAAGCC...TTCTAAGGGATCTGGGCCCTGTTCTGGTTTCCATGGGCACCAGGCACACACGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR CAA 90 bp | TTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTaGTTGTTGTTTGTGGCCTTCTCAGCCTTGAGCAGGCTGAACAGA | + |
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Preference number: 2 (lower is better) Translates to: LLLLLLLLLLLLLLL*LLFVAFSALSRLNR Trigger: TCTGTTCAGCCTGCTCAAGGCTGAGAAGGCCACAAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTGCCTATGTACATGTAAGGGCACTGCGTGTGTGCCTGGTGCCCATGGAACCAGCTTGCAGTGAATaGGTTTCTGCTCATTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: CFAYVHVRALRVCLVPMEPACSE*VSAHSS Trigger: GGAGGAATGAGCAGAAACTCATTCACTGCAAGCTGG...TTCCATGGGCACCAGGCACACACGCAGTGCCCTTACATGTACATAGGCAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | TGCGTGTGTGCCTGGTGCCCATGGAAACCAGAACAGGGCCCAGATCCCTTAGAAAATAAGCATGAAGCATaGTGCTGGATCCTAAGGATG | + |
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Preference number: 2 (lower is better) Translates to: CVCAWCPWKPEQGPDPLENKHEA*CWILRM Trigger: CATCCTTAGGATCCAGCATCATGCTTCATGCTTATT...TTCTAAGGGATCTGGGCCCTGTTCTGGTTTCCATGGGCACCAGGCACACACGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR GCA 90 bp | TGCGTGTGTGCCTGGTGCCCATGGAAACCAGAACAGGGCCCAGATCCCTTAGAATGTAAAAGAATAGACTaGCTGCTGACCTTGCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: CVCAWCPWKPEQGPDPLECKRID*LLTLLC Trigger: GCAAAGCAAGGTCAGCAGGCAGTCTATTCTTTTACA...TTCTAAGGGATCTGGGCCCTGTTCTGGTTTCCATGGGCACCAGGCACACACGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR GCA 90 bp | CATGGTTTCAAAGGCTTTACTCCACAGTCACTTGGTCCTCAGATGAGGCTGAACTGCGTGTGTGCCTGGTaGCCATGGAAACCAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: HGFKGFTPQSLGPQMRLNCVCAW*PWKPEQ Trigger: CTGTTCTGGTTTCCATGGGCACCAGGCACACACGCA...GTTCAGCCTCATCTGAGGACCAAGTGACTGTGGAGTAAAGCCTTTGAAACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
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| 3UTR-3UTR CCA 90 bp | CACAATGGAGCTTATTGTCCTTGGTGGAGTCACCTGCCTTGGTTGCCATGCACATCTGAGTCTTATTTCTaGGAGCATGGAGCTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: HNGAYCPWWSHLPWLPCTSESYF*EHGAGR Trigger: CCTCCCAGCTCCATGCTCCCAGAAATAAGACTCAGA...TGTGCATGGCAACCAAGGCAGGTGACTCCACCAAGGACAATAAGCTCCATTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGGTGGTAAGGCTCATGATCAGCTCTTTGGGGACTCGTGAAAAGTCTGTCGTCACCAGCTTGCAGTaGATGAGTTTCTGCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: SRVVRLMISSLGTREKSVVTSLQ*MSFCSF Trigger: GAATGAGCAGAAACTCATTCACTGCAAGCTGGTGAC...GACAGACTTTTCACGAGTCCCCAAAGAGCTGATCATGAGCCTTACCACCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGACCTTGCTTTGCAACATAATACAGCTGAAACAAAGGATGGGGTCTGTGTGCAGGTGGGACATCTaGGAGGCAGAAAGGACTCTG | + |
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Preference number: 2 (lower is better) Translates to: LLTLLCNIIQLKQRMGSVCRWDI*EAERTL Trigger: CAGAGTCCTTTCTGCCTCCCAGATGTCCCACCTGCA...CACAGACCCCATCCTTTGTTTCAGCTGTATTATGTTGCAAAGCAAGGTCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGGAGGAAGAACCAGTACATAACTTCAACATCTGCTTCTTGGGTGCTGGGGTTTCCACATGGCAGTaGGCCTTCCTCAATATTCTG | + |
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Preference number: 2 (lower is better) Translates to: SWEEEPVHNFNICFLGAGVSTWQ*AFLNIL Trigger: CAGAATATTGAGGAAGGCTCACTGCCATGTGGAAAC...CCCAGCACCCAAGAAGCAGATGTTGAAGTTATGTACTGGTTCTTCCTCCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | AGAACCTTGTCTTGGCTTCATTCTTCTCTCATCACCCCTGACCCCACCTCTTTTCCAGCTTGCAGTGAATaGGTTTCTGCTCATTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: RTLSWLHSSLITPDPTSFPACSE*VSAHSS Trigger: GGAGGAATGAGCAGAAACTCATTCACTGCAAGCTGG...AAAAGAGGTGGGGTCAGGGGTGATGAGAGAAGAATGAAGCCAAGACAAGGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGACCTTGCTTTGCAACATAATACAGCTGAAACAAAGGATGGGGTCTGTGCAAGCGTATGTGACATaGAGGAGACAGTGGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LLTLLCNIIQLKQRMGSVQAYVT*RRQWPE Trigger: CTCAGGCCACTGTCTCCTTCATGTCACATACGCTTG...CACAGACCCCATCCTTTGTTTCAGCTGTATTATGTTGCAAAGCAAGGTCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR GCA 90 bp | CACAATGGAGCTTATTGTCCTTGGTGGAGTCACCTGCCTTGGTTGCCATGCACACATAACTTCAACATCTaGTTCTTGGGTGCTGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: HNGAYCPWWSHLPWLPCTHNFNI*FLGAGS Trigger: ACTCCCAGCACCCAAGAAGCAGATGTTGAAGTTATG...TGTGCATGGCAACCAAGGCAGGTGACTCCACCAAGGACAATAAGCTCCATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR CCA 90 bp | AGAACCTTGTCTTGGCTTCATTCTTCTCTCATCACCCCTGACCCCACCTCTTTTTGGGAGAGAGCCAAATaGGAGATCAGCCTAAGGACT | + |
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Preference number: 2 (lower is better) Translates to: RTLSWLHSSLITPDPTSFWERAK*EISLRT Trigger: AGTCCTTAGGCTGATCTCCCATTTGGCTCTCTCCCA...AAAAGAGGTGGGGTCAGGGGTGATGAGAGAAGAATGAAGCCAAGACAAGGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGACCTTGCTTTGCAACATAATACAGCTGAAACAAAGGATGGGGTCTGTGCTCTTTGGGGACTCGTaGAAAGTCTGTCCAACTCGT | + |
