Pregenerated sensors for OLFR1339 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070820Ensembl transcript IDs: ENSMUST00000094832.2, ENSMUST00000217522.3
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGAATCTAGAATCACCCAGGATATTGCCTCTGAGCATGCCTGGGTaGGCTTATCTAGATTGGGCAGGGAAGACACACCTTAACTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: WNLESPRILPLSMPG*AYLDWAGKTHLNCK Trigger: CTTACAGTTAAGGTGTGTCTTCCCTGCCCAATCTAGATAAGCCCACCCAGGCATGCTCAGAGGCAATATCCTGGGTGATTCTAGATTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR GCA 90 bp | AGAATAGCCCACCTTCTGGAACATCAGCAGGTCATATCAGGAATCTaGCTTTGCGAGCCATGTCCTTTAACCCTCAGTGAATGGTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: RIAHLLEHQQVISGI*LCEPCPLTLSEWFL Trigger: CAAGAACCATTCACTGAGGGTTAAAGGACATGGCTCGCAAAGGCAGATTCCTGATATGACCTGCTGATGTTCCAGAAGGTGGGCTATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR CCA 90 bp | AAAAGAATCAGGCTGAGTCTGAACATTCATTTTCCTCTTGCTTCCTaGCCATATCTACAATGTGAGCAGCTGCCATGGTCTCCTGCCATC | + |
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Preference number: 1 (lower is better) Translates to: KRIRLSLNIHFPLAS*PYLQCEQLPWSPAI Trigger: GATGGCAGGAGACCATGGCAGCTGCTCACATTGTAGATATGGCCAGGAAGCAAGAGGAAAATGAATGTTCAGACTCAGCCTGATTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR CCA 90 bp | TTTCCTCTTGCTTCCTGGCCATATCTACAATGTGAGCAGCTGCCATaGTCTCCTGCCATCATCATTTATTTCATCACCATGTCAGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: FPLASWPYLQCEQLP*SPAIIIYFITMSEH Trigger: ATGCTCTGACATGGTGATGAAATAAATGATGATGGCAGGAGACCATGGCAGCTGCTCACATTGTAGATATGGCCAGGAAGCAAGAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR GCA 90 bp | TTCATTTTCCTCTTGCTTCCTGGCCATATCTACAATGTGAGCAGCTaGCATGGTCTCCTGCCATCATCATTTATTTCATCACCATGTCAG | + |
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Preference number: 1 (lower is better) Translates to: FIFLLLPGHIYNVSS*HGLLPSSFISSPCQ Trigger: CTGACATGGTGATGAAATAAATGATGATGGCAGGAGACCATGGCAGCTGCTCACATTGTAGATATGGCCAGGAAGCAAGAGGAAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR TCA 90 bp | TCTGAACATTCATTTTCCTCTTGCTTCCTGGCCATATCTACAATGTaGGCAGCTGCCATGGTCTCCTGCCATCATCATTTATTTCATCAC | + |
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Preference number: 1 (lower is better) Translates to: SEHSFSSCFLAISTM*AAAMVSCHHHLFHH Trigger: GTGATGAAATAAATGATGATGGCAGGAGACCATGGCAGCTGCTCACATTGTAGATATGGCCAGGAAGCAAGAGGAAAATGAATGTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR TCA 90 bp | GAGATGTTGCTTGACAATTGGGAAGTTAGGAACAGAATGGAACAGTaGTGTTTATATAGAGATTCAATACACCGAGCATCTTTCAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: EMLLDNWEVRNRMEQ*CLYRDSIHRASFRD Trigger: GTCTCTGAAAGATGCTCGGTGTATTGAATCTCTATATAAACATCACTGTTCCATTCTGTTCCTAACTTCCCAATTGTCAAGCAACATCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR TCA 90 bp | AGCGACACATTGACAATGACCAATCCATATGTATTATGCTTAATGTaGTGCTTAACATTGTCAACTTCATGGAATCTAGAATCACCCAGG | + |
