Pregenerated sensors for OLFR1338 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095218Ensembl transcript IDs: ENSMUST00000084315.4, ENSMUST00000214922.3, ENSMUST00000216559.3
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACCCACAGACCACACTAAACTCATATGTGAAGTTTGTATTTTATTaGTTCTGTACTGGTTCCTTTCCACAAACTATCAGCTTAGTTTTG | + |
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Preference number: 1 (lower is better) Translates to: YPQTTLNSYVKFVFY*FCTGSFPQTISLVL Trigger: CAAAACTAAGCTGATAGTTTGTGGAAAGGAACCAGTACAGAACCAATAAAATACAAACTTCACATATGAGTTTAGTGTGGTCTGTGGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR TCA 90 bp | TGTACCTTATGTACCTTGTCAATTGAGACAGACATCTTGGTTTCATaGTATTTTGTCCCAATTACTAAGTACTACAGTGGTTCAAATGCA | + |
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Preference number: 1 (lower is better) Translates to: CTLCTLSIETDILVS*YFVPITKYYSGSNA Trigger: TGCATTTGAACCACTGTAGTACTTAGTAATTGGGACAAAATATCATGAAACCAAGATGTCTGTCTCAATTGACAAGGTACATAAGGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR CCA 90 bp | AAATCTTTCCCCCTCCTGCTTTCAGGCTGGACCATGCTACTTGCTGTGGCTAAACCATCACATGGTTGCTaGGAATTGAACTCAGGACCG | + |
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Preference number: 2 (lower is better) Translates to: KSFPLLLSGWTMLLAVAKPSHGC*ELNSGP Trigger: CGGTCCTGAGTTCAATTCCCAGCAACCATGTGATGG...TTTAGCCACAGCAAGTAGCATGGTCCAGCCTGAAAGCAGGAGGGGGAAAGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGTCCCTCAAGTCACATTCCTGTTCTTTGACTGACTCTCCTACATGTTATAATCTTTCCCCCTCCTaGTTTCAGGCTGGACCATGC | + |
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Preference number: 2 (lower is better) Translates to: LWSLKSHSCSLTDSPTCYNLSPS*FQAGPC Trigger: GCATGGTCCAGCCTGAAAGCAGGAGGGGGAAAGATT...ATAACATGTAGGAGAGTCAGTCAAAGAACAGGAATGTGACTTGAGGGACCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGCAGGATTTTCACATGAGAGGTCACCATGGTTACCCACAGACCACACTACACATTCCTGTTCTTTaGCTGACTCTCCTACATGTT | + |
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Preference number: 2 (lower is better) Translates to: AVQDFHMRGHHGYPQTTLHIPVL*LTLLHV Trigger: AACATGTAGGAGAGTCAGTCAAAGAACAGGAATGTG...TAGTGTGGTCTGTGGGTAACCATGGTGACCTCTCATGTGAAAATCCTGCACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR GCA 90 bp | TTCGATGCTGTCTACAGATTAGAGCAGACGTTGGGAGGTTCTGATGAGAACCCATTTCAGGCTGGACCATaGTACTTGCTGTGGCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: FDAVYRLEQTLGGSDENPFQAGP*YLLWLK Trigger: TTTTAGCCACAGCAAGTAGCATGGTCCAGCCTGAAA...TGGGTTCTCATCAGAACCTCCCAACGTCTGCTCTAATCTGTAGACAGCATCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR GCA 90 bp | TATCAGCTTAGTTTTGTCATGACAACACATGCTCTTATACATAGTGCCTTGGCCAATCTTTCCCCCTCCTaGTTTCAGGCTGGACCATGC | + |
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Preference number: 2 (lower is better) Translates to: YQLSFVMTTHALIHSALANLSPS*FQAGPC Trigger: GCATGGTCCAGCCTGAAAGCAGGAGGGGGAAAGATT...GGCCAAGGCACTATGTATAAGAGCATGTGTTGTCATGACAAAACTAAGCTGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR CCA 90 bp | GAATTTGCTGATTGGTCAGGGAAGAGCTACTTTGAAGATGATAGGCTGTCCATACATGAGAGGTCACCATaGTTACCCACAGACCACACT | + |
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Preference number: 2 (lower is better) Translates to: EFADWSGKSYFEDDRLSIHERSP*LPTDHT Trigger: AGTGTGGTCTGTGGGTAACCATGGTGACCTCTCATG...TATGGACAGCCTATCATCTTCAAAGTAGCTCTTCCCTGACCAATCAGCAAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTTATTACACCACTCTCAAGAAGCTaGGTCATAGTGAGGTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: EVLPSTSYLGIGHQIFITPLSRS*VIVRWS Trigger: GGACCACCTCACTATGACTCAGCTTCTTGAGAGTGG...TGTAATAAATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAGGAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTCTACAGTGGTTCAAATaGACAGGTCAGATATACCCA | + |
