Pregenerated sensors for OLFR1331 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073769Ensembl transcript IDs: ENSMUST00000094831.2, ENSMUST00000106360.3, ENSMUST00000216589.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGAGAACCTGTGCTGCATTACTTAGCCTACAGCACATCAGCCTCTaGTGTGTCTATTACAGCATCACTAATGACATGTTTCCTGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: MRTCAALLSLQHISL*CVYYSITNDMFPAG Trigger: GCCAGCAGGAAACATGTCATTAGTGATGCTGTAATAGACACAGCAGAGGCTGATGTGCTGTAGGCTAAGTAATGCAGCACAGGTTCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CCA 90 bp | TCATCATGTTGGACCACAGACTCCATTGGATTTAGGCAGGAAGTTTaGTCTCTTGTCTGCACCCCTTCTGTTCCACACACCATTGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: SSCWTTDSIGFRQEV*SLVCTPSVPHTIAL Trigger: TAAAGCAATGGTGTGTGGAACAGAAGGGGTGCAGACAAGAGACCAAACTTCCTGCCTAAATCCAATGGAGTCTGTGGTCCAACATGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR TCA 90 bp | ATCCACTATTCCTTTGCTTCTGTTAATGATGGATGGATCTCAGCCTaGCTACACAAGGAGACTTGCAATCTACCACTAATGAAAGTGAGC | + |
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Preference number: 1 (lower is better) Translates to: IHYSFASVNDGWISA*LHKETCNLPLMKVS Trigger: GCTCACTTTCATTAGTGGTAGATTGCAAGTCTCCTTGTGTAGTCAGGCTGAGATCCATCCATCATTAACAGAAGCAAAGGAATAGTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR GCA 90 bp | AGCATCACTAATGACATGTTTCCTGCTGGCTTACATGTATGCAGTTaGCAGTCAGAAAATACGGCAGGTTGCAAAACTGCTGCTAATTTT | + |
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Preference number: 1 (lower is better) Translates to: SITNDMFPAGLHVCS*QSENTAGCKTAANF Trigger: AAAATTAGCAGCAGTTTTGCAACCTGCCGTATTTTCTGACTGGCAACTGCATACATGTAAGCCAGCAGGAAACATGTCATTAGTGATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR GCA 90 bp | ACCACAGACTCCATTGGATTTAGGCAGGAAGTTTGGTCTCTTGTCTaGACCCCTTCTGTTCCACACACCATTGCTTTAATTTTAATAATG | + |
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Preference number: 1 (lower is better) Translates to: TTDSIGFRQEVWSLV*TPSVPHTIALILIM Trigger: CATTATTAAAATTAAAGCAATGGTGTGTGGAACAGAAGGGGTGCAGACAAGAGACCAAACTTCCTGCCTAAATCCAATGGAGTCTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGGACCAAGATCAGCAGTCACAGGGGAGACGTGTCCTCGGATGCTGCATGGGATGGATCTCAGCCTaGCTACACAAGGAGACTTGC | + |
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Preference number: 2 (lower is better) Translates to: EKDQDQQSQGRRVLGCCMGWISA*LHKETC Trigger: GCAAGTCTCCTTGTGTAGTCAGGCTGAGATCCATCC...CATGCAGCATCCGAGGACACGTCTCCCCTGTGACTGCTGATCTTGGTCCTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAAGGACCAAGATCAGCAGTCACAGGGGAGACGTGTCCTCGGATGCTGCATGCCTATCAATACAGCATaGTGTCTTTCAGGAATGTTG | + |
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Preference number: 2 (lower is better) Translates to: EKDQDQQSQGRRVLGCCMPINTA*CLSGML Trigger: CAACATTCCTGAAAGACAGCATGCTGTATTGATAGG...CATGCAGCATCCGAGGACACGTCTCCCCTGTGACTGCTGATCTTGGTCCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR GCA 90 bp | AGACGTGTCCTCGGATGCTGCATGTCACCTGCAGCAATAATTGGGACTTCTGCCTTACATGTATGCAGTTaGCAGTCAGAAAATACGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RRVLGCCMSPAAIIGTSALHVCS*QSENTA Trigger: TGCCGTATTTTCTGACTGGCAACTGCATACATGTAA...GGCAGAAGTCCCAATTATTGCTGCAGGTGACATGCAGCATCCGAGGACACGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR GCA 90 bp | GACAATGGATATCCACACACAAAAGCATTAAATTGGACCCTGGCCACATACTGTCGTGTCCTCGGATGCTaGATGTCACCTGCAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: DNGYPHTKALNWTLATYCRVLGC*MSPAAI Trigger: TATTGCTGCAGGTGACATGCAGCATCCGAGGACACG...ACAGTATGTGGCCAGGGTCCAATTTAATGCTTTTGTGTGTGGATATCCATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR TCA 90 bp | CTAATGACATGTTTCCTGCTGGCTTACATGTATGCAGTTGCCAGTCAGAAAATAGGATGGATCTCAGCCTaGCTACACAAGGAGACTTGC | + |
