Pregenerated sensors for OLFR1335 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000066061

Ensembl transcript IDs: ENSMUST00000084313.5, ENSMUST00000219094.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AAACACTCAAGACCAAGTCCACCATCTCTACAAAGTGAGTATCCATaGAAGCCAAGCTACGCACTGAAGGACCTTCACACAAGTAGTGGT	+
Preference number: 5 (lower is better) Translates to: KHSRPSPPSLQSEYP*KPSYALKDLHTSSG Trigger: ACCACTACTTGTGTGAAGGTCCTTCAGTGCGTAGCTTGGCTTGCATGGATACTCACTTTGTAGAGATGGTGGACTTGGTCTTGAGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084313.5 ENSMUST00000219094.2
CDS TCA 72 bp	AGCTACGCACTGAAGGACCTTCACACAAGTAGTGGTTaGCCCTGTTGGGCCCACAATATGGCAGACTCATGG	+
Preference number: 6 (lower is better) Translates to: SYALKDLHTSSG*PCWAHNMADSW Trigger: CCATGAGTCTGCCATATTGTGGGCCCAACAGGGTCAACCACTACTTGTGTGAAGGTCCTTCAGTGCGTAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084313.5 ENSMUST00000219094.2
CDS GCA 72 bp	AGACCAAGTCCACCATCTCTACAAAGTGAGTATCCATaGAAGCCAAGCTACGCACTGAAGGACCTTCACACA	+
Preference number: 6 (lower is better) Translates to: RPSPPSLQSEYP*KPSYALKDLHT Trigger: TGTGTGAAGGTCCTTCAGTGCGTAGCTTGGCTTGCATGGATACTCACTTTGTAGAGATGGTGGACTTGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084313.5 ENSMUST00000219094.2
CDS GCA 72 bp	CTTGCAGCGCCCCTGGGTGGACTTAATCTTGAGAATTaGCTTGGCAATATGAATGTAGGAAGCCACAATGAG	+
Preference number: 6 (lower is better) Translates to: LAAPLGGLNLEN*LGNMNVGSHNE Trigger: CTCATTGTGGCTTCCTACATTCATATTGCCAAGGCAATTCTCAAGATTAAGTCCACCCAGGGGCGCTGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084313.5 ENSMUST00000219094.2
CDS TCA 72 bp	TACAAAGTGAGTATCCATGCAAGCCAAGCTACGCACTaGAGGACCTTCACACAAGTAGTGGTTGACCCTGTT	+
Preference number: 6 (lower is better) Translates to: YKVSIHASQATH*RTFTQVVVDPV Trigger: AACAGGGTCAACCACTACTTGTGTGAAGGTCCTTCAGTGCGTAGCTTGGCTTGCATGGATACTCACTTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084313.5 ENSMUST00000219094.2
CDS CCA 72 bp	GAGAAGCCAAGCAGGATGAACTCAGAAACCCAACTTTaGTTTTGTCCTGACATCCTCCACATGGTAGAGACT	+
Preference number: 6 (lower is better) Translates to: EKPSRMNSETQL*FCPDILHMVET Trigger: AGTCTCTACCATGTGGAGGATGTCAGGACAAAACCAAAGTTGGGTTTCTGAGTTCATCCTGCTTGGCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219094.2

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