Pregenerated sensors for OLFR1336 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048620Ensembl transcript IDs: ENSMUST00000056120.5, ENSMUST00000214301.3
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATGACCTTGAACTCCAGATCCTTCTGCCTCCACCTTACAAGCTCTaGGATTACAGCCAGGCACCCCTACACCCCATTTATGTAGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: DDLELQILLPPPYKL*DYSQAPLHPIYVGL Trigger: CAGCCCTACATAAATGGGGTGTAGGGGTGCCTGGCTGTAATCTCAGAGCTTGTAAGGTGGAGGCAGAAGGATCTGGAGTTCAAGGTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR CCA 90 bp | AGTACCCCCAGAGCTCATATCTCTAGCTGCATATGTAGCAGAAGATaGCCTAGTTGGCCATCACTGGGAAGAGAGGCCCCTTGGTATTGC | + |
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Preference number: 1 (lower is better) Translates to: STPRAHISSCICSRR*PSWPSLGREAPWYC Trigger: GCAATACCAAGGGGCCTCTCTTCCCAGTGATGGCCAACTAGGCCATCTTCTGCTACATATGCAGCTAGAGATATGAGCTCTGGGGGTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR GCA 90 bp | GTCTCATATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGTGGATaGTCACAGTCATCTATAAGATGGAACACAGGGCCCCCAATGGAG | + |
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Preference number: 1 (lower is better) Translates to: VSYEAMPVPGKYRSG*SQSSIRWNTGPPME Trigger: CTCCATTGGGGGCCCTGTGTTCCATCTTATAGATGACTGTGAGCATCCACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATATGAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR CCA 90 bp | TCTCTAGCTGCATATGTAGCAGAAGATGGCCTAGTTGGCCATCACTaGGAAGAGAGGCCCCTTGGTATTGCAAACTTTATATGCCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: SLAAYVAEDGLVGHH*EERPLGIANFICPS Trigger: ACTGGGGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTTCCCAGTGATGGCCAACTAGGCCATCTTCTGCTACATATGCAGCTAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR TCA 90 bp | ACCAGAAAGATTTTGCTGAAGGGACCCTGTTATAGCTGTCTCATATaGGGCTATGCCAGTGCCTGGCAAATACAGAAGTGGATGCTCACA | + |
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Preference number: 1 (lower is better) Translates to: TRKILLKGPCYSCLI*GYASAWQIQKWMLT Trigger: TGTGAGCATCCACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATATGAGACAGCTATAACAGGGTCCCTTCAGCAAAATCTTTCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR GCA 90 bp | CAACAATATGAACTAACCAGTACCCCCAGAGCTCATATCTCTAGCTaGATATGTAGCAGAAGATGGCCTAGTTGGCCATCACTGGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: QQYELTSTPRAHISS*ICSRRWPSWPSLGR Trigger: TCTTCCCAGTGATGGCCAACTAGGCCATCTTCTGCTACATATGCAGCTAGAGATATGAGCTCTGGGGGTACTGGTTAGTTCATATTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR CCA 90 bp | ATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAAGAATaGATACAGAAAATGTGGTACATTTGCACAATGGAGTACTACTCT | + |
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Preference number: 1 (lower is better) Translates to: IARSWKEPRCPSTEE*IQKMWYICTMEYYS Trigger: AGAGTAGTACTCCATTGTGCAAATGTACCACATTTTCTGTATCCATTCTTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR TCA 90 bp | ACCATTGATGAGAGTGGTGTGTTGAAGTCTCCCACTATTATTGTGTaGGGTGCAATGTGTGCTTTGAGCTTTACTAGAGTTTCTTTAATG | + |
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Preference number: 1 (lower is better) Translates to: TIDESGVLKSPTIIV*GAMCALSFTRVSLM Trigger: CATTAAAGAAACTCTAGTAAAGCTCAAAGCACACATTGCACCTCACACAATAATAGTGGGAGACTTCAACACACCACTCTCATCAATGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR GCA 90 bp | GACCAATGGGTGGATACTTCATTCCTCCTTAGAATAGGGAACAAAATACCCATGCCCAGTACAGGGGAATaGCAGGGCCAAGAAGCGGGA | + |