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Preference number: 2 (lower is better) Translates to: LMTCFLLAYMYAVASQKIGWISA*LHKETC Trigger: GCAAGTCTCCTTGTGTAGTCAGGCTGAGATCCATCC...TATTTTCTGACTGGCAACTGCATACATGTAAGCCAGCAGGAAACATGTCATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CAA 90 bp | GCTCTCCTTGCCAGAATAATGCGTGCACAGATGTGGGGATCACTATaGAGAAGCTTAGGTTTAAAGGCTGTATCCACTATTCCTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: ALLARIMRAQMWGSL*RSLGLKAVSTIPLL Trigger: AAGCAAAGGAATAGTGGATACAGCCTTTAAACCTAAGCTTCTCAATAGTGATCCCCACATCTGTGCACGCATTATTCTGGCAAGGAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR GCA 90 bp | GATTTAGGCAGGAAGTTTGGTCTCTTGTCTGCACCCCTTCTGTTCCACACACCACTACACAAGGAGACTTaGAATCTACCACTAATGAAA | + |
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Preference number: 2 (lower is better) Translates to: DLGRKFGLLSAPLLFHTPLHKET*NLPLMK Trigger: TTTCATTAGTGGTAGATTGCAAGTCTCCTTGTGTAG...TGGTGTGTGGAACAGAAGGGGTGCAGACAAGAGACCAAACTTCCTGCCTAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAAATATCACGCAATGAGACAAGGACTGTTGTCAAAGGGCAGTGATGAGACACAGCACATCAGCCTCTaGTGTGTCTATTACAGCATC | + |
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Preference number: 2 (lower is better) Translates to: CKYHAMRQGLLSKGSDETQHISL*CVYYSI Trigger: GATGCTGTAATAGACACAGCAGAGGCTGATGTGCTG...TGTCTCATCACTGCCCTTTGACAACAGTCCTTGTCTCATTGCGTGATATTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGGAGACTCAAGATTATTTTTAGGTACATTGAAAGTTTGAAGCCAGTACGGCGTGTCCTCGGATGCTaGATGTCACCTGCAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: HRRLKIIFRYIESLKPVRRVLGC*MSPAAI Trigger: TATTGCTGCAGGTGACATGCAGCATCCGAGGACACG...CCGTACTGGCTTCAAACTTTCAATGTACCTAAAAATAATCTTGAGTCTCCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGGAGACTCAAGATTATTTTTAGGTACATTGAAAGTTTGAAGCCAGTACGGTGTCAGGTTGGACCATaGTGCTCTCCTTGCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: HRRLKIIFRYIESLKPVRCQVGP*CSPCQN Trigger: ATTCTGGCAAGGAGAGCATCATGGTCCAACCTGACA...CCGTACTGGCTTCAAACTTTCAATGTACCTAAAAATAATCTTGAGTCTCCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAGGTCTTGTGTCATAAGCACAAAATCACAGTAATGGGAGGTGGACACAGGTCACATGACTTTCATTaGTTCTCTGTGGAAGTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HQVLCHKHKITVMGGGHRSHDFH*FSVEVK Trigger: CTTTACTTCCACAGAGAAGCAATGAAAGTCATGTGA...CCTGTGTCCACCTCCCATTACTGTGATTTTGTGCTTATGACACAAGACCTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR CCA 90 bp | GACAATGGATATCCACACACAAAAGCATTAAATTGGACCCTGGCCACATACTGTATCTTGTTGTCAGGTTaGACCATGATGCTCTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: DNGYPHTKALNWTLATYCILLSG*TMMLSL Trigger: CAAGGAGAGCATCATGGTCCAACCTGACAACAAGAT...ACAGTATGTGGCCAGGGTCCAATTTAATGCTTTTGTGTGTGGATATCCATTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGGACCCTGGCCACATACTGTGCACAAAATGAATCAAAATGCAAATGAAACTCTGATAGGAAAAGGATaGACACCACCTCCGTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: IGPWPHTVHKMNQNANETLIGKG*TPPPCR Trigger: TCTACACGGAGGTGGTGTGCATCCTTTTCCTATCAG...AGTTTCATTTGCATTTTGATTCATTTTGTGCACAGTATGTGGCCAGGGTCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CAA 90 bp | AGTGATACTAAGGACATTGTCTACAAACCAAAATATCACCAGGTCTaGTGTCATAAGCACAAAATCACAGTAATGGGAGGTGGACACAGG | + |