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Preference number: 1 (lower is better) Translates to: SDTLTMTNPYVLCLM*CLTLSTSWNLESPR Trigger: CCTGGGTGATTCTAGATTCCATGAAGTTGACAATGTTAAGCATCACATTAAGCATAATACATATGGATTGGTCATTGTCAATGTGTCGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR TCA 90 bp | ATAAAGATATTGATTCCAAGTCCTCTGGGTCTTGTCTTAGCATCTTaGGTAGATATAATACGCCCAGAAATCTCTCAACAGCAAATGTTA | + |
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Preference number: 1 (lower is better) Translates to: IKILIPSPLGLVLAS*VDIIRPEISQQQML Trigger: TAACATTTGCTGTTGAGAGATTTCTGGGCGTATTATATCTACTCAAGATGCTAAGACAAGACCCAGAGGACTTGGAATCAATATCTTTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR GCA 90 bp | ACCTTTACCTATTTTAACTTCTGGCAACAATCCCACAAGGTATCTTaGTATAATTACTACTATCAGCCCAATTTTATAGACAAGGCATCA | + |
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Preference number: 1 (lower is better) Translates to: TFTYFNFWQQSHKVS*YNYYYQPNFIDKAS Trigger: TGATGCCTTGTCTATAAAATTGGGCTGATAGTAGTAATTATAGCAAGATACCTTGTGGGATTGTTGCCAGAAGTTAAAATAGGTAAAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR GCA 90 bp | AAATTAAATACTGTAATAACACGACTGCCACTCAGTTCAGATTTGTaGAAAGGTTTATTAAAAGTTGCATCACGTGGGGTATTAATGGCA | + |
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Preference number: 1 (lower is better) Translates to: KLNTVITRLPLSSDL*KGLLKVASRGVLMA Trigger: TGCCATTAATACCCCACGTGATGCAACTTTTAATAAACCTTTGCACAAATCTGAACTGAGTGGCAGTCGTGTTATTACAGTATTTAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR CAA 90 bp | TGCTTAACATTGTCAACTTCATGGAATCTAGAATCACCCAGGATATaGCCTCTGAGCATGCCTGGGTGGGCTTATCTAGATTGGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: CLTLSTSWNLESPRI*PLSMPGWAYLDWAG Trigger: CCCTGCCCAATCTAGATAAGCCCACCCAGGCATGCTCAGAGGCAATATCCTGGGTGATTCTAGATTCCATGAAGTTGACAATGTTAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR-3UTR CCA 90 bp | CTACAATGTGAGCAGCTGCCATGGTCTCCTGCCATCATCATTTATTTCATCACCTTAACCCTCAGTGAATaGTTCTTGCCCATCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: LQCEQLPWSPAIIIYFITLTLSE*FLPILC Trigger: ACAGAGGATGGGCAAGAACCATTCACTGAGGGTTAA...GGTGATGAAATAAATGATGATGGCAGGAGACCATGGCAGCTGCTCACATTGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCATCACCATGTCAGAGCATATCCTAGAACTAAAAGTCAATATAACCCTTGCTGCCCATCCTCTGTGTaGGGAGGAGCAATAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: FHHHVRAYPRTKSQYNPCCPSSV*GGAIKG Trigger: CCCCTTTATTGCTCCTCCTCACACAGAGGATGGGCA...GCAAGGGTTATATTGACTTTTAGTTCTAGGATATGCTCTGACATGGTGATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR-3UTR TCA 90 bp | CACCATGGAGAAGTGAGGTCACTCTCCCTTTCTCCGAAAACTGTTCTTGCTTCTCTTGTCTTAGCATCTTaGGTAGATATAATACGCCCA | + |
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Preference number: 2 (lower is better) Translates to: HHGEVRSLSLSPKTVLASLVLAS*VDIIRP Trigger: TGGGCGTATTATATCTACTCAAGATGCTAAGACAAG...AGAAGCAAGAACAGTTTTCGGAGAAAGGGAGAGTGACCTCACTTCTCCATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGAATCAGGCTGAGTCTGAACATTCATTTTCCTCTTGCTTCCTGGCCATATCAGGAATCTGCCTTTaGGAGCCATGTCCTTTAACC | + |
