Pregenerated sensors for OLFR1340 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070821Ensembl transcript IDs: ENSMUST00000094834.6, ENSMUST00000213436.3, ENSMUST00000216242.3, ENSMUST00000217334.3
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTAGACCAGGCTTGCCCTCAAATTCATGGAGCTCTACCTTCCTCTaGCTCCCGAGTGCTGGGACCAAAGGTGTGTGCTGCCACCACCAG | + |
|
Preference number: 1 (lower is better) Translates to: CRPGLPSNSWSSTFL*LPSAGTKGVCCHHQ Trigger: CTGGTGGTGGCAGCACACACCTTTGGTCCCAGCACTCGGGAGGCAGAGGAAGGTAGAGCTCCATGAATTTGAGGGCAAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR TCA 90 bp | ATTCACTCAGGATACAGAATGTCACAGTGTAAGGGCTGGAAGGGCTaGCTTCTCAACAGAGCTCCAGACTCCAGGGATCTGGCCCTGCAC | + |
|
Preference number: 1 (lower is better) Translates to: IHSGYRMSQCKGWKG*LLNRAPDSRDLALH Trigger: GTGCAGGGCCAGATCCCTGGAGTCTGGAGCTCTGTTGAGAAGTCAGCCCTTCCAGCCCTTACACTGTGACATTCTGTATCCTGAGTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR TCA 90 bp | TCCCTCATCCTGAGAATCCTCTCTCATTCGATCCAAGAACCTCAGTaGAATTGTGGGTGGCACACCCAAGAGGCCCGAAGTATTGCAGAC | + |
|
Preference number: 1 (lower is better) Translates to: SLILRILSHSIQEPQ*NCGWHTQEARSIAD Trigger: GTCTGCAATACTTCGGGCCTCTTGGGTGTGCCACCCACAATTTCACTGAGGTTCTTGGATCGAATGAGAGAGGATTCTCAGGATGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR CCA 90 bp | GAAACACCAGAAATGGTTTATTTCCTGATGTGGCAACTGATGTTGTaGGTATGTCCCTCCCCAACCCCCAACTCTTTCTCTGCTGAAAGT | + |
|
Preference number: 1 (lower is better) Translates to: ETPEMVYFLMWQLML*VCPSPTPNSFSAES Trigger: ACTTTCAGCAGAGAAAGAGTTGGGGGTTGGGGAGGGACATACCCACAACATCAGTTGCCACATCAGGAAATAAACCATTTCTGGTGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR TCA 90 bp | ATTGAACCTCGGTCCTCTGCAAGAACAGCCAGTGTTCTAAACCACTaGGTCATCTGTCCAGCCCTTGATAGAAATTTGACTTGGTTTGAA | + |
|
Preference number: 1 (lower is better) Translates to: IEPRSSARTASVLNH*VICPALDRNLTWFE Trigger: TTCAAACCAAGTCAAATTTCTATCAAGGGCTGGACAGATGACTCAGTGGTTTAGAACACTGGCTGTTCTTGCAGAGGACCGAGGTTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR TCA 90 bp | ATTGAGTTACAAATGGTCATGAGTCACCATGTGAGTACTGAGAATTaGACCTCGGTCCTCTGCAAGAACAGCCAGTGTTCTAAACCACTG | + |
|
Preference number: 1 (lower is better) Translates to: IELQMVMSHHVSTEN*TSVLCKNSQCSKPL Trigger: CAGTGGTTTAGAACACTGGCTGTTCTTGCAGAGGACCGAGGTTCAATTCTCAGTACTCACATGGTGACTCATGACCATTTGTAACTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR CCA 90 bp | AATTTGACTTGGTTTGAAACACCAGAAATGGTTTATTTCCTGATGTaGCAACTGATGTTGTGGGTATGTCCCTCCCCAACCCCCAACTCT | + |
|
Preference number: 1 (lower is better) Translates to: NLTWFETPEMVYFLM*QLMLWVCPSPTPNS Trigger: AGAGTTGGGGGTTGGGGAGGGACATACCCACAACATCAGTTGCCACATCAGGAAATAAACCATTTCTGGTGTTTCAAACCAAGTCAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR CCA 90 bp | CAATTCTTTGAGTCCTTTCCCGGTGTATCCATTAGTAAATTCATGTaGAACATTCTTTTCTTGTGTCTCCCTCATCCTGAGAATCCTCTC | + |
|