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Preference number: 2 (lower is better) Translates to: DQWVDTSFLLRIGNKIPMPSTGE*QGQEAG Trigger: TCCCGCTTCTTGGCCCTGGCATTCCCCTGTACTGGG...CATGGGTATTTTGTTCCCTATTCTAAGGAGGAATGAAGTATCCACCCATTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR TCA 90 bp | GTTGTGCCTGTATGTACATATGTGCCTAGTGATGCAGAGGCCGCAAAAAGATATGTCTGTCCTTTTCCCTaGGGTGGGTTTCCTGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: VVPVCTYVPSDAEAAKRYVCPFP*GGFPVS Trigger: GCTTACAGGAAACCCACCTCAGGGAAAAGGACAGAC...ATATCTTTTTGCGGCCTCTGCATCACTAGGCACATATGTACATACAGGCACAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGAGAGGTCTCACAGTGGTTATGAGCACTTGTTGATCTTGCAGAGAACTGCAACAGACCTGCCATaGAAACAGTTGAACTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: RLERSHSGYEHLLILQRTATDLP*KQLNCQ Trigger: CTGACAGTTCAACTGTTTCCATGGCAGGTCTGTTGC...AGTTCTCTGCAAGATCAACAAGTGCTCATAACCACTGTGAGACCTCTCCAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR TCA 90 bp | ATTCATTCTGGTTTCACACACTTGACACAATGCTTAACCAACATTTTCCATCTTAGAAGCGGGAGTGGGTaGGTAGGGGAGGAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: IHSGFTHLTQCLTNIFHLRSGSG*VGEEGR Trigger: TCTGCCCTCCTCCCCTACTCACCCACTCCCGCTTCT...AAGATGGAAAATGTTGGTTAAGCATTGTGTCAAGTGTGTGAAACCAGAATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGTTTGTGTAGCCAGTCTATTAGTCTATGTCTTTTATTGGGGAATTGAGTCCCCCAATACAGGGGAATaGCAGGGCCAAGAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PVCVASLLVYVFYWGIESPNTGE*QGQEAG Trigger: TCCTGCTTCTTGGCCCTGGCATTCCCCTGTATTGGG...GGACTCAATTCCCCAATAAAAGACATAGACTAATAGACTGGCTACACAAACAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGTTTGTGTAGCCAGTCTATTAGTCTATGTCTTTTATTGGGGAATTGAGTCCCTTGATTCTGGCCTCTaGAGGGACCTGTGTGCATGT | + |
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Preference number: 2 (lower is better) Translates to: PVCVASLLVYVFYWGIESLDSGL*RDLCAC Trigger: ACATGCACACAGGTCCCTGCAGAGGCCAGAATCAAG...GGACTCAATTCCCCAATAAAAGACATAGACTAATAGACTGGCTACACAAACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR TCA 90 bp | TTCATCTTGGTAGATTTTAACTTTGATGAGTATGAAGTGTCCCTCCTTGTCTTTAGGAGATCCGATGCTTaGTTCTGGCCTCTGCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: FILVDFNFDEYEVSLLVFRRSDA*FWPLQG Trigger: TCCCTGCAGAGGCCAGAATCAAGCATCGGATCTCCT...AAAGACAAGGAGGGACACTTCATACTCATCAAAGTTAAAATCTACCAAGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR GCA 90 bp | GTTGTGCCTGTATGTACATATGTGCCTAGTGATGCAGAGGCCGCAAAAAGATATGCTCATATCTCTAGCTaGATATGTAGCAGAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: VVPVCTYVPSDAEAAKRYAHISS*ICSRRW Trigger: CCATCTTCTGCTACATATGCAGCTAGAGATATGAGC...ATATCTTTTTGCGGCCTCTGCATCACTAGGCACATATGTACATACAGGCACAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTGCTTTGAGCTTTACTAGAGTTTCTTTAATGAATGTGGCTGCCCTTGCAGTGTTCAGAGTCAATTaGCAACAGACCTGCCATGGA | + |
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Preference number: 2 (lower is better) Translates to: MCALSFTRVSLMNVAALAVFRVN*QQTCHG Trigger: TCCATGGCAGGTCTGTTGCCAATTGACTCTGAACAC...TGCAAGGGCAGCCACATTCATTAAAGAAACTCTAGTAAAGCTCAAAGCACACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CCA 90 bp | TTCATCTTGGTAGATTTTAACTTTGATGAGTATGAAGTGTCCCTCCTTGTCTTTAGAAGCAGGAGTAGGTaGTTAGGGGAGCAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: FILVDFNFDEYEVSLLVFRSRSR*LGEQGR Trigger: TCTGCCCTGCTCCCCTAACCACCTACTCCTGCTTCT...AAAGACAAGGAGGGACACTTCATACTCATCAAAGTTAAAATCTACCAAGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR GCA 90 bp | ATTTCATCCTTGACCAAGGAATCATTGAGTGTTGTTCAGTTTCCACATGAATGTGGAGCTGAAGGGGTTTaGAACCCTATAGGTGGAACA | + |
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Preference number: 2 (lower is better) Translates to: ISSLTKESLSVVQFPHECGAEGV*NPIGGT Trigger: TGTTCCACCTATAGGGTTGCAAACCCCTTCAGCTCC...ACATTCATGTGGAAACTGAACAACACTCAATGATTCCTTGGTCAAGGATGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTCATCCTTGACCAAGGAATCATTGAGTGTTGTTCAGTTTCCACATGAATGTTGTCAAGGAAACACATaGACCACGGACACCTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: ISSLTKESLSVVQFPHECCQGNT*TTDTCY Trigger: GTAGCAGGTGTCCGTGGTCCATGTGTTTCCTTGACA...ACATTCATGTGGAAACTGAACAACACTCAATGATTCCTTGGTCAAGGATGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR GCA 90 bp | GGATACAGAAAATGTGGTACATTTGCACAATGGAGTACTACTCTGCTATTTAAACTGCAGGGACCTGTGTaGATGTACATATACTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: GYRKCGTFAQWSTTLLFKLQGPV*MYIYSC Trigger: GCAAGAGTATATGTACATGCACACAGGTCCCTGCAG...TTTAAATAGCAGAGTAGTACTCCATTGTGCAAATGTACCACATTTTCTGTATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR GCA 90 bp | ATTCATTCTGGTTTCACACACTTGACACAATGCTTAACCAACATTTTCCATCTTTTCATATATACTGTTTaGCCTCCCCCACCACTCCCA | + |