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Preference number: 2 (lower is better) Translates to: LPGSIAFHFLSRYWPSDILQWFK*TGQIYP Trigger: TGGGTATATCTGACCTGTGCATTTGAACCACTGTAG...AATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTCCTGGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGTGCAGGATTTTCACATGAGAGGTCACCATGGTTACCCACAGACCACACTACAGCAAATGAAATATTaGAATTATGATCCAGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: AVQDFHMRGHHGYPQTTLQQMKY*NYDPAG Trigger: TCCTGCTGGATCATAATTGCAATATTTCATTTGCTG...TAGTGTGGTCTGTGGGTAACCATGGTGACCTCTCATGTGAAAATCCTGCACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAGGAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTGAAATATTGCAATTATaGTCCAGCAGGATGACTGAT | + |
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Preference number: 2 (lower is better) Translates to: LPGSIAFHFLSRYWPSDIEILQL*SSRMTD Trigger: ATCAGTCATCCTGCTGGATCATAATTGCAATATTTC...AATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTCCTGGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR TCA 90 bp | CCACAGTTAACACGTTTTGTGTTGACTGGTACGTATGCTGTTGTTTTCTGTAAACACATTCCTGTTCTTTaGCTGACTCTCCTACATGTT | + |
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Preference number: 2 (lower is better) Translates to: PQLTRFVLTGTYAVVFCKHIPVL*LTLLHV Trigger: AACATGTAGGAGAGTCAGTCAAAGAACAGGAATGTG...TTTACAGAAAACAACAGCATACGTACCAGTCAACACAAAACGTGTTAACTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR GCA 90 bp | GTGTTTGGGATTGTACCTTATGTACCTTGTCAATTGAGACAGACATCTTGGTTTCTACAGTGGTTCAAATaGACAGGTCAGATATACCCA | + |
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Preference number: 2 (lower is better) Translates to: VFGIVPYVPCQLRQTSWFLQWFK*TGQIYP Trigger: TGGGTATATCTGACCTGTGCATTTGAACCACTGTAG...AAACCAAGATGTCTGTCTCAATTGACAAGGTACATAAGGTACAATCCCAAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR TCA 90 bp | AGTTTAGTCCTTTTGCTTGACAGTCTCTTGAATACTCTAAAACTAACCTGGCACTTCCTGTTCTTTGACTaGCTCTCCTACATGTTATTT | + |
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Preference number: 2 (lower is better) Translates to: SLVLLLDSLLNTLKLTWHFLFFD*LSYMLF Trigger: AAATAACATGTAGGAGAGTCAGTCAAAGAACAGGAA...GTGCCAGGTTAGTTTTAGAGTATTCAAGAGACTGTCAAGCAAAAGGACTAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR CAA 90 bp | TATGTACCTTGTCAATTGAGACAGACATCTTGGTTTCATGATATTTaGTCCCAATTACTAAGTACTACAGTGGTTCAAATGCACAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: YVPCQLRQTSWFHDI*SQLLSTTVVQMHRS Trigger: TGACCTGTGCATTTGAACCACTGTAGTACTTAGTAATTGGGACAAAATATCATGAAACCAAGATGTCTGTCTCAATTGACAAGGTACATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR CAA 90 bp | AGGATGACTGATGTGTTTGGGATTGTACCTTATGTACCTTGTCAATaGAGACAGACATCTTGGTTTCATGATATTTTGTCCCAATTACTA | + |
|
Preference number: 2 (lower is better) Translates to: RMTDVFGIVPYVPCQ*RQTSWFHDILSQLL Trigger: TAGTAATTGGGACAAAATATCATGAAACCAAGATGTCTGTCTCAATTGACAAGGTACATAAGGTACAATCCCAAACACATCAGTCATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR GCA 90 bp | CCACAGTTAACACGTTTTGTGTTGACTGGTACGTATGCTGTTGTTTTCTGTAAACAGCAAATGAAATATTaGAATTATGATCCAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PQLTRFVLTGTYAVVFCKQQMKY*NYDPAG Trigger: TCCTGCTGGATCATAATTGCAATATTTCATTTGCTG...TTTACAGAAAACAACAGCATACGTACCAGTCAACACAAAACGTGTTAACTGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR GCA 90 bp | CTCATATGTGAAGTTTGTATTTTATTGGTTCTGTACTGGTTCCTTTCCACAAACCAGCATTTAGCTCTGTaGTGGTACAGAATTAACAAT | + |