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Preference number: 2 (lower is better) Translates to: QKNQAESEHSFSSCFLAISGICL*EPCPLT Trigger: GGTTAAAGGACATGGCTCGCAAAGGCAGATTCCTGA...TATGGCCAGGAAGCAAGAGGAAAATGAATGTTCAGACTCAGCCTGATTCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR-3UTR GCA 90 bp | ACAAAACAAATGCTAAACTTGCCATTGAGTATTCCTTTCTTAGGGGCTGCTTTCTCTGCCAGGGGATTTTaGCACCATGGAGAAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: TKQMLNLPLSIPFLGAAFSARGF*HHGEVR Trigger: CCTCACTTCTCCATGGTGGCAAAATCCCCTGGCAGA...GAAAGCAGCCCCTAAGAAAGGAATACTCAATGGCAAGTTTAGCATTTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCATCACCATGTCAGAGCATATCCTAGAACTAAAAGTCAATATAACCCTTGCCCCAGGAAACAGAAATaGGTCAGATACCTGATGCTC | + |
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Preference number: 2 (lower is better) Translates to: FHHHVRAYPRTKSQYNPCPRKQK*VRYLML Trigger: GAGCATCAGGTATCTGACTCATTTCTGTTTCCTGGG...GCAAGGGTTATATTGACTTTTAGTTCTAGGATATGCTCTGACATGGTGATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR-3UTR GCA 90 bp | AAAACTGTTCTTGCTTCTGATGGCGATGAAATAAAGATATTGATTCCAAGTCCTGTCATATCAGGAATCTaGCTTTGCGAGCCATGTCCT | + |
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Preference number: 2 (lower is better) Translates to: KTVLASDGDEIKILIPSPVISGI*LCEPCP Trigger: AGGACATGGCTCGCAAAGGCAGATTCCTGATATGAC...AGGACTTGGAATCAATATCTTTATTTCATCGCCATCAGAAGCAAGAACAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR-3UTR GCA 90 bp | ACAAAACAAATGCTAAACTTGCCATTGAGTATTCCTTTCTTAGGGGCTGCTTTCGCTGCCATGGTCTCCTaGCATCATCATTTATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: TKQMLNLPLSIPFLGAAFAAMVS*HHHLFH Trigger: ATGAAATAAATGATGATGGCAGGAGACCATGGCAGC...GAAAGCAGCCCCTAAGAAAGGAATACTCAATGGCAAGTTTAGCATTTGTTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR CAA 90 bp | AATAAAGATATTGATTCCAAGTCCTCTGGGTCTTGTCTTAGCATCTaGAGTAGATATAATACGCCCAGAAATCTCTCAACAGCAAATGTT | + |
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Preference number: 2 (lower is better) Translates to: NKDIDSKSSGSCLSI*SRYNTPRNLSTANV Trigger: AACATTTGCTGTTGAGAGATTTCTGGGCGTATTATATCTACTCAAGATGCTAAGACAAGACCCAGAGGACTTGGAATCAATATCTTTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR CCA 72 bp | GAATCACCCAGGATATTGCCTCTGAGCATGCCTGGGTaGGCTTATCTAGATTGGGCAGGGAAGACACACCTT | + |
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Preference number: 3 (lower is better) Translates to: ESPRILPLSMPG*AYLDWAGKTHL Trigger: AAGGTGTGTCTTCCCTGCCCAATCTAGATAAGCCCACCCAGGCATGCTCAGAGGCAATATCCTGGGTGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR CCA 72 bp | TGCCTTTGCGAGCCATGTCCTTTAACCCTCAGTGAATaGTTCTTGCCCATCCTCTGTGTGAGGAGGAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: CLCEPCPLTLSE*FLPILCVRRSN Trigger: ATTGCTCCTCCTCACACAGAGGATGGGCAAGAACCATTCACTGAGGGTTAAAGGACATGGCTCGCAAAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR CCA 72 bp | TCTAGAATCACCCAGGATATTGCCTCTGAGCATGCCTaGGTGGGCTTATCTAGATTGGGCAGGGAAGACACA | + |