Preference number: 1 (lower is better) Translates to: QFFESFPGVSISKFM*NILFLCLPHPENPL Trigger: GAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAATGTTCCACATGAATTTACTAATGGATACACCGGGAAAGGACTCAAAGAATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR CCA 90 bp | TCTCATTTGAGGTTTAAAACAATTTATAGTACGGACAATAGAACATaGTTATCACCTCCATTTGAGTTCAAAGAGGACTGGATTCTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: SHLRFKTIYSTDNRT*LSPPFEFKEDWILE Trigger: CTCCAGAATCCAGTCCTCTTTGAACTCAAATGGAGGTGATAACCATGTTCTATTGTCCGTACTATAAATTGTTTTAAACCTCAAATGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAACTGGAACAGACTCAACCGCAATAGGAGAGGAGCCCATGACAGCGAAGATCAAGGGCTGGAAGGGCTaGCTTCTCAACAGAGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: TTGTDSTAIGEEPMTAKIKGWKG*LLNRAP Trigger: TGGAGCTCTGTTGAGAAGTCAGCCCTTCCAGCCCTT...GATCTTCGCTGTCATGGGCTCCTCTCCTATTGCGGTTGAGTCTGTTCCAGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR-3UTR CCA 90 bp | GATCTGAGAGCAGAGCTGACCAACTCAGCTAGGAAGGAACTCTCCCACCAAACCACCTCAGTGAAATTGTaGGTGGCACACCCAAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: DLRAELTNSARKELSHQTTSVKL*VAHPRG Trigger: GCCTCTTGGGTGTGCCACCCACAATTTCACTGAGGT...GGTTTGGTGGGAGAGTTCCTTCCTAGCTGAGTTGGTCAGCTCTGCTCTCAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR CAA 90 bp | CATCCTGAGAATCCTCTCTCATTCGATCCAAGAACCTCAGTGAAATaGTGGGTGGCACACCCAAGAGGCCCGAAGTATTGCAGACAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: HPENPLSFDPRTSVK*WVAHPRGPKYCRQP Trigger: AGGCTGTCTGCAATACTTCGGGCCTCTTGGGTGTGCCACCCACAATTTCACTGAGGTTCTTGGATCGAATGAGAGAGGATTCTCAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAACTGGAACAGACTCAACCGCAATAGGAGAGGAGCCCATGACAGCGAAGATCTTGCCCTCAAATTCATaGAGCTCTACCTTCCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: TTGTDSTAIGEEPMTAKILPSNS*SSTFLC Trigger: GCAGAGGAAGGTAGAGCTCCATGAATTTGAGGGCAA...GATCTTCGCTGTCATGGGCTCCTCTCCTATTGCGGTTGAGTCTGTTCCAGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCAAGATCAAAGCCCAGGGTACTTCCCACTGTCTCATGTCTCTCTGGCATCCCACCAAACCTGTATTaGGACTTTGTTTTGGACTAC | + |
|
Preference number: 2 (lower is better) Translates to: KPRSKPRVLPTVSCLSGIPPNLY*DFVLDY Trigger: GTAGTCCAAAACAAAGTCTCAATACAGGTTTGGTGG...GATGCCAGAGAGACATGAGACAGTGGGAAGTACCCTGGGCTTTGATCTTGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGAACATTCTTTTCTTGTGTCTCCCTCATCCTGAGAATCCTCTCTCATTCGATACCTCAGTGAAATTGTaGGTGGCACACCCAAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: WNILFLCLPHPENPLSFDTSVKL*VAHPRG Trigger: GCCTCTTGGGTGTGCCACCCACAATTTCACTGAGGT...ATCGAATGAGAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAATGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR CAA 90 bp | TTTGAAACACCAGAAATGGTTTATTTCCTGATGTGGCAACTGATGTaGTGGGTATGTCCCTCCCCAACCCCCAACTCTTTCTCTGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: FETPEMVYFLMWQLM*WVCPSPTPNSFSAE Trigger: TTCAGCAGAGAAAGAGTTGGGGGTTGGGGAGGGACATACCCACAACATCAGTTGCCACATCAGGAAATAAACCATTTCTGGTGTTTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGCACAATTCTTTGAGTCCTTTCCCGGTGTATCCATTAGTAAATTCATGTGGAGTGTCTCCCTCATCCTaGGAATCCTCTCTCATTCGA | + |
|
Preference number: 2 (lower is better) Translates to: GHNSLSPFPVYPLVNSCGVSPSS*ESSLIR Trigger: TCGAATGAGAGAGGATTCTCAGGATGAGGGAGACAC...TCCACATGAATTTACTAATGGATACACCGGGAAAGGACTCAAAGAATTGTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR-3UTR TCA 90 bp | AACCAGTCAAGGCAATATAGTGACACACACACACCTCAAGGTGAAGAGGAGGAGTGCTGCAAACCAATGTaGCCTTTCCAAAACCATAGA | + |