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Preference number: 2 (lower is better) Translates to: IHSGFTHLTQCLTNIFHLFIYTV*PPPPLP Trigger: TGGGAGTGGTGGGGGAGGGCAAACAGTATATATGAA...AAGATGGAAAATGTTGGTTAAGCATTGTGTCAAGTGTGTGAAACCAGAATGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR CAA 90 bp | CCCATAGAAGCCCACTTTCTGCATGTGTATGCAGAAGGTATACGTTaGTGTGACTTTAAATGTATATATAAGTTTGGCTATGTTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: PIEAHFLHVYAEGIR*CDFKCIYKFGYVVA Trigger: AGCCACAACATAGCCAAACTTATATATACATTTAAAGTCACACAAACGTATACCTTCTGCATACACATGCAGAAAGTGGGCTTCTATGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR TCA 90 bp | TTCATCTTGGTAGATTTTAACTTTGATGAGTATGAAGTGTCCCTCCTTGTCTTTTGCCATGGAAACAGTTaGACTGTCAGTGAATGGACT | + |
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Preference number: 2 (lower is better) Translates to: FILVDFNFDEYEVSLLVFCHGNS*TVSEWT Trigger: AGTCCATTCACTGACAGTTCAACTGTTTCCATGGCA...AAAGACAAGGAGGGACACTTCATACTCATCAAAGTTAAAATCTACCAAGATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR TCA 90 bp | GGATACAGAAAATGTGGTACATTTGCACAATGGAGTACTACTCTGCTATTTAAAGTTATGAGCACTTGTTaGTCTTGCAGAGAACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GYRKCGTFAQWSTTLLFKVMSTC*SCRELE Trigger: CTCCAGTTCTCTGCAAGATCAACAAGTGCTCATAAC...TTTAAATAGCAGAGTAGTACTCCATTGTGCAAATGTACCACATTTTCTGTATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR GCA 90 bp | GGATACAGAAAATGTGGTACATTTGCACAATGGAGTACTACTCTGCTATTTAAATGGACCACGGACACCTaGTACACTAGTCATAAACTT | + |
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Preference number: 2 (lower is better) Translates to: GYRKCGTFAQWSTTLLFKWTTDT*YTSHKL Trigger: AAGTTTATGACTAGTGTAGCAGGTGTCCGTGGTCCA...TTTAAATAGCAGAGTAGTACTCCATTGTGCAAATGTACCACATTTTCTGTATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR GCA 90 bp | ATTTCATCCTTGACCAAGGAATCATTGAGTGTTGTTCAGTTTCCACATGAATGTGAATGTGGCTGCCCTTaGATTTGGAGCATAGATATT | + |
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Preference number: 2 (lower is better) Translates to: ISSLTKESLSVVQFPHECECGCP*IWSIDI Trigger: AATATCTATGCTCCAAATGCAAGGGCAGCCACATTC...ACATTCATGTGGAAACTGAACAACACTCAATGATTCCTTGGTCAAGGATGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTATCTGGAGGATATCATCCTTAGTGAGGTAACCCAATCACAAAAGAAGTCACAATCAGTTAACATCTaGCTAGCTCAGCAATTCTAC | + |
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Preference number: 2 (lower is better) Translates to: MYLEDIILSEVTQSQKKSQSVNI*LAQQFY Trigger: GTAGAATTGCTGAGCTAGCCAGATGTTAACTGATTG...TGACTTCTTTTGTGATTGGGTTACCTCACTAAGGATGATATCCTCCAGATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTTGTGTAGCCAGTCTATTAGTCTATGTCTTTTATTGGGGAATTGAGTCCGGTACATTTGCACAATaGAGTACTACTCTGCTATTT | + |
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Preference number: 2 (lower is better) Translates to: PVCVASLLVYVFYWGIESGTFAQ*STTLLF Trigger: AAATAGCAGAGTAGTACTCCATTGTGCAAATGTACC...GGACTCAATTCCCCAATAAAAGACATAGACTAATAGACTGGCTACACAAACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CCA 90 bp | ATTCATTCTGGTTTCACACACTTGACACAATGCTTAACCAACATTTTCCATCTTAAGAGGAAAGACCAATaGGTGGATACTTCATTCCTC | + |
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Preference number: 2 (lower is better) Translates to: IHSGFTHLTQCLTNIFHLKRKDQ*VDTSFL Trigger: GAGGAATGAAGTATCCACCCATTGGTCTTTCCTCTT...AAGATGGAAAATGTTGGTTAAGCATTGTGTCAAGTGTGTGAAACCAGAATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR TCA 90 bp | TTCATCTTGGTAGATTTTAACTTTGATGAGTATGAAGTGTCCCTCCTTGTCTTTCAGTTGAACTGTCAGTaGATGGACTATGTAAACACA | + |
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Preference number: 2 (lower is better) Translates to: FILVDFNFDEYEVSLLVFQLNCQ*MDYVNT Trigger: TGTGTTTACATAGTCCATTCACTGACAGTTCAACTG...AAAGACAAGGAGGGACACTTCATACTCATCAAAGTTAAAATCTACCAAGATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR GCA 90 bp | TTCATCTTGGTAGATTTTAACTTTGATGAGTATGAAGTGTCCCTCCTTGTCTTTGGTAATAAGAACACATaGTCCACTACGTTCATAGCA | + |