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Preference number: 3 (lower is better) Translates to: SRITQDIASEHA*VGLSRLGREDT Trigger: TGTGTCTTCCCTGCCCAATCTAGATAAGCCCACCCAGGCATGCTCAGAGGCAATATCCTGGGTGATTCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR GCA 72 bp | CACCTTCTGGAACATCAGCAGGTCATATCAGGAATCTaGCTTTGCGAGCCATGTCCTTTAACCCTCAGTGAA | + |
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Preference number: 3 (lower is better) Translates to: HLLEHQQVISGI*LCEPCPLTLSE Trigger: TTCACTGAGGGTTAAAGGACATGGCTCGCAAAGGCAGATTCCTGATATGACCTGCTGATGTTCCAGAAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR GCA 72 bp | CCTTGCCTTACTTTGGTTATTTCTGCCAGGGGATTTTaGCACCATGGAGAAGTGAGGTCACTCTCCCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: PCLTLVISARGF*HHGEVRSLSLS Trigger: AGAAAGGGAGAGTGACCTCACTTCTCCATGGTGGCAAAATCCCCTGGCAGAAATAACCAAAGTAAGGCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR CCA 72 bp | GCTTCCTGGCCATATCTACAATGTGAGCAGCTGCCATaGTCTCCTGCCATCATCATTTATTTCATCACCATG | + |
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Preference number: 3 (lower is better) Translates to: ASWPYLQCEQLP*SPAIIIYFITM Trigger: CATGGTGATGAAATAAATGATGATGGCAGGAGACCATGGCAGCTGCTCACATTGTAGATATGGCCAGGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR TCA 72 bp | TCATTTTCCTCTTGCTTCCTGGCCATATCTACAATGTaGGCAGCTGCCATGGTCTCCTGCCATCATCATTTA | + |
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Preference number: 3 (lower is better) Translates to: SFSSCFLAISTM*AAAMVSCHHHL Trigger: TAAATGATGATGGCAGGAGACCATGGCAGCTGCTCACATTGTAGATATGGCCAGGAAGCAAGAGGAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR TCA 72 bp | GGGGGACTGCTATGTTTTCTTCAGGGCTTCATAGACTaGGTTGATGAGTTTCTAACTAAATCCACAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: GGLLCFLQGFID*VDEFLTKSTAA Trigger: GGCTGCTGTGGATTTAGTTAGAAACTCATCAACTCAGTCTATGAAGCCCTGAAGAAAACATAGCAGTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR GCA 72 bp | CTCTTGCTTCCTGGCCATATCTACAATGTGAGCAGCTaGCATGGTCTCCTGCCATCATCATTTATTTCATCA | + |
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Preference number: 3 (lower is better) Translates to: LLLPGHIYNVSS*HGLLPSSFISS Trigger: TGATGAAATAAATGATGATGGCAGGAGACCATGGCAGCTGCTCACATTGTAGATATGGCCAGGAAGCAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR-3UTR CAA 90 bp | GTAATCATGATAATATCATTGAGATGCTGTGTCATCTGTGAACTGAGTAACACCTTCTGCCAGGGGATTTaGCCACCATGGAGAAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: VIMIISLRCCVICELSNTFCQGI*PPWRSE Trigger: CTCACTTCTCCATGGTGGCAAAATCCCCTGGCAGAA...GGTGTTACTCAGTTCACAGATGACACAGCATCTCAATGATATTATCATGATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR TCA 72 bp | TTGATTCCAAGTCCTCTGGGTCTTGTCTTAGCATCTTaGGTAGATATAATACGCCCAGAAATCTCTCAACAG | + |