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Preference number: 2 (lower is better) Translates to: LLTLLCNIIQLKQRMGSVLFGDS*KVCPTR Trigger: ACGAGTTGGACAGACTTTTCACGAGTCCCCAAAGAG...CACAGACCCCATCCTTTGTTTCAGCTGTATTATGTTGCAAAGCAAGGTCAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGGGAGAGAGCCAAATGGGAGATCAGCCTAAGGACTATGTGAAGCGACAGAGTGTGCATGGCTGCTaGTATTATGTGAATCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: TLGESQMGDQPKDYVKRQSVHGC*YYVNQF Trigger: GAACTGATTCACATAATAGCAGCAGCCATGCACACT...CTGTCGCTTCACATAGTCCTTAGGCTGATCTCCCATTTGGCTCTCTCCCAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR CCA 90 bp | CATGGTTTCAAAGGCTTTACTCCACAGTCACTTGGTCCTCAGATGAGGCTGAACTTATTTCTGGGAGCATaGAGCTGGGAGGAAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: HGFKGFTPQSLGPQMRLNLFLGA*SWEEEP Trigger: TGGTTCTTCCTCCCAGCTCCATGCTCCCAGAAATAA...GTTCAGCCTCATCTGAGGACCAAGTGACTGTGGAGTAAAGCCTTTGAAACCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
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| 3UTR CAA 90 bp | CCAGTGAGAGCTAAGATGTTGGGCTACTTGCTTTTGTTGTTGTTGTaGTTGTTGTTGTTGCTGTTGCTGTTGCTGTTGCTGCTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PVRAKMLGYLLLLLL*LLLLLLLLLLLLLL Trigger: CAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAACAACAACAACAACAACAACAAAAGCAAGTAGCCCAACATCTTAGCTCTCACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGAAGCACCTAGGCCCTATAGAACAAAGGAGAAAAGAGGACTGATGTGCCTGCACCAGCCAAGGACCTaGAAAGAGTTGAAATTAGAG | + |
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Preference number: 2 (lower is better) Translates to: CEAPRPYRTKEKRGLMCLHQPRT*KELKLE Trigger: CTCTAATTTCAACTCTTTTCAGGTCCTTGGCTGGTG...CAGGCACATCAGTCCTCTTTTCTCCTTTGTTCTATAGGGCCTAGGTGCTTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | AGAACCTTGTCTTGGCTTCATTCTTCTCTCATCACCCCTGACCCCACCTCTTTTGGCTCACATGATTCATaGATATGGTTTCCACATGGC | + |
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Preference number: 2 (lower is better) Translates to: RTLSWLHSSLITPDPTSFGSHDS*IWFPHG Trigger: GCCATGTGGAAACCATATTCATGAATCATGTGAGCC...AAAAGAGGTGGGGTCAGGGGTGATGAGAGAAGAATGAAGCCAAGACAAGGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGACCTTGCTTTGCAACATAATACAGCTGAAACAAAGGATGGGGTCTGTGGTCACCAGCTTGCAGTaGATGAGTTTCTGCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: LLTLLCNIIQLKQRMGSVVTSLQ*MSFCSF Trigger: GAATGAGCAGAAACTCATTCACTGCAAGCTGGTGAC...CACAGACCCCATCCTTTGTTTCAGCTGTATTATGTTGCAAAGCAAGGTCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR GCA 90 bp | TGTTTTGCCTATGTACATGTAAGGGCACTGCGTGTGTGCCTGGTGCCCATGGAACTGCTGACCTTGCTTTaGAACATAATACAGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: CFAYVHVRALRVCLVPMELLTLL*NIIQLK Trigger: TTTCAGCTGTATTATGTTGCAAAGCAAGGTCAGCAG...TTCCATGGGCACCAGGCACACACGCAGTGCCCTTACATGTACATAGGCAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
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| 3UTR CAA 90 bp | ATAAACGCAGTGCTGAATATTAAACTTGGAGCCTTGATCAGAACCTaGTCTTGGCTTCATTCTTCTCTCATCACCCCTGACCCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: INAVLNIKLGALIRT*SWLHSSLITPDPTS Trigger: AGAGGTGGGGTCAGGGGTGATGAGAGAAGAATGAAGCCAAGACAAGGTTCTGATCAAGGCTCCAAGTTTAATATTCAGCACTGCGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR CCA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCAGGCAGGAAATGCAGGTaGGACATCTGGGAGGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: NAESSLQTHIPVMFNTTSGRKCR*DIWEAE Trigger: TTCTGCCTCCCAGATGTCCCACCTGCATTTCCTGCC...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR CAA 90 bp | GGCTTGCCCTATATAAACGCAGTGCTGAATATTAAACTTGGAGCCTaGATCAGAACCTTGTCTTGGCTTCATTCTTCTCTCATCACCCCT | + |
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Preference number: 2 (lower is better) Translates to: GLPYINAVLNIKLGA*IRTLSWLHSSLITP Trigger: AGGGGTGATGAGAGAAGAATGAAGCCAAGACAAGGTTCTGATCAAGGCTCCAAGTTTAATATTCAGCACTGCGTTTATATAGGGCAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCAGAAATTCTCCAAAGTCCATGTCCCTTCCCTGAATTTGGCTCACATGATTAGTGTGCATGGCTGCTaGTATTATGTGAATCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: GQKFSKVHVPSLNLAHMISVHGC*YYVNQF Trigger: GAACTGATTCACATAATAGCAGCAGCCATGCACACT...AATCATGTGAGCCAAATTCAGGGAAGGGACATGGACTTTGGAGAATTTCTGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTTCTATATAGCCCTGCCTTCCTGTAAAGATGCATCCATACAATCTCGTGTAAGCCTGTGTTTCTCGTaGGAGGAAAGTACAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FFYIALPSCKDASIQSRVSLCFS*EESTAG Trigger: CCCTGCTGTACTTTCCTCCCACGAGAAACACAGGCT...TACACGAGATTGTATGGATGCATCTTTACAGGAAGGCAGGGCTATATAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR CCA 90 bp | CATGGTTTCAAAGGCTTTACTCCACAGTCACTTGGTCCTCAGATGAGGCTGAACATCAACTTTCCACTGTaGGATATTCATTCTTGGACC | + |