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Preference number: 2 (lower is better) Translates to: SDTKDIVYKPKYHQV*CHKHKITVMGGGHR Trigger: CCTGTGTCCACCTCCCATTACTGTGATTTTGTGCTTATGACACAAGACCTGGTGATATTTTGGTTTGTAGACAATGTCCTTAGTATCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR GCA 90 bp | GACAATGGATATCCACACACAAAAGCATTAAATTGGACCCTGGCCACATACTGTTTACATGTATGCAGTTaGCAGTCAGAAAATACGGCA | + |
|
Preference number: 2 (lower is better) Translates to: DNGYPHTKALNWTLATYCLHVCS*QSENTA Trigger: TGCCGTATTTTCTGACTGGCAACTGCATACATGTAA...ACAGTATGTGGCCAGGGTCCAATTTAATGCTTTTGTGTGTGGATATCCATTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAAATATCACGCAATGAGACAAGGACTGTTGTCAAAGGGCAGTGATGAGACAACAAAAGCATTAAATTaGACCCTGGCCACATACTGT | + |
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Preference number: 2 (lower is better) Translates to: CKYHAMRQGLLSKGSDETTKALN*TLATYC Trigger: ACAGTATGTGGCCAGGGTCCAATTTAATGCTTTTGT...TGTCTCATCACTGCCCTTTGACAACAGTCCTTGTCTCATTGCGTGATATTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CAA 90 bp | ACTGTATCTGACACACCAGACCTTGTAATGACACACACAAGAGAGTaGTTGACAACCATGATGATTAAGCAATTAAGAGTTGTAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: TVSDTPDLVMTHTRE*LTTMMIKQLRVVRP Trigger: AGGCCTTACAACTCTTAATTGCTTAATCATCATGGTTGTCAACAACTCTCTTGTGTGTGTCATTACAAGGTCTGGTGTGTCAGATACAGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAAATATCACGCAATGAGACAAGGACTGTTGTCAAAGGGCAGTGATGAGACATCACATGACTTTCATTaGTTCTCTGTGGAAGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: CKYHAMRQGLLSKGSDETSHDFH*FSVEVK Trigger: CTTTACTTCCACAGAGAAGCAATGAAAGTCATGTGA...TGTCTCATCACTGCCCTTTGACAACAGTCCTTGTCTCATTGCGTGATATTTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CAA 90 bp | GTATCTGACACACCAGACCTTGTAATGACACACACAAGAGAGTTGTaGACAACCATGATGATTAAGCAATTAAGAGTTGTAAGGCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: VSDTPDLVMTHTREL*TTMMIKQLRVVRPF Trigger: AAAAGGCCTTACAACTCTTAATTGCTTAATCATCATGGTTGTCAACAACTCTCTTGTGTGTGTCATTACAAGGTCTGGTGTGTCAGATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGGAGACTCAAGATTATTTTTAGGTACATTGAAAGTTTGAAGCCAGTACGGCCTATCAATACAGCATaGTGTCTTTCAGGAATGTTG | + |
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Preference number: 2 (lower is better) Translates to: HRRLKIIFRYIESLKPVRPINTA*CLSGML Trigger: CAACATTCCTGAAAGACAGCATGCTGTATTGATAGG...CCGTACTGGCTTCAAACTTTCAATGTACCTAAAAATAATCTTGAGTCTCCTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR GCA 72 bp | CAAGATCAGCAGTCACAGGGGAGACGTGTCCTCGGATaGTGCATGTCACCTGCAGCAATAATTGGGACTTCT | + |
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Preference number: 3 (lower is better) Translates to: QDQQSQGRRVLG*CMSPAAIIGTS Trigger: AGAAGTCCCAATTATTGCTGCAGGTGACATGCAGCATCCGAGGACACGTCTCCCCTGTGACTGCTGATCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR CAA 90 bp | AGACGTGTCCTCGGATGCTGCATGTCACCTGCAGCAATAATTGGGACTTCTGCCGCAGACTTCATCATGTaGGACCACAGACTCCATTGG | + |
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Preference number: 3 (lower is better) Translates to: RRVLGCCMSPAAIIGTSAADFIM*DHRLHW Trigger: CCAATGGAGTCTGTGGTCCAACATGATGAAGTCTGC...GGCAGAAGTCCCAATTATTGCTGCAGGTGACATGCAGCATCCGAGGACACGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CCA 72 bp | TGGACCACAGACTCCATTGGATTTAGGCAGGAAGTTTaGTCTCTTGTCTGCACCCCTTCTGTTCCACACACC | + |