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Preference number: 2 (lower is better) Translates to: FILVDFNFDEYEVSLLVFGNKNT*STTFIA Trigger: TGCTATGAACGTAGTGGAGCATGTGTTCTTATTACC...AAAGACAAGGAGGGACACTTCATACTCATCAAAGTTAAAATCTACCAAGATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR TCA 90 bp | TTCATCTTGGTAGATTTTAACTTTGATGAGTATGAAGTGTCCCTCCTTGTCTTTGGTTGTGCAACTTTGTaGAAATATTCAAACACTGAG | + |
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Preference number: 2 (lower is better) Translates to: FILVDFNFDEYEVSLLVFGCATL*KYSNTE Trigger: CTCAGTGTTTGAATATTTTCACAAAGTTGCACAACC...AAAGACAAGGAGGGACACTTCATACTCATCAAAGTTAAAATCTACCAAGATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTCATCCTTGACCAAGGAATCATTGAGTGTTGTTCAGTTTCCACATGAATGTAAATTCTTGGACAAATaGATGTATCTGGAGGATATC | + |
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Preference number: 2 (lower is better) Translates to: ISSLTKESLSVVQFPHECKFLDK*MYLEDI Trigger: GATATCCTCCAGATACATCCATTTGTCCAAGAATTT...ACATTCATGTGGAAACTGAACAACACTCAATGATTCCTTGGTCAAGGATGAAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR GCA 72 bp | TGGGAAGAGAGGCCCCTTGGTATTGCAAACTTTATATaGCCCAGTACAGGGGAATGCCAGGGCCAAGAAGCG | + |
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Preference number: 3 (lower is better) Translates to: WEERPLGIANFI*PSTGECQGQEA Trigger: CGCTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR GCA 72 bp | GCAGCTCCAGGAGATCCGATGCTTGATTCTGGCCTCTaGAGGGACCTGTGTGCATGTACATATACTCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: AAPGDPMLDSGL*RDLCACTYTLA Trigger: TGCAAGAGTATATGTACATGCACACAGGTCCCTGCAGAGGCCAGAATCAAGCATCGGATCTCCTGGAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR TCA 72 bp | GAACTCCAGATCCTTCTGCCTCCACCTTACAAGCTCTaGGATTACAGCCAGGCACCCCTACACCCCATTTAT | + |
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Preference number: 3 (lower is better) Translates to: ELQILLPPPYKL*DYSQAPLHPIY Trigger: ATAAATGGGGTGTAGGGGTGCCTGGCTGTAATCTCAGAGCTTGTAAGGTGGAGGCAGAAGGATCTGGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR TCA 72 bp | CAGATGATTCTGAGCCACCATGTTGGTGCTGGAAACTaGACCTGGGTCCTCTGTAAAAGCAGCTTGTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: QMILSHHVGAGN*TWVLCKSSLCS Trigger: TGAGCACAAGCTGCTTTTACAGAGGACCCAGGTTCAGTTTCCAGCACCAACATGGTGGCTCAGAATCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR GCA 72 bp | GAACTAACCAGTACCCCCAGAGCTCATATCTCTAGCTaGATATGTAGCAGAAGATGGCCTAGTTGGCCATCA | + |
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Preference number: 3 (lower is better) Translates to: ELTSTPRAHISS*ICSRRWPSWPS Trigger: TGATGGCCAACTAGGCCATCTTCTGCTACATATGCAGCTAGAGATATGAGCTCTGGGGGTACTGGTTAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR TCA 72 bp | GACTATGTAAACACAGTCTGTCTGTGCAAGCCAATGTaGTTGTGTCAAGGAAACACATGGACCACGGACACC | + |
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Preference number: 3 (lower is better) Translates to: DYVNTVCLCKPM*LCQGNTWTTDT Trigger: GGTGTCCGTGGTCCATGTGTTTCCTTGACACAATCACATTGGCTTGCACAGACAGACTGTGTTTACATAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR TCA 72 bp | GGCTGGAGAGGTCTCACAGTGGTTATGAGCACTTGTTaGTCTTGCAGAGAACTGGAGTTCAGTTATTGTACC | + |
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Preference number: 3 (lower is better) Translates to: GWRGLTVVMSTC*SCRELEFSYCT Trigger: GGTACAATAACTGAACTCCAGTTCTCTGCAAGATCAACAAGTGCTCATAACCACTGTGAGACCTCTCCAGCC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR CCA 72 bp | GCATATGTAGCAGAAGATGGCCTAGTTGGCCATCACTaGGAAGAGAGGCCCCTTGGTATTGCAAACTTTATA | + |
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Preference number: 3 (lower is better) Translates to: AYVAEDGLVGHH*EERPLGIANFI Trigger: TATAAAGTTTGCAATACCAAGGGGCCTCTCTTCCCAGTGATGGCCAACTAGGCCATCTTCTGCTACATATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR TCA 72 bp | GCAACAGACCTGCCATGGAAACAGTTGAACTGTCAGTaGATGGACTATGTAAACACAGTCTGTCTGTGCAAG | + |