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Preference number: 2 (lower is better) Translates to: LICEVCILLVLYWFLSTNQHLAL*WYRINN Trigger: ATTGTTAATTCTGTACCAGCACAGAGCTAAATGCTG...GTTTGTGGAAAGGAACCAGTACAGAACCAATAAAATACAAACTTCACATATGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCATCACATGGTTGCTGGGAATTaGACTCAGGACCGTAGGAAGAACAGTCAGTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QMVVSHHMVAGN*TQDRRKNSQCS Trigger: GGAGCACTGACTGTTCTTCCTACGGTCCTGAGTTCAATTCCCAGCAACCATGTGATGGCTCACAACCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGCAGTGCAGGATTTTCACATGAGAGGTCACCATGGTTACCCACAGACCACAATAACAATACCAAGATaGTGCCAGCATTTAGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: SAVQDFHMRGHHGYPQTTITIPR*CQHLAL Trigger: CAGAGCTAAATGCTGGCACAATCTTGGTATTGTTAT...TGTGGTCTGTGGGTAACCATGGTGACCTCTCATGTGAAAATCCTGCACTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR CAA 90 bp | ACACCCTTCGATGCTGTCTACAGATTAGAGCAGACGTTGGGAGGTTCTGATGAGCTGGTACGTATGCTGTaGTTTTCTGTAAACTATACC | + |
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Preference number: 3 (lower is better) Translates to: TPFDAVYRLEQTLGGSDELVRML*FSVNYT Trigger: GGTATAGTTTACAGAAAACAACAGCATACGTACCAG...CTCATCAGAACCTCCCAACGTCTGCTCTAATCTGTAGACAGCATCGAAGGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR CCA 72 bp | CCCTCCTGCTTTCAGGCTGGACCATGCTACTTGCTGTaGCTAAAAGGATGTGTAGAAAGAGATTTCATTACA | + |
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Preference number: 3 (lower is better) Translates to: PSCFQAGPCYLL*LKGCVERDFIT Trigger: TGTAATGAAATCTCTTTCTACACATCCTTTTAGCCACAGCAAGTAGCATGGTCCAGCCTGAAAGCAGGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR GCA 72 bp | GATTACATATCTATAGACAAAAATCTTTCCCCCTCCTaGTTTCAGGCTGGACCATGCTACTTGCTGTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: DYISIDKNLSPS*FQAGPCYLLWL Trigger: TAGCCACAGCAAGTAGCATGGTCCAGCCTGAAAGCAGGAGGGGGAAAGATTTTTGTCTATAGATATGTAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR TCA 72 bp | AGGATGTGTAGAAAGAGATTTCATTACAGATGGTTGTaGGCCATCACATGGTTGCTGGGAATTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: RMCRKRFHYRWL*AITWLLGIELR Trigger: CCTGAGTTCAATTCCCAGCAACCATGTGATGGCTCACAACCATCTGTAATGAAATCTCTTTCTACACATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR CCA 72 bp | TTGCTTGACAGTCTCTTGAATACTCTAAAACTAACCTaGCACATCCTGGGCTTTAGAACAATAAAGGGGTTA | + |
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Preference number: 3 (lower is better) Translates to: LLDSLLNTLKLT*HILGFRTIKGL Trigger: TAACCCCTTTATTGTTCTAAAGCCCAGGATGTGCCAGGTTAGTTTTAGAGTATTCAAGAGACTGTCAAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR CAA 90 bp | CCACAGTTAACACGTTTTGTGTTGACTGGTACGTATGCTGTTGTTTTCTGTAAATTGCTTGACAGTCTCTaGAATACTCTAAAACTAACC | + |
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Preference number: 3 (lower is better) Translates to: PQLTRFVLTGTYAVVFCKLLDSL*NTLKLT Trigger: GGTTAGTTTTAGAGTATTCAAGAGACTGTCAAGCAA...TTTACAGAAAACAACAGCATACGTACCAGTCAACACAAAACGTGTTAACTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR TCA 72 bp | ATGTGTTTGGGATTGTACCTTATGTACCTTGTCAATTaGGACAGACATCTTGGTTTCATGATATTTTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: MCLGLYLMYLVN*DRHLGFMIFCP Trigger: GGGACAAAATATCATGAAACCAAGATGTCTGTCTCAATTGACAAGGTACATAAGGTACAATCCCAAACACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTTATTACATATGTACCTTGTCAATaGAGACAGACATCTTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: EVLPSTSYLGIGHQIFITYVPCQ*RQTSWF Trigger: AAACCAAGATGTCTGTCTCAATTGACAAGGTACATA...TGTAATAAATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR-3UTR CAA 90 bp | TACTTTGAAGATGATAGGCTGTCCATAAGAATAACCATCATAGGAAGAAAAGGATATGTACCTTGTCAATaGAGACAGACATCTTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: YFEDDRLSIRITIIGRKGYVPCQ*RQTSWF Trigger: AAACCAAGATGTCTGTCTCAATTGACAAGGTACATA...TCCTTTTCTTCCTATGATGGTTATTCTTATGGACAGCCTATCATCTTCAAAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR TCA 72 bp | TGTACCTTGTCAATTGAGACAGACATCTTGGTTTCATaGTATTTTGTCCCAATTACTAAGTACTACAGTGGT | + |
