Pregenerated sensors for OLFR1330 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073768Ensembl transcript IDs: ENSMUST00000094830.2, ENSMUST00000105035.3, ENSMUST00000106361.3
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGAGAAAGCCTTGCAGCGCCCCTCTGTGGACTTGATCTTGAGAATTaGCTTGGCAATACCAATGTAGGAGGCCACAATGAGGGAAATTGG | + |
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Preference number: 5 (lower is better) Translates to: RESLAAPLCGLDLEN*LGNTNVGGHNEGNW Trigger: CCAATTTCCCTCATTGTGGCCTCCTACATTGGTATTGCCAAGGCAATTCTCAAGATCAAGTCCACAGAGGGGCGCTGCAAGGCTTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094830.2 ENSMUST00000105035.3 ENSMUST00000106361.3 |
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| CDS TCA 90 bp | ACAATCACAAAAACACTCAATACAAAATCCACCATCTCAATAACATaGGTATCCATGCAAGCCAGGCTACGCACTGAAGGACCTTCACAG | + |
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Preference number: 5 (lower is better) Translates to: TITKTLNTKSTISIT*VSMQARLRTEGPSQ Trigger: CTGTGAAGGTCCTTCAGTGCGTAGCCTGGCTTGCATGGATACTCATGTTATTGAGATGGTGGATTTTGTATTGAGTGTTTTTGTGATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094830.2 ENSMUST00000105035.3 ENSMUST00000106361.3 |
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| CDS CCA 90 bp | AATTGCCTTGGCAATACCAATGTAGGAGGCCACAATGAGGGAAATTaGAATCACAATCACAAAAACACTCAATACAAAATCCACCATCTC | + |
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Preference number: 5 (lower is better) Translates to: NCLGNTNVGGHNEGN*NHNHKNTQYKIHHL Trigger: GAGATGGTGGATTTTGTATTGAGTGTTTTTGTGATTGTGATTCCAATTTCCCTCATTGTGGCCTCCTACATTGGTATTGCCAAGGCAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094830.2 ENSMUST00000105035.3 ENSMUST00000106361.3 |
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| CDS CCA 72 bp | AGAGTGAGATCTGCTTGTCTCTCTCAGGGGAGTAGCTaGAGTTGGGCCTCATGTAGATGTAAGTGGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RVRSACLSQGSS*SWASCRCKWLE Trigger: CTCCAGCCACTTACATCTACATGAGGCCCAACTCCAGCTACTCCCCTGAGAGAGACAAGCAGATCTCACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094830.2 ENSMUST00000105035.3 ENSMUST00000106361.3 |
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| CDS GCA 72 bp | CTTGCAGCGCCCCTCTGTGGACTTGATCTTGAGAATTaGCTTGGCAATACCAATGTAGGAGGCCACAATGAG | + |
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Preference number: 6 (lower is better) Translates to: LAAPLCGLDLEN*LGNTNVGGHNE Trigger: CTCATTGTGGCCTCCTACATTGGTATTGCCAAGGCAATTCTCAAGATCAAGTCCACAGAGGGGCGCTGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094830.2 ENSMUST00000105035.3 ENSMUST00000106361.3 |
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| CDS TCA 72 bp | TGTTGGTTGTGGGGTCGCTGGAGAAGCCAATCAGGATaGACTCAGAGACCCAACTTTGGTTCTGTCCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: CWLWGRWRSQSG*TQRPNFGSVLE Trigger: TTCTAGGACAGAACCAAAGTTGGGTCTCTGAGTTCATCCTGATTGGCTTCTCCAGCGACCCCACAACCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094830.2 ENSMUST00000105035.3 ENSMUST00000106361.3 |
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| CDS TCA 72 bp | CAACAAAGAAGGTGCACTCAGTTATACCCAGGGCACTaGAAACAAACATCTGCAGCCAGCAGCCAACAAAGG | + |
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Preference number: 6 (lower is better) Translates to: QQRRCTQLYPGH*KQTSAASSQQR Trigger: CCTTTGTTGGCTGCTGGCTGCAGATGTTTGTTTTCAGTGCCCTGGGTATAACTGAGTGCACCTTCTTTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094830.2 ENSMUST00000105035.3 ENSMUST00000106361.3 |
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| CDS TCA 72 bp | AATAACATGAGTATCCATGCAAGCCAGGCTACGCACTaGAGGACCTTCACAGAAGTAGTGGTTGACCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: NNMSIHASQATH*RTFTEVVVDPV Trigger: AACAGGGTCAACCACTACTTCTGTGAAGGTCCTTCAGTGCGTAGCCTGGCTTGCATGGATACTCATGTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094830.2 ENSMUST00000105035.3 ENSMUST00000106361.3 |
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| CDS TCA 72 bp | AGGGTTGAGCAAGGCTGTGAAGGTATTATAAAAGAGTaGGATCTGCTTGTCTCTCTCAGGGGAGTAGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RVEQGCEGIIKE*DLLVSLRGVAG Trigger: TCCAGCTACTCCCCTGAGAGAGACAAGCAGATCTCACTCTTTTATAATACCTTCACAGCCTTGCTCAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094830.2 ENSMUST00000105035.3 ENSMUST00000106361.3 |
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| CDS CCA 72 bp | AAACAAACATCTGCAGCCAGCAGCCAACAAAGGAGATaGTCTGAGAGTGAGCAAGAAGATGCACCAACATCT | + |
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Preference number: 6 (lower is better) Translates to: KQTSAASSQQRR*SESEQEDAPTS Trigger: AGATGTTGGTGCATCTTCTTGCTCACTCTCAGACCATCTCCTTTGTTGGCTGCTGGCTGCAGATGTTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094830.2 ENSMUST00000105035.3 ENSMUST00000106361.3 |
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| CDS TCA 72 bp | GAATTGCCTTGGCAATACCAATGTAGGAGGCCACAATaGGGGAAATTGGAATCACAATCACAAAAACACTCA | + |
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Preference number: 6 (lower is better) Translates to: ELPWQYQCRRPQ*GKLESQSQKHS Trigger: TGAGTGTTTTTGTGATTGTGATTCCAATTTCCCTCATTGTGGCCTCCTACATTGGTATTGCCAAGGCAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094830.2 ENSMUST00000105035.3 ENSMUST00000106361.3 |
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