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Preference number: 3 (lower is better) Translates to: WTTDSIGFRQEV*SLVCTPSVPHT Trigger: GGTGTGTGGAACAGAAGGGGTGCAGACAAGAGACCAAACTTCCTGCCTAAATCCAATGGAGTCTGTGGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR CAA 90 bp | TGTAAATATCACGCAATGAGACAAGGACTGTTGTCAAAGGGCAGTGATGAGACAAGGTACATTGAAAGTTaGAAGCCAGTACGGGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: CKYHAMRQGLLSKGSDETRYIES*KPVREG Trigger: CCCTTCCCGTACTGGCTTCAAACTTTCAATGTACCT...TGTCTCATCACTGCCCTTTGACAACAGTCCTTGTCTCATTGCGTGATATTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR GCA 72 bp | TCCATTGGATTTAGGCAGGAAGTTTGGTCTCTTGTCTaGACCCCTTCTGTTCCACACACCATTGCTTTAATT | + |
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Preference number: 3 (lower is better) Translates to: SIGFRQEVWSLV*TPSVPHTIALI Trigger: AATTAAAGCAATGGTGTGTGGAACAGAAGGGGTGCAGACAAGAGACCAAACTTCCTGCCTAAATCCAATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR TCA 72 bp | TCCTTTGCTTCTGTTAATGATGGATGGATCTCAGCCTaGCTACACAAGGAGACTTGCAATCTACCACTAATG | + |
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Preference number: 3 (lower is better) Translates to: SFASVNDGWISA*LHKETCNLPLM Trigger: CATTAGTGGTAGATTGCAAGTCTCCTTGTGTAGTCAGGCTGAGATCCATCCATCATTAACAGAAGCAAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR GCA 72 bp | ATCACTAATGACATGTTTCCTGCTGGCTTACATGTATaGAGTTGCCAGTCAGAAAATACGGCAGGTTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: ITNDMFPAGLHV*SCQSENTAGCK Trigger: TTTGCAACCTGCCGTATTTTCTGACTGGCAACTGCATACATGTAAGCCAGCAGGAAACATGTCATTAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR GCA 72 bp | TGTGCTGCATTACTTAGCCTACAGCACATCAGCCTCTaGTGTGTCTATTACAGCATCACTAATGACATGTTT | + |
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Preference number: 3 (lower is better) Translates to: CAALLSLQHISL*CVYYSITNDMF Trigger: AAACATGTCATTAGTGATGCTGTAATAGACACAGCAGAGGCTGATGTGCTGTAGGCTAAGTAATGCAGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CCA 72 bp | GACAAGGACTGTTGTCAAAGGGCAGTGATGAGACAATaGATATCCACACACAAAAGCATTAAATTGGACCCT | + |
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Preference number: 3 (lower is better) Translates to: DKDCCQRAVMRQ*ISTHKSIKLDP Trigger: AGGGTCCAATTTAATGCTTTTGTGTGTGGATATCCATTGTCTCATCACTGCCCTTTGACAACAGTCCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR CAA 90 bp | CACAGGAGACTCAAGATTATTTTTAGGTACATTGAAAGTTTGAAGCCAGTACGGGCCCCAAGGGAGTCTTaGCATGCAGAATCAGTAATA | + |
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Preference number: 3 (lower is better) Translates to: HRRLKIIFRYIESLKPVRAPRES*HAESVI Trigger: TATTACTGATTCTGCATGCAAAGACTCCCTTGGGGC...CCGTACTGGCTTCAAACTTTCAATGTACCTAAAAATAATCTTGAGTCTCCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGGACCCTGGCCACATACTGTGCACAAAATGAATCAAAATGCAAATGAAACTACTACACAAGGAGACTaGCAATCTACCACTAATGAA | + |
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Preference number: 3 (lower is better) Translates to: IGPWPHTVHKMNQNANETTTQGD*QSTTNE Trigger: TTCATTAGTGGTAGATTGCAAGTCTCCTTGTGTAGT...AGTTTCATTTGCATTTTGATTCATTTTGTGCACAGTATGTGGCCAGGGTCCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR TCA 72 bp | ACTATGAATGGATTGTCTTCACTGTCACCCCAAACATaGTTGCAAACAAATTATAAGCAGGGCATCATTAGG | + |
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Preference number: 3 (lower is better) Translates to: TMNGLSSLSPQT*LQTNYKQGIIR Trigger: CCTAATGATGCCCTGCTTATAATTTGTTTGCAATCATGTTTGGGGTGACAGTGAAGACAATCCATTCATAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR TCA 72 bp | ACTTTCATCAGGAAATGCCTTCTGGAATATATCCCATaGGACAGAGATAAAGTGGCTGAGTTGTATTTAACC | + |