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Preference number: 3 (lower is better) Translates to: CTLSIETDILVS*YFVPITKYYSG Trigger: ACCACTGTAGTACTTAGTAATTGGGACAAAATATCATGAAACCAAGATGTCTGTCTCAATTGACAAGGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR TCA 72 bp | CAGCATTTAGCTCTGTGCTGGTACAGAATTAACAATTaGATATACATCTTCACATACTGTACCCTAAAACCA | + |
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Preference number: 3 (lower is better) Translates to: QHLALCWYRINN*IYIFTYCTLKP Trigger: TGGTTTTAGGGTACAGTATGTGAAGATGTATATTCAATTGTTAATTCTGTACCAGCACAGAGCTAAATGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR CCA 72 bp | GTACCTTATGTACCTTGTCAATTGAGACAGACATCTTaGTTTCATGATATTTTGTCCCAATTACTAAGTACT | + |
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Preference number: 3 (lower is better) Translates to: VPYVPCQLRQTS*FHDILSQLLST Trigger: AGTACTTAGTAATTGGGACAAAATATCATGAAACCAAGATGTCTGTCTCAATTGACAAGGTACATAAGGTAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR GCA 90 bp | CATAGGAAGAAAAGGAAAAAGTGGGTAGTGTCCAAAGGTAAGACACACCCTTCGGATCCAAGTCCCTGCTaGCAATCGTATGCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: HRKKRKKWVVSKGKTHPSDPSPC*QSYAQA Trigger: GGCCTGTGCATACGATTGGCAGCAGGGACTTGGATC...CGAAGGGTGTGTCTTACCTTTGGACACTACCCACTTTTTCCTTTTCTTCCTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR CAA 72 bp | CTTTCCCCCTCCTGCTTTCAGGCTGGACCATGCTACTaGCTGTGGCTAAAAGGATGTGTAGAAAGAGATTTC | + |
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Preference number: 4 (lower is better) Translates to: LSPSCFQAGPCY*LWLKGCVERDF Trigger: GAAATCTCTTTCTACACATCCTTTTAGCCACAGCAAGTAGCATGGTCCAGCCTGAAAGCAGGAGGGGGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR TCA 90 bp | GCAGTGCAGGATTTTCACATGAGAGGTCACCATGGTTACCCACAGACCACACTAAATCAGGATGAACTCTaGAACCCAACTTTGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AVQDFHMRGHHGYPQTTLNQDEL*NPTLVL Trigger: CAGAACCAAAGTTGGGTTTCAGAGTTCATCCTGATT...TAGTGTGGTCTGTGGGTAACCATGGTGACCTCTCATGTGAAAATCCTGCACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR TCA 90 bp | AAAAATCTTTCCCCCTCCTGCTTTCAGGCTGGACCATGCTACTTGCTGTGGCTAATGGCAGACTCATGGTaGAGAAAGTATGCAACAAAG | + |
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Preference number: 4 (lower is better) Translates to: KNLSPSCFQAGPCYLLWLMADSW*RKYATK Trigger: CTTTGTTGCATACTTTCTTCACCATGAGTCTGCCAT...TAGCCACAGCAAGTAGCATGGTCCAGCCTGAAAGCAGGAGGGGGAAAGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR GCA 90 bp | GGCTTTAGAACAATAAAGGGGTTATCTATCTCTCTGTGTCACTCTGGTCCCTCAAAGTACATAGGAGTGTaGAGCTGTGTGTCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GFRTIKGLSISLCHSGPSKYIGV*SCVSRQ Trigger: CTGCCTGGACACACAGCTGCACACTCCTATGTACTT...TGAGGGACCAGAGTGACACAGAGAGATAGATAACCCCTTTATTGTTCTAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR TCA 90 bp | CTCCCAGGAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTAGCCAGACTACGCACTaGAGGACCTTCACAGAAATA | + |
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Preference number: 4 (lower is better) Translates to: LPGSIAFHFLSRYWPSDISQTTH*RTFTEI Trigger: TATTTCTGTGAAGGTCCTTCAGTGCGTAGTCTGGCT...AATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTCCTGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR GCA 90 bp | TCCCAGGAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTTAAGTACATAGGAGTGTaGAGCTGTGTGTCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SQEVLPSTSYLGIGHQIFKYIGV*SCVSRQ Trigger: CTGCCTGGACACACAGCTGCACACTCCTATGTACTT...AAATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTCCTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR GCA 90 bp | CTCCCAGGAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTCTGAACATATACATCTaGAGCCAGCAGCCAGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LPGSIAFHFLSRYWPSDILNIYI*SQQPAK Trigger: CTTTGCTGGCTGCTGGCTGCAGATGTATATGTTCAG...AATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTCCTGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR CCA 90 bp | CTCCCAGGAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTACCATCTCAATGAGGTaGGTATCCATGCAAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LPGSIAFHFLSRYWPSDITISMR*VSMQAR Trigger: TCTGGCTTGCATGGATACCCACCTCATTGAGATGGT...AATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTCCTGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR GCA 90 bp | AGAAGGTCACTCATACTCTACAACTACAAACATGAGCAGCAAATGAAATATTGCGATCCAAGTCCCTGCTaGCAATCGTATGCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RRSLILYNYKHEQQMKYCDPSPC*QSYAQA Trigger: GGCCTGTGCATACGATTGGCAGCAGGGACTTGGATC...GCAATATTTCATTTGCTGCTCATGTTTGTAGTTGTAGAGTATGAGTGACCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR TCA 90 bp | CTCCCAGGAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTATGGCAGACTCATGGTaGAGAAAGTATGCAACAAAG | + |
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Preference number: 4 (lower is better) Translates to: LPGSIAFHFLSRYWPSDIMADSW*RKYATK Trigger: CTTTGTTGCATACTTTCTTCACCATGAGTCTGCCAT...AATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTCCTGGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR TCA 90 bp | TCCCAGGAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTTGAATATAGAAAAATGTaGCCACAGTCAGGTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQEVLPSTSYLGIGHQIFEYRKM*PQSGGR Trigger: CCTCCCACCTGACTGTGGTCACATTTTTCTATATTC...AAATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTCCTGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR GCA 90 bp | ACACCCTTCGATGCTGTCTACAGATTAGAGCAGACGTTGGGAGGTTCTGATGAGCTTGATCTTGAGAATTaGCTTGGTAATGTGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPFDAVYRLEQTLGGSDELDLEN*LGNVNV Trigger: TACATTCACATTACCAAGGCAATTCTCAAGATCAAG...CTCATCAGAACCTCCCAACGTCTGCTCTAATCTGTAGACAGCATCGAAGGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR TCA 90 bp | CTCATATGTGAAGTTTGTATTTTATTGGTTCTGTACTGGTTCCTTTCCACAAACCTATACCCAGGGCACTaGACATATACATCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LICEVCILLVLYWFLSTNLYPGH*TYTSAA Trigger: GGCTGCAGATGTATATGTTCAGTGCCCTGGGTATAG...GTTTGTGGAAAGGAACCAGTACAGAACCAATAAAATACAAACTTCACATATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR TCA 90 bp | GAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTTATTACAAGCCAGACTACGCACTaGAGGACCTTCACAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: EVLPSTSYLGIGHQIFITSQTTH*RTFTEI Trigger: TATTTCTGTGAAGGTCCTTCAGTGCGTAGTCTGGCT...TGTAATAAATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR TCA 90 bp | CCACAGTTAACACGTTTTGTGTTGACTGGTACGTATGCTGTTGTTTTCTGTAAAGAATATAGAAAAATGTaGCCACAGTCAGGTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQLTRFVLTGTYAVVFCKEYRKM*PQSGGR Trigger: CCTCCCACCTGACTGTGGTCACATTTTTCTATATTC...TTTACAGAAAACAACAGCATACGTACCAGTCAACACAAAACGTGTTAACTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR GCA 90 bp | CACCATGGTTACCCACAGACCACACTAAACTCATATGTGAAGTTTGTATTTTATCTGAACATATACATCTaGAGCCAGCAGCCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HHGYPQTTLNSYVKFVFYLNIYI*SQQPAK Trigger: CTTTGCTGGCTGCTGGCTGCAGATGTATATGTTCAG...ATAAAATACAAACTTCACATATGAGTTTAGTGTGGTCTGTGGGTAACCATGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR CCA 90 bp | GATATACCCAACAAAGACACTGTCCTTTTCTTCAATGGTGAATACTCCAGCTTCTCTGAAACCCAACTTTaGTTCTGCCTTGGAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: DIPNKDTVLFFNGEYSSFSETQL*FCLGNI Trigger: GATGTTTCCAAGGCAGAACCAAAGTTGGGTTTCAGA...GAAGCTGGAGTATTCACCATTGAAGAAAAGGACAGTGTCTTTGTTGGGTATATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR TCA 90 bp | ATGACTGATGTGTTTGGGATTGTACCTTATGTACCTTGTCAATTGAGACAGACAAATCAGGATGAACTCTaGAACCCAACTTTGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MTDVFGIVPYVPCQLRQTNQDEL*NPTLVL Trigger: CAGAACCAAAGTTGGGTTTCAGAGTTCATCCTGATT...TGTCTGTCTCAATTGACAAGGTACATAAGGTACAATCCCAAACACATCAGTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS-3UTR TCA 90 bp | AGTTTAGTCCTTTTGCTTGACAGTCTCTTGAATACTCTAAAACTAACCTGGCACAGAAGCCAATCAGGATaGACTCTGAAACCCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLVLLLDSLLNTLKLTWHRSQSG*TLKPNF Trigger: AAAGTTGGGTTTCAGAGTTCATCCTGATTGGCTTCT...GTGCCAGGTTAGTTTTAGAGTATTCAAGAGACTGTCAAGCAAAAGGACTAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS-3UTR TCA 90 bp | GATATACCCAACAAAGACACTGTCCTTTTCTTCAATGGTGAATACTCCAGCTTCAACATTGTAAAAGAGTaGGATCTGCTTGTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DIPNKDTVLFFNGEYSSFNIVKE*DLLVSL Trigger: GAGAGAGACAAGCAGATCTCACTCTTTTACAATGTT...GAAGCTGGAGTATTCACCATTGAAGAAAAGGACAGTGTCTTTGTTGGGTATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS-3UTR GCA 90 bp | TACTTTGAAGATGATAGGCTGTCCATAAGAATAACCATCATAGGAAGAAAAGGATCACAACAAAGAGGATaGTCTCAGCTATACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YFEDDRLSIRITIIGRKGSQQRG*SQLYPG Trigger: CCCTGGGTATAGCTGAGAGCATCCTCTTTGTTGTGA...TCCTTTTCTTCCTATGATGGTTATTCTTATGGACAGCCTATCATCTTCAAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGGAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTCTTGATCTTGAGAATTaGCTTGGTAATGTGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPGSIAFHFLSRYWPSDILDLEN*LGNVNV Trigger: TACATTCACATTACCAAGGCAATTCTCAAGATCAAG...AATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTCCTGGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS-3UTR CCA 90 bp | CTCATATGTGAAGTTTGTATTTTATTGGTTCTGTACTGGTTCCTTTCCACAAACACCATCTCAATGAGGTaGGTATCCATGCAAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LICEVCILLVLYWFLSTNTISMR*VSMQAR Trigger: TCTGGCTTGCATGGATACCCACCTCATTGAGATGGT...GTTTGTGGAAAGGAACCAGTACAGAACCAATAAAATACAAACTTCACATATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS-3UTR TCA 90 bp | GAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTTATTACAAGAAGCCAATCAGGATaGACTCTGAAACCCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: EVLPSTSYLGIGHQIFITRSQSG*TLKPNF Trigger: AAAGTTGGGTTTCAGAGTTCATCCTGATTGGCTTCT...TGTAATAAATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS-3UTR GCA 90 bp | GATATACCCAACAAAGACACTGTCCTTTTCTTCAATGGTGAATACTCCAGCTTCCATTACCTTGAGAAATaGCCTCTTAATGTCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DIPNKDTVLFFNGEYSSFHYLEK*PLNVLV Trigger: AACAAGGACATTAAGAGGGCATTTCTCAAGGTAATG...GAAGCTGGAGTATTCACCATTGAAGAAAAGGACAGTGTCTTTGTTGGGTATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR CCA 90 bp | GAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTTATTACATCTGAAACCCAACTTTaGTTCTGCCTTGGAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: EVLPSTSYLGIGHQIFITSETQL*FCLGNI Trigger: GATGTTTCCAAGGCAGAACCAAAGTTGGGTTTCAGA...TGTAATAAATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS-3UTR TCA 90 bp | CTAAAAGGATGTGTAGAAAGAGATTTCATTACAGATGGTTGTGAGCCATCACATAACATTGTAAAAGAGTaGGATCTGCTTGTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKGCVERDFITDGCEPSHNIVKE*DLLVSL Trigger: GAGAGAGACAAGCAGATCTCACTCTTTTACAATGTT...ATGTGATGGCTCACAACCATCTGTAATGAAATCTCTTTCTACACATCCTTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR CAA 72 bp | GATGTGTTTGGGATTGTACCTTATGTACCTTGTCAATaGAGACAGACATCTTGGTTTCATGATATTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVFGIVPYVPCQ*RQTSWFHDILS