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Preference number: 2 (lower is better) Translates to: HGFKGFTPQSLGPQMRLNINFPL*DIHSWT Trigger: GGTCCAAGAATGAATATCCCACAGTGGAAAGTTGAT...GTTCAGCCTCATCTGAGGACCAAGTGACTGTGGAGTAAAGCCTTTGAAACCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
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| 3UTR CAA 90 bp | CTTTGCAACATAATACAGCTGAAACAAAGGATGGGGTCTGTGGGCTaGCCCTATATAAACGCAGTGCTGAATATTAAACTTGGAGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LCNIIQLKQRMGSVG*PYINAVLNIKLGAL Trigger: CAAGGCTCCAAGTTTAATATTCAGCACTGCGTTTATATAGGGCAAGCCCACAGACCCCATCCTTTGTTTCAGCTGTATTATGTTGCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCACTCTTTGGGGACTCGTaGAAAGTCTGTCCAACTCGT | + |
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Preference number: 2 (lower is better) Translates to: NAESSLQTHIPVMFNTTSLFGDS*KVCPTR Trigger: ACGAGTTGGACAGACTTTTCACGAGTCCCCAAAGAG...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR CCA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCATCTGAGTCTTATTTCTaGGAGCATGGAGCTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: NAESSLQTHIPVMFNTTSSESYF*EHGAGR Trigger: CCTCCCAGCTCCATGCTCCCAGAAATAAGACTCAGA...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCAGTTTCCACATGGCAGTaGGCCTTCCTCAATATTCTG | + |
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Preference number: 2 (lower is better) Translates to: NAESSLQTHIPVMFNTTSVSTWQ*AFLNIL Trigger: CAGAATATTGAGGAAGGCTCACTGCCATGTGGAAAC...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTGTAGAACAGAGTCCTATAGGTGAAGTTGCAAAATCCAAGTTTATGAACCAAGCGTATGTGACATaGAGGAGACAGTGGCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: FSVEQSPIGEVAKSKFMNQAYVT*RRQWPE Trigger: CTCAGGCCACTGTCTCCTTCATGTCACATACGCTTG...GTTCATAAACTTGGATTTTGCAACTTCACCTATAGGACTCTGTTCTACAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTCTATATAGCCCTGCCTTCCTGTAAAGATGCATCCATACAATCTCGTGTATCAACATCTGCTTCTTaGGTGCTGGGAGTAAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: FFYIALPSCKDASIQSRVSTSAS*VLGVKA Trigger: TGCCTTTACTCCCAGCACCCAAGAAGCAGATGTTGA...TACACGAGATTGTATGGATGCATCTTTACAGGAAGGCAGGGCTATATAGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTCTATATAGCCCTGCCTTCCTGTAAAGATGCATCCATACAATCTCGTGTACATAACTTCAACATCTaGTTCTTGGGTGCTGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: FFYIALPSCKDASIQSRVHNFNI*FLGAGS Trigger: ACTCCCAGCACCCAAGAAGCAGATGTTGAAGTTATG...TACACGAGATTGTATGGATGCATCTTTACAGGAAGGCAGGGCTATATAGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR GCA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCATGTAAAAGAATAGACTaGCTGCTGACCTTGCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: NAESSLQTHIPVMFNTTSCKRID*LLTLLC Trigger: GCAAAGCAAGGTCAGCAGGCAGTCTATTCTTTTACA...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTGTCATAGGGCAGCATTCTTCCAAGAACATTTCCTTTATTTTAGTAAAAGACCACCAGCCAAGGACCTaGAAAGAGTTGAAATTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SVIGQHSSKNISFILVKDHQPRT*KELKLE Trigger: CTCTAATTTCAACTCTTTTCAGGTCCTTGGCTGGTG...GTCTTTTACTAAAATAAAGGAAATGTTCTTGGAAGAATGCTGCCCTATGACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CCA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCAATCAGAACCTTGTCTTaGCTTCATTCTTCTCTCATC | + |
|
Preference number: 2 (lower is better) Translates to: NAESSLQTHIPVMFNTTSIRTLS*LHSSLI Trigger: GATGAGAGAAGAATGAAGCCAAGACAAGGTTCTGAT...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CCA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCAATCAACTTTCCACTGTaGGATATTCATTCTTGGACC | + |
|
Preference number: 2 (lower is better) Translates to: NAESSLQTHIPVMFNTTSINFPL*DIHSWT Trigger: GGTCCAAGAATGAATATCCCACAGTGGAAAGTTGAT...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCTGTAGAACAGAGTCCTATAGGTGAAGTTGCAAAATCCAAGTTTATGAACCGTGTATTGTATAGCTaGACCACCTGTCAATTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FSVEQSPIGEVAKSKFMNRVLYS*TTCQLK Trigger: TTTCAATTGACAGGTGGTGCAGCTATACAATACACG...GTTCATAAACTTGGATTTTGCAACTTCACCTATAGGACTCTGTTCTACAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR GCA 72 bp | TGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGTTGTTGTTGTTTGTGGCCTTCTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CCCCCCCCCCCC*CCCCCLWPSQP Trigger: AGGCTGAGAAGGCCACAAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR GCA 72 bp | TGTTTTGCCTATGTACATGTAAGGGCACTGCGTGTGTaGCTGGTGCCCATGGAAACCAGAACAGGGCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CFAYVHVRALRV*LVPMETRTGPR Trigger: TCTGGGCCCTGTTCTGGTTTCCATGGGCACCAGGCACACACGCAGTGCCCTTACATGTACATAGGCAAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
||