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Preference number: 3 (lower is better) Translates to: TFIRKCLLEYIP*DRDKVAELYLT Trigger: GGTTAAATACAACTCAGCCACTTTATCTCTGTCTCATGGGATATATTCCAGAAGGCATTTCCTGATGAAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CCA 72 bp | CATAAACCCACAAACATAATAAATCCTAACTATGAATaGATTGTCTTCACTGTCACCCCAAACATGATTGCA | + |
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Preference number: 3 (lower is better) Translates to: HKPTNIINPNYE*IVFTVTPNMIA Trigger: TGCAATCATGTTTGGGGTGACAGTGAAGACAATCCATTCATAGTTAGGATTTATTATGTTTGTGGGTTTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR CCA 90 bp | GTCCTCGGATGCTGCATGTCACCTGCAGCAATAATTGGGACTTCTGCCATGAAAGGATGCTGTTGGTCGTaGGGTCACTGGAGAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: VLGCCMSPAAIIGTSAMKGCCWS*GHWRSQ Trigger: TTGGCTTCTCCAGTGACCCCACGACCAACAGCATCC...TTTCATGGCAGAAGTCCCAATTATTGCTGCAGGTGACATGCAGCATCCGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | CACCAGGTCTTGTGTCATAAGCACAAAATCACAGTAATGGGAGGTGGACACAGGCCCATTGCCCAGGACTaGGCTCAGGTAGATGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: HQVLCHKHKITVMGGGHRPIAQD*AQVDEK Trigger: CTTCTCATCTACCTGAGCTCAGTCCTGGGCAATGGG...CCTGTGTCCACCTCCCATTACTGTGATTTTGTGCTTATGACACAAGACCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | GATTTAGGCAGGAAGTTTGGTCTCTTGTCTGCACCCCTTCTGTTCCACACACCACACACAAGTAGTGGTTaGCCCTGTTGGGCCCACAAT | + |
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Preference number: 4 (lower is better) Translates to: DLGRKFGLLSAPLLFHTPHTSSG*PCWAHN Trigger: ATTGTGGGCCCAACAGGGTCAACCACTACTTGTGTG...TGGTGTGTGGAACAGAAGGGGTGCAGACAAGAGACCAAACTTCCTGCCTAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR CCA 90 bp | AGACGTGTCCTCGGATGCTGCATGTCACCTGCAGCAATAATTGGGACTTCTGCCGGGAGTAACTGGAGTTaGGCCTCAAGTAAGTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: RRVLGCCMSPAAIIGTSAGSNWS*ASSKCK Trigger: CTTACACTTACTTGAGGCCCAACTCCAGTTACTCCC...GGCAGAAGTCCCAATTATTGCTGCAGGTGACATGCAGCATCCGAGGACACGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | GAAAAGGACCAAGATCAGCAGTCACAGGGGAGACGTGTCCTCGGATGCTGCATGAGAAGCCAATCAGGATaGACTCAGAAACCCAACTTT | + |
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Preference number: 4 (lower is better) Translates to: EKDQDQQSQGRRVLGCCMRSQSG*TQKPNF Trigger: AAAGTTGGGTTTCTGAGTTCATCCTGATTGGCTTCT...CATGCAGCATCCGAGGACACGTCTCCCCTGTGACTGCTGATCTTGGTCCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR CCA 90 bp | GATTTAGGCAGGAAGTTTGGTCTCTTGTCTGCACCCCTTCTGTTCCACACACCATCTCAGGGGAGTAACTaGAGTTGGGCCTCAAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: DLGRKFGLLSAPLLFHTPSQGSN*SWASSK Trigger: CTTACTTGAGGCCCAACTCCAGTTACTCCCCTGAGA...TGGTGTGTGGAACAGAAGGGGTGCAGACAAGAGACCAAACTTCCTGCCTAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | GAGACGTGTCCTCGGATGCTGCATGTCACCTGCAGCAATAATTGGGACTTCTGCAGAAGCCAATCAGGATaGACTCAGAAACCCAACTTT | + |
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Preference number: 4 (lower is better) Translates to: ETCPRMLHVTCSNNWDFCRSQSG*TQKPNF Trigger: AAAGTTGGGTTTCTGAGTTCATCCTGATTGGCTTCT...GCAGAAGTCCCAATTATTGCTGCAGGTGACATGCAGCATCCGAGGACACGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR CCA 90 bp | GTCCTCGGATGCTGCATGTCACCTGCAGCAATAATTGGGACTTCTGCCATGAAAGGGAGTAACTGGAGTTaGGCCTCAAGTAAGTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: VLGCCMSPAAIIGTSAMKGSNWS*ASSKCK Trigger: CTTACACTTACTTGAGGCCCAACTCCAGTTACTCCC...TTTCATGGCAGAAGTCCCAATTATTGCTGCAGGTGACATGCAGCATCCGAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CAA 72 bp | CAGACTCCATTGGATTTAGGCAGGAAGTTTGGTCTCTaGTCTGCACCCCTTCTGTTCCACACACCATTGCTT | + |