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Preference number: 3 (lower is better) Translates to: ATDLPWKQLNCQ*MDYVNTVCLCK Trigger: CTTGCACAGACAGACTGTGTTTACATAGTCCATTCACTGACAGTTCAACTGTTTCCATGGCAGGTCTGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR TCA 72 bp | ACGAATTATGAGGCTGGAGAGGTCTCACAGTGGTTATaGGCACTTGTTGATCTTGCAGAGAACTGGAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: TNYEAGEVSQWL*ALVDLAENWSS Trigger: TGAACTCCAGTTCTCTGCAAGATCAACAAGTGCTCATAACCACTGTGAGACCTCTCCAGCCTCATAATTCGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR CCA 72 bp | CCATCCTTGTGTTGGAAGATCCAGCAATACCTCTCCTaGGCATATACCCAGAAGTTCCAACTGGTAATAAGA | + |
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Preference number: 3 (lower is better) Translates to: PSLCWKIQQYLS*AYTQKFQLVIR Trigger: TCTTATTACCAGTTGGAACTTCTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCAACACAAGGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CAA 90 bp | CCTGTTTGTGTAGCCAGTCTATTAGTCTATGTCTTTTATTGGGGAATTGAGTCCAGTGTTCAGAGTCAATaGGCAACAGACCTGCCATGG | + |
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Preference number: 3 (lower is better) Translates to: PVCVASLLVYVFYWGIESSVQSQ*ATDLPW Trigger: CCATGGCAGGTCTGTTGCCAATTGACTCTGAACACT...GGACTCAATTCCCCAATAAAAGACATAGACTAATAGACTGGCTACACAAACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CAA 90 bp | GTTGTGCCTGTATGTACATATGTGCCTAGTGATGCAGAGGCCGCAAAAAGATATCCCTCCTTGTCTTTTTaGATAACTTTGGGTTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: VVPVCTYVPSDAEAAKRYPSLSF*ITLGWK Trigger: CTTCCAACCCAAAGTTATCAAAAAAGACAAGGAGGG...ATATCTTTTTGCGGCCTCTGCATCACTAGGCACATATGTACATACAGGCACAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR TCA 72 bp | GAGAGTGGTGTGTTGAAGTCTCCCACTATTATTGTGTaGGGTGCAATGTGTGCTTTGAGCTTTACTAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ESGVLKSPTIIV*GAMCALSFTRV Trigger: AACTCTAGTAAAGCTCAAAGCACACATTGCACCTCACACAATAATAGTGGGAGACTTCAACACACCACTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CAA 90 bp | ATGTGTGCTTTGAGCTTTACTAGAGTTTCTTTAATGAATGTGGCTGCCCTTGCAAGTGGTTATGAGCACTaGTTGATCTTGCAGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: MCALSFTRVSLMNVAALASGYEH*LILQRT Trigger: AGTTCTCTGCAAGATCAACAAGTGCTCATAACCACT...TGCAAGGGCAGCCACATTCATTAAAGAAACTCTAGTAAAGCTCAAAGCACACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CAA 90 bp | GTTGTGCCTGTATGTACATATGTGCCTAGTGATGCAGAGGCCGCAAAAAGATATATTAGCCCAGAAACATaGAACACCCAAGATACAATT | + |
|
Preference number: 3 (lower is better) Translates to: VVPVCTYVPSDAEAAKRYISPET*NTQDTI Trigger: AATTGTATCTTGGGTGTTCAATGTTTCTGGGCTAAT...ATATCTTTTTGCGGCCTCTGCATCACTAGGCACATATGTACATACAGGCACAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CAA 90 bp | GTTGTGCCTGTATGTACATATGTGCCTAGTGATGCAGAGGCCGCAAAAAGATATGTTTCTTCAGACCATTaGCTTGGAAAATTGTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VVPVCTYVPSDAEAAKRYVSSDH*LGKLFS Trigger: GGAAAACAATTTTCCAAGCAAATGGTCTGAAGAAAC...ATATCTTTTTGCGGCCTCTGCATCACTAGGCACATATGTACATACAGGCACAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTATCTGGAGGATATCATCCTTAGTGAGGTAACCCAATCACAAAAGAAGTCAAAAACGACTCGCAATTaGTACAGGTATTTCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: MYLEDIILSEVTQSQKKSKTTRN*YRYFSG Trigger: CCCAGAGAAATACCTGTACAAATTGCGAGTCGTTTT...TGACTTCTTTTGTGATTGGGTTACCTCACTAAGGATGATATCCTCCAGATACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
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| 3UTR-3UTR CAA 90 bp | ATTCATTCTGGTTTCACACACTTGACACAATGCTTAACCAACATTTTCCATCTTGAGCACTTGTTGATCTaGCAGAGAACTGGAGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: IHSGFTHLTQCLTNIFHLEHLLI*QRTGVQ Trigger: CTGAACTCCAGTTCTCTGCAAGATCAACAAGTGCTC...AAGATGGAAAATGTTGGTTAAGCATTGTGTCAAGTGTGTGAAACCAGAATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTTTGTGTAGCCAGTCTATTAGTCTATGTCTTTTATTGGGGAATTGAGTCCTTACAGAGACAAAATTaGGAGCTAAGACGAAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PVCVASLLVYVFYWGIESLQRQN*ELRRKD Trigger: GTCCTTTCGTCTTAGCTCCAAATTTTGTCTCTGTAA...GGACTCAATTCCCCAATAAAAGACATAGACTAATAGACTGGCTACACAAACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCATCCTTGACCAAGGAATCATTGAGTGTTGTTCAGTTTCCACATGAATGTGTTTCCATCCTTGTGTaGGAAGATCCAGCAATACCT | + |
|