| 3UTR TCA 72 bp | GGCTTCAAGCCATCCCCACTTGTCACCAGCTTGCAGTaGATGAGTTTCTGCTCATTCCTCCTCTTAGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GFKPSPLVTSLQ*MSFCSFLLLGQ Trigger: CTGGCCTAAGAGGAGGAATGAGCAGAAACTCATTCACTGCAAGCTGGTGACAAGTGGGGATGGCTTGAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR GCA 72 bp | ATTGAAAAGCCTATGGCCTATGGCTTGGGCAGGAAATaGAGGTGGGACATCTGGGAGGCAGAAAGGACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IEKPMAYGLGRK*RWDIWEAERTL Trigger: CAGAGTCCTTTCTGCCTCCCAGATGTCCCACCTGCATTTCCTGCCCAAGCCATAGGCCATAGGCTTTTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCGTGTGTGCCTGGTGCCCATGGAAACCAGAACAGGGCCCAGATCCCTTAGAAGTCCCTTCCCTGAATTaGGCTCACATGATTCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: CVCAWCPWKPEQGPDPLEVPSLN*AHMIHE Trigger: TTCATGAATCATGTGAGCCAAATTCAGGGAAGGGAC...TTCTAAGGGATCTGGGCCCTGTTCTGGTTTCCATGGGCACCAGGCACACACGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGACCTTGCTTTGCAACATAATACAGCTGAAACAAAGGATGGGGTCTGTGCCTATGGCCTATGGCTaGGGCAGGAAATGCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLTLLCNIIQLKQRMGSVPMAYG*GRKCRW Trigger: CCACCTGCATTTCCTGCCCAAGCCATAGGCCATAGG...CACAGACCCCATCCTTTGTTTCAGCTGTATTATGTTGCAAAGCAAGGTCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR TCA 72 bp | GAGAGAGCCAAATGGGAGATCAGCCTAAGGACTATGTaGAGCGACAGACACGTGGTACCTGAGCACAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ERAKWEISLRTM*SDRHVVPEHRK Trigger: TTTCCTGTGCTCAGGTACCACGTGTCTGTCGCTTCACATAGTCCTTAGGCTGATCTCCCATTTGGCTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR TCA 72 bp | TGTTGCTACTGTTGTTTTCCCCAGGAAGACCATGGATaGCATCACCGGCAGTCATTTCATCCTCCTGCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: CCYCCFPQEDHG*HHRQSFHPPAS Trigger: CGAGGCAGGAGGATGAAATGACTGCCGGTGATGTCATCCATGGTCTTCCTGGGGAAAACAACAGTAGCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
||
| 3UTR GCA 72 bp | AAAAGAGGACTGATGTGCCTGGGAGACAATTCACAGTaGCCCGTTCCACCAGCCAAGGACCTGAAAAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KRGLMCLGDNSQ*PVPPAKDLKRV Trigger: AACTCTTTTCAGGTCCTTGGCTGGTGGAACGGGGCACTGTGAATTGTCTCCCAGGCACATCAGTCCTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR GCA 72 bp | AGGCCCTATAGAACAAAGGAGAAAAGAGGACTGATGTaGCTGGGAGACAATTCACAGTGCCCCGTTCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: RPYRTKEKRGLM*LGDNSQCPVPP Trigger: TGGTGGAACGGGGCACTGTGAATTGTCTCCCAGGCACATCAGTCCTCTTTTCTCCTTTGTTCTATAGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR GCA 72 bp | CTCAGCCTTGAGCAGGCTGAACAGACCTTGAACACTTaGCACAATGGAGCTTATTGTCCTTGGTGGAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LSLEQAEQTLNT*HNGAYCPWWSH Trigger: GTGACTCCACCAAGGACAATAAGCTCCATTGTGGCAAGTGTTCAAGGTCTGTTCAGCCTGCTCAAGGCTGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAACCTTGTCTTGGCTTCATTCTTCTCTCATCACCCCTGACCCCACCTCTTTTTCAAGCCATCCCCACTaGTCACCAGCTTGCAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RTLSWLHSSLITPDPTSFSSHPH*SPACSE Trigger: TTCACTGCAAGCTGGTGACAAGTGGGGATGGCTTGA...AAAAGAGGTGGGGTCAGGGGTGATGAGAGAAGAATGAAGCCAAGACAAGGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTTTCAAAGGCTTTACTCCACAGTCACTTGGTCCTCAGATGAGGCTGAACCTTCAAAGGCATGCCTaGGTGCCCACCTCCTCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: HGFKGFTPQSLGPQMRLNLQRHA*VPTSSN Trigger: ATTAGAGGAGGTGGGCACCAAGGCATGCCTTTGAAG...GTTCAGCCTCATCTGAGGACCAAGTGACTGTGGAGTAAAGCCTTTGAAACCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
||
| 3UTR TCA 72 bp | GGTGGTAAGGCTCATGATCAGCTCTTTGGGGACTCGTaGAAAGTCTGTCCAACTCGTTATAGTCAGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GGKAHDQLFGDS*KVCPTRYSQGA Trigger: TGCTCCCTGACTATAACGAGTTGGACAGACTTTTCACGAGTCCCCAAAGAGCTGATCATGAGCCTTACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR TCA 72 bp | AGAACAGGGCCCAGATCCCTTAGAACTGGACTGTTGTaGGCCACATGTGGGTGCTGGGAACTGAACATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RTGPRSLRTGLL*ATCGCWELNIN Trigger: ATTTATGTTCAGTTCCCAGCACCCACATGTGGCTCACAACAGTCCAGTTCTAAGGGATCTGGGCCCTGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CCA 72 bp | ATGAGTCTGTATAGGTCTGCAGGATCAGATTGCACTTaGCTTCAAGCCATCCCCACTTGTCACCAGCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: MSLYRSAGSDCT*LQAIPTCHQLA Trigger: TGCAAGCTGGTGACAAGTGGGGATGGCTTGAAGCCAAGTGCAATCTGATCCTGCAGACCTATACAGACTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CCA 72 bp | TTGTATAGCTGCACCACCTGTCAATTGAAAAGCCTATaGCCTATGGCTTGGGCAGGAAATGCAGGTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LYSCTTCQLKSL*PMAWAGNAGGT Trigger: TGTCCCACCTGCATTTCCTGCCCAAGCCATAGGCCATAGGCTTTTCAATTGACAGGTGGTGCAGCTATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CCA 72 bp | ACCTTGAACACTTGCCACAATGGAGCTTATTGTCCTTaGTGGAGTCACCTGCCTTGGTTGCCATGCACATTC | + |
|