|
Preference number: 2 (lower is better) Translates to: NQSRQYSDTHTPQGEEEECCKPM*PFQNHR Trigger: TCTATGGTTTTGGAAAGGTCACATTGGTTTGCAGCA...CTCCTCCTCTTCACCTTGAGGTGTGTGTGTGTCACTATATTGCCTTGACTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR-3UTR CCA 90 bp | CTAATTCTTGGGCACAATTCTTTGAGTCCTTTCCCGGTGTATCCATTAGTAAATACCTCAGTGAAATTGTaGGTGGCACACCCAAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LILGHNSLSPFPVYPLVNTSVKL*VAHPRG Trigger: GCCTCTTGGGTGTGCCACCCACAATTTCACTGAGGT...ATTTACTAATGGATACACCGGGAAAGGACTCAAAGAATTGTGCCCAAGAATTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR CAA 90 bp | TTTCCCGGTGTATCCATTAGTAAATTCATGTGGAACATTCTTTTCTaGTGTCTCCCTCATCCTGAGAATCCTCTCTCATTCGATCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: FPGVSISKFMWNILF*CLPHPENPLSFDPR Trigger: TCTTGGATCGAATGAGAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAATGTTCCACATGAATTTACTAATGGATACACCGGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAAGGCCACTTAAATTATTGAGTGACTGTTATACAAAGGCCACCTTAGTTGTGTCTCCCTCATCCTaGGAATCCTCTCTCATTCGA | + |
|
Preference number: 2 (lower is better) Translates to: KRRPLKLLSDCYTKATLVVSPSS*ESSLIR Trigger: TCGAATGAGAGAGGATTCTCAGGATGAGGGAGACAC...AACTAAGGTGGCCTTTGTATAACAGTCACTCAATAATTTAAGTGGCCTTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR-3UTR TCA 90 bp | AACAACACACACACAACCATAAAACTTCCAAACTGGTTAAAAATACCTGGGATGTCACCATGTGAGTACTaGGAATTGAACCTCGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NNTHTTIKLPNWLKIPGMSPCEY*ELNLGP Trigger: AGGACCGAGGTTCAATTCTCAGTACTCACATGGTGA...CATCCCAGGTATTTTTAACCAGTTTGGAAGTTTTATGGTTGTGTGTGTGTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR-3UTR TCA 90 bp | AACAACACACACACAACCATAAAACTTCCAAACTGGTTAAAAATACCTGGGATGCAAAACCATAGAAATTaGGTGACACGGCTAATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: NNTHTTIKLPNWLKIPGMQNHRN*VTRLIL Trigger: AAGAATTAGCCGTGTCACTCAATTTCTATGGTTTTG...CATCCCAGGTATTTTTAACCAGTTTGGAAGTTTTATGGTTGTGTGTGTGTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAAGGCCACTTAAATTATTGAGTGACTGTTATACAAAGGCCACCTTAGTTCAAAACCATAGAAATTaGGTGACACGGCTAATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: KRRPLKLLSDCYTKATLVQNHRN*VTRLIL Trigger: AAGAATTAGCCGTGTCACTCAATTTCTATGGTTTTG...AACTAAGGTGGCCTTTGTATAACAGTCACTCAATAATTTAAGTGGCCTTCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR CCA 72 bp | TTCATGGAGCTCTACCTTCCTCTGCCTCCCGAGTGCTaGGACCAAAGGTGTGTGCTGCCACCACCAGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: FMELYLPLPPEC*DQRCVLPPPAR Trigger: CCTAGCTGGTGGTGGCAGCACACACCTTTGGTCCCAGCACTCGGGAGGCAGAGGAAGGTAGAGCTCCATGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR GCA 72 bp | CTCTGCCTCCCGAGTGCTGGGACCAAAGGTGTGTGCTaGCACCACCAGCTAGGGTTCTTTTTAGCCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LCLPSAGTKGVC*HHQLGFFLAFL Trigger: GAGGAAGGCTAAAAAGAACCCTAGCTGGTGGTGGCAGCACACACCTTTGGTCCCAGCACTCGGGAGGCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR GCA 72 bp | GGCTTGCCCTCAAATTCATGGAGCTCTACCTTCCTCTaGCTCCCGAGTGCTGGGACCAAAGGTGTGTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GLPSNSWSSTFL*LPSAGTKGVCC Trigger: GCAGCACACACCTTTGGTCCCAGCACTCGGGAGGCAGAGGAAGGTAGAGCTCCATGAATTTGAGGGCAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR GCA 72 bp | AAATTCATGGAGCTCTACCTTCCTCTGCCTCCCGAGTaGTGGGACCAAAGGTGTGTGCTGCCACCACCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KFMELYLPLPPE*WDQRCVLPPPA Trigger: AGCTGGTGGTGGCAGCACACACCTTTGGTCCCAGCACTCGGGAGGCAGAGGAAGGTAGAGCTCCATGAATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCAAGATCAAAGCCCAGGGTACTTCCCACTGTCTCATGTCTCTCTGGCATCATCAGAGCCTGGGCCTaGGAACTAAGCCCTGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KPRSKPRVLPTVSCLSGIIRAWA*ELSPGL Trigger: AAGCCCAGGGCTTAGTTCCAAGGCCCAGGCTCTGAT...GATGCCAGAGAGACATGAGACAGTGGGAAGTACCCTGGGCTTTGATCTTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCTGAGAGCAGAGCTGACCAACTCAGCTAGGAAGGAACTCTCCCACCAAACCCTTGGGCACAATTCTTaGAGTCCTTTCCCGGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: DLRAELTNSARKELSHQTLGHNS*SPFPVY Trigger: ATACACCGGGAAAGGACTCAAAGAATTGTGCCCAAG...GGTTTGGTGGGAGAGTTCCTTCCTAGCTGAGTTGGTCAGCTCTGCTCTCAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR CCA 72 bp | CCTCTCTCATTCGATCCAAGAACCTCAGTGAAATTGTaGGTGGCACACCCAAGAGGCCCGAAGTATTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PLSFDPRTSVKL*VAHPRGPKYCR Trigger: TCTGCAATACTTCGGGCCTCTTGGGTGTGCCACCCACAATTTCACTGAGGTTCTTGGATCGAATGAGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR CCA 72 bp | AAAGCCCAGGGTACTTCCCACTGTCTCATGTCTCTCTaGCATCCGAGGATACCAAGGGAAAATCAGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KAQGTSHCLMSL*HPRIPRENQLL Trigger: CAACAGCTGATTTTCCCTTGGTATCCTCGGATGCCAGAGAGACATGAGACAGTGGGAAGTACCCTGGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTGTAGACCAGGCTTGCCCTCAAATTCATGGAGCTCTACCTTCCTCTGCCTGGAACATTCTTTTCTaGTGTCTCCCTCATCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSVDQACPQIHGALPSSAWNILF*CLPHPE Trigger: CTCAGGATGAGGGAGACACAAGAAAAGAATGTTCCA...GGCAGAGGAAGGTAGAGCTCCATGAATTTGAGGGCAAGCCTGGTCTACAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR TCA 72 bp | TCTGGCATCCGAGGATACCAAGGGAAAATCAGCTGTTaGAAGTGGAAGCCACAACTGGAACAGACTCAACCG | + |
|
Preference number: 3 (lower is better) Translates to: SGIRGYQGKISC*KWKPQLEQTQP Trigger: CGGTTGAGTCTGTTCCAGTTGTGGCTTCCACTTTCAACAGCTGATTTTCCCTTGGTATCCTCGGATGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR TCA 72 bp | CGGTCCTCTGCAAGAACAGCCAGTGTTCTAAACCACTaGGTCATCTGTCCAGCCCTTGATAGAAATTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: RSSARTASVLNH*VICPALDRNLT Trigger: AGTCAAATTTCTATCAAGGGCTGGACAGATGACTCAGTGGTTTAGAACACTGGCTGTTCTTGCAGAGGACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR TCA 72 bp | CAAATGGTCATGAGTCACCATGTGAGTACTGAGAATTaGACCTCGGTCCTCTGCAAGAACAGCCAGTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QMVMSHHVSTEN*TSVLCKNSQCS Trigger: AGAACACTGGCTGTTCTTGCAGAGGACCGAGGTTCAATTCTCAGTACTCACATGGTGACTCATGACCATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR GCA 72 bp | TGGATGCTTTGCTTTTATGCATGTTTATGCAATAGATaGCTGCCTGGTTCTCTCAGAGGCCAGAAGAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WMLCFYACLCNR*LPGSLRGQKRA Trigger: TGCCCTCTTCTGGCCTCTGAGAGAACCAGGCAGGCATCTATTGCATAAACATGCATAAAAGCAAAGCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR CCA 72 bp | GAAATGGTTTATTTCCTGATGTGGCAACTGATGTTGTaGGTATGTCCCTCCCCAACCCCCAACTCTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EMVYFLMWQLML*VCPSPTPNSFS Trigger: AGAGAAAGAGTTGGGGGTTGGGGAGGGACATACCCACAACATCAGTTGCCACATCAGGAAATAAACCATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR TCA 72 bp | CATGTGGAACATTCTTTTCTTGTGTCTCCCTCATCCTaGGAATCCTCTCTCATTCGATCCAAGAACCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HVEHSFLVSPSS*ESSLIRSKNLS Trigger: ACTGAGGTTCTTGGATCGAATGAGAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAATGTTCCACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR-3UTR CAA 90 bp | AATTCTTGGGCACAATTCTTTGAGTCCTTTCCCGGTGTATCCATTAGTAAATTCAGAACCTCAGTGAAATaGTGGGTGGCACACCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: NSWAQFFESFPGVSISKFRTSVK*WVAHPR Trigger: TCTTGGGTGTGCCACCCACAATTTCACTGAGGTTCT...GAATTTACTAATGGATACACCGGGAAAGGACTCAAAGAATTGTGCCCAAGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR GCA 72 bp | TTCTTTGTATGGATGCTTTGCTTTTATGCATGTTTATaGAATAGATGCCTGCCTGGTTCTCTCAGAGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FFVWMLCFYACL*NRCLPGSLRGQ Trigger: CTGGCCTCTGAGAGAACCAGGCAGGCATCTATTGCATAAACATGCATAAAAGCAAAGCATCCATACAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR-3UTR CAA 90 bp | TATCCATTAGTAAATTCATGTGGAACATTCTTTTCTTGTGTCTCCCTCATCCTGAGAACCTCAGTGAAATaGTGGGTGGCACACCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: YPLVNSCGTFFSCVSLILRTSVK*WVAHPR Trigger: TCTTGGGTGTGCCACCCACAATTTCACTGAGGTTCT...CAGGATGAGGGAGACACAAGAAAAGAATGTTCCACATGAATTTACTAATGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGAAGGCCACTTAAATTATTGAGTGACTGTTATACAAAGGCCACCTTAGTTCTTGGGCACAATTCTTaGAGTCCTTTCCCGGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: KRRPLKLLSDCYTKATLVLGHNS*SPFPVY Trigger: ATACACCGGGAAAGGACTCAAAGAATTGTGCCCAAG...AACTAAGGTGGCCTTTGTATAACAGTCACTCAATAATTTAAGTGGCCTTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCTTTGTATGGATGCTTTGCTTTTATGCATGTTTATGCAATAGATGCCTGCAGTTGTAGCTTTTCATaGTCTCAGCTAAGCCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FSLYGCFAFMHVYAIDACSCSFS*SQLSLR Trigger: TCTGAGGCTTAGCTGAGACAATGAAAAGCTACAACT...GCAGGCATCTATTGCATAAACATGCATAAAAGCAAAGCATCCATACAAAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR CCA 72 bp | AGGTTTAAAACAATTTATAGTACGGACAATAGAACATaGTTATCACCTCCATTTGAGTTCAAAGAGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: RFKTIYSTDNRT*LSPPFEFKEDW Trigger: CCAGTCCTCTTTGAACTCAAATGGAGGTGATAACCATGTTCTATTGTCCGTACTATAAATTGTTTTAAACCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTGTAGACCAGGCTTGCCCTCAAATTCATGGAGCTCTACCTTCCTCTGCCCACAAAGGGCAGAGCTaGCCACCAGGGCTATGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LSVDQACPQIHGALPSSAHKGQS*PPGLCI Trigger: TATGCATAGCCCTGGTGGTCAGCTCTGCCCTTTGTG...GGCAGAGGAAGGTAGAGCTCCATGAATTTGAGGGCAAGCCTGGTCTACAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| CDS-3UTR