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Preference number: 4 (lower is better) Translates to: QTPLDLGRKFGL*SAPLLFHTPLL Trigger: AAGCAATGGTGTGTGGAACAGAAGGGGTGCAGACAAGAGACCAAACTTCCTGCCTAAATCCAATGGAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | CACCAGGTCTTGTGTCATAAGCACAAAATCACAGTAATGGGAGGTGGACACAGGAGTCCACCATCTCAATaGTGTGGGTATCCATGCAAG | + |
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Preference number: 4 (lower is better) Translates to: HQVLCHKHKITVMGGGHRSPPSQ*CGYPCK Trigger: CTTGCATGGATACCCACATCATTGAGATGGTGGACT...CCTGTGTCCACCTCCCATTACTGTGATTTTGTGCTTATGACACAAGACCTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR CCA 90 bp | CTAATGACATGTTTCCTGCTGGCTTACATGTATGCAGTTGCCAGTCAGAAAATAGGATGCTGTTGGTCGTaGGGTCACTGGAGAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LMTCFLLAYMYAVASQKIGCCWS*GHWRSQ Trigger: TTGGCTTCTCCAGTGACCCCACGACCAACAGCATCC...TATTTTCTGACTGGCAACTGCATACATGTAAGCCAGCAGGAAACATGTCATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR CCA 90 bp | CACCAGGTCTTGTGTCATAAGCACAAAATCACAGTAATGGGAGGTGGACACAGGACCATCTCAATGATGTaGGTATCCATGCAAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: HQVLCHKHKITVMGGGHRTISMM*VSMQAK Trigger: CTTGGCTTGCATGGATACCCACATCATTGAGATGGT...CCTGTGTCCACCTCCCATTACTGTGATTTTGTGCTTATGACACAAGACCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | AGTCACCTATCAATACAGCATGCTGTCTTTCAGGAATGTTGTCCTAAGTTATATCCCATTGCCCAGGACTaGGCTCAGGTAGATGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SHLSIQHAVFQECCPKLYPIAQD*AQVDEK Trigger: CTTCTCATCTACCTGAGCTCAGTCCTGGGCAATGGG...ATATAACTTAGGACAACATTCCTGAAAGACAGCATGCTGTATTGATAGGTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | CACAGGAGACTCAAGATTATTTTTAGGTACATTGAAAGTTTGAAGCCAGTACGGCACACAAGTAGTGGTTaGCCCTGTTGGGCCCACAAT | + |
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Preference number: 4 (lower is better) Translates to: HRRLKIIFRYIESLKPVRHTSSG*PCWAHN Trigger: ATTGTGGGCCCAACAGGGTCAACCACTACTTGTGTG...CCGTACTGGCTTCAAACTTTCAATGTACCTAAAAATAATCTTGAGTCTCCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | ATAATGCAGACTTCATCATGTTGGACCACAGACTCCATTGGATTTAGGCAGGAAAGTCCACCATCTCAATaGTGTGGGTATCCATGCAAG | + |
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Preference number: 4 (lower is better) Translates to: IMQTSSCWTTDSIGFRQESPPSQ*CGYPCK Trigger: CTTGCATGGATACCCACATCATTGAGATGGTGGACT...TTCCTGCCTAAATCCAATGGAGTCTGTGGTCCAACATGATGAAGTCTGCATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR GCA 90 bp | TGTAAATATCACGCAATGAGACAAGGACTGTTGTCAAAGGGCAGTGATGAGACACCGAACATAAACATCTaGAGCCAGCAGCCAGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: CKYHAMRQGLLSKGSDETPNINI*SQQPVK Trigger: CTTTACTGGCTGCTGGCTGCAGATGTTTATGTTCGG...TGTCTCATCACTGCCCTTTGACAACAGTCCTTGTCTCATTGCGTGATATTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | ATTGGACCCTGGCCACATACTGTGCACAAAATGAATCAAAATGCAAATGAAACTAGCCAAGCTACGCACTaGAGGACCTTCACACAAGTA | + |