Preference number: 3 (lower is better) Translates to: TLNTCHNGAYCP*WSHLPWLPCTF Trigger: GAATGTGCATGGCAACCAAGGCAGGTGACTCCACCAAGGACAATAAGCTCCATTGTGGCAAGTGTTCAAGGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGACCTTGCTTTGCAACATAATACAGCTGAAACAAAGGATGGGGTCTGTGAGGATCAGATTGCACTaGGCTTCAAGCCATCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLTLLCNIIQLKQRMGSVRIRLH*ASSHPH Trigger: GTGGGGATGGCTTGAAGCCAAGTGCAATCTGATCCT...CACAGACCCCATCCTTTGTTTCAGCTGTATTATGTTGCAAAGCAAGGTCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CAA 90 bp | CACAATGGAGCTTATTGTCCTTGGTGGAGTCACCTGCCTTGGTTGCCATGCACAGCCTTGATCAGAACCTaGTCTTGGCTTCATTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: HNGAYCPWWSHLPWLPCTALIRT*SWLHSS Trigger: AGAAGAATGAAGCCAAGACAAGGTTCTGATCAAGGC...TGTGCATGGCAACCAAGGCAGGTGACTCCACCAAGGACAATAAGCTCCATTGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CAA 90 bp | CACAATGGAGCTTATTGTCCTTGGTGGAGTCACCTGCCTTGGTTGCCATGCACACCTGCTGACCTTGCTTaGCAACATAATACAGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HNGAYCPWWSHLPWLPCTPADLA*QHNTAE Trigger: TTCAGCTGTATTATGTTGCAAAGCAAGGTCAGCAGG...TGTGCATGGCAACCAAGGCAGGTGACTCCACCAAGGACAATAAGCTCCATTGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR TCA 72 bp | ACAATTCACAGTGCCCCGTTCCACCAGCCAAGGACCTaGAAAGAGTTGAAATTAGAGGTAAATAGCTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TIHSAPFHQPRT*KELKLEVNSWG Trigger: CCCCCAGCTATTTACCTCTAATTTCAACTCTTTTCAGGTCCTTGGCTGGTGGAACGGGGCACTGTGAATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR GCA 72 bp | GCCACAATGGAGCTTATTGTCCTTGGTGGAGTCACCTaGCTTGGTTGCCATGCACATTCCTATAGGATTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ATMELIVLGGVT*LGCHAHSYRIV Trigger: TACAATCCTATAGGAATGTGCATGGCAACCAAGGCAGGTGACTCCACCAAGGACAATAAGCTCCATTGTGGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CCA 72 bp | TTGAACACTTGCCACAATGGAGCTTATTGTCCTTGGTaGAGTCACCTGCCTTGGTTGCCATGCACATTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LNTCHNGAYCPW*SHLPWLPCTFL Trigger: TAGGAATGTGCATGGCAACCAAGGCAGGTGACTCCACCAAGGACAATAAGCTCCATTGTGGCAAGTGTTCAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CCA 72 bp | TCCTCAGATGAGGCTGAACATCATGACAGTGTATGTTaGAGCAAAACTTCTCACCTTGGGGCAGCCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSDEAEHHDSVC*SKTSHLGAARK Trigger: CTTTCTGGCTGCCCCAAGGTGAGAAGTTTTGCTCCAACATACACTGTCATGATGTTCAGCCTCATCTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
||
| 3UTR CCA 72 bp | TTTCATGTTCAAAGTTTGTTTGAGCAGAGGCATTTCTaGGGGCCCAGGCCCCTTCATTCCACTCCTTCGATT | + |
|
Preference number: 3 (lower is better) Translates to: FHVQSLFEQRHF*GPRPLHSTPSI Trigger: AATCGAAGGAGTGGAATGAAGGGGCCTGGGCCCCCAGAAATGCCTCTGCTCAAACAAACTTTGAACATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
||
| 3UTR TCA 72 bp | CCATGTCCCTTCCCTGAATTTGGCTCACATGATTCATaGATATGGTTTCCACATGGCAGTGAGCCTTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PCPFPEFGSHDS*IWFPHGSEPSS Trigger: TGAGGAAGGCTCACTGCCATGTGGAAACCATATTCATGAATCATGTGAGCCAAATTCAGGGAAGGGACATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR GCA 72 bp | GCAGTCATTTCATCCTCCTGCCTCGGGCTATATATGTaGTCTAGTACTTGTTCAACTGGGGTATCAACTACC | + |
|
Preference number: 3 (lower is better) Translates to: AVISSSCLGLYM*SSTCSTGVSTT Trigger: GGTAGTTGATACCCCAGTTGAACAAGTACTAGAGCACATATATAGCCCGAGGCAGGAGGATGAAATGACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
||
| 3UTR CCA 72 bp | GGCTCATGGTTTCAAAGGCTTTACTCCACAGTCACTTaGTCCTCAGATGAGGCTGAACATCATGACAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GSWFQRLYSTVT*SSDEAEHHDSV Trigger: TACACTGTCATGATGTTCAGCCTCATCTGAGGACCAAGTGACTGTGGAGTAAAGCCTTTGAAACCATGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGACCTTGCTTTGCAACATAATACAGCTGAAACAAAGGATGGGGTCTGTGGTCCCTTCCCTGAATTaGGCTCACATGATTCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLTLLCNIIQLKQRMGSVVPSLN*AHMIHE Trigger: TTCATGAATCATGTGAGCCAAATTCAGGGAAGGGAC...CACAGACCCCATCCTTTGTTTCAGCTGTATTATGTTGCAAAGCAAGGTCAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR TCA 72 bp | AATCTCGTGTATTGTATAGCTGCACCACCTGTCAATTaGAAAGCCTATGGCCTATGGCTTGGGCAGGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: NLVYCIAAPPVN*KAYGLWLGQEM Trigger: CATTTCCTGCCCAAGCCATAGGCCATAGGCTTTTCAATTGACAGGTGGTGCAGCTATACAATACACGAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CAA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCATCAAGCCATCCCCACTaGTCACCAGCTTGCAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: NAESSLQTHIPVMFNTTSSSHPH*SPACSE Trigger: TTCACTGCAAGCTGGTGACAAGTGGGGATGGCTTGA...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCTGTAGAACAGAGTCCTATAGGTGAAGTTGCAAAATCCAAGTTTATGAACCCTATGGCCTATGGCTaGGGCAGGAAATGCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FSVEQSPIGEVAKSKFMNPMAYG*GRKCRW Trigger: CCACCTGCATTTCCTGCCCAAGCCATAGGCCATAGG...GTTCATAAACTTGGATTTTGCAACTTCACCTATAGGACTCTGTTCTACAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR TCA 72 bp | ACAGTATCCACCACCTTCCAGAAGTCTGATGAATTGTaGATTCAGACCTTTCACCATCCAGTTAGTTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TVSTTFQKSDEL*IQTFHHPVSFP Trigger: GGGGAAACTAACTGGATGGTGAAAGGTCTGAATTCACAATTCATCAGACTTCTGGAAGGTGGTGGATACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215117.3 |
||