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Preference number: 3 (lower is better) Translates to: LIPSPLGLVLAS*VDIIRPEISQQ Trigger: CTGTTGAGAGATTTCTGGGCGTATTATATCTACTCAAGATGCTAAGACAAGACCCAGAGGACTTGGAATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR-3UTR CAA 90 bp | ACAAAACAAATGCTAAACTTGCCATTGAGTATTCCTTTCTTAGGGGCTGCTTTCTCTTGTCTTAGCATCTaGAGTAGATATAATACGCCC | + |
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Preference number: 3 (lower is better) Translates to: TKQMLNLPLSIPFLGAAFSCLSI*SRYNTP Trigger: GGGCGTATTATATCTACTCAAGATGCTAAGACAAGA...GAAAGCAGCCCCTAAGAAAGGAATACTCAATGGCAAGTTTAGCATTTGTTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR GCA 72 bp | ACTCAGTTCAGATTTGTGCAAAGGTTTATTAAAAGTTaGATCACGTGGGGTATTAATGGCAACACCTTTGAG | + |
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Preference number: 3 (lower is better) Translates to: TQFRFVQRFIKS*ITWGINGNTFE Trigger: CTCAAAGGTGTTGCCATTAATACCCCACGTGATGCAACTTTTAATAAACCTTTGCACAAATCTGAACTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR TCA 72 bp | CTTGACAATTGGGAAGTTAGGAACAGAATGGAACAGTaGTGTTTATATAGAGATTCAATACACCGAGCATCT | + |
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Preference number: 3 (lower is better) Translates to: LDNWEVRNRMEQ*CLYRDSIHRAS Trigger: AGATGCTCGGTGTATTGAATCTCTATATAAACATCACTGTTCCATTCTGTTCCTAACTTCCCAATTGTCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR TCA 90 bp | AGGAGGAGCAATAAAGGGGGAGGGCCACAGACTGTTCTTTCACGTACTGTTGCGGAGGCACTGTGGTGGTaGCATAGCTCATATCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RRSNKGGGPQTVLSRTVAEALWW*HSSYPA Trigger: TGCTGGATATGAGCTATGTCACCACCACAGTGCCTC...CGCAACAGTACGTGAAAGAACAGTCTGTGGCCCTCCCCCTTTATTGCTCCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR TCA 90 bp | TATTTCTGCCAGGGGATTTTGCCACCATGGAGAAGTGAGGTCACTCTCCCTTTCAGATGCACTAACATCTaGGGCACTGTGGTGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: YFCQGILPPWRSEVTLPFRCTNI*GTVVVT Trigger: TGTCACCACCACAGTGCCTCAGATGTTAGTGCATCT...GAAAGGGAGAGTGACCTCACTTCTCCATGGTGGCAAAATCCCCTGGCAGAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR CAA 72 bp | CCCTTGCCTTACTTTGGTTATTTCTGCCAGGGGATTTaGCCACCATGGAGAAGTGAGGTCACTCTCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: PLPYFGYFCQGI*PPWRSEVTLPF Trigger: GAAAGGGAGAGTGACCTCACTTCTCCATGGTGGCAAAATCCCCTGGCAGAAATAACCAAAGTAAGGCAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR CCA 90 bp | GTTCTTGCTTCTGATGGCGATGAAATAAAGATATTGATTCCAAGTCCTCTGGGTGCCTTCAGTCGACCTTaGGCTGAGCGGATTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: VLASDGDEIKILIPSPLGAFSRP*AERILR Trigger: TCTGAGAATCCGCTCAGCCCAAGGTCGACTGAAGGC...ACCCAGAGGACTTGGAATCAATATCTTTATTTCATCGCCATCAGAAGCAAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR CCA 90 bp | GTAATCATGATAATATCATTGAGATGCTGTGTCATCTGTGAACTGAGTAACACCTTTCTTGTCCCTCTCTaGGGAGGCGTTGGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VIMIISLRCCVICELSNTFLVPL*GGVGPR Trigger: CCTGGGGCCAACGCCTCCCCAGAGAGGGACAAGAAA...GGTGTTACTCAGTTCACAGATGACACAGCATCTCAATGATATTATCATGATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR CCA 90 bp | ACAAAACAAATGCTAAACTTGCCATTGAGTATTCCTTTCTTAGGGGCTGCTTTCAGACGGGAGTCCAGGTaGATCAAGGTGACAATGAGC | + |