Trigger: GGACAAAATATCATGAAACCAAGATGTCTGTCTCAATTGACAAGGTACATAAGGTACAATCCCAAACACATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR CAA 72 bp | CTAGTATCATGCTATCCACAGTTAACACGTTTTGTGTaGACTGGTACGTATGCTGTTGTTTTCTGTAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: LVSCYPQLTRFV*TGTYAVVFCKL Trigger: TAGTTTACAGAAAACAACAGCATACGTACCAGTCAACACAAAACGTGTTAACTGTGGATAGCATGATACTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS-3UTR GCA 90 bp | GAAGTATTGCCTTCCACTTCCTATCTAGGTATTGGCCATCAGATATTTATTACACATTACCTTGAGAAATaGCCTCTTAATGTCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EVLPSTSYLGIGHQIFITHYLEK*PLNVLV Trigger: AACAAGGACATTAAGAGGGCATTTCTCAAGGTAATG...TGTAATAAATATCTGATGGCCAATACCTAGATAGGAAGTGGAAGGCAATACTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| 3UTR CAA 72 bp | TGTCAATTGAGACAGACATCTTGGTTTCATGATATTTaGTCCCAATTACTAAGTACTACAGTGGTTCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: CQLRQTSWFHDI*SQLLSTTVVQM Trigger: CATTTGAACCACTGTAGTACTTAGTAATTGGGACAAAATATCATGAAACCAAGATGTCTGTCTCAATTGACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR CAA 90 bp | TTCGATGCTGTCTACAGATTAGAGCAGACGTTGGGAGGTTCTGATGAGAACCCAAGAGGATGCTGTTGGTaGTGGGATCACTGGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FDAVYRLEQTLGGSDENPRGCCW*WDHWRS Trigger: GCTTCTCCAGTGATCCCACAACCAACAGCATCCTCT...TGGGTTCTCATCAGAACCTCCCAACGTCTGCTCTAATCTGTAGACAGCATCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS GCA 90 bp | ACCCTTTTGGGCCCACAATATGGCAGACTCATGGTGAAGAAAGTATaGAACAAAGAGGAAAAGGAACCACAGATCCAAGTCCCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLLGPQYGRLMVKKV*NKEEKEPQIQVPAA Trigger: GGCAGCAGGGACTTGGATCTGTGGTTCCTTTTCCTCTTTGTTGCATACTTTCTTCACCATGAGTCTGCCATATTGTGGGCCCAAAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084315.4 ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS GCA 90 bp | AGAGAAAGCTTTACAGCGGGCCTGGGTGGACTTGATCTTGAGAATTaGCTTGGTAATGTGAATGTAGGAAGCCACAATGAGGGAAATTGG | + |
|
Preference number: 5 (lower is better) Translates to: RESFTAGLGGLDLEN*LGNVNVGSHNEGNW Trigger: CCAATTTCCCTCATTGTGGCTTCCTACATTCACATTACCAAGGCAATTCTCAAGATCAAGTCCACCCAGGCCCGCTGTAAAGCTTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084315.4 ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR CAA 90 bp | CATAGGAAGAAAAGGAAAAAGTGGGTAGTGTCCAAAGGTAAGACACACCCTTCGATGAAGAGGATGCTGTaGGTTGTGGGATCACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HRKKRKKWVVSKGKTHPSMKRML*VVGSLE Trigger: CTCCAGTGATCCCACAACCAACAGCATCCTCTTCAT...CGAAGGGTGTGTCTTACCTTTGGACACTACCCACTTTTTCCTTTTCTTCCTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS TCA 90 bp | AATAGTGGTCAACCCTTTTGGGCCCACAATATGGCAGACTCATGGTaGAGAAAGTATGCAACAAAGAGGAAAAGGAACCACAGATCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSGQPFWAHNMADSW*RKYATKRKRNHRSK Trigger: CTTGGATCTGTGGTTCCTTTTCCTCTTTGTTGCATACTTTCTTCACCATGAGTCTGCCATATTGTGGGCCCAAAAGGGTTGACCACTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084315.4 ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR CAA 90 bp | ATGACTGATGTGTTTGGGATTGTACCTTATGTACCTTGTCAATTGAGACAGACAAGAGGATGCTGTTGGTaGTGGGATCACTGGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: MTDVFGIVPYVPCQLRQTRGCCW*WDHWRS Trigger: GCTTCTCCAGTGATCCCACAACCAACAGCATCCTCT...TGTCTGTCTCAATTGACAAGGTACATAAGGTACAATCCCAAACACATCAGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