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Preference number: 4 (lower is better) Translates to: IGPWPHTVHKMNQNANETSQATH*RTFTQV Trigger: TACTTGTGTGAAGGTCCTTCAGTGCGTAGCTTGGCT...AGTTTCATTTGCATTTTGATTCATTTTGTGCACAGTATGTGGCCAGGGTCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | ATAATGCAGACTTCATCATGTTGGACCACAGACTCCATTGGATTTAGGCAGGAAAGCACTGTAAAAGAGTaGGATCTGCTTGTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: IMQTSSCWTTDSIGFRQESTVKE*DLLVSL Trigger: GAGAGAGACAAGCAGATCTCACTCTTTTACAGTGCT...TTCCTGCCTAAATCCAATGGAGTCTGTGGTCCAACATGATGAAGTCTGCATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR GCA 90 bp | CTAATGACATGTTTCCTGCTGGCTTACATGTATGCAGTTGCCAGTCAGAAAATAACAAATACAAGACCCTaGTGCCAACCGTATGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LMTCFLLAYMYAVASQKITNTRP*CQPYAE Trigger: CTCTGCATACGGTTGGCAGCAGGGTCTTGTATTTGT...TATTTTCTGACTGGCAACTGCATACATGTAAGCCAGCAGGAAACATGTCATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR CCA 90 bp | CACAGGAGACTCAAGATTATTTTTAGGTACATTGAAAGTTTGAAGCCAGTACGGTCTCAGGGGAGTAACTaGAGTTGGGCCTCAAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: HRRLKIIFRYIESLKPVRSQGSN*SWASSK Trigger: CTTACTTGAGGCCCAACTCCAGTTACTCCCCTGAGA...CCGTACTGGCTTCAAACTTTCAATGTACCTAAAAATAATCTTGAGTCTCCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | GACAATGGATATCCACACACAAAAGCATTAAATTGGACCCTGGCCACATACTGTATGGCAGACTCATGGTaGAGAAAGTGTGCAATAAAG | + |
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Preference number: 4 (lower is better) Translates to: DNGYPHTKALNWTLATYCMADSW*RKCAIK Trigger: CTTTATTGCACACTTTCTTCACCATGAGTCTGCCAT...ACAGTATGTGGCCAGGGTCCAATTTAATGCTTTTGTGTGTGGATATCCATTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | CTAATGACATGTTTCCTGCTGGCTTACATGTATGCAGTTGCCAGTCAGAAAATAAGCACTGTAAAAGAGTaGGATCTGCTTGTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LMTCFLLAYMYAVASQKISTVKE*DLLVSL Trigger: GAGAGAGACAAGCAGATCTCACTCTTTTACAGTGCT...TATTTTCTGACTGGCAACTGCATACATGTAAGCCAGCAGGAAACATGTCATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR GCA 90 bp | ATTGGACCCTGGCCACATACTGTGCACAAAATGAATCAAAATGCAAATGAAACTCCGAACATAAACATCTaGAGCCAGCAGCCAGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: IGPWPHTVHKMNQNANETPNINI*SQQPVK Trigger: CTTTACTGGCTGCTGGCTGCAGATGTTTATGTTCGG...AGTTTCATTTGCATTTTGATTCATTTTGTGCACAGTATGTGGCCAGGGTCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR GCA 90 bp | ATTGGACCCTGGCCACATACTGTGCACAAAATGAATCAAAATGCAAATGAAACTACAAATACAAGACCCTaGTGCCAACCGTATGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: IGPWPHTVHKMNQNANETTNTRP*CQPYAE Trigger: CTCTGCATACGGTTGGCAGCAGGGTCTTGTATTTGT...AGTTTCATTTGCATTTTGATTCATTTTGTGCACAGTATGTGGCCAGGGTCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | CTAATGACATGTTTCCTGCTGGCTTACATGTATGCAGTTGCCAGTCAGAAAATAATGGCAGACTCATGGTaGAGAAAGTGTGCAATAAAG | + |
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Preference number: 4 (lower is better) Translates to: LMTCFLLAYMYAVASQKIMADSW*RKCAIK Trigger: CTTTATTGCACACTTTCTTCACCATGAGTCTGCCAT...TATTTTCTGACTGGCAACTGCATACATGTAAGCCAGCAGGAAACATGTCATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR TCA 90 bp | AGTCACCTATCAATACAGCATGCTGTCTTTCAGGAATGTTGTCCTAAGTTATATAACGATCATAAGCCATaGCAACAAAGAAGGTGCACT | + |