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Preference number: 4 (lower is better) Translates to: TKQMLNLPLSIPFLGAAFRRESR*IKVTMS Trigger: GCTCATTGTCACCTTGATCCACCTGGACTCCCGTCT...GAAAGCAGCCCCTAAGAAAGGAATACTCAATGGCAAGTTTAGCATTTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR CCA 90 bp | AAAACTGTTCTTGCTTCTGATGGCGATGAAATAAAGATATTGATTCCAAGTCCTTCTCTGGGGAGGCGTTaGCCCCAGGGTTCATGTACA | + |
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Preference number: 4 (lower is better) Translates to: KTVLASDGDEIKILIPSPSLGRR*PQGSCT Trigger: TGTACATGAACCCTGGGGCCAACGCCTCCCCAGAGA...AGGACTTGGAATCAATATCTTTATTTCATCGCCATCAGAAGCAAGAACAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR TCA 90 bp | GTAATCATGATAATATCATTGAGATGCTGTGTCATCTGTGAACTGAGTAACACCCGTAAGAGGCCAGGATaGAGGAAAGAGGTACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VIMIISLRCCVICELSNTRKRPG*RKEVPG Trigger: TCCTGGTACCTCTTTCCTTCATCCTGGCCTCTTACG...GGTGTTACTCAGTTCACAGATGACACAGCATCTCAATGATATTATCATGATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR TCA 90 bp | ACCATGTCAGAGCATATCCTAGAACTAAAAGTCAATATAACCCTTGCCTTACTTGCATGGAAAGGACACTaGGGAAGAAGTACATGGGTG | + |
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Preference number: 4 (lower is better) Translates to: TMSEHILELKVNITLALLAWKGH*GRSTWV Trigger: CACCCATGTACTTCTTCCTCAGTGTCCTTTCCATGC...AAGTAAGGCAAGGGTTATATTGACTTTTAGTTCTAGGATATGCTCTGACATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR TCA 90 bp | TACAAAACAAATGCTAAACTTGCCATTGAGTATTCCTTTCTTAGGGGCTGCTTTACAACCAGCCCTCAGTaGTGCCTAACACCAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: YKTNAKLAIEYSFLRGCFTTSPQ*CLTPER Trigger: TCTTTCTGGTGTTAGGCATCACTGAGGGCTGGTTGT...AAAGCAGCCCCTAAGAAAGGAATACTCAATGGCAAGTTTAGCATTTGTTTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR GCA 90 bp | GTAATCATGATAATATCATTGAGATGCTGTGTCATCTGTGAACTGAGTAACACCATTGAGGGATGTGTCTaGACAGGCAAGCTTCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: VIMIISLRCCVICELSNTIEGCV*TGKLQN Trigger: GTTCTGAAGCTTGCCTGTGCAGACACATCCCTCAAT...GGTGTTACTCAGTTCACAGATGACACAGCATCTCAATGATATTATCATGATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR TCA 90 bp | AAAACTGTTCTTGCTTCTGATGGCGATGAAATAAAGATATTGATTCCAAGTCCTATCTATCATAGGCCATaGCAGAGAACAACCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KTVLASDGDEIKILIPSPIYHRP*QRTTSP Trigger: AGGGCTGGTTGTTCTCTGTCATGGCCTATGATAGAT...AGGACTTGGAATCAATATCTTTATTTCATCGCCATCAGAAGCAAGAACAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR CCA 90 bp | ACAAAACAAATGCTAAACTTGCCATTGAGTATTCCTTTCTTAGGGGCTGCTTTCGAGATAGTTTTCTTCTaGCAGAGGAGATGCACTAAC | + |