CCA 90 bp | AATTGTGGGTGGCACACCCAAGAGGCCCGAAGTATTGCAGACAGCCTCACTCTTCTTCTTATCATCTTCTaGGGAGGCTTCAGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NCGWHTQEARSIADSLTLLLIIF*GGFRAR Trigger: CCTGGCTCTGAAGCCTCCCCAGAAGATGATAAGAAG...AAGAGTGAGGCTGTCTGCAATACTTCGGGCCTCTTGGGTGTGCCACCCACAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR TCA 90 bp | AACCAGTCAAGGCAATATAGTGACACACACACACCTCAAGGTGAAGAGGAGGAGTCAGTTACAGAGCTGTaGTTTCTCCAGCCTCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: NQSRQYSDTHTPQGEEEESVTEL*FLQPRL Trigger: CAGTCGAGGCTGGAGAAATCACAGCTCTGTAACTGA...CTCCTCCTCTTCACCTTGAGGTGTGTGTGTGTCACTATATTGCCTTGACTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR GCA 90 bp | AAGCCAAGATCAAAGCCCAGGGTACTTCCCACTGTCTCATGTCTCTCTGGCATCGTCATAGGCCATAGCTaGAAAAATCCAGGTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KPRSKPRVLPTVSCLSGIVIGHS*KNPGLS Trigger: ACTGAGACCTGGATTTTTGCAGCTATGGCCTATGAC...GATGCCAGAGAGACATGAGACAGTGGGAAGTACCCTGGGCTTTGATCTTGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| CDS-3UTR CCA 90 bp | CATGTCTCTCTGGCATCCGAGGATACCAAGGGAAAATCAGCTGTTGAAAGTGGACTTCTTATCATCTTCTaGGGAGGCTTCAGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HVSLASEDTKGKSAVESGLLIIF*GGFRAR Trigger: CCTGGCTCTGAAGCCTCCCCAGAAGATGATAAGAAG...TCCACTTTCAACAGCTGATTTTCCCTTGGTATCCTCGGATGCCAGAGAGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| 3UTR CAA 72 bp | CCAGAAATGGTTTATTTCCTGATGTGGCAACTGATGTaGTGGGTATGTCCCTCCCCAACCCCCAACTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PEMVYFLMWQLM*WVCPSPTPNSF Trigger: GAAAGAGTTGGGGGTTGGGGAGGGACATACCCACAACATCAGTTGCCACATCAGGAAATAAACCATTTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| CDS-3UTR CCA 90 bp | TGGAACATTCTTTTCTTGTGTCTCCCTCATCCTGAGAATCCTCTCTCATTCGATGGATCCAATTGGTCCTaGGGTTTCTGGAGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WNILFLCLPHPENPLSFDGSNWS*GFWRSP Trigger: TGGGCTTCTCCAGAAACCCCAGGACCAATTGGATCC...ATCGAATGAGAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAATGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR TCA 90 bp | AATTCTTGGGCACAATTCTTTGAGTCCTTTCCCGGTGTATCCATTAGTAAATTCCACAAAGGGCAGAGCTaGCCACCAGGGCTATGCATA | + |
|
Preference number: 4 (lower is better) Translates to: NSWAQFFESFPGVSISKFHKGQS*PPGLCI Trigger: TATGCATAGCCCTGGTGGTCAGCTCTGCCCTTTGTG...GAATTTACTAATGGATACACCGGGAAAGGACTCAAAGAATTGTGCCCAAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR CCA 90 bp | TCCCCAACCCCCAACTCTTTCTCTGCTGAAAGTATGACTCTGTATGTGCAGTCAAGGATGAAGTCTACTTaGTCATTGAGGGATGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPTPNSFSAESMTLYVQSRMKST*SLRDVS Trigger: AGACACATCCCTCAATGACCAAGTAGACTTCATCCT...TGACTGCACATACAGAGTCATACTTTCAGCAGAGAAAGAGTTGGGGGTTGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| CDS-3UTR TCA 90 bp | AAATTCATGTGGAACATTCTTTTCTTGTGTCTCCCTCATCCTGAGAATCCTCTCTCAGTTACAGAGCTGTaGTTTCTCCAGCCTCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KFMWNILFLCLPHPENPLSVTEL*FLQPRL Trigger: CAGTCGAGGCTGGAGAAATCACAGCTCTGTAACTGA...GAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAATGTTCCACATGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR CCA 90 bp | AAATTCATGTGGAACATTCTTTTCTTGTGTCTCCCTCATCCTGAGAATCCTCTCCTTCTTATCATCTTCTaGGGAGGCTTCAGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KFMWNILFLCLPHPENPLLLIIF*GGFRAR Trigger: CCTGGCTCTGAAGCCTCCCCAGAAGATGATAAGAAG...GAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAATGTTCCACATGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTCTTGTGTCTCCCTCATCCTGAGAATCCTCTCTCATTCGATCCAAGAAGTCATAGGCCATAGCTaGAAAAATCCAGGTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FFSCVSLILRILSHSIQEVIGHS*KNPGLS Trigger: ACTGAGACCTGGATTTTTGCAGCTATGGCCTATGAC...TTCTTGGATCGAATGAGAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| 3UTR CAA 72 bp | ACTCAGCTAGGAAGGAACTCTCCCACCAAACCTGTATaGAGACTTTGTTTTGGACTACACATGGTCTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQLGRNSPTKPV*RLCFGLHMVYS Trigger: TGAATAGACCATGTGTAGTCCAAAACAAAGTCTCAATACAGGTTTGGTGGGAGAGTTCCTTCCTAGCTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216242.3 |
||
| CDS-3UTR TCA 90 bp | TATCCATTAGTAAATTCATGTGGAACATTCTTTTCTTGTGTCTCCCTCATCCTGTCAGTTACAGAGCTGTaGTTTCTCCAGCCTCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: YPLVNSCGTFFSCVSLILSVTEL*FLQPRL Trigger: CAGTCGAGGCTGGAGAAATCACAGCTCTGTAACTGA...CAGGATGAGGGAGACACAAGAAAAGAATGTTCCACATGAATTTACTAATGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR GCA 90 bp | AAATTCATGTGGAACATTCTTTTCTTGTGTCTCCCTCATCCTGAGAATCCTCTCGTCATAGGCCATAGCTaGAAAAATCCAGGTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KFMWNILFLCLPHPENPLVIGHS*KNPGLS Trigger: ACTGAGACCTGGATTTTTGCAGCTATGGCCTATGAC...GAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAATGTTCCACATGAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAGGCCACTTAAATTATTGAGTGACTGTTATACAAAGGCCACCTTAGTTGGATCCAATTGGTCCTaGGGTTTCTGGAGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRRPLKLLSDCYTKATLVGSNWS*GFWRSP Trigger: TGGGCTTCTCCAGAAACCCCAGGACCAATTGGATCC...AACTAAGGTGGCCTTTGTATAACAGTCACTCAATAATTTAAGTGGCCTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTCTTGTGTCTCCCTCATCCTGAGAATCCTCTCTCATTCGATCCAAGAAAGGATGAAGTCTACTTaGTCATTGAGGGATGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFSCVSLILRILSHSIQERMKST*SLRDVS Trigger: AGACACATCCCTCAATGACCAAGTAGACTTCATCCT...TTCTTGGATCGAATGAGAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR CCA 90 bp | GGGCACAATTCTTTGAGTCCTTTCCCGGTGTATCCATTAGTAAATTCATGTGGAAGGATGAAGTCTACTTaGTCATTGAGGGATGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHNSLSPFPVYPLVNSCGRMKST*SLRDVS Trigger: AGACACATCCCTCAATGACCAAGTAGACTTCATCCT...TCCACATGAATTTACTAATGGATACACCGGGAAAGGACTCAAAGAATTGTGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR TCA 90 bp | CTAATTCTTGGGCACAATTCTTTGAGTCCTTTCCCGGTGTATCCATTAGTAAATCATATGAGGCCAAAATaGGGGATAATGGGATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LILGHNSLSPFPVYPLVNHMRPK*GIMGSE Trigger: TTCTGATCCCATTATCCCTCATTTTGGCCTCATATG...ATTTACTAATGGATACACCGGGAAAGGACTCAAAGAATTGTGCCCAAGAATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR TCA 90 bp | AATTCTTGGGCACAATTCTTTGAGTCCTTTCCCGGTGTATCCATTAGTAAATTCCCCTTCCAATTAACTTaGAGAAAGCCTTCTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: NSWAQFFESFPGVSISKFPFQLT*RKPSSH Trigger: ATGTGAAGAAGGCTTTCTTCAAGTTAATTGGAAGGG...GAATTTACTAATGGATACACCGGGAAAGGACTCAAAGAATTGTGCCCAAGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAGGCCACTTAAATTATTGAGTGACTGTTATACAAAGGCCACCTTAGTTCATATGAGGCCAAAATaGGGGATAATGGGATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KRRPLKLLSDCYTKATLVHMRPK*GIMGSE Trigger: TTCTGATCCCATTATCCCTCATTTTGGCCTCATATG...AACTAAGGTGGCCTTTGTATAACAGTCACTCAATAATTTAAGTGGCCTTCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAGGCCACTTAAATTATTGAGTGACTGTTATACAAAGGCCACCTTAGTTCCCTTCCAATTAACTTaGAGAAAGCCTTCTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KRRPLKLLSDCYTKATLVPFQLT*RKPSSH Trigger: ATGTGAAGAAGGCTTTCTTCAAGTTAATTGGAAGGG...AACTAAGGTGGCCTTTGTATAACAGTCACTCAATAATTTAAGTGGCCTTCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTCTTGTGTCTCCCTCATCCTGAGAATCCTCTCTCATTCGATCCAAGAAAAGTCTACTTGGTCATaGAGGGATGTGTCTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FFSCVSLILRILSHSIQEKSTWS*RDVSAQ Trigger: CTGTGCAGACACATCCCTCAATGACCAAGTAGACTT...TTCTTGGATCGAATGAGAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR CAA 90 bp | AAATTCATGTGGAACATTCTTTTCTTGTGTCTCCCTCATCCTGAGAATCCTCTCAAGTCTACTTGGTCATaGAGGGATGTGTCTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: KFMWNILFLCLPHPENPLKSTWS*RDVSAQ Trigger: CTGTGCAGACACATCCCTCAATGACCAAGTAGACTT...GAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAATGTTCCACATGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR CAA 90 bp | GGGCACAATTCTTTGAGTCCTTTCCCGGTGTATCCATTAGTAAATTCATGTGGACCCCTTCCAATTAACTaGAAGAAAGCCTTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GHNSLSPFPVYPLVNSCGPLPIN*KKAFFT Trigger: TGTGAAGAAGGCTTTCTTCAAGTTAATTGGAAGGGG...TCCACATGAATTTACTAATGGATACACCGGGAAAGGACTCAAAGAATTGTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR CAA 90 bp | AAATTCATGTGGAACATTCTTTTCTTGTGTCTCCCTCATCCTGAGAATCCTCTCCCCCTTCCAATTAACTaGAAGAAAGCCTTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KFMWNILFLCLPHPENPLPLPIN*KKAFFT Trigger: TGTGAAGAAGGCTTTCTTCAAGTTAATTGGAAGGGG...GAGAGGATTCTCAGGATGAGGGAGACACAAGAAAAGAATGTTCCACATGAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS-3UTR CAA 90 bp | AAAAGAAGGCCACTTAAATTATTGAGTGACTGTTATACAAAGGCCACCTTAGTTAAGTCTACTTGGTCATaGAGGGATGTGTCTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: KRRPLKLLSDCYTKATLVKSTWS*RDVSAQ Trigger: CTGTGCAGACACATCCCTCAATGACCAAGTAGACTT...AACTAAGGTGGCCTTTGTATAACAGTCACTCAATAATTTAAGTGGCCTTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||
| CDS CCA 72 bp | GACATTATAGAACAAGGCCAGCTTCTTATCATCTTCTaGGGAGGCTTCAGAGCCAGGTCTCATGTACATGAC | + |
|
Preference number: 6 (lower is better) Translates to: DIIEQGQLLIIF*GGFRARSHVHD Trigger: GTCATGTACATGAGACCTGGCTCTGAAGCCTCCCCAGAAGATGATAAGAAGCTGGCCTTGTTCTATAATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094834.6 ENSMUST00000213436.3 ENSMUST00000216242.3 ENSMUST00000217334.3 |
||