Preference number: 3 (lower is better) Translates to: ISSLTKESLSVVQFPHECVSILV*EDPAIP Trigger: AGGTATTGCTGGATCTTCCAACACAAGGATGGAAAC...ACATTCATGTGGAAACTGAACAACACTCAATGATTCCTTGGTCAAGGATGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR CCA 72 bp | CTCATAACTGCTAAGCCATCTCTCCAGCTCCAGTCATaGTTTTATAGTGTAGCTTTTCAATATCACAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LITAKPSLQLQS*FYSVAFQYHNL Trigger: CAGATTGTGATATTGAAAAGCTACACTATAAAACCATGACTGGAGCTGGAGAGATGGCTTAGCAGTTATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCATCCTTGACCAAGGAATCATTGAGTGTTGTTCAGTTTCCACATGAATGTGATGAGAGTGGTGTGTaGAAGTCTCCCACTATTATT | + |
|
Preference number: 3 (lower is better) Translates to: ISSLTKESLSVVQFPHECDESGV*KSPTII Trigger: AATAATAGTGGGAGACTTCAACACACCACTCTCATC...ACATTCATGTGGAAACTGAACAACACTCAATGATTCCTTGGTCAAGGATGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR CCA 72 bp | CTTTGGGTTGGAAGTCAATTTTATTCCATATTAGAATaGCTGCTCCAGCTTGTTTCTTCAGACCATTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LWVGSQFYSILE*LLQLVSSDHLL Trigger: AAGCAAATGGTCTGAAGAAACAAGCTGGAGCAGCCATTCTAATATGGAATAAAATTGACTTCCAACCCAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCATCTTGGTAGATTTTAACTTTGATGAGTATGAAGTGTCCCTCCTTGTCTTTTATACCAGAAAGATTTaGCTGAAGGGACCCTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: FILVDFNFDEYEVSLLVFYTRKI*LKGPCY Trigger: ATAACAGGGTCCCTTCAGCAAAATCTTTCTGGTATA...AAAGACAAGGAGGGACACTTCATACTCATCAAAGTTAAAATCTACCAAGATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTCATTCTGGTTTCACACACTTGACACAATGCTTAACCAACATTTTCCATCTTCAAACCCAGACACTATaGCATATACCAGAAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: IHSGFTHLTQCLTNIFHLQTQTL*HIPERF Trigger: AAATCTTTCTGGTATATGCAATAGTGTCTGGGTTTG...AAGATGGAAAATGTTGGTTAAGCATTGTGTCAAGTGTGTGAAACCAGAATGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR TCA 72 bp | TTTATGTTGTTCTTGAAGATCAGCCTTAGTTCGTGGTaGTCAGATAGGATGCATGGGATAATTCCATTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: FMLFLKISLSSW*SDRMHGIIPFL Trigger: TAAAAATGGAATTATCCCATGCATCCTATCTGATCACCACGAACTAAGGCTGATCTTCAAGAACAACATAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR GCA 72 bp | TCAACACTCATACACACTCACATATGTAATGAACAGTaGCAATTTTGCTCTGAAAATTGTATCACCTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: STLIHTHICNEQ*QFCSENCITFG Trigger: ACCAAAGGTGATACAATTTTCAGAGCAAAATTGGCACTGTTCATTACATATGTGAGTGTGTATGAGTGTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR CCA 72 bp | AGCTTTTCAATATCACAATCTGTAACTATCACACTGTaGATCGCTCCTCTTATGAACCTTCATAACTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SFSISQSVTITL*IAPLMNLHNSY Trigger: ATAAGAGTTATGAAGGTTCATAAGAGGAGCGATCCACAGTGTGATAGTTACAGATTGTGATATTGAAAAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGAGAGGTCTCACAGTGGTTATGAGCACTTGTTGATCTTGCAGAGAACTCCTGTGAATGGAACATaGCAGGGCCCCGTCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLERSHSGYEHLLILQRTPVNGT*QGPVHS Trigger: GCTATGGACGGGGCCCTGTCATGTTCCATTCACAGG...AGTTCTCTGCAAGATCAACAAGTGCTCATAACCACTGTGAGACCTCTCCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR TCA 90 bp | GACCAATGGGTGGATACTTCATTCCTCCTTAGAATAGGGAACAAAATACCCATGAGTCCACCAGCTCTGTaGGGGCCACATGGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DQWVDTSFLLRIGNKIPMSPPAL*GPHGCR Trigger: CCTGCACCCATGTGGCCCTCACAGAGCTGGTGGACT...CATGGGTATTTTGTTCCCTATTCTAAGGAGGAATGAAGTATCCACCCATTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR GCA 90 bp | GACCAATGGGTGGATACTTCATTCCTCCTTAGAATAGGGAACAAAATACCCATGGGTCCATGGCTTCTATaGGGCTGGGTCGGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: DQWVDTSFLLRIGNKIPMGPWLL*GWVGHR Trigger: TCTATGCCCGACCCAGCCGCATAGAAGCCATGGACC...CATGGGTATTTTGTTCCCTATTCTAAGGAGGAATGAAGTATCCACCCATTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGAGAGGTCTCACAGTGGTTATGAGCACTTGTTGATCTTGCAGAGAACTTTATTCCCAGCCTTGTaGACAAGCCCAATAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: RLERSHSGYEHLLILQRTLFPAL*TSPIGQ Trigger: TTGTCCTATTGGGCTTGTCCACAAGGCTGGGAATAA...AGTTCTCTGCAAGATCAACAAGTGCTCATAACCACTGTGAGACCTCTCCAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR TCA 90 bp | CCTGTTTGTGTAGCCAGTCTATTAGTCTATGTCTTTTATTGGGGAATTGAGTCCTGTGGGCATGGTGACTaGCACATAGCACATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVCVASLLVYVFYWGIESCGHGD*HIAHLQ Trigger: CTGGAGATGTGCTATGTGTCAGTCACCATGCCCACA...GGACTCAATTCCCCAATAAAAGACATAGACTAATAGACTGGCTACACAAACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR TCA 90 bp | ATTTCATCCTTGACCAAGGAATCATTGAGTGTTGTTCAGTTTCCACATGAATGTAGACCTGTGGCCTCATaGGCAGTGGGTAGTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISSLTKESLSVVQFPHECRPVAS*AVGSAV Trigger: CACTGCACTACCCACTGCTCATGAGGCCACAGGTCT...ACATTCATGTGGAAACTGAACAACACTCAATGATTCCTTGGTCAAGGATGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR CCA 90 bp | GTTGTGCCTGTATGTACATATGTGCCTAGTGATGCAGAGGCCGCAAAAAGATATGAGGCAGTAGATAACTaGGTTACACATGGGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VVPVCTYVPSDAEAAKRYEAVDN*VTHGSD Trigger: GTCACTCCCATGTGTAACCCAGTTATCTACTGCCTC...ATATCTTTTTGCGGCCTCTGCATCACTAGGCACATATGTACATACAGGCACAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR CAA 72 bp | AGGCTGGAGAGGTCTCACAGTGGTTATGAGCACTTGTaGATCTTGCAGAGAACTGGAGTTCAGTTATTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RLERSHSGYEHL*ILQRTGVQLLY Trigger: GTACAATAACTGAACTCCAGTTCTCTGCAAGATCAACAAGTGCTCATAACCACTGTGAGACCTCTCCAGCCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR CAA 72 bp | ATGAGGCTGGAGAGGTCTCACAGTGGTTATGAGCACTaGTTGATCTTGCAGAGAACTGGAGTTCAGTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: MRLERSHSGYEH*LILQRTGVQLL Trigger: CAATAACTGAACTCCAGTTCTCTGCAAGATCAACAAGTGCTCATAACCACTGTGAGACCTCTCCAGCCTCAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR TCA 90 bp | GGATACAGAAAATGTGGTACATTTGCACAATGGAGTACTACTCTGCTATTTAAAGGGTCATGCAGCCTGTaGATGGAACATGACAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GYRKCGTFAQWSTTLLFKGSCSL*MEHDRA Trigger: GGCCCTGTCATGTTCCATTCACAGGCTGCATGACCC...TTTAAATAGCAGAGTAGTACTCCATTGTGCAAATGTACCACATTTTCTGTATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR CCA 90 bp | ATGTATCTGGAGGATATCATCCTTAGTGAGGTAACCCAATCACAAAAGAAGTCACAAACTCCTGGACTCTaGTCACATTGCCCAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MYLEDIILSEVTQSQKKSQTPGL*SHCPTQ Trigger: TTGAGTTGGGCAATGTGACCAGAGTCCAGGAGTTTG...TGACTTCTTTTGTGATTGGGTTACCTCACTAAGGATGATATCCTCCAGATACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR CCA 90 bp | GGATACAGAAAATGTGGTACATTTGCACAATGGAGTACTACTCTGCTATTTAAAGAACTGTCCTACCAATaGCCACATAGGAGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GYRKCGTFAQWSTTLLFKELSYQ*PHRRPW Trigger: CCATGGCCTCCTATGTGGCCATTGGTAGGACAGTTC...TTTAAATAGCAGAGTAGTACTCCATTGTGCAAATGTACCACATTTTCTGTATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR TCA 90 bp | TTCATCTTGGTAGATTTTAACTTTGATGAGTATGAAGTGTCCCTCCTTGTCTTTGTAGTGTGGGCATGGTaGCTGACACATAGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FILVDFNFDEYEVSLLVFVVWAW*LTHSTS Trigger: AGATGTGCTATGTGTCAGTCACCATGCCCACACTAC...AAAGACAAGGAGGGACACTTCATACTCATCAAAGTTAAAATCTACCAAGATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR TCA 90 bp | ATTCATTCTGGTTTCACACACTTGACACAATGCTTAACCAACATTTTCCATCTTCAATGCATGCTGTTTTaGTCACTGAGACCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IHSGFTHLTQCLTNIFHLQCMLF*SLRPAA Trigger: GGCTGCTGGTCTCAGTGATCAAAACAGCATGCATTG...AAGATGGAAAATGTTGGTTAAGCATTGTGTCAAGTGTGTGAAACCAGAATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR TCA 90 bp | ATTCATTCTGGTTTCACACACTTGACACAATGCTTAACCAACATTTTCCATCTTGAGGATGACAATAGCTaGGATGAAGTCCACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IHSGFTHLTQCLTNIFHLEDDNS*DEVHQL Trigger: GAGCTGGTGGACTTCATCTCAGCTATTGTCATCCTC...AAGATGGAAAATGTTGGTTAAGCATTGTGTCAAGTGTGTGAAACCAGAATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR GCA 90 bp | GGATACAGAAAATGTGGTACATTTGCACAATGGAGTACTACTCTGCTATTTAAACAGCAGCTGATGGCATaGCTAGAACTGTCCTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: GYRKCGTFAQWSTTLLFKQQLMA*LELSYQ Trigger: TTGGTAGGACAGTTCTAGGCATGCCATCAGCTGCTG...TTTAAATAGCAGAGTAGTACTCCATTGTGCAAATGTACCACATTTTCTGTATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR CCA 90 bp | ATTTCATCCTTGACCAAGGAATCATTGAGTGTTGTTCAGTTTCCACATGAATGTAATAGGACAAACTCCTaGACTCTGGTCACATTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISSLTKESLSVVQFPHECNRTNS*TLVTLP Trigger: GGGCAATGTGACCAGAGTCCAGGAGTTTGTCCTATT...ACATTCATGTGGAAACTGAACAACACTCAATGATTCCTTGGTCAAGGATGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR CCA 90 bp | ATGTATCTGGAGGATATCATCCTTAGTGAGGTAACCCAATCACAAAAGAAGTCAATGAAGAAGAAAAGCTaGGTCATGCAGCCTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MYLEDIILSEVTQSQKKSMKKKS*VMQPVN Trigger: ATTCACAGGCTGCATGACCCAGCTTTTCTTCTTCAT...TGACTTCTTTTGTGATTGGGTTACCTCACTAAGGATGATATCCTCCAGATACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR CCA 90 bp | GGATACAGAAAATGTGGTACATTTGCACAATGGAGTACTACTCTGCTATTTAAACTGAAGACCAGCGCATaGTTCTGTGGAAAGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GYRKCGTFAQWSTTLLFKLKTSA*FCGKLI Trigger: AATCAGCTTTCCACAGAACCATGCGCTGGTCTTCAG...TTTAAATAGCAGAGTAGTACTCCATTGTGCAAATGTACCACATTTTCTGTATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR CAA 72 bp | TGGGTTTCCTGTAAGCCACAAAATGTTGGGTCCTGTTaGTGTAGCCAGTCTATTAGTCTATGTCTTTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: WVSCKPQNVGSC*CSQSISLCLLL Trigger: CAATAAAAGACATAGACTAATAGACTGGCTACACAAACAGGACCCAACATTTTGTGGCTTACAGGAAACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR CAA 72 bp | TTAGGAGTAGAGATACCACAGAAAACGACTCGCAATTaGTACAGGTATTTCTCTGGGAGTGATGAAATTACA | + |
|
Preference number: 4 (lower is better) Translates to: LGVEIPQKTTRN*YRYFSGSDEIT Trigger: TGTAATTTCATCACTCCCAGAGAAATACCTGTACAAATTGCGAGTCGTTTTCTGTGGTATCTCTACTCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR CAA 72 bp | CTCAACAGAAGAATGGATACAGAAAATGTGGTACATTaGCACAATGGAGTACTACTCTGCTATTTAAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LNRRMDTENVVH*HNGVLLCYLKQ Trigger: TTGTTTTAAATAGCAGAGTAGTACTCCATTGTGCAAATGTACCACATTTTCTGTATCCATTCTTCTGTTGAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| 3UTR CAA 72 bp | ACTTTGATGAGTATGAAGTGTCCCTCCTTGTCTTTTTaGATAACTTTGGGTTGGAAGTCAATTTTATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLMSMKCPSLSF*ITLGWKSILFH Trigger: ATGGAATAAAATTGACTTCCAACCCAAAGTTATCAAAAAAGACAAGGAGGGACACTTCATACTCATCAAAGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS TCA 90 bp | GGACATTGGGGCCACAATAGGACAGGCTTGCAATGCATGCTGTTTTaGTCACTGAGACCAGCAGCCCACCTAGCCATGAAGACAAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GHWGHNRTGLQCMLF*SLRPAAHLAMKTRL Trigger: TAGCCTTGTCTTCATGGCTAGGTGGGCTGCTGGTCTCAGTGATCAAAACAGCATGCATTGCAAGCCTGTCCTATTGTGGCCCCAATGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056120.5 ENSMUST00000214301.3 |
||
| CDS-3UTR CAA 90 bp | GTTGTGCCTGTATGTACATATGTGCCTAGTGATGCAGAGGCCGCAAAAAGATATGCAATGCATGCTGTTTaGATCACTGAGACCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVPVCTYVPSDAEAAKRYAMHAV*ITETSS Trigger: GCTGCTGGTCTCAGTGATCAAAACAGCATGCATTGC...ATATCTTTTTGCGGCCTCTGCATCACTAGGCACATATGTACATACAGGCACAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS-3UTR CAA 90 bp | ATGTATCTGGAGGATATCATCCTTAGTGAGGTAACCCAATCACAAAAGAAGTCAATGACAGACAGCACCTaGTTAAGGTCCATGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MYLEDIILSEVTQSQKKSMTDST*LRSMAS Trigger: AGAAGCCATGGACCTTAACAAGGTGCTGTCTGTCAT...TGACTTCTTTTGTGATTGGGTTACCTCACTAAGGATGATATCCTCCAGATACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214301.3 |
||
| CDS TCA 72 bp | GGCCACAATAGGACAGGCTTGCAATGCATGCTGTTTTaGTCACTGAGACCAGCAGCCCACCTAGCCATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GHNRTGLQCMLF*SLRPAAHLAMK Trigger: CTTCATGGCTAGGTGGGCTGCTGGTCTCAGTGATCAAAACAGCATGCATTGCAAGCCTGTCCTATTGTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056120.5 ENSMUST00000214301.3 |
||
| CDS CCA 72 bp | GCTGAGATGAAGTCCACCAGCTCTGTGAGGGCCACATaGGTGCAGGACAAGTTAAGAAGAGGAGAGACATCA | + |
|
Preference number: 6 (lower is better) Translates to: AEMKSTSSVRAT*VQDKLRRGETS Trigger: TGATGTCTCTCCTCTTCTTAACTTGTCCTGCACCCATGTGGCCCTCACAGAGCTGGTGGACTTCATCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056120.5 ENSMUST00000214301.3 |
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