| 3UTR-3UTR CAA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCACTGCTGCTGCTGTTGTaGTTGTTTGTGGCCTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NAESSLQTHIPVMFNTTSLLLLL*LFVAFS Trigger: TGAGAAGGCCACAAACAACAACAACAGCAGCAGCAG...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR TCA 72 bp | AAATCCTCTGCAAGAACAGCGAGTACTCTGAAATGCTaGATCATCTCTTCAGACCCACATTCCAGTGATGTT | + |
|
Preference number: 3 (lower is better) Translates to: KSSARTASTLKC*IISSDPHSSDV Trigger: AACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATTTCAGAGTACTCGCTGTTCTTGCAGAGGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR TCA 72 bp | CTGAACATAAATCCTCTGCAAGAACAGCGAGTACTCTaGAATGCTGAATCATCTCTTCAGACCCACATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LNINPLQEQRVL*NAESSLQTHIP Trigger: TGGAATGTGGGTCTGAAGAGATGATTCAGCATTTCAGAGTACTCGCTGTTCTTGCAGAGGATTTATGTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR GCA 72 bp | AAAGATGCATCCATACAATCTCGTGTATTGTATAGCTaGACCACCTGTCAATTGAAAAGCCTATGGCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: KDASIQSRVLYS*TTCQLKSLWPM Trigger: CATAGGCCATAGGCTTTTCAATTGACAGGTGGTGCAGCTATACAATACACGAGATTGTATGGATGCATCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR GCA 72 bp | GATTGTAAAAGAATAGACTGCCTGCTGACCTTGCTTTaGAACATAATACAGCTGAAACAAAGGATGGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: DCKRIDCLLTLL*NIIQLKQRMGS Trigger: AGACCCCATCCTTTGTTTCAGCTGTATTATGTTGCAAAGCAAGGTCAGCAGGCAGTCTATTCTTTTACAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR-3UTR CAA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCAATACAATCTCGTGTATaGTATAGCTGCACCACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: NAESSLQTHIPVMFNTTSIQSRV*YSCTTC Trigger: ACAGGTGGTGCAGCTATACAATACACGAGATTGTAT...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CCA 72 bp | ATTTGTAAATGTATTTTTGAGTCTGAGTCTTATTTCTaGGAGCATGGAGCTGGGAGGAAGAACCAGTACATA | + |
|
Preference number: 3 (lower is better) Translates to: ICKCIFESESYF*EHGAGRKNQYI Trigger: TATGTACTGGTTCTTCCTCCCAGCTCCATGCTCCCAGAAATAAGACTCAGACTCAAAAATACATTTACAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CAA 72 bp | CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTaGTTGTTGTTTGTGGCCTTCTCAGCCTTGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLLLLL*LLFVAFSALSR Trigger: CCTGCTCAAGGCTGAGAAGGCCACAAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR TCA 90 bp | TGCGTGTGTGCCTGGTGCCCATGGAAACCAGAACAGGGCCCAGATCCCTTAGAAGGGGGTATGGAGGTGTaGGTCCAAGCAGATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVCAWCPWKPEQGPDPLEGGMEV*VQADED Trigger: ATCCTCATCTGCTTGGACTCACACCTCCATACCCCC...TTCTAAGGGATCTGGGCCCTGTTCTGGTTTCCATGGGCACCAGGCACACACGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | TGCGTGTGTGCCTGGTGCCCATGGAAACCAGAACAGGGCCCAGATCCCTTAGAATCTGGGGCACAGTTGTaGTGGTGTAGCCTAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVCAWCPWKPEQGPDPLESGAQL*WCSLSP Trigger: TGGACTTAGGCTACACCACCACAACTGTGCCCCAGA...TTCTAAGGGATCTGGGCCCTGTTCTGGTTTCCATGGGCACCAGGCACACACGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | CACAATGGAGCTTATTGTCCTTGGTGGAGTCACCTGCCTTGGTTGCCATGCACAGGCGCATGGCAAAGATaGTATAGACAAGAGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HNGAYCPWWSHLPWLPCTGAWQR*YRQEQR Trigger: CCGCTGCTCTTGTCTATACCATCTTTGCCATGCGCC...TGTGCATGGCAACCAAGGCAGGTGACTCCACCAAGGACAATAAGCTCCATTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR TCA 90 bp | ACTCTGGGAGAGAGCCAAATGGGAGATCAGCCTAAGGACTATGTGAAGCGACAGCACAGCCTGTTACCTTaGGGAAAGCCCTCTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TLGESQMGDQPKDYVKRQHSLLP*GKPSSH Trigger: ATGTGAAGAGGGCTTTCCTCAAGGTAACAGGCTGTG...CTGTCGCTTCACATAGTCCTTAGGCTGATCTCCCATTTGGCTCTCTCCCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGTGGTAAGGCTCATGATCAGCTCTTTGGGGACTCGTGAAAAGTCTGTCCACAGCCTGTTACCTTaGGGAAAGCCCTCTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SRVVRLMISSLGTREKSVHSLLP*GKPSSH Trigger: ATGTGAAGAGGGCTTTCCTCAAGGTAACAGGCTGTG...GACAGACTTTTCACGAGTCCCCAAAGAGCTGATCATGAGCCTTACCACCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | GTGGTAAGGCTCATGATCAGCTCTTTGGGGACTCGTGAAAAGTCTGTCCAACTCGGGGCACAGTTGTGGTaGTGTAGCCTAAGTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VVRLMISSLGTREKSVQLGAQLW*CSLSPT Trigger: TGTTGGACTTAGGCTACACCACCACAACTGTGCCCC...GAGTTGGACAGACTTTTCACGAGTCCCCAAAGAGCTGATCATGAGCCTTACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | CACAATGGAGCTTATTGTCCTTGGTGGAGTCACCTGCCTTGGTTGCCATGCACAGTACATGACCATGGCTaGCACACAGAACATGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HNGAYCPWWSHLPWLPCTVHDHG*HTEHGD Trigger: GTCACCATGTTCTGTGTGCCAGCCATGGTCATGTAC...TGTGCATGGCAACCAAGGCAGGTGACTCCACCAAGGACAATAAGCTCCATTGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGGAGAGAGCCAAATGGGAGATCAGCCTAAGGACTATGTGAAGCGACAGGTACATGACCATGGCTaGCACACAGAACATGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLGESQMGDQPKDYVKRQVHDHG*HTEHGD Trigger: GTCACCATGTTCTGTGTGCCAGCCATGGTCATGTAC...CTGTCGCTTCACATAGTCCTTAGGCTGATCTCCCATTTGGCTCTCTCCCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGGAGAGAGCCAAATGGGAGATCAGCCTAAGGACTATGTGAAGCGACAGCTTCTTGTCCTCTTCTaGGGAGGCTTTAGAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLGESQMGDQPKDYVKRQLLVLF*GGFRTR Trigger: CCTGGTTCTAAAGCCTCCCCAGAAGAGGACAAGAAG...CTGTCGCTTCACATAGTCCTTAGGCTGATCTCCCATTTGGCTCTCTCCCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAAGCACCTAGGCCCTATAGAACAAAGGAGAAAAGAGGACTGATGTGCCTGGGGGCACAGTTGTGGTaGTGTAGCCTAAGTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: CEAPRPYRTKEKRGLMCLGAQLW*CSLSPT Trigger: TGTTGGACTTAGGCTACACCACCACAACTGTGCCCC...CAGGCACATCAGTCCTCTTTTCTCCTTTGTTCTATAGGGCCTAGGTGCTTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | AGAACCTTGTCTTGGCTTCATTCTTCTCTCATCACCCCTGACCCCACCTCTTTTAGATGTGCCAACATCTaGGGCACAGTTGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLSWLHSSLITPDPTSFRCANI*GTVVVV Trigger: CACCACCACAACTGTGCCCCAGATGTTGGCACATCT...AAAAGAGGTGGGGTCAGGGGTGATGAGAGAAGAATGAAGCCAAGACAAGGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CAA 72 bp | GACCTTGAACACTTGCCACAATGGAGCTTATTGTCCTaGGTGGAGTCACCTGCCTTGGTTGCCATGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: DLEHLPQWSLLS*VESPALVAMHI Trigger: AATGTGCATGGCAACCAAGGCAGGTGACTCCACCAAGGACAATAAGCTCCATTGTGGCAAGTGTTCAAGGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | GGCCAGAAATTCTCCAAAGTCCATGTCCCTTCCCTGAATTTGGCTCACATGATTGGCGCATGGCAAAGATaGTATAGACAAGAGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GQKFSKVHVPSLNLAHMIGAWQR*YRQEQR Trigger: CCGCTGCTCTTGTCTATACCATCTTTGCCATGCGCC...AATCATGTGAGCCAAATTCAGGGAAGGGACATGGACTTTGGAGAATTTCTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR TCA 90 bp | GTGGTAAGGCTCATGATCAGCTCTTTGGGGACTCGTGAAAAGTCTGTCCAACTCACCTGTCTATGGACATaGTGGCAAAAAGCCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VVRLMISSLGTREKSVQLTCLWT*WQKAKT Trigger: AGTCTTGGCTTTTTGCCATCATGTCCATAGACAGGT...GAGTTGGACAGACTTTTCACGAGTCCCCAAAGAGCTGATCATGAGCCTTACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | GGCCAGAAATTCTCCAAAGTCCATGTCCCTTCCCTGAATTTGGCTCACATGATTCTTCTTGTCCTCTTCTaGGGAGGCTTTAGAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQKFSKVHVPSLNLAHMILLVLF*GGFRTR Trigger: CCTGGTTCTAAAGCCTCCCCAGAAGAGGACAAGAAG...AATCATGTGAGCCAAATTCAGGGAAGGGACATGGACTTTGGAGAATTTCTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR TCA 90 bp | AGAACCTTGTCTTGGCTTCATTCTTCTCTCATCACCCCTGACCCCACCTCTTTTAATTATCAGAAAGGCTaGGAAGAGAAGAGGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLSWLHSSLITPDPTSFNYQKG*EEKRCG Trigger: ACCACACCTCTTCTCTTCTCAGCCTTTCTGATAATT...AAAAGAGGTGGGGTCAGGGGTGATGAGAGAAGAATGAAGCCAAGACAAGGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR TCA 90 bp | ACTCTGGGAGAGAGCCAAATGGGAGATCAGCCTAAGGACTATGTGAAGCGACAGAGCCATTGCCCAGAATaGTCAACAAGTAAATTATCA | + |
|
Preference number: 4 (lower is better) Translates to: TLGESQMGDQPKDYVKRQSHCPE*STSKLS Trigger: TGATAATTTACTTGTTGATCATTCTGGGCAATGGCT...CTGTCGCTTCACATAGTCCTTAGGCTGATCTCCCATTTGGCTCTCTCCCAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR TCA 90 bp | CTGCTGACCTTGCTTTGCAACATAATACAGCTGAAACAAAGGATGGGGTCTGTGACCTGTCTATGGACATaGTGGCAAAAAGCCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLTLLCNIIQLKQRMGSVTCLWT*WQKAKT Trigger: AGTCTTGGCTTTTTGCCATCATGTCCATAGACAGGT...CACAGACCCCATCCTTTGTTTCAGCTGTATTATGTTGCAAAGCAAGGTCAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CAA 72 bp | GTGCTGAATATTAAACTTGGAGCCTTGATCAGAACCTaGTCTTGGCTTCATTCTTCTCTCATCACCCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLNIKLGALIRT*SWLHSSLITPD Trigger: GTCAGGGGTGATGAGAGAAGAATGAAGCCAAGACAAGGTTCTGATCAAGGCTCCAAGTTTAATATTCAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAAGCACCTAGGCCCTATAGAACAAAGGAGAAAAGAGGACTGATGTGCCTGTTTGAGCCACACAATTaGAGTAAGAGATTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CEAPRPYRTKEKRGLMCLFEPHN*SKRLSS Trigger: AGAAGACAATCTCTTACTCCAATTGTGTGGCTCAAA...CAGGCACATCAGTCCTCTTTTCTCCTTTGTTCTATAGGGCCTAGGTGCTTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | TCTGTCATAGGGCAGCATTCTTCCAAGAACATTTCCTTTATTTTAGTAAAAGACTCTGGGGCACAGTTGTaGTGGTGTAGCCTAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVIGQHSSKNISFILVKDSGAQL*WCSLSP Trigger: TGGACTTAGGCTACACCACCACAACTGTGCCCCAGA...GTCTTTTACTAAAATAAAGGAAATGTTCTTGGAAGAATGCTGCCCTATGACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CAA 72 bp | CAGAAATTCTCCAAAGTCCATGTCCCTTCCCTGAATTaGGCTCACATGATTCATGAATATGGTTTCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: QKFSKVHVPSLN*AHMIHEYGFHM Trigger: CATGTGGAAACCATATTCATGAATCATGTGAGCCAAATTCAGGGAAGGGACATGGACTTTGGAGAATTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CAA 72 bp | CCTTCCTGTAAAGATGCATCCATACAATCTCGTGTATaGTATAGCTGCACCACCTGTCAATTGAAAAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PSCKDASIQSRV*YSCTTCQLKSL Trigger: TAGGCTTTTCAATTGACAGGTGGTGCAGCTATACAATACACGAGATTGTATGGATGCATCTTTACAGGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CAA 72 bp | ATAATACAGCTGAAACAAAGGATGGGGTCTGTGGGCTaGCCCTATATAAACGCAGTGCTGAATATTAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: IIQLKQRMGSVG*PYINAVLNIKL Trigger: AAGTTTAATATTCAGCACTGCGTTTATATAGGGCAAGCCCACAGACCCCATCCTTTGTTTCAGCTGTATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| 3UTR CAA 72 bp | TATATAAACGCAGTGCTGAATATTAAACTTGGAGCCTaGATCAGAACCTTGTCTTGGCTTCATTCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YINAVLNIKLGA*IRTLSWLHSSL Trigger: GAGAGAAGAATGAAGCCAAGACAAGGTTCTGATCAAGGCTCCAAGTTTAATATTCAGCACTGCGTTTATATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR TCA 90 bp | TCTGTCATAGGGCAGCATTCTTCCAAGAACATTTCCTTTATTTTAGTAAAAGACAATTATCAGAAAGGCTaGGAAGAGAAGAGGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVIGQHSSKNISFILVKDNYQKG*EEKRCG Trigger: ACCACACCTCTTCTCTTCTCAGCCTTTCTGATAATT...GTCTTTTACTAAAATAAAGGAAATGTTCTTGGAAGAATGCTGCCCTATGACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR TCA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCAAGCCATTGCCCAGAATaGTCAACAAGTAAATTATCA | + |
|
Preference number: 4 (lower is better) Translates to: NAESSLQTHIPVMFNTTSSHCPE*STSKLS Trigger: TGATAATTTACTTGTTGATCATTCTGGGCAATGGCT...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CCA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCATTTGAGCCACACAATTaGAGTAAGAGATTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NAESSLQTHIPVMFNTTSFEPHN*SKRLSS Trigger: AGAAGACAATCTCTTACTCCAATTGTGTGGCTCAAA...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CAA 90 bp | ACTCTGGGAGAGAGCCAAATGGGAGATCAGCCTAAGGACTATGTGAAGCGACAGAATTGGAGTAAGAGATaGTCTTCTTCTGGCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TLGESQMGDQPKDYVKRQNWSKR*SSSGWP Trigger: TGGCCAGCCAGAAGAAGACAATCTCTTACTCCAATT...CTGTCGCTTCACATAGTCCTTAGGCTGATCTCCCATTTGGCTCTCTCCCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CAA 90 bp | CACAATGGAGCTTATTGTCCTTGGTGGAGTCACCTGCCTTGGTTGCCATGCACAATGAAGATCAAGCCATaGCCCAGAATGATCAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: HNGAYCPWWSHLPWLPCTMKIKP*PRMINK Trigger: CTTGTTGATCATTCTGGGCAATGGCTTGATCTTCAT...TGTGCATGGCAACCAAGGCAGGTGACTCCACCAAGGACAATAAGCTCCATTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS CCA 90 bp | GACAGGGGGATCAGTATGACACTAAACCCAAGTATGAAGTCCACATaGTCATTGACTGATGTATCTGCACAAGCCAGCTTTAAGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DRGISMTLNPSMKST*SLTDVSAQASFKTA Trigger: TGCAGTCTTAAAGCTGGCTTGTGCAGATACATCAGTCAATGACCATGTGGACTTCATACTTGGGTTTAGTGTCATACTGATCCCCCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061215.6 ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CAA 90 bp | TGTGAAGCACCTAGGCCCTATAGAACAAAGGAGAAAAGAGGACTGATGTGCCTGATGAAGATCAAGCCATaGCCCAGAATGATCAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: CEAPRPYRTKEKRGLMCLMKIKP*PRMINK Trigger: CTTGTTGATCATTCTGGGCAATGGCTTGATCTTCAT...CAGGCACATCAGTCCTCTTTTCTCCTTTGTTCTATAGGGCCTAGGTGCTTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CAA 90 bp | AATGCTGAATCATCTCTTCAGACCCACATTCCAGTGATGTTTAATACTACCTCACCACAGCCTGTTACCTaGAGGAAAGCCCTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: NAESSLQTHIPVMFNTTSPQPVT*RKALFT Trigger: TGTGAAGAGGGCTTTCCTCAAGGTAACAGGCTGTGG...TGAGGTAGTATTAAACATCACTGGAATGTGGGTCTGAAGAGATGATTCAGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS-3UTR CAA 90 bp | TTTTCTGTAGAACAGAGTCCTATAGGTGAAGTTGCAAAATCCAAGTTTATGAACAATTGGAGTAAGAGATaGTCTTCTTCTGGCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSVEQSPIGEVAKSKFMNNWSKR*SSSGWP Trigger: TGGCCAGCCAGAAGAAGACAATCTCTTACTCCAATT...GTTCATAAACTTGGATTTTGCAACTTCACCTATAGGACTCTGTTCTACAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS CAA 90 bp | GGGATCAGTATGACACTAAACCCAAGTATGAAGTCCACATGGTCATaGACTGATGTATCTGCACAAGCCAGCTTTAAGACTGCAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: GISMTLNPSMKSTWS*TDVSAQASFKTAGT Trigger: AGTCCCTGCAGTCTTAAAGCTGGCTTGTGCAGATACATCAGTCAATGACCATGTGGACTTCATACTTGGGTTTAGTGTCATACTGATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061215.6 ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS CCA 72 bp | ATCAGTATGACACTAAACCCAAGTATGAAGTCCACATaGTCATTGACTGATGTATCTGCACAAGCCAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ISMTLNPSMKST*SLTDVSAQASF Trigger: AAAGCTGGCTTGTGCAGATACATCAGTCAATGACCATGTGGACTTCATACTTGGGTTTAGTGTCATACTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061215.6 ENSMUST00000214131.2 ENSMUST00000215117.3 |
||
| CDS CAA 72 bp | ATGACACTAAACCCAAGTATGAAGTCCACATGGTCATaGACTGATGTATCTGCACAAGCCAGCTTTAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: MTLNPSMKSTWS*TDVSAQASFKT Trigger: AGTCTTAAAGCTGGCTTGTGCAGATACATCAGTCAATGACCATGTGGACTTCATACTTGGGTTTAGTGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061215.6 ENSMUST00000214131.2 ENSMUST00000215117.3 |
||