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| CDS-3UTR CAA 90 bp | GATATACCCAACAAAGACACTGTCCTTTTCTTCAATGGTGAATACTCCAGCTTCATGAAGAGGATGCTGTaGGTTGTGGGATCACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DIPNKDTVLFFNGEYSSFMKRML*VVGSLE Trigger: CTCCAGTGATCCCACAACCAACAGCATCCTCTTCAT...GAAGCTGGAGTATTCACCATTGAAGAAAAGGACAGTGTCTTTGTTGGGTATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS-3UTR CAA 90 bp | GTGGTTCAAATGCACAGGTCAGATATACCCAACAAAGACACTGTCCTTTTCTTCTGGGTGGACTTGATCTaGAGAATTGCCTTGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: VVQMHRSDIPNKDTVLFFWVDLI*RIALVM Trigger: CATTACCAAGGCAATTCTCAAGATCAAGTCCACCCA...GAAGAAAAGGACAGTGTCTTTGTTGGGTATATCTGACCTGTGCATTTGAACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS CCA 90 bp | AATTGCCTTGGTAATGTGAATGTAGGAAGCCACAATGAGGGAAATTaGAGTAACAACCACAAAAACACTCAACACCAAGTCCACCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: NCLGNVNVGSHNEGN*SNNHKNTQHQVHHL Trigger: GAGATGGTGGACTTGGTGTTGAGTGTTTTTGTGGTTGTTACTCCAATTTCCCTCATTGTGGCTTCCTACATTCACATTACCAAGGCAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084315.4 ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS-3UTR CAA 90 bp | CCACAGTTAACACGTTTTGTGTTGACTGGTACGTATGCTGTTGTTTTCTGTAAACCAAGTCCCATTACCTaGAGAAATGCCCTCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: PQLTRFVLTGTYAVVFCKPSPIT*RNALLM Trigger: CATTAAGAGGGCATTTCTCAAGGTAATGGGACTTGG...TTTACAGAAAACAACAGCATACGTACCAGTCAACACAAAACGTGTTAACTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS-3UTR CAA 90 bp | AGTTTAGTCCTTTTGCTTGACAGTCTCTTGAATACTCTAAAACTAACCTGGCACCCAAGTCCCATTACCTaGAGAAATGCCCTCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: SLVLLLDSLLNTLKLTWHPSPIT*RNALLM Trigger: CATTAAGAGGGCATTTCTCAAGGTAATGGGACTTGG...GTGCCAGGTTAGTTTTAGAGTATTCAAGAGACTGTCAAGCAAAAGGACTAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS GCA 72 bp | CAAAGAGGAAAAGGAACCACAGATCCAAGTCCCTGCTaGCAATCGTATGCACAGGCCCCAGTTGAGGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: QRGKGTTDPSPC*QSYAQAPVEDD Trigger: GTCATCCTCAACTGGGGCCTGTGCATACGATTGGCAGCAGGGACTTGGATCTGTGGTTCCTTTTCCTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084315.4 ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS TCA 72 bp | TGTTGGTTGTGGGATCACTGGAGAAGCCAATCAGGATaGACTCTGAAACCCAACTTTGGTTCTGCCTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CWLWDHWRSQSG*TLKPNFGSALE Trigger: TTCCAAGGCAGAACCAAAGTTGGGTTTCAGAGTTCATCCTGATTGGCTTCTCCAGTGATCCCACAACCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084315.4 ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS TCA 72 bp | AATGAGGTGGGTATCCATGCAAGCCAGACTACGCACTaGAGGACCTTCACAGAAATAGTGGTCAACCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: NEVGIHASQTTH*RTFTEIVVNPF Trigger: AAAAGGGTTGACCACTATTTCTGTGAAGGTCCTTCAGTGCGTAGTCTGGCTTGCATGGATACCCACCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084315.4 ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS TCA 72 bp | TGTGGGATCACTGGAGAAGCCAATCAGGATGAACTCTaGAACCCAACTTTGGTTCTGCCTTGGAAACATCCA | + |
|
Preference number: 6 (lower is better) Translates to: CGITGEANQDEL*NPTLVLPWKHP Trigger: TGGATGTTTCCAAGGCAGAACCAAAGTTGGGTTTCAGAGTTCATCCTGATTGGCTTCTCCAGTGATCCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS GCA 72 bp | TTTACAGCGGGCCTGGGTGGACTTGATCTTGAGAATTaGCTTGGTAATGTGAATGTAGGAAGCCACAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: FTAGLGGLDLEN*LGNVNVGSHNE Trigger: CTCATTGTGGCTTCCTACATTCACATTACCAAGGCAATTCTCAAGATCAAGTCCACCCAGGCCCGCTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084315.4 ENSMUST00000214922.3 ENSMUST00000216559.3 |
||
| CDS TCA 72 bp | CAACCCTTTTGGGCCCACAATATGGCAGACTCATGGTaGAGAAAGTATGCAACAAAGAGGAAAAGGAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: QPFWAHNMADSW*RKYATKRKRNH Trigger: GTGGTTCCTTTTCCTCTTTGTTGCATACTTTCTTCACCATGAGTCTGCCATATTGTGGGCCCAAAAGGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084315.4 ENSMUST00000214922.3 ENSMUST00000216559.3 |
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