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Preference number: 4 (lower is better) Translates to: SHLSIQHAVFQECCPKLYNDHKP*QQRRCT Trigger: AGTGCACCTTCTTTGTTGTCATGGCTTATGATCGTT...ATATAACTTAGGACAACATTCCTGAAAGACAGCATGCTGTATTGATAGGTGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CAA 72 bp | AAGGACATTGTCTACAAACCAAAATATCACCAGGTCTaGTGTCATAAGCACAAAATCACAGTAATGGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: KDIVYKPKYHQV*CHKHKITVMGG Trigger: ACCTCCCATTACTGTGATTTTGTGCTTATGACACAAGACCTGGTGATATTTTGGTTTGTAGACAATGTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CAA 72 bp | TTTAACCACAGTGAGACATCAGTGATACTAAGGACATaGTCTACAAACCAAAATATCACCAGGTCTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: FNHSETSVILRT*STNQNITRSCV Trigger: GACACAAGACCTGGTGATATTTTGGTTTGTAGACAATGTCCTTAGTATCACTGATGTCTCACTGTGGTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CAA 72 bp | GACACACCAGACCTTGTAATGACACACACAAGAGAGTaGTTGACAACCATGATGATTAAGCAATTAAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: DTPDLVMTHTRE*LTTMMIKQLRV Trigger: AACTCTTAATTGCTTAATCATCATGGTTGTCAACAACTCTCTTGTGTGTGTCATTACAAGGTCTGGTGTGTC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR GCA 90 bp | ACCTATCAATACAGCATGCTGTCTTTCAGGAATGTTGTCCTAAGTTATATGTTGCATCACCTTGAGAAATaGCCTCTTGATGTCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: TYQYSMLSFRNVVLSYMLHHLEK*PLDVFV Trigger: AACAAAGACATCAAGAGGGCATTTCTCAAGGTGATG...CAACATATAACTTAGGACAACATTCCTGAAAGACAGCATGCTGTATTGATAGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| 3UTR CAA 72 bp | ACACCAGACCTTGTAATGACACACACAAGAGAGTTGTaGACAACCATGATGATTAAGCAATTAAGAGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: TPDLVMTHTREL*TTMMIKQLRVV Trigger: TACAACTCTTAATTGCTTAATCATCATGGTTGTCAACAACTCTCTTGTGTGTGTCATTACAAGGTCTGGTGT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR CAA 90 bp | CACCAGGTCTTGTGTCATAAGCACAAAATCACAGTAATGGGAGGTGGACACAGGCTCAGAAACCCAACTTaGGTTTTGCCCTGGAATCAT | + |
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Preference number: 5 (lower is better) Translates to: HQVLCHKHKITVMGGGHRLRNPT*VLPWNH Trigger: ATGATTCCAGGGCAAAACCAAAGTTGGGTTTCTGAG...CCTGTGTCCACCTCCCATTACTGTGATTTTGTGCTTATGACACAAGACCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106360.3 |
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| CDS-3UTR CAA 90 bp | ATTGGACCCTGGCCACATACTGTGCACAAAATGAATCAAAATGCAAATGAAACTAGTAAAGGAGATGGTTaGAGAGTGAGCAAGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: IGPWPHTVHKMNQNANETSKGDG*RVSKKM Trigger: CATCTTCTTGCTCACTCTCAAACCATCTCCTTTACT...AGTTTCATTTGCATTTTGATTCATTTTGTGCACAGTATGTGGCCAGGGTCCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS-3UTR CAA 90 bp | AGTCACCTATCAATACAGCATGCTGTCTTTCAGGAATGTTGTCCTAAGTTATATAGTAAAGGAGATGGTTaGAGAGTGAGCAAGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: SHLSIQHAVFQECCPKLYSKGDG*RVSKKM Trigger: CATCTTCTTGCTCACTCTCAAACCATCTCCTTTACT...ATATAACTTAGGACAACATTCCTGAAAGACAGCATGCTGTATTGATAGGTGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS TCA 72 bp | GCAGACCAGCATGATGATGAGCCCATTGCCCAGGACTaGGCTCAGGTAGATGAGAAGAAAGACAATGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: ADQHDDEPIAQD*AQVDEKKDNEE Trigger: CTCTTCATTGTCTTTCTTCTCATCTACCTGAGCTCAGTCCTGGGCAATGGGCTCATCATCATGCTGGTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094831.2 ENSMUST00000106360.3 ENSMUST00000216589.2 |
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| CDS TCA 72 bp | TGTTGGTCGTGGGGTCACTGGAGAAGCCAATCAGGATaGACTCAGAAACCCAACTTTGGTTTTGCCCACTCA | + |
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Preference number: 6 (lower is better) Translates to: CWSWGHWRSQSG*TQKPNFGFAHS Trigger: TGAGTGGGCAAAACCAAAGTTGGGTTTCTGAGTTCATCCTGATTGGCTTCTCCAGTGACCCCACGACCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216589.2 |
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