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Preference number: 4 (lower is better) Translates to: TKQMLNLPLSIPFLGAAFEIVFF*QRRCTN Trigger: GTTAGTGCATCTCCTCTGCCAGAAGAAAACTATCTC...GAAAGCAGCCCCTAAGAAAGGAATACTCAATGGCAAGTTTAGCATTTGTTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| 3UTR CAA 72 bp | ATTGATTCCAAGTCCTCTGGGTCTTGTCTTAGCATCTaGAGTAGATATAATACGCCCAGAAATCTCTCAACA | + |
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Preference number: 4 (lower is better) Translates to: IDSKSSGSCLSI*SRYNTPRNLST Trigger: TGTTGAGAGATTTCTGGGCGTATTATATCTACTCAAGATGCTAAGACAAGACCCAGAGGACTTGGAATCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR CAA 90 bp | GGAGGAGCAATAAAGGGGGAGGGCCACAGACTGTTCTTTCACGTACTGTTGCGAGTGACAATGAGCCCATaGCCCACAAGCGTAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: GGAIKGEGHRLFFHVLLRVTMSP*PTSVER Trigger: CCTCTCTACGCTTGTGGGCAATGGGCTCATTGTCAC...TCGCAACAGTACGTGAAAGAACAGTCTGTGGCCCTCCCCCTTTATTGCTCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS CCA 90 bp | AGCAGAGATGACATTGTAGAACAGAGCCAGTTTCTTGTCCCTCTCTaGGGAGGCGTTGGCCCCAGGGTTCATGTACATAAACATGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SRDDIVEQSQFLVPL*GGVGPRVHVHKHGR Trigger: CCTGCCATGTTTATGTACATGAACCCTGGGGCCAACGCCTCCCCAGAGAGGGACAAGAAACTGGCTCTGTTCTACAATGTCATCTCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094832.2 ENSMUST00000217522.3 |
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| CDS-3UTR CAA 90 bp | TACAAAACAAATGCTAAACTTGCCATTGAGTATTCCTTTCTTAGGGGCTGCTTTAACAGAGCCAGTTTCTaGTCCCTCTCTGGGGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: YKTNAKLAIEYSFLRGCFNRASF*SLSGEA Trigger: CGCCTCCCCAGAGAGGGACAAGAAACTGGCTCTGTT...AAAGCAGCCCCTAAGAAAGGAATACTCAATGGCAAGTTTAGCATTTGTTTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS-3UTR CAA 90 bp | TTTCATCACCATGTCAGAGCATATCCTAGAACTAAAAGTCAATATAACCCTTGCCCCCAGCCTGTTACTTaGAGGAAAGCCCTCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: FHHHVRAYPRTKSQYNPCPQPVT*RKALFT Trigger: TGTGAAGAGGGCTTTCCTCAAAGTAACAGGCTGGGG...GCAAGGGTTATATTGACTTTTAGTTCTAGGATATGCTCTGACATGGTGATGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217522.3 |
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| CDS CAA 72 bp | AACAGAGCCAGTTTCTTGTCCCTCTCTGGGGAGGCGTaGGCCCCAGGGTTCATGTACATAAACATGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: NRASFLSLSGEA*APGFMYINMAG Trigger: ACCTGCCATGTTTATGTACATGAACCCTGGGGCCAACGCCTCCCCAGAGAGGGACAAGAAACTGGCTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094832.2 ENSMUST00000217522.3 |
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| CDS CCA 72 bp | GACATTGTAGAACAGAGCCAGTTTCTTGTCCCTCTCTaGGGAGGCGTTGGCCCCAGGGTTCATGTACATAAA | + |
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Preference number: 6 (lower is better) Translates to: DIVEQSQFLVPL*GGVGPRVHVHK Trigger: TTTATGTACATGAACCCTGGGGCCAACGCCTCCCCAGAGAGGGACAAGAAACTGGCTCTGTTCTACAATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094832.2 ENSMUST00000